MS017510 (gene) Bitter gourd (TR) v1

Overview


Name	MS017510
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	TPR_REGION domain-containing protein
Location	scaffold373: 155871 .. 156952 (+)
RNA-Seq Expression	MS017510
Synteny	MS017510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATCTGCTCTCGCCAGAACCGGTTCCGTTCCGGTCATCTCCCCGGCCGGAGCCCCTTCTCCCTCCTTCTCCAATTACAGGCCATTTCACAAGAGCTACGTTTCGTCCCCGAAGATCTCCCTGCATTTTGAGATCAATCACCGCAGGGGAGCGAAATCGAGCGGTATTCGAAGGGCTTCATCGGAGAGTGATATCGCGCGATCGCTGCACCAGATTTCGAATCGATATGATCAACTGGGTGGAGTCGGATCTCGGTCCTTCCCTTCCGGAATTCCCGAGGATGAGTTTTTGAACGAAAGTCGAGACGCTGTTGCGGAGGAGTGGATAATTCAGGAGGACGAGGATGAATTTGACATCTCTAATTATGCCGGTGATTTCTCTGGAGGCGCTATTTCGATGAAGAACGCCGGTTTCTTCGGTTCCGGAATCGGTAGCGGCGGCAATATTGTTACGGATACATTTTCCGGCGGAAGTAGCGACCGCAGTAAGATCGGAGCGTACTACGAAGAGATGTTGAAATTGAACCCTAGCGATTCTCTTTTACTGAGAAACTATGGCAAATTCTTGCACGAGGTAATTGGGAATTAGAAGATTATCATCTGACGAAAGCCTCGTTCGATTTGATGTAGCGACTCTAACACTTTAATTTGTTTGATCGATCATATGAAGGTGGAGAACGATGCGGTACGAGCAGAGGAATTCTATGGCAGAGCGATATTGGCGAGTCCAGGAGACGGAGAATTGTTGTCTCTGTACGGAAAATTGGTATGGGAGACTCAAAGAGACGAACAAAGAGCTAAATCTTACTTCGATCGCGCCGTCTACGCCTCCCCTGACGACTGGTAATTCCCGATATCTCAATCTAGCCCTAATAATTTCAACCATTATCAATTATAGCATTTCCACAATTCTCAATCGATCTGATTTGTCAATTTATCTTGCGTAGTTCGGTGTTGGGATCGTACGCCCATTTCTTATGGGAAGTTGAAGCAGATGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGCAGCAGCAGCAGAGAAGGCAGAGGTACCTCCGGCGGCTCTCGTAGCGGCATTT

mRNA sequence

ATGAAATCTGCTCTCGCCAGAACCGGTTCCGTTCCGGTCATCTCCCCGGCCGGAGCCCCTTCTCCCTCCTTCTCCAATTACAGGCCATTTCACAAGAGCTACGTTTCGTCCCCGAAGATCTCCCTGCATTTTGAGATCAATCACCGCAGGGGAGCGAAATCGAGCGGTATTCGAAGGGCTTCATCGGAGAGTGATATCGCGCGATCGCTGCACCAGATTTCGAATCGATATGATCAACTGGGTGGAGTCGGATCTCGGTCCTTCCCTTCCGGAATTCCCGAGGATGAGTTTTTGAACGAAAGTCGAGACGCTGTTGCGGAGGAGTGGATAATTCAGGAGGACGAGGATGAATTTGACATCTCTAATTATGCCGGTGATTTCTCTGGAGGCGCTATTTCGATGAAGAACGCCGGTTTCTTCGGTTCCGGAATCGGTAGCGGCGGCAATATTGTTACGGATACATTTTCCGGCGGAAGTAGCGACCGCAGTAAGATCGGAGCGTACTACGAAGAGATGTTGAAATTGAACCCTAGCGATTCTCTTTTACTGAGAAACTATGGCAAATTCTTGCACGAGGTGGAGAACGATGCGGTACGAGCAGAGGAATTCTATGGCAGAGCGATATTGGCGAGTCCAGGAGACGGAGAATTGTTGTCTCTGTACGGAAAATTGGTATGGGAGACTCAAAGAGACGAACAAAGAGCTAAATCTTACTTCGATCGCGCCGTCTACGCCTCCCCTGACGACTGTTCGGTGTTGGGATCGTACGCCCATTTCTTATGGGAAGTTGAAGCAGATGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGCAGCAGCAGCAGAGAAGGCAGAGGTACCTCCGGCGGCTCTCGTAGCGGCATTT

Coding sequence (CDS)

ATGAAATCTGCTCTCGCCAGAACCGGTTCCGTTCCGGTCATCTCCCCGGCCGGAGCCCCTTCTCCCTCCTTCTCCAATTACAGGCCATTTCACAAGAGCTACGTTTCGTCCCCGAAGATCTCCCTGCATTTTGAGATCAATCACCGCAGGGGAGCGAAATCGAGCGGTATTCGAAGGGCTTCATCGGAGAGTGATATCGCGCGATCGCTGCACCAGATTTCGAATCGATATGATCAACTGGGTGGAGTCGGATCTCGGTCCTTCCCTTCCGGAATTCCCGAGGATGAGTTTTTGAACGAAAGTCGAGACGCTGTTGCGGAGGAGTGGATAATTCAGGAGGACGAGGATGAATTTGACATCTCTAATTATGCCGGTGATTTCTCTGGAGGCGCTATTTCGATGAAGAACGCCGGTTTCTTCGGTTCCGGAATCGGTAGCGGCGGCAATATTGTTACGGATACATTTTCCGGCGGAAGTAGCGACCGCAGTAAGATCGGAGCGTACTACGAAGAGATGTTGAAATTGAACCCTAGCGATTCTCTTTTACTGAGAAACTATGGCAAATTCTTGCACGAGGTGGAGAACGATGCGGTACGAGCAGAGGAATTCTATGGCAGAGCGATATTGGCGAGTCCAGGAGACGGAGAATTGTTGTCTCTGTACGGAAAATTGGTATGGGAGACTCAAAGAGACGAACAAAGAGCTAAATCTTACTTCGATCGCGCCGTCTACGCCTCCCCTGACGACTGTTCGGTGTTGGGATCGTACGCCCATTTCTTATGGGAAGTTGAAGCAGATGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGCAGCAGCAGCAGAGAAGGCAGAGGTACCTCCGGCGGCTCTCGTAGCGGCATTT

Protein sequence

MKSALARTGSVPVISPAGAPSPSFSNYRPFHKSYVSSPKISLHFEINHRRGAKSSGIRRASSESDIARSLHQISNRYDQLGGVGSRSFPSGIPEDEFLNESRDAVAEEWIIQEDEDEFDISNYAGDFSGGAISMKNAGFFGSGIGSGGNIVTDTFSGGSSDRSKIGAYYEEMLKLNPSDSLLLRNYGKFLHEVENDAVRAEEFYGRAILASPGDGELLSLYGKLVWETQRDEQRAKSYFDRAVYASPDDCSVLGSYAHFLWEVEADEEEEEEEEEEAAAAEKAEVPPAALVAAF

Homology

[Close]

BLAST of MS017510 vs. NCBI nr
Match: XP_022156684.1 (uncharacterized protein LOC111023531 [Momordica charantia])

HSP 1 Score: 559.3 bits (1440), Expect = 2.0e-155
Identity = 293/294 (99.66%), Postives = 293/294 (99.66%), Query Frame = 0


Query: 1   MKSALARTGSVPVISPAGAPSPSFSNYRPFHKSYVSSPKISLHFEINHRRGAKSSGIRRA 60
           MKSALARTGSVPVISPAGAPSPSFSNYRPFHKSYVSSPKISLHFEINHRRGAKSSGIRRA
Sbjct: 1   MKSALARTGSVPVISPAGAPSPSFSNYRPFHKSYVSSPKISLHFEINHRRGAKSSGIRRA 60

Query: 61  SSESDIARSLHQISNRYDQLGGVGSRSFPSGIPEDEFLNESRDAVAEEWIIQEDEDEFDI 120
           SSESDIARSLHQISNRYDQLGGVGSRSFPSGIPEDEFLNESRDAVAEEWIIQEDEDEFDI
Sbjct: 61  SSESDIARSLHQISNRYDQLGGVGSRSFPSGIPEDEFLNESRDAVAEEWIIQEDEDEFDI 120

Query: 121 SNYAGDFSGGAISMKNAGFFGSGIGSGGNIVTDTFSGGSSDRSKIGAYYEEMLKLNPSDS 180
           SNYAGDFSGGAISMKNAGFFGSGIGSGGNIVTDTFSGGSSDRSKIGAYYEEMLKLNPSDS
Sbjct: 121 SNYAGDFSGGAISMKNAGFFGSGIGSGGNIVTDTFSGGSSDRSKIGAYYEEMLKLNPSDS 180

Query: 181 LLLRNYGKFLHEVENDAVRAEEFYGRAILASPGDGELLSLYGKLVWETQRDEQRAKSYFD 240
           LLLRNYGKFLHEVENDAVRAEEFYGRAILASPGDGELLSLYGKLVWETQRDEQRAKSYFD
Sbjct: 181 LLLRNYGKFLHEVENDAVRAEEFYGRAILASPGDGELLSLYGKLVWETQRDEQRAKSYFD 240

Query: 241 RAVYASPDDCSVLGSYAHFLWEVEADEEEEEEEEEEAAAAEKAEVPPAALVAAF 295
           RAVYASPDDCSVLGSYAHFLWEVEAD EEEEEEEEEAAAAEKAEVPPAALVAAF
Sbjct: 241 RAVYASPDDCSVLGSYAHFLWEVEAD-EEEEEEEEEAAAAEKAEVPPAALVAAF 293

[Close]

BLAST of MS017510 vs. NCBI nr
Match: XP_022930988.1 (uncharacterized protein LOC111437316 [Cucurbita moschata] >KAG7036203.1 hypothetical protein SDJN02_03004 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 313.2 bits (801), Expect = 2.5e-81
Identity = 185/306 (60.46%), Postives = 214/306 (69.93%), Query Frame = 0


Query: 1   MKSALARTGSVPVISPAGAPSPSFSNYRPF------HKSYVSSPKISLHFEINHRRGAKS 60
           MKSAL RT S+PVI P+G  S SFSNYRP       HKS VSSPKISLHFE+N+ RG  S
Sbjct: 1   MKSALLRTVSIPVIWPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLHFEMNNPRGRNS 60

Query: 61  SGIRRASSESDIARSLHQISNRYDQLGGVGS----RSFPSGIPEDEFLNESRDAVAEEWI 120
           SGIRRASSESDI+RSLH++SN YDQ GGVGS    RS  S IPE+EFLN           
Sbjct: 61  SGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLN----------- 120

Query: 121 IQEDEDEFDISNYAGDFSGGAISMKNAGFFGSGIG--SGGNIVTDTFSGGSSDRSKIGAY 180
               +DEFD  +   D          +G   SGIG   G    TDTF  GS+DR+KIGAY
Sbjct: 121 ----QDEFDSDSMEDD----------SGCLDSGIGCSDGAEFFTDTFYDGSNDRNKIGAY 180

Query: 181 YEEMLKLNPSDSLLLRNYGKFLHEVENDAVRAEEFYGRAILASPGDGELLSLYGKLVWET 240
           YEE+LKLNP+D+LLLRNYGKFLHEVE D VR+EE Y RAILA+P DGELL+LYGKLVWE+
Sbjct: 181 YEELLKLNPNDALLLRNYGKFLHEVEKDHVRSEECYSRAILANPSDGELLALYGKLVWES 240

Query: 241 QRDEQRAKSYFDRAVYASPDDCSVLGSYAHFLWEVEADEEEEEEEEEEAAAAEKAEVPPA 295
            +D+QRA+ YFDRAV ASP+DC V+G YA+FLW++E DEEE           E AEV PA
Sbjct: 241 HKDKQRAEYYFDRAVRASPNDCLVIGYYAYFLWQIEDDEEE-----------EAAEVWPA 270

[Close]

BLAST of MS017510 vs. NCBI nr
Match: KAG6606262.1 (hypothetical protein SDJN03_03579, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 311.2 bits (796), Expect = 9.4e-81
Identity = 185/306 (60.46%), Postives = 213/306 (69.61%), Query Frame = 0


Query: 1   MKSALARTGSVPVISPAGAPSPSFSNYRPF------HKSYVSSPKISLHFEINHRRGAKS 60
           MKSAL RT S+PVI P+G  S SFSNYRP       HKS VSSPKISLHFE+N+ RG  S
Sbjct: 1   MKSALLRTVSIPVIWPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLHFEMNNPRGRNS 60

Query: 61  SGIRRASSESDIARSLHQISNRYDQLGGVGS----RSFPSGIPEDEFLNESRDAVAEEWI 120
           SGIRRASSESDI+RSLH++SN YDQ GGVGS    RS  S IPE+EFLN           
Sbjct: 61  SGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLN----------- 120

Query: 121 IQEDEDEFDISNYAGDFSGGAISMKNAGFFGSGIG--SGGNIVTDTFSGGSSDRSKIGAY 180
                DEFD  +   D          +G   SGIG   G    TDTF  GS+DR+KIGAY
Sbjct: 121 ----LDEFDSDSMEDD----------SGCLDSGIGCSDGAEFFTDTFYDGSNDRNKIGAY 180

Query: 181 YEEMLKLNPSDSLLLRNYGKFLHEVENDAVRAEEFYGRAILASPGDGELLSLYGKLVWET 240
           YEE+LKLNP+D+LLLRNYGKFLHEVE D VR+EE Y RAILA+P DGELL+LYGKLVWE+
Sbjct: 181 YEELLKLNPNDALLLRNYGKFLHEVEKDHVRSEECYSRAILANPSDGELLALYGKLVWES 240

Query: 241 QRDEQRAKSYFDRAVYASPDDCSVLGSYAHFLWEVEADEEEEEEEEEEAAAAEKAEVPPA 295
            +D+QRA+ YFDRAV ASP+DC V+G YA+FLW++E DEEE           E AEV PA
Sbjct: 241 HKDKQRAEYYFDRAVRASPNDCLVIGYYAYFLWQIEDDEEE-----------EAAEVWPA 270

[Close]

BLAST of MS017510 vs. NCBI nr
Match: XP_023532088.1 (uncharacterized protein LOC111794359 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308.5 bits (789), Expect = 6.1e-80
Identity = 182/306 (59.48%), Postives = 213/306 (69.61%), Query Frame = 0


Query: 1   MKSALARTGSVPVISPAGAPSPSFSNYRPF------HKSYVSSPKISLHFEINHRRGAKS 60
           MKSAL RT S+PVI P+G  S SFSNYRP       HKS VSSPKISLHFE+N+ RG  S
Sbjct: 1   MKSALLRTVSIPVIWPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLHFEMNNPRGRNS 60

Query: 61  SGIRRASSESDIARSLHQISNRYDQLGGVGS----RSFPSGIPEDEFLNESRDAVAEEWI 120
           SGIRRASSESDI+RSLH++SN YDQ GGVGS    RS  S IPE+EFLN           
Sbjct: 61  SGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLN----------- 120

Query: 121 IQEDEDEFDISNYAGDFSGGAISMKNAGFFGSGIG--SGGNIVTDTFSGGSSDRSKIGAY 180
               +DEFD  +   D          +G   +GIG   G    TD F  GS+DR+KIGAY
Sbjct: 121 ----QDEFDSDSMEDD----------SGCLDNGIGCSDGAEFFTDMFYDGSNDRNKIGAY 180

Query: 181 YEEMLKLNPSDSLLLRNYGKFLHEVENDAVRAEEFYGRAILASPGDGELLSLYGKLVWET 240
           YEE+LKLNP+D+LLLRNYGKFLHEVE D VR+EE Y RAILA+P DGELL+LYGKLVWE+
Sbjct: 181 YEELLKLNPNDALLLRNYGKFLHEVEKDHVRSEECYSRAILANPSDGELLALYGKLVWES 240

Query: 241 QRDEQRAKSYFDRAVYASPDDCSVLGSYAHFLWEVEADEEEEEEEEEEAAAAEKAEVPPA 295
            +D+QRA+ YFDRAV ASP+DC V+G YA+FLW++E DEE+           E AEV PA
Sbjct: 241 HKDKQRAEYYFDRAVRASPNDCLVIGYYAYFLWQIEDDEEQ-----------EAAEVWPA 270

[Close]

BLAST of MS017510 vs. NCBI nr
Match: XP_022995940.1 (uncharacterized protein LOC111491305 [Cucurbita maxima])

HSP 1 Score: 308.5 bits (789), Expect = 6.1e-80
Identity = 183/306 (59.80%), Postives = 213/306 (69.61%), Query Frame = 0


Query: 1   MKSALARTGSVPVISPAGAPSPSFSNYRPF------HKSYVSSPKISLHFEINHRRGAKS 60
           MKSAL RT S+PVISP+G  S SFSNYRP       HKS VSSPKISL FE+N+ RG  S
Sbjct: 1   MKSALFRTVSIPVISPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLLFEMNNPRGRNS 60

Query: 61  SGIRRASSESDIARSLHQISNRYDQLGGVGS----RSFPSGIPEDEFLNESRDAVAEEWI 120
           SGIRR SSESDI+RSLH++SN YDQ GGVGS    RS  S IPE+EFLN           
Sbjct: 61  SGIRRVSSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLN----------- 120

Query: 121 IQEDEDEFDISNYAGDFSGGAISMKNAGFFGSGIG--SGGNIVTDTFSGGSSDRSKIGAY 180
               +DEFD  +   D          +G   SGIG   G    TDTF  GS+DR+KIGAY
Sbjct: 121 ----QDEFDSDSMEED----------SGCLDSGIGCSDGAEFFTDTFYDGSNDRNKIGAY 180

Query: 181 YEEMLKLNPSDSLLLRNYGKFLHEVENDAVRAEEFYGRAILASPGDGELLSLYGKLVWET 240
           YEE+LKLNP+D+LLLRNYGKFLHEVE D VR+EE Y RAILA+P DGELL+LYGKLVWE+
Sbjct: 181 YEELLKLNPNDALLLRNYGKFLHEVEKDHVRSEECYSRAILANPSDGELLALYGKLVWES 240

Query: 241 QRDEQRAKSYFDRAVYASPDDCSVLGSYAHFLWEVEADEEEEEEEEEEAAAAEKAEVPPA 295
            +D+QRA+ YFDRAV ASP+DC V+G YA+FLW++E DEE+           E AEV PA
Sbjct: 241 HKDKQRAEYYFDRAVRASPNDCLVIGCYAYFLWQIEDDEEQ-----------EAAEVWPA 270

[Close]

BLAST of MS017510 vs. ExPASy TrEMBL
Match: A0A6J1DU99 (uncharacterized protein LOC111023531 OS=Momordica charantia OX=3673 GN=LOC111023531 PE=4 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 9.6e-156
Identity = 293/294 (99.66%), Postives = 293/294 (99.66%), Query Frame = 0


Query: 1   MKSALARTGSVPVISPAGAPSPSFSNYRPFHKSYVSSPKISLHFEINHRRGAKSSGIRRA 60
           MKSALARTGSVPVISPAGAPSPSFSNYRPFHKSYVSSPKISLHFEINHRRGAKSSGIRRA
Sbjct: 1   MKSALARTGSVPVISPAGAPSPSFSNYRPFHKSYVSSPKISLHFEINHRRGAKSSGIRRA 60

Query: 61  SSESDIARSLHQISNRYDQLGGVGSRSFPSGIPEDEFLNESRDAVAEEWIIQEDEDEFDI 120
           SSESDIARSLHQISNRYDQLGGVGSRSFPSGIPEDEFLNESRDAVAEEWIIQEDEDEFDI
Sbjct: 61  SSESDIARSLHQISNRYDQLGGVGSRSFPSGIPEDEFLNESRDAVAEEWIIQEDEDEFDI 120

Query: 121 SNYAGDFSGGAISMKNAGFFGSGIGSGGNIVTDTFSGGSSDRSKIGAYYEEMLKLNPSDS 180
           SNYAGDFSGGAISMKNAGFFGSGIGSGGNIVTDTFSGGSSDRSKIGAYYEEMLKLNPSDS
Sbjct: 121 SNYAGDFSGGAISMKNAGFFGSGIGSGGNIVTDTFSGGSSDRSKIGAYYEEMLKLNPSDS 180

Query: 181 LLLRNYGKFLHEVENDAVRAEEFYGRAILASPGDGELLSLYGKLVWETQRDEQRAKSYFD 240
           LLLRNYGKFLHEVENDAVRAEEFYGRAILASPGDGELLSLYGKLVWETQRDEQRAKSYFD
Sbjct: 181 LLLRNYGKFLHEVENDAVRAEEFYGRAILASPGDGELLSLYGKLVWETQRDEQRAKSYFD 240

Query: 241 RAVYASPDDCSVLGSYAHFLWEVEADEEEEEEEEEEAAAAEKAEVPPAALVAAF 295
           RAVYASPDDCSVLGSYAHFLWEVEAD EEEEEEEEEAAAAEKAEVPPAALVAAF
Sbjct: 241 RAVYASPDDCSVLGSYAHFLWEVEAD-EEEEEEEEEAAAAEKAEVPPAALVAAF 293

[Close]

BLAST of MS017510 vs. ExPASy TrEMBL
Match: A0A6J1EX26 (uncharacterized protein LOC111437316 OS=Cucurbita moschata OX=3662 GN=LOC111437316 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 1.2e-81
Identity = 185/306 (60.46%), Postives = 214/306 (69.93%), Query Frame = 0


Query: 1   MKSALARTGSVPVISPAGAPSPSFSNYRPF------HKSYVSSPKISLHFEINHRRGAKS 60
           MKSAL RT S+PVI P+G  S SFSNYRP       HKS VSSPKISLHFE+N+ RG  S
Sbjct: 1   MKSALLRTVSIPVIWPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLHFEMNNPRGRNS 60

Query: 61  SGIRRASSESDIARSLHQISNRYDQLGGVGS----RSFPSGIPEDEFLNESRDAVAEEWI 120
           SGIRRASSESDI+RSLH++SN YDQ GGVGS    RS  S IPE+EFLN           
Sbjct: 61  SGIRRASSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLN----------- 120

Query: 121 IQEDEDEFDISNYAGDFSGGAISMKNAGFFGSGIG--SGGNIVTDTFSGGSSDRSKIGAY 180
               +DEFD  +   D          +G   SGIG   G    TDTF  GS+DR+KIGAY
Sbjct: 121 ----QDEFDSDSMEDD----------SGCLDSGIGCSDGAEFFTDTFYDGSNDRNKIGAY 180

Query: 181 YEEMLKLNPSDSLLLRNYGKFLHEVENDAVRAEEFYGRAILASPGDGELLSLYGKLVWET 240
           YEE+LKLNP+D+LLLRNYGKFLHEVE D VR+EE Y RAILA+P DGELL+LYGKLVWE+
Sbjct: 181 YEELLKLNPNDALLLRNYGKFLHEVEKDHVRSEECYSRAILANPSDGELLALYGKLVWES 240

Query: 241 QRDEQRAKSYFDRAVYASPDDCSVLGSYAHFLWEVEADEEEEEEEEEEAAAAEKAEVPPA 295
            +D+QRA+ YFDRAV ASP+DC V+G YA+FLW++E DEEE           E AEV PA
Sbjct: 241 HKDKQRAEYYFDRAVRASPNDCLVIGYYAYFLWQIEDDEEE-----------EAAEVWPA 270

[Close]

BLAST of MS017510 vs. ExPASy TrEMBL
Match: A0A6J1K5B2 (uncharacterized protein LOC111491305 OS=Cucurbita maxima OX=3661 GN=LOC111491305 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 2.9e-80
Identity = 183/306 (59.80%), Postives = 213/306 (69.61%), Query Frame = 0


Query: 1   MKSALARTGSVPVISPAGAPSPSFSNYRPF------HKSYVSSPKISLHFEINHRRGAKS 60
           MKSAL RT S+PVISP+G  S SFSNYRP       HKS VSSPKISL FE+N+ RG  S
Sbjct: 1   MKSALFRTVSIPVISPSGTASSSFSNYRPLHGVFTGHKSSVSSPKISLLFEMNNPRGRNS 60

Query: 61  SGIRRASSESDIARSLHQISNRYDQLGGVGS----RSFPSGIPEDEFLNESRDAVAEEWI 120
           SGIRR SSESDI+RSLH++SN YDQ GGVGS    RS  S IPE+EFLN           
Sbjct: 61  SGIRRVSSESDISRSLHEVSNPYDQFGGVGSRSRTRSSHSEIPEEEFLN----------- 120

Query: 121 IQEDEDEFDISNYAGDFSGGAISMKNAGFFGSGIG--SGGNIVTDTFSGGSSDRSKIGAY 180
               +DEFD  +   D          +G   SGIG   G    TDTF  GS+DR+KIGAY
Sbjct: 121 ----QDEFDSDSMEED----------SGCLDSGIGCSDGAEFFTDTFYDGSNDRNKIGAY 180

Query: 181 YEEMLKLNPSDSLLLRNYGKFLHEVENDAVRAEEFYGRAILASPGDGELLSLYGKLVWET 240
           YEE+LKLNP+D+LLLRNYGKFLHEVE D VR+EE Y RAILA+P DGELL+LYGKLVWE+
Sbjct: 181 YEELLKLNPNDALLLRNYGKFLHEVEKDHVRSEECYSRAILANPSDGELLALYGKLVWES 240

Query: 241 QRDEQRAKSYFDRAVYASPDDCSVLGSYAHFLWEVEADEEEEEEEEEEAAAAEKAEVPPA 295
            +D+QRA+ YFDRAV ASP+DC V+G YA+FLW++E DEE+           E AEV PA
Sbjct: 241 HKDKQRAEYYFDRAVRASPNDCLVIGCYAYFLWQIEDDEEQ-----------EAAEVWPA 270

[Close]

BLAST of MS017510 vs. ExPASy TrEMBL
Match: A0A6J1HIV3 (uncharacterized protein LOC111463957 OS=Cucurbita moschata OX=3662 GN=LOC111463957 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 8.0e-78
Identity = 182/304 (59.87%), Postives = 208/304 (68.42%), Query Frame = 0


Query: 1   MKSALARTGSVPVISPAGAPSPSFSNYRPFH------KSYVSSPKISLHFEINHRRGAKS 60
           M+SAL RT SVPV+S A A S SFSNY+P +       S +SSPKISLHFEINHRRG   
Sbjct: 1   MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW 60

Query: 61  SGIRRASSESDIARSLHQISNRYDQLGGVGSR--SFPSGIPEDEFLNESRDAVAEEWIIQ 120
           SGIRRA+SESDI+RSLH++S+ YDQ GG  SR  S PS IPEDEFLN             
Sbjct: 61  SGIRRAASESDISRSLHEVSSPYDQFGGFRSRYWSVPSEIPEDEFLN------------- 120

Query: 121 EDEDEFDISNYAGDFSGGAISMKNAGFFGSGI--GSGGNIVTDTFSGGSSDRSKIGAYYE 180
             +DEF   ++A           +  F  SGI  G GG+ V D FS GSS+ SKI AYYE
Sbjct: 121 --QDEFHRDSFA-----------DTEFLNSGIVSGDGGDFVADKFSDGSSESSKIRAYYE 180

Query: 181 EMLKLNPSDSLLLRNYGKFLHEVENDAVRAEEFYGRAILASPGDGELLSLYGKLVWETQR 240
           EMLK NPSD+L+LRNYGKFLHEVE D+ RAEE Y RAILASP DGELL+LYGKLVW+TQR
Sbjct: 181 EMLKSNPSDALILRNYGKFLHEVEKDSKRAEECYSRAILASPRDGELLALYGKLVWDTQR 240

Query: 241 DEQRAKSYFDRAVYASPDDCSVLGSYAHFLWEVEADEEEEEEEEEEAAAAEKAEVPPAAL 295
           D++RA+ YFDRAV ASP+DC V+G YAHFLW VE DEEE         A   A  P  AL
Sbjct: 241 DKRRAQYYFDRAVCASPNDCLVIGYYAHFLWLVEDDEEE---------ATAVAPAPAPAL 269

[Close]

BLAST of MS017510 vs. ExPASy TrEMBL
Match: A0A6J1HRN2 (uncharacterized protein LOC111466874 OS=Cucurbita maxima OX=3661 GN=LOC111466874 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 2.6e-76
Identity = 182/305 (59.67%), Postives = 207/305 (67.87%), Query Frame = 0


Query: 1   MKSALARTGSVPVISPAGAPSPSFSNYRPFH------KSYVSSPKISLHFEINHRRGAKS 60
           M+SAL RT SVPV+S A A S SFSNY+P +       S +SSPKISLHFEINHRRG   
Sbjct: 1   MESALIRTVSVPVLSSAVAASSSFSNYKPLYGALSGQNSSISSPKISLHFEINHRRGKNW 60

Query: 61  SGIRRASSESDIARSLHQISNRYDQLGGVGSR--SFPSGIPEDEFLNESRDAVAEEWIIQ 120
           SGIRRA+SESDI+RSLH++S+ YDQ GG  SR  S PSGIPE+EFLN             
Sbjct: 61  SGIRRAASESDISRSLHEVSSPYDQFGGFRSRYWSVPSGIPEEEFLN------------- 120

Query: 121 EDEDEFDISNYAGDFSGGAISMKNAGFFGSGI--GSGGNIV-TDTFSGGSSDRSKIGAYY 180
             +DEF              S+ +  F  SGI  G GG+ V TD F+ GSS+ SKI AYY
Sbjct: 121 --QDEFHRD-----------SVADTEFLNSGIVSGDGGDFVATDKFTDGSSESSKIRAYY 180

Query: 181 EEMLKLNPSDSLLLRNYGKFLHEVENDAVRAEEFYGRAILASPGDGELLSLYGKLVWETQ 240
           EEMLK NPSD L+LRNYGKFLHEVE D  RAEE Y RAILASP DGELL+LYGKLVW+TQ
Sbjct: 181 EEMLKSNPSDPLILRNYGKFLHEVEKDTKRAEECYSRAILASPRDGELLALYGKLVWDTQ 240

Query: 241 RDEQRAKSYFDRAVYASPDDCSVLGSYAHFLWEVEADEEEEEEEEEEAAAAEKAEVPPAA 295
           RD++RA+ YFDRAV ASP+DC V+G YAHFLW VE DEEE         A   A  P  A
Sbjct: 241 RDKRRAQYYFDRAVCASPNDCLVIGYYAHFLWLVEDDEEE---------ATAVALAPAPA 270

[Close]

BLAST of MS017510 vs. TAIR 10
Match: AT4G17940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 203.8 bits (517), Expect = 2.0e-52
Identity = 128/290 (44.14%), Postives = 166/290 (57.24%), Query Frame = 0


Query: 1   MKSALARTGSVPVISPAGAPSPSFSNYRPFHK--------SY---VSSPKISLHFEINHR 60
           MKS L RTGS+PV+        S     P  +        SY    +  KIS+  + N  
Sbjct: 1   MKSLLMRTGSMPVLQNRLISGGSSRKMTPISRTNSVESLSSYGERFAGGKISIEVKAN-- 60

Query: 61  RGAKSSGIRRASSESDIARSLHQISNRYDQLGGVGSRSFPSGIPEDEFLNESRDAVAEEW 120
                 G+RR  SESD+ RS   +         VGS+  P+ IPED+   E     A+ W
Sbjct: 61  -----VGMRRVLSESDVIRSERMLKR-------VGSKPSPARIPEDDEAGEEEIRFADGW 120

Query: 121 IIQEDEDEFDISNYAGDFSGGAISMKNAGFFGSGIGSGGNI---VTDTFSGGSSDRSKIG 180
                          G    G + ++   F G G+G G        +   GG  D+SKIG
Sbjct: 121 ---------------GSMISGGLPVEEKCFTGGGVGGGSGYSGGYGNGGGGGYEDKSKIG 180

Query: 181 AYYEEMLKLNPSDSLLLRNYGKFLHEVENDAVRAEEFYGRAILASPGDGELLSLYGKLVW 240
            YY EML+ NP++SLLL NYGKFL+EVE DA  AEE+YGRAIL +PGDGE LS+YG+L+W
Sbjct: 181 DYYREMLRSNPNNSLLLMNYGKFLYEVEKDAEGAEEYYGRAILENPGDGEALSMYGRLIW 240

Query: 241 ETQRDEQRAKSYFDRAVYASPDDCSVLGSYAHFLWEVEADEEEEEEEEEE 277
           ET+RDE+RA+ YFD+AV ASP+DC VLGSYA F+WE E D++++EEEEEE
Sbjct: 241 ETKRDEKRAQGYFDQAVNASPNDCMVLGSYARFMWEAEDDDDDDEEEEEE 261

[Close]

BLAST of MS017510 vs. TAIR 10
Match: AT4G32340.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 125.9 bits (315), Expect = 5.2e-29
Identity = 73/159 (45.91%), Postives = 100/159 (62.89%), Query Frame = 0


Query: 136 NAGFFG-SGIGSGGNIVTDTFSGGSSDRSKIGAYYEEMLKLNPSDSLLLRNYGKFLHEVE 195
           N GF G  G G+GG        GG      +  YYEEM++  P D+LLL NY +FL EV+
Sbjct: 88  NGGFGGRGGDGAGG--------GGGGGGGSVDGYYEEMIQRYPGDTLLLSNYARFLKEVK 147

Query: 196 NDAVRAEEFYGRAILASPG-DGELLSLYGKLVWETQRDEQRAKSYFDRAVYASPDDCSVL 255
            D  +AEE+  RA+L+  G DGELLS+YG L+W+   D  RA+SY+D+AV +SPDDC+VL
Sbjct: 148 GDGRKAEEYCERAMLSESGRDGELLSMYGDLIWKNHGDGVRAQSYYDQAVQSSPDDCNVL 207

Query: 256 GSYAHFLWEVEADEEEEEEEEEEAAAAEKAEVPPAALVA 293
            SYA FLW+ E + EEEE +  E   ++    P  ++V+
Sbjct: 208 ASYARFLWDAEEEVEEEESKHHEDGFSDSTYNPSVSVVS 238

[Close]

BLAST of MS017510 vs. TAIR 10
Match: AT5G20190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 122.9 bits (307), Expect = 4.4e-28
Identity = 70/163 (42.94%), Postives = 95/163 (58.28%), Query Frame = 0


Query: 114 DEDEFDISNYAGDFSGGAISMKNAGFFGSGIGSGGNIVTDTFSGGSSDRSKIGAYYEEML 173
           DED    +  AG   GG        F G G G  G        GG         +Y +M+
Sbjct: 120 DED----TEVAGGGGGGM-------FHGGGKGRSGG----RSDGGDGGDDNTDVHYRKMI 179

Query: 174 KLNPSDSLLLRNYGKFLHEVENDAVRAEEFYGRAILASPGDGELLSLYGKLVWETQRDEQ 233
           + NP + + L NY KFL EV  D ++AEE+ GRAIL SP DG +L++Y +LVW+  +D  
Sbjct: 180 EANPGNGIFLSNYAKFLKEVRKDYLKAEEYCGRAILVSPNDGNVLAMYAELVWKIHKDSS 239

Query: 234 RAKSYFDRAVYASPDDCSVLGSYAHFLWEVEADEEEEEEEEEE 277
           RA++YF++AV A+P+DC V  SYA FLW+ E +EEEE+EE  E
Sbjct: 240 RAENYFNQAVAAAPEDCYVQASYARFLWDAEEEEEEEKEERHE 267

[Close]

BLAST of MS017510 vs. TAIR 10
Match: AT1G80130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 116.3 bits (290), Expect = 4.1e-26
Identity = 100/294 (34.01%), Postives = 135/294 (45.92%), Query Frame = 0


Query: 21  SPSFSNYRPFHKSYVSSPKISLHFEINHRRGAKSSGIRRASSESDIARSLHQI------- 80
           +P  +++ P H S  SSP+         RR    S     S +      LHQ        
Sbjct: 8   APILNSWLPQHCSRESSPEPESQL---WRRSTSLSLFSSKSIDGHTGEQLHQALSDNKEI 67

Query: 81  ------SNRYDQLGGVGSRSFPSGIPEDEF----LNESRDAVAEEWIIQEDEDEFDISNY 140
                 SN +       SR   S + E  +    L+ S   + E       + +   SN 
Sbjct: 68  IILKSKSNEHSYKTPTSSRQRRSSLDETRYTKKTLDRSSPFLVERLFSSSGQGDKASSND 127

Query: 141 AGD--FSGGAISMKNAGFFGSGIGSGGNIVTDTFSGGSSDRSKIGAYYEEMLKLNPSDSL 200
             +   SGG   M  +G  G+    GG +      GG S+      YY EM+  NP +SL
Sbjct: 128 RLETLVSGGGGGMGGSG--GNICNGGGGVGGSGVDGGRSE-DATDTYYREMIDSNPGNSL 187

Query: 201 LLRNYGKFLHEVENDAVRAEEFYGRAILASPGDGELLSLYGKLVWETQRDEQRAKSYFDR 260
           L  NY KFL EV+ D  +AEE+  RAIL +  DG +LSLY  L+    +D QRA SY+ +
Sbjct: 188 LTGNYAKFLKEVKGDMKKAEEYCERAILGNTNDGNVLSLYADLILHNHQDRQRAHSYYKQ 247

Query: 261 AVYASPDDCSVLGSYAHFLWEVEADEEEEE-EEEEEAAAAEKAEVPPAALVAAF 295
           AV  SP+DC V  SYA FLW+V+ DEE+E   EEEE  + E   VPP  +   F
Sbjct: 248 AVKMSPEDCYVQASYARFLWDVDEDEEDEALGEEEENLSDETGHVPPTTMFRDF 295

[Close]

BLAST of MS017510 vs. TAIR 10
Match: AT1G04530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 109.4 bits (272), Expect = 5.0e-24
Identity = 55/116 (47.41%), Postives = 78/116 (67.24%), Query Frame = 0


Query: 161 DRSKIGAYYEEMLKLNPSDSLLLRNYGKFLHEVENDAVRAEEFYGRAILASPGDGELLSL 220
           D    G YY+ ML+  P   LLL+NY KFL E + D   AEE+Y +  +  P DG  L+ 
Sbjct: 117 DDKNCGDYYKGMLEEYPLHPLLLKNYAKFL-EYKGDLSGAEEYYHKCTVVEPSDGVALAN 176

Query: 221 YGKLVWETQRDEQRAKSYFDRAVYASPDDCSVLGSYAHFLWEVEADEEEEEEEEEE 277
           YG+LV +  +DE +A SYF+RAV ASPDD  VL +YA FLWE+ AD+++E+++E++
Sbjct: 177 YGRLVMKLHQDEAKAMSYFERAVQASPDDSIVLAAYASFLWEINADDDDEDDDEDD 231

The following BLAST results are available for this feature:

BLAST of MS017510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156684.1	2.0e-155	99.66	uncharacterized protein LOC111023531 [Momordica charantia]	[more]
XP_022930988.1	2.5e-81	60.46	uncharacterized protein LOC111437316 [Cucurbita moschata] >KAG7036203.1 hypothet...	[more]
KAG6606262.1	9.4e-81	60.46	hypothetical protein SDJN03_03579, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023532088.1	6.1e-80	59.48	uncharacterized protein LOC111794359 [Cucurbita pepo subsp. pepo]	[more]
XP_022995940.1	6.1e-80	59.80	uncharacterized protein LOC111491305 [Cucurbita maxima]	[more]

BLAST of MS017510 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS017510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DU99	9.6e-156	99.66	uncharacterized protein LOC111023531 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1EX26	1.2e-81	60.46	uncharacterized protein LOC111437316 OS=Cucurbita moschata OX=3662 GN=LOC1114373...	[more]
A0A6J1K5B2	2.9e-80	59.80	uncharacterized protein LOC111491305 OS=Cucurbita maxima OX=3661 GN=LOC111491305...	[more]
A0A6J1HIV3	8.0e-78	59.87	uncharacterized protein LOC111463957 OS=Cucurbita moschata OX=3662 GN=LOC1114639...	[more]
A0A6J1HRN2	2.6e-76	59.67	uncharacterized protein LOC111466874 OS=Cucurbita maxima OX=3661 GN=LOC111466874...	[more]

BLAST of MS017510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17940.1	2.0e-52	44.14	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G32340.1	5.2e-29	45.91	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G20190.1	4.4e-28	42.94	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G80130.1	4.1e-26	34.01	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G04530.1	5.0e-24	47.41	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 263..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..286
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..279
None	No IPR available	PANTHER	PTHR26312:SF123	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN	coord: 1..274
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 1..274
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 158..283 e-value: 6.1E-11 score: 44.0
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 167..264

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS017510.1	MS017510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding