MS017526 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTTTCGTCACACCTGCGGTTTCGTCAGCTTCTGCTCTCCCAAGAGTTTCGTTCCGAGCTCGCTCCGACCTGCATTTACAGAGCCGGTTTGCTTTCTCATCTATTGTTTCTACTAATTTTATCGTTTCAGTAGTTTTACATTCAATTTTGTTGCTCGCAATTTCGCGCGTTTTTCTCTTTCATGGCTTCGCGGTGCTCTCAAGTCTTTTAATGGCGTAACACGGCTCGAGTGGAGACCAAATCTGTTTGTAACTAGGGTTTGCTTTGTCGTCTCGTTTCCTATTTAAGTTCGTGCAGGTTTGGAGTAAGATGCCGCGTCGCGGACGCTCCAACTACTATAGATGTAGTGGCTGATGTTAGAAGTGAGAAGGTATACTCCGTGTTAGACCAATACATTTGAGTTTTCTTTTTGGTAATAAGTTCTGTCTGATGACTCTGATCCTCTCAGCAAATTGATCATTTCTCACTTATATGCTTGTGTGCTTTTTATCTTAGTAGGTTGTGGTCTTAGGAGGCAGCGGATTCGTTGGTTCTGCTATATGCAAAGCGGCGGTATCCAAGGGCATTGAAGTTGTTAGCGTGAGCAGGTCTTGTAAATAACTTAGAATTCCTCTATCTTTCTTCATGATCGGTTTGACCACATGCAGTTTCATTCGAACTTCATATAATGTGCAGGTCGGGTCGTCCAACAGATACAAGTTCATGGATAGATCAAGTTACTTGGGTTCCAGGCAAGTGCCTTTGGTGTGCCAGCACCATGGAATGTTTTATCAACTGTTGCGTCAGAAATTTTAGGCAGTAGGTAAAATATAGAATATTGAATTATCTTGAATAAAAAGATGAAATAGGTGCTGCTTCAATGGCCTACATGTTACAATCCTTTTTTTTCCAATCATCTTGATTTGGCCCTGTGAAGTGAGAAAACCCTGTATTTACTTGTGAAGATTTGTATGCGTGGGGATCACGGAAAAAGGATAAATAATTTGCTCGAGGAAAAAAATGTCAACTGAGGAGATCTGTATTAGGGAGATGTGGGGAGGAATGTTTGCTAAAAATGTCATTTTAGGGGCGATGTGATTTCGATCTCAAACTTTTGCACCTTTTGATATCTAAAGAAATAAGGGAATTCCCGATGTATAAGCATAAAGATCAAAGGAGTTACAATAGAGATTCCCAGGGCTGTTCTCAGATGGAAAGAATAAATAATGTAAAGTCTCATTTTGGTATCCTCTCACACCTATGTTCTAATCTCCAATGACAATATTAATTGGAAACGTGAGACAAAACTCAATCTCTTGTTGTAATAGATTGGTAAAGGTAAAAGGAACTGCTTTGTTTGAAATTGACCATATTTCATTTTGCCTGAACTTGATAATTGGAATTAAAATGTTCACTGTTTAGAAATTATTGGCACCTTTCTCATTGTGGGTGCAAATAGTTCTTTAGGAATGGTCATTGCTGAATCATATGTACACAAATAATTAGCTCTTCGCATTCATATATTGTCTACATCTTTATAGACTTTTTTTGCATTTGAATATTTTGAGCAACACAATATTACCTTATTTAGATTCCATAGGCCACAATGAGATTGAAAATGACTGACAAAGTGCTAGGCTGTTGGTAAGTTGCATGAGCAGGTGGGGTCCTTAATAAGGGTTTGATGTATTTTTGCCCAGAGAACTCTCAGGACATGTTTTGCCTCCTCCTCTACCTGAGTGTGTGTGTGTGTTTTTTTTTAAAATTATTTATGGTCTCTGGTGTGTCCATAGCTAGTATTCTGAATGAATCTAGGTAGTCTTATACTTTGTGGCATTCAATCTATAGCTATAGAAAAAGTTTAGGAAGCTTGTACTTGATTGTTATGACTTATGAATGAGCTATAGTCGCATCCTATTAGAAAATAAATACTCCTTCTCTTCTCTGTTCACGAGGGTATGAAAGATTCACTTTACAATATTCAGGAGATGTTTTCTACGTCAACTGGGATGACATACTTGTTGGGGCTACGGCAGTGGTATCAACGCTCGGAGGTTTTGGCAGTGAGGAACAGATGAAAAGAATTAATGGCGAGGCCAATGTTGTGGCTGTGAATGCGGCTTATGATTTTGGTAAGCAATTTTTAGATTGCACATTGTAATGAGACAAAAATATCAACTGTCATTAATCCTGCTCCTATGTCCACAAGTCTGTAACCCAATCACCCTGAGGTTTTCTATATAAAATTCCTGTTGCTCTGATTGACTTATTGTTATTTTTATCATCGGGTTTGGGTACATTACTTATTGCACCATTCTGAAGATTTTTTCTCGTGGCAGGAATTCCCAAGTTCGTCTTAATATCAGTCCATGATTACAATTTTCCTTCATTTCTACTCTCATCTGGATACTTCACTGGAAAAAGGCAAGCAGAGTCCGAGGTCCTCTCCAAATTTCCAAGATCTGGTAATTTTCTACACATCTTTCAATTTTTTAAAAGACTGAAACTTAGGTCCTTATTTGCCTACAAATAATATGGAACTTGGAGGTCTTTGTTTTTATTCAAAGTATTTTAAGTGAAAATTATTTCACTTAAAATACTTTGACTTGAAGACAATCATCCCTTAGTCCTCAAAGTGTTACTGTTGAAAACCGAGAAGGCCGATACGTCTAGGAAGTATTTCCTGTCAACTTATCCAACTATCCAAAAACTGTCTTTAAGGTATTATAAAAAACTAAATTTACCTGTCAACTTATCCAACTATCCAAAAACTGTCTTTAAGGTATTATAAAAAACTAAATTTACCGTAATCTAACAAACTTTTGGGTTGATTGGTTATTTAACATGGTACCATAGCATGAGATTATGTGTTCATGTGTTCGAACTCTGATTTCCTCTCCATTTAATGTTGACTGCGACTTGTTGGCCTTGTGCAAATTTTCAAGTTACAAGTGAGCGGAGGGTTAAGGTATCAATAAAAGACTTAAATTATCGTAATCCATCTAGATTAAGTTATTGGGTTAATTGGTGATTTATCCTAGTTAATCAGCCTTTGGTCAACCTTTGGCTTTTGTTCTTGTAAGATGTTCCTCATCTGAACGGTTAACATAAAAGGAGGTTACATTTTCCAAAAAAGCAGTCAATTCTCTCCGTGCAACATTTTCCATTGACTTGCAGGTGTTGTACTCCGTCCCGCTTTCATATATGGGAAAAGGAGGGTGAATGATTTTGAGATTCCCCTGAATCTGGTTGGAGAACCAGTGGAAAAATTTCTATCAACCTTTGGAAACTTCATTAAACCTCTAAGTTCCCTTCCAGCCTCTGACGTTTTTCTTGCCCCTCCGGTCAGCGTCGACGACGTGGCGCTTGCTACTGTCAACGCAATCACCGACGACGATTTTTTTGGTGTTTTCACAATTGAACAGATCAAGGAAGCTGCAGCAAAAGTTAGAGCG ATTTTCGTCACACCTGCGGTTTCGTCAGCTTCTGCTCTCCCAAGAGTTTCGTTCCGAGCTCGCTCCGACCTGCATTTACAGAGCCGTTCGTGCAGGTTTGGAGTAAGATGCCGCGTCGCGGACGCTCCAACTACTATAGATGTAGTGGCTGATGTTAGAAGTGAGAAGGTTGTGGTCTTAGGAGGCAGCGGATTCGTTGGTTCTGCTATATGCAAAGCGGCGGTATCCAAGGGCATTGAAGTTGTTAGCGTGAGCAGGTCGGGTCGTCCAACAGATACAAGTTCATGGATAGATCAAGTTACTTGGGTTCCAGGCAAATTCACTTTACAATATTCAGGAGATGTTTTCTACGTCAACTGGGATGACATACTTGTTGGGGCTACGGCAGTGGTATCAACGCTCGGAGGTTTTGGCAGTGAGGAACAGATGAAAAGAATTAATGGCGAGGCCAATGTTGTGGCTGTGAATGCGGCTTATGATTTTGGAATTCCCAAGTTCGTCTTAATATCAGTCCATGATTACAATTTTCCTTCATTTCTACTCTCATCTGGATACTTCACTGGAAAAAGGCAAGCAGAGTCCGAGGTCCTCTCCAAATTTCCAAGATCTGGTGTTGTACTCCGTCCCGCTTTCATATATGGGAAAAGGAGGGTGAATGATTTTGAGATTCCCCTGAATCTGGTTGGAGAACCAGTGGAAAAATTTCTATCAACCTTTGGAAACTTCATTAAACCTCTAAGTTCCCTTCCAGCCTCTGACGTTTTTCTTGCCCCTCCGGTCAGCGTCGACGACGTGGCGCTTGCTACTGTCAACGCAATCACCGACGACGATTTTTTTGGTGTTTTCACAATTGAACAGATCAAGGAAGCTGCAGCAAAAGTTAGAGCG ATTTTCGTCACACCTGCGGTTTCGTCAGCTTCTGCTCTCCCAAGAGTTTCGTTCCGAGCTCGCTCCGACCTGCATTTACAGAGCCGTTCGTGCAGGTTTGGAGTAAGATGCCGCGTCGCGGACGCTCCAACTACTATAGATGTAGTGGCTGATGTTAGAAGTGAGAAGGTTGTGGTCTTAGGAGGCAGCGGATTCGTTGGTTCTGCTATATGCAAAGCGGCGGTATCCAAGGGCATTGAAGTTGTTAGCGTGAGCAGGTCGGGTCGTCCAACAGATACAAGTTCATGGATAGATCAAGTTACTTGGGTTCCAGGCAAATTCACTTTACAATATTCAGGAGATGTTTTCTACGTCAACTGGGATGACATACTTGTTGGGGCTACGGCAGTGGTATCAACGCTCGGAGGTTTTGGCAGTGAGGAACAGATGAAAAGAATTAATGGCGAGGCCAATGTTGTGGCTGTGAATGCGGCTTATGATTTTGGAATTCCCAAGTTCGTCTTAATATCAGTCCATGATTACAATTTTCCTTCATTTCTACTCTCATCTGGATACTTCACTGGAAAAAGGCAAGCAGAGTCCGAGGTCCTCTCCAAATTTCCAAGATCTGGTGTTGTACTCCGTCCCGCTTTCATATATGGGAAAAGGAGGGTGAATGATTTTGAGATTCCCCTGAATCTGGTTGGAGAACCAGTGGAAAAATTTCTATCAACCTTTGGAAACTTCATTAAACCTCTAAGTTCCCTTCCAGCCTCTGACGTTTTTCTTGCCCCTCCGGTCAGCGTCGACGACGTGGCGCTTGCTACTGTCAACGCAATCACCGACGACGATTTTTTTGGTGTTTTCACAATTGAACAGATCAAGGAAGCTGCAGCAAAAGTTAGAGCG IFVTPAVSSASALPRVSFRARSDLHLQSRSCRFGVRCRVADAPTTIDVVADVRSEKVVVLGGSGFVGSAICKAAVSKGIEVVSVSRSGRPTDTSSWIDQVTWVPGKFTLQYSGDVFYVNWDDILVGATAVVSTLGGFGSEEQMKRINGEANVVAVNAAYDFGIPKFVLISVHDYNFPSFLLSSGYFTGKRQAESEVLSKFPRSGVVLRPAFIYGKRRVNDFEIPLNLVGEPVEKFLSTFGNFIKPLSSLPASDVFLAPPVSVDDVALATVNAITDDDFFGVFTIEQIKEAAAKVRA Homology
BLAST of MS017526 vs. NCBI nr
Match: XP_022159503.1 (uncharacterized protein At1g32220, chloroplastic isoform X1 [Momordica charantia]) HSP 1 Score: 554.3 bits (1427), Expect = 6.4e-154 Identity = 287/296 (96.96%), Postives = 287/296 (96.96%), Query Frame = 0
BLAST of MS017526 vs. NCBI nr
Match: XP_022159504.1 (uncharacterized protein At1g32220, chloroplastic isoform X2 [Momordica charantia]) HSP 1 Score: 542.0 bits (1395), Expect = 3.3e-150 Identity = 284/296 (95.95%), Postives = 284/296 (95.95%), Query Frame = 0
BLAST of MS017526 vs. NCBI nr
Match: XP_038887314.1 (uncharacterized protein At1g32220, chloroplastic [Benincasa hispida]) HSP 1 Score: 500.7 bits (1288), Expect = 8.4e-138 Identity = 259/303 (85.48%), Postives = 272/303 (89.77%), Query Frame = 0
BLAST of MS017526 vs. NCBI nr
Match: XP_004136203.1 (uncharacterized protein At1g32220, chloroplastic [Cucumis sativus] >KGN60353.1 hypothetical protein Csa_002008 [Cucumis sativus]) HSP 1 Score: 488.4 bits (1256), Expect = 4.3e-134 Identity = 250/303 (82.51%), Postives = 270/303 (89.11%), Query Frame = 0
BLAST of MS017526 vs. NCBI nr
Match: XP_008466013.1 (PREDICTED: uncharacterized protein At1g32220, chloroplastic [Cucumis melo] >KAA0038553.1 NAD(P)-binding Rossmann-fold superfamily protein isoform 1 [Cucumis melo var. makuwa] >TYK31191.1 NAD(P)-binding Rossmann-fold superfamily protein isoform 1 [Cucumis melo var. makuwa]) HSP 1 Score: 484.6 bits (1246), Expect = 6.2e-133 Identity = 246/303 (81.19%), Postives = 271/303 (89.44%), Query Frame = 0
BLAST of MS017526 vs. ExPASy Swiss-Prot
Match: Q9FVR6 (Uncharacterized protein At1g32220, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g32220 PE=1 SV=1) HSP 1 Score: 386.7 bits (992), Expect = 2.3e-106 Identity = 196/287 (68.29%), Postives = 233/287 (81.18%), Query Frame = 0
BLAST of MS017526 vs. ExPASy Swiss-Prot
Match: Q05892 (MIOREX complex component 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=COQ11 PE=1 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 3.3e-12 Identity = 77/290 (26.55%), Postives = 126/290 (43.45%), Query Frame = 0
BLAST of MS017526 vs. ExPASy Swiss-Prot
Match: O74482 (Uncharacterized protein C1840.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC1840.09 PE=3 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 5.7e-12 Identity = 76/283 (26.86%), Postives = 107/283 (37.81%), Query Frame = 0
BLAST of MS017526 vs. ExPASy TrEMBL
Match: A0A6J1DZ00 (uncharacterized protein At1g32220, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025901 PE=4 SV=1) HSP 1 Score: 554.3 bits (1427), Expect = 3.1e-154 Identity = 287/296 (96.96%), Postives = 287/296 (96.96%), Query Frame = 0
BLAST of MS017526 vs. ExPASy TrEMBL
Match: A0A6J1E2J9 (uncharacterized protein At1g32220, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111025901 PE=4 SV=1) HSP 1 Score: 542.0 bits (1395), Expect = 1.6e-150 Identity = 284/296 (95.95%), Postives = 284/296 (95.95%), Query Frame = 0
BLAST of MS017526 vs. ExPASy TrEMBL
Match: A0A0A0LEZ2 (NAD(P)-bd_dom domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G900980 PE=4 SV=1) HSP 1 Score: 488.4 bits (1256), Expect = 2.1e-134 Identity = 250/303 (82.51%), Postives = 270/303 (89.11%), Query Frame = 0
BLAST of MS017526 vs. ExPASy TrEMBL
Match: A0A5A7T6K0 (NAD(P)-binding Rossmann-fold superfamily protein isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004750 PE=4 SV=1) HSP 1 Score: 484.6 bits (1246), Expect = 3.0e-133 Identity = 246/303 (81.19%), Postives = 271/303 (89.44%), Query Frame = 0
BLAST of MS017526 vs. ExPASy TrEMBL
Match: A0A1S3CRP4 (uncharacterized protein At1g32220, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503573 PE=4 SV=1) HSP 1 Score: 484.6 bits (1246), Expect = 3.0e-133 Identity = 246/303 (81.19%), Postives = 271/303 (89.44%), Query Frame = 0
BLAST of MS017526 vs. TAIR 10
Match: AT1G32220.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 386.7 bits (992), Expect = 1.6e-107 Identity = 196/287 (68.29%), Postives = 233/287 (81.18%), Query Frame = 0
BLAST of MS017526 vs. TAIR 10
Match: AT5G10730.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 185.7 bits (470), Expect = 5.6e-47 Identity = 101/225 (44.89%), Postives = 138/225 (61.33%), Query Frame = 0
BLAST of MS017526 vs. TAIR 10
Match: AT5G15910.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 178.3 bits (451), Expect = 8.9e-45 Identity = 103/237 (43.46%), Postives = 141/237 (59.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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