MS017496 (gene) Bitter gourd (TR) v1

Overview
NameMS017496
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMicrospore-specific promoter 2, putative
Locationscaffold373: 48804 .. 50666 (+)
RNA-Seq ExpressionMS017496
SyntenyMS017496
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGATGATGCAAAGTTGTCCCATCAGCCACAACATTCCTCCTCTTCCTCCATGACCCTTCTTTCTAGATTGGATCATTTGGATTTTGTTGTAAGCTTCTATCTGTTTTAGAGCAAAATTGGCTTCTCTTCTCTTTTTGTTAATTCTTTGATGTGGGGTTGTGGTTAAATTTCCATAGATGAAGTACTTGGAGAGAAAACAGAGCTTGGAAAGGAGATGCGTATCGTTGGATGTTGCACTAAAAGATACTTACTTTAAAGGTTCATTGTTGGATCGTGTGGCAGCTCTTGAGCATAGACTTTTTCAGGTTCAAATATTCCTCAAACCCCCCTTTTTCTTTTTCTTTTTTTATAAATTCCACTTCATTTTCCCCCATCCCCTCCATAACTTTGCATAAAGAAACAAGGTACAAGTTGATTTTCTCATCCTTTTTATGCTTTAAAAGTGCAATGAATCCCAATTCAAATCTGTCCATGTCAACCCACAAGTGAGGAGCAGCGTTCGAGAATAAAGTTAAAATTTTTTATCTACCAAAAAATCTTGAATTGAAAGTTTTTCAATATTATTTCTCCTTGTTTCATATTAGTAGTTGAGTATTGAGATTTGTGTCCTCAATACTCGAAGAGGAGTATATCGTTGAGCATATGTCGAAAAGATTGAATGTGGTTAAATATAAGTCGGAAAACTTTTGAGAGTCTAATAGGTCATAATCATCATCTAGCAGCTAATTTCCCCAAATTTTATAATTATTTGTTGTGTGTTATTGTTGAACCGCAGCTATGCTTAAAGATGGATTCAGGAAGCTCCACAAATCCTTCATCATTCACTTCAACACAAGCATCTGTGGAGATTAGTTCTTCTTCTTCTCCAAAACAGTTTTGCAGAGGGGAACCTTCTTCTTCATATCCCACATTCCACTACCCAAGCCATGGAGGAACCTCACAAATTTCCCAAGTCCAGGTAAAAAACACCCACGAGTATGAATAATTGCTACCACACAAAGATTTCCGAAGATAGTAACCAAGAATTTTAGAACTCTGCGTGATAACCATCTTATTTTTAGTTTTGTGTATCTAGGAATGAGGCTTATAAACAGATACGTTGCTTTGTTTTGTCATCTACTTTTTACTAACTACAAAAAAGTAGTTCTAAAGAAAGGGGGAATATTGTGAAAATGAAATCGTTGTCGTACCGAGCCTAAATGAACATGGTGTTTCACTGGTAATTATTCTTTTGCCTCAACTTGGGAGAGGATGATCAATTAAGCATTATGCCTTTGCCCTTTTTTTCTGTCTCTTGAAAAAATTTTCTGTCAAGTTTATGTCCTTTAAGCCATTGAATATTTTGCTGCTAGTGGAATATTGATACTTGACACTGATAGTGAGCTCTTTGCCTAGAATGCGGTTCATATACACATATAAGTTAAACTCTTAATTGGCATAGAAAAGCCTCATCCTTCCTAATTAATCAGATCCTGAATTCACGACGACGCCGAACATCAGTACGGTCCTCATGGTGTCGTCGTACCGGGGTGAGAAAAACCGAGGGTGTGGATTCAACATCTACAGTATACAACTGATGATTTGGCCTGTCTTTTCATACTCTTTAGAATCCAAGCTTTACCATAAATAGCATTTCAAATGATTCAATGTGTTACATTTGATTCCCCCTTTTTTACTCTCTTTTTATTGGATATAGGAGAAGCCTCAAAGACATCAACAGAAAAAGAAGCAACCCAGTCCTTCAAAAGGGCAACTTGGTAAGACAAGAAGTGGATCAAAGGATGAAGGAGGATCTTGCAAAAATGTGAAGAAAGGGATTCCTCCTCCCAAATGGCCACACTTGAGGATGTTTGGTTGC

mRNA sequence

ATGGAAGATGATGCAAAGTTGTCCCATCAGCCACAACATTCCTCCTCTTCCTCCATGACCCTTCTTTCTAGATTGGATCATTTGGATTTTGTTATGAAGTACTTGGAGAGAAAACAGAGCTTGGAAAGGAGATGCGTATCGTTGGATGTTGCACTAAAAGATACTTACTTTAAAGGTTCATTGTTGGATCGTGTGGCAGCTCTTGAGCATAGACTTTTTCAGCTATGCTTAAAGATGGATTCAGGAAGCTCCACAAATCCTTCATCATTCACTTCAACACAAGCATCTGTGGAGATTAGTTCTTCTTCTTCTCCAAAACAGTTTTGCAGAGGGGAACCTTCTTCTTCATATCCCACATTCCACTACCCAAGCCATGGAGGAACCTCACAAATTTCCCAAGTCCAGGAGAAGCCTCAAAGACATCAACAGAAAAAGAAGCAACCCAGTCCTTCAAAAGGGCAACTTGGTAAGACAAGAAGTGGATCAAAGGATGAAGGAGGATCTTGCAAAAATGTGAAGAAAGGGATTCCTCCTCCCAAATGGCCACACTTGAGGATGTTTGGTTGC

Coding sequence (CDS)

ATGGAAGATGATGCAAAGTTGTCCCATCAGCCACAACATTCCTCCTCTTCCTCCATGACCCTTCTTTCTAGATTGGATCATTTGGATTTTGTTATGAAGTACTTGGAGAGAAAACAGAGCTTGGAAAGGAGATGCGTATCGTTGGATGTTGCACTAAAAGATACTTACTTTAAAGGTTCATTGTTGGATCGTGTGGCAGCTCTTGAGCATAGACTTTTTCAGCTATGCTTAAAGATGGATTCAGGAAGCTCCACAAATCCTTCATCATTCACTTCAACACAAGCATCTGTGGAGATTAGTTCTTCTTCTTCTCCAAAACAGTTTTGCAGAGGGGAACCTTCTTCTTCATATCCCACATTCCACTACCCAAGCCATGGAGGAACCTCACAAATTTCCCAAGTCCAGGAGAAGCCTCAAAGACATCAACAGAAAAAGAAGCAACCCAGTCCTTCAAAAGGGCAACTTGGTAAGACAAGAAGTGGATCAAAGGATGAAGGAGGATCTTGCAAAAATGTGAAGAAAGGGATTCCTCCTCCCAAATGGCCACACTTGAGGATGTTTGGTTGC

Protein sequence

MEDDAKLSHQPQHSSSSSMTLLSRLDHLDFVMKYLERKQSLERRCVSLDVALKDTYFKGSLLDRVAALEHRLFQLCLKMDSGSSTNPSSFTSTQASVEISSSSSPKQFCRGEPSSSYPTFHYPSHGGTSQISQVQEKPQRHQQKKKQPSPSKGQLGKTRSGSKDEGGSCKNVKKGIPPPKWPHLRMFGC
Homology
BLAST of MS017496 vs. NCBI nr
Match: XP_022159710.1 (uncharacterized protein LOC111026052 [Momordica charantia])

HSP 1 Score: 369.8 bits (948), Expect = 1.4e-98
Identity = 188/189 (99.47%), Postives = 189/189 (100.00%), Query Frame = 0

Query: 1   MEDDAKLSHQPQHSSSSSMTLLSRLDHLDFVMKYLERKQSLERRCVSLDVALKDTYFKGS 60
           MEDDAKLSHQPQHSSSSSMTLLSRLDHLDFVMKYLERKQSLERRCVSLDVALKDTYFKGS
Sbjct: 1   MEDDAKLSHQPQHSSSSSMTLLSRLDHLDFVMKYLERKQSLERRCVSLDVALKDTYFKGS 60

Query: 61  LLDRVAALEHRLFQLCLKMDSGSSTNPSSFTSTQASVEISSSSSPKQFCRGEPSSSYPTF 120
           LLDRVAALEHRLFQLCLKMDSGSSTNPSSFTST+ASVEISSSSSPKQFCRGEPSSSYPTF
Sbjct: 61  LLDRVAALEHRLFQLCLKMDSGSSTNPSSFTSTEASVEISSSSSPKQFCRGEPSSSYPTF 120

Query: 121 HYPSHGGTSQISQVQEKPQRHQQKKKQPSPSKGQLGKTRSGSKDEGGSCKNVKKGIPPPK 180
           HYPSHGGTSQISQVQEKPQRHQQKKKQPSPSKGQLGKTRSGSKDEGGSCKNVKKGIPPPK
Sbjct: 121 HYPSHGGTSQISQVQEKPQRHQQKKKQPSPSKGQLGKTRSGSKDEGGSCKNVKKGIPPPK 180

Query: 181 WPHLRMFGC 190
           WPHLRMFGC
Sbjct: 181 WPHLRMFGC 189

BLAST of MS017496 vs. NCBI nr
Match: XP_022996286.1 (uncharacterized protein LOC111491560 [Cucurbita maxima])

HSP 1 Score: 281.6 bits (719), Expect = 5.1e-72
Identity = 159/200 (79.50%), Postives = 172/200 (86.00%), Query Frame = 0

Query: 1   MEDDAKLS-HQPQH-SSSSSMTLLSRLDHLDFVMKYLERKQSLER------RCVSLDVAL 60
           MED AKL  H PQH SSSSSMTL SRLD++D VMKYLE+KQ LER      +C+SLDVAL
Sbjct: 1   MEDYAKLQPHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERVGGVEKKCISLDVAL 60

Query: 61  KDTYFKGSLLDRVAALEHRLFQLCLKMDSGSSTNPSSFTSTQASVEISSSS-SPKQFCRG 120
           KDTYFKGSLLDRVA+LEHRLFQLCL+MDSGSS+NPSS  STQ S +ISSSS +PKQFCRG
Sbjct: 61  KDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGSTQTSADISSSSPTPKQFCRG 120

Query: 121 EPSSSYPTFHYPSHGGTSQISQVQEKP--QRHQQKKKQPSPSKGQLGKTRSGSKDEGGSC 180
           EPSSSYP FHYPSHGGTS+ISQ+QEKP  QRH+QKKKQ SP K QLGKTRSG KDEGGSC
Sbjct: 121 EPSSSYPIFHYPSHGGTSKISQIQEKPQTQRHEQKKKQQSPPKRQLGKTRSG-KDEGGSC 180

Query: 181 KNVKKGIPPPKWPHLRMFGC 190
           KNVKKGI PPKW HLRMFGC
Sbjct: 181 KNVKKGI-PPKWLHLRMFGC 198

BLAST of MS017496 vs. NCBI nr
Match: XP_023532991.1 (uncharacterized protein LOC111795001 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 281.2 bits (718), Expect = 6.7e-72
Identity = 159/200 (79.50%), Postives = 172/200 (86.00%), Query Frame = 0

Query: 1   MEDDAK-LSHQPQH-SSSSSMTLLSRLDHLDFVMKYLERKQSLER------RCVSLDVAL 60
           MED AK L H PQH SSSSSMTL SRLD++D VMKYLE+KQ LER      +C+SLDVAL
Sbjct: 1   MEDYAKLLPHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERVGGVEKKCISLDVAL 60

Query: 61  KDTYFKGSLLDRVAALEHRLFQLCLKMDSGSSTNPSSFTSTQASVEISSSS-SPKQFCRG 120
           KDTYFKGSLLDRVA+LEHRLFQLCL+MDSGSS+NPSS  STQ S +ISSSS +PKQFCRG
Sbjct: 61  KDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGSTQTSADISSSSPTPKQFCRG 120

Query: 121 EPSSSYPTFHYPSHGGTSQISQVQEKP--QRHQQKKKQPSPSKGQLGKTRSGSKDEGGSC 180
           EPSSSYP FHYPSHGGTS+ISQ+QEKP  QRH+QKKKQ SP K QLGKTRSG KDEGGSC
Sbjct: 121 EPSSSYPIFHYPSHGGTSKISQIQEKPQTQRHEQKKKQQSPPKRQLGKTRSG-KDEGGSC 180

Query: 181 KNVKKGIPPPKWPHLRMFGC 190
           KNVKKGI PPKW HLRMFGC
Sbjct: 181 KNVKKGI-PPKWLHLRMFGC 198

BLAST of MS017496 vs. NCBI nr
Match: XP_038888525.1 (uncharacterized protein LOC120078343 [Benincasa hispida])

HSP 1 Score: 280.4 bits (716), Expect = 1.1e-71
Identity = 158/206 (76.70%), Postives = 171/206 (83.01%), Query Frame = 0

Query: 1   MEDD--AKLSHQPQH--SSSSSMTLLSRLDHLDFVMKYLERKQSL------------ERR 60
           MEDD  AKLSH PQH  SSSSSMTL SRLDHLDFVMK LE+KQ L            E+R
Sbjct: 1   MEDDEEAKLSHHPQHYSSSSSSMTLFSRLDHLDFVMKDLEKKQRLGRFGGSNLEEGMEKR 60

Query: 61  CVSLDVALKDTYFKGSLLDRVAALEHRLFQLCLKMDSGSSTNPSSFTSTQASVEISSSSS 120
           C+SLDVALKDTYFKGSLLDRVA LE+RLFQLCL+MDSG+S+NPSS TS+Q SVEI SSSS
Sbjct: 61  CISLDVALKDTYFKGSLLDRVATLENRLFQLCLEMDSGNSSNPSSLTSSQTSVEICSSSS 120

Query: 121 PKQFCRGEPSSSYPTFHYPSHGGTSQISQVQEKPQRHQQKKKQPSPSKGQ-LGKTRSGSK 180
           PKQFCRG+PSSSYPTFHYP+HG TSQISQ+QEKPQR QQKK Q S SKGQ +GKTR+  K
Sbjct: 121 PKQFCRGQPSSSYPTFHYPNHGRTSQISQIQEKPQRQQQKKMQESLSKGQEVGKTRT-EK 180

Query: 181 DEGGSCKNVKKGIPPPKWPHLRMFGC 190
           DE GSCKNVKKGIP  KWPHLRMFGC
Sbjct: 181 DEVGSCKNVKKGIPSLKWPHLRMFGC 205

BLAST of MS017496 vs. NCBI nr
Match: XP_022930921.1 (uncharacterized protein LOC111437264 [Cucurbita moschata] >KAG7036191.1 hypothetical protein SDJN02_02992, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 278.1 bits (710), Expect = 5.6e-71
Identity = 158/200 (79.00%), Postives = 171/200 (85.50%), Query Frame = 0

Query: 1   MEDDAK-LSHQPQH-SSSSSMTLLSRLDHLDFVMKYLERKQSLER------RCVSLDVAL 60
           MED AK L H PQH SSSSSMTL SRLD++D VMKYLE+KQ LER      +C+SLDVAL
Sbjct: 1   MEDYAKLLPHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERVGGVEKKCISLDVAL 60

Query: 61  KDTYFKGSLLDRVAALEHRLFQLCLKMDSGSSTNPSSFTSTQASVEISSSS-SPKQFCRG 120
           KDTYFKGSLLDRVA+LEHRLFQLCL+MDSGSS+NPSS  STQ S +ISSSS +PKQFCRG
Sbjct: 61  KDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGSTQTSADISSSSPTPKQFCRG 120

Query: 121 EPSSSYPTFHYPSHGGTSQISQVQEK--PQRHQQKKKQPSPSKGQLGKTRSGSKDEGGSC 180
           EPSSSYP FHYPSHGGTS+ISQ+QEK   QRH+QKKKQ SP K QLGKTRSG KDEGGSC
Sbjct: 121 EPSSSYPIFHYPSHGGTSKISQIQEKAQTQRHEQKKKQQSPPKRQLGKTRSG-KDEGGSC 180

Query: 181 KNVKKGIPPPKWPHLRMFGC 190
           KNVKKGI PPKW HLRMFGC
Sbjct: 181 KNVKKGI-PPKWLHLRMFGC 198

BLAST of MS017496 vs. ExPASy TrEMBL
Match: A0A6J1DZI5 (uncharacterized protein LOC111026052 OS=Momordica charantia OX=3673 GN=LOC111026052 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 6.9e-99
Identity = 188/189 (99.47%), Postives = 189/189 (100.00%), Query Frame = 0

Query: 1   MEDDAKLSHQPQHSSSSSMTLLSRLDHLDFVMKYLERKQSLERRCVSLDVALKDTYFKGS 60
           MEDDAKLSHQPQHSSSSSMTLLSRLDHLDFVMKYLERKQSLERRCVSLDVALKDTYFKGS
Sbjct: 1   MEDDAKLSHQPQHSSSSSMTLLSRLDHLDFVMKYLERKQSLERRCVSLDVALKDTYFKGS 60

Query: 61  LLDRVAALEHRLFQLCLKMDSGSSTNPSSFTSTQASVEISSSSSPKQFCRGEPSSSYPTF 120
           LLDRVAALEHRLFQLCLKMDSGSSTNPSSFTST+ASVEISSSSSPKQFCRGEPSSSYPTF
Sbjct: 61  LLDRVAALEHRLFQLCLKMDSGSSTNPSSFTSTEASVEISSSSSPKQFCRGEPSSSYPTF 120

Query: 121 HYPSHGGTSQISQVQEKPQRHQQKKKQPSPSKGQLGKTRSGSKDEGGSCKNVKKGIPPPK 180
           HYPSHGGTSQISQVQEKPQRHQQKKKQPSPSKGQLGKTRSGSKDEGGSCKNVKKGIPPPK
Sbjct: 121 HYPSHGGTSQISQVQEKPQRHQQKKKQPSPSKGQLGKTRSGSKDEGGSCKNVKKGIPPPK 180

Query: 181 WPHLRMFGC 190
           WPHLRMFGC
Sbjct: 181 WPHLRMFGC 189

BLAST of MS017496 vs. ExPASy TrEMBL
Match: A0A6J1K4A8 (uncharacterized protein LOC111491560 OS=Cucurbita maxima OX=3661 GN=LOC111491560 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 2.5e-72
Identity = 159/200 (79.50%), Postives = 172/200 (86.00%), Query Frame = 0

Query: 1   MEDDAKLS-HQPQH-SSSSSMTLLSRLDHLDFVMKYLERKQSLER------RCVSLDVAL 60
           MED AKL  H PQH SSSSSMTL SRLD++D VMKYLE+KQ LER      +C+SLDVAL
Sbjct: 1   MEDYAKLQPHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERVGGVEKKCISLDVAL 60

Query: 61  KDTYFKGSLLDRVAALEHRLFQLCLKMDSGSSTNPSSFTSTQASVEISSSS-SPKQFCRG 120
           KDTYFKGSLLDRVA+LEHRLFQLCL+MDSGSS+NPSS  STQ S +ISSSS +PKQFCRG
Sbjct: 61  KDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGSTQTSADISSSSPTPKQFCRG 120

Query: 121 EPSSSYPTFHYPSHGGTSQISQVQEKP--QRHQQKKKQPSPSKGQLGKTRSGSKDEGGSC 180
           EPSSSYP FHYPSHGGTS+ISQ+QEKP  QRH+QKKKQ SP K QLGKTRSG KDEGGSC
Sbjct: 121 EPSSSYPIFHYPSHGGTSKISQIQEKPQTQRHEQKKKQQSPPKRQLGKTRSG-KDEGGSC 180

Query: 181 KNVKKGIPPPKWPHLRMFGC 190
           KNVKKGI PPKW HLRMFGC
Sbjct: 181 KNVKKGI-PPKWLHLRMFGC 198

BLAST of MS017496 vs. ExPASy TrEMBL
Match: A0A6J1ES90 (uncharacterized protein LOC111437264 OS=Cucurbita moschata OX=3662 GN=LOC111437264 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.7e-71
Identity = 158/200 (79.00%), Postives = 171/200 (85.50%), Query Frame = 0

Query: 1   MEDDAK-LSHQPQH-SSSSSMTLLSRLDHLDFVMKYLERKQSLER------RCVSLDVAL 60
           MED AK L H PQH SSSSSMTL SRLD++D VMKYLE+KQ LER      +C+SLDVAL
Sbjct: 1   MEDYAKLLPHHPQHSSSSSSMTLFSRLDYMDLVMKYLEKKQRLERVGGVEKKCISLDVAL 60

Query: 61  KDTYFKGSLLDRVAALEHRLFQLCLKMDSGSSTNPSSFTSTQASVEISSSS-SPKQFCRG 120
           KDTYFKGSLLDRVA+LEHRLFQLCL+MDSGSS+NPSS  STQ S +ISSSS +PKQFCRG
Sbjct: 61  KDTYFKGSLLDRVASLEHRLFQLCLEMDSGSSSNPSSLGSTQTSADISSSSPTPKQFCRG 120

Query: 121 EPSSSYPTFHYPSHGGTSQISQVQEK--PQRHQQKKKQPSPSKGQLGKTRSGSKDEGGSC 180
           EPSSSYP FHYPSHGGTS+ISQ+QEK   QRH+QKKKQ SP K QLGKTRSG KDEGGSC
Sbjct: 121 EPSSSYPIFHYPSHGGTSKISQIQEKAQTQRHEQKKKQQSPPKRQLGKTRSG-KDEGGSC 180

Query: 181 KNVKKGIPPPKWPHLRMFGC 190
           KNVKKGI PPKW HLRMFGC
Sbjct: 181 KNVKKGI-PPKWLHLRMFGC 198

BLAST of MS017496 vs. ExPASy TrEMBL
Match: A0A0A0LEC6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902320 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 1.3e-57
Identity = 141/211 (66.82%), Postives = 160/211 (75.83%), Query Frame = 0

Query: 2   EDDAKLSHQPQH--SSSSSMTLLSRLDHLDFVMKYLERKQSLER-------------RCV 61
           +D+ KL   PQ   SSSSSMTL SRLDHLDFVMK LE+KQ LER             R +
Sbjct: 4   DDNPKLFPHPQRHSSSSSSMTLFSRLDHLDFVMKELEKKQRLERLFGESNLEEGMGGRSI 63

Query: 62  SLDVALKDTYFKGSLLDRVAALEHRLFQLCLKMDSGSSTNPSSFTS---TQASVEISSSS 121
           S+DVALKDTY KGSLLDRVAALEHRL QLCL+M+SGSS+NPSS T+   T +S+EI+SSS
Sbjct: 64  SMDVALKDTYSKGSLLDRVAALEHRLLQLCLEMESGSSSNPSSLTTSSQTSSSLEITSSS 123

Query: 122 SPKQFCRGE-PSSSYPTFHYPSHGGTSQISQVQEKPQRHQQKKKQPSPSKGQ--LGKTRS 181
           SPK+FC G+  SSSYPTFHYP++G TSQ+SQ QEKPQR QQKKKQ S  KGQ  +GKT +
Sbjct: 124 SPKKFCNGQTSSSSYPTFHYPNNGTTSQVSQFQEKPQRQQQKKKQQSTPKGQVVVGKTMT 183

Query: 182 GSKDEGGSCKNVKKGIPPP--KWPHLRMFGC 190
             KDE GSCKNVKKG  P   KWPHLRMFGC
Sbjct: 184 -EKDEVGSCKNVKKGNNPSAFKWPHLRMFGC 213

BLAST of MS017496 vs. ExPASy TrEMBL
Match: A0A5D3E4W5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004430 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 7.0e-43
Identity = 108/152 (71.05%), Postives = 123/152 (80.92%), Query Frame = 0

Query: 44  RCVSLDVALKDTYFKGSLLDRVAALEHRLFQLCLKMDS-GSSTNPSSFT-STQASVE-IS 103
           R +S+DVALKDTYFKGSLLDRVAALEHRL QLCL+M+S GSS+NPSS T S+Q S+E I+
Sbjct: 4   RSISMDVALKDTYFKGSLLDRVAALEHRLLQLCLEMESAGSSSNPSSLTNSSQTSLEIIT 63

Query: 104 SSSSPKQFCRGEPS--SSYPTFHYPSHGGTSQISQVQEKPQRHQQKKKQPSPSKGQ--LG 163
           SSSSPK FC G+ S  SSYPTFHYP++G TSQISQ QEKPQR QQKKKQ S  KGQ  + 
Sbjct: 64  SSSSPKIFCNGQSSSASSYPTFHYPNNGTTSQISQFQEKPQRQQQKKKQQSTPKGQVVVS 123

Query: 164 KTRSGSKDEGGSCKNVKKGIPPPKWPHLRMFG 189
           KT +   +E GSCKNVKKG P  KWPHLR+FG
Sbjct: 124 KTMTEKDEEVGSCKNVKKGNPSFKWPHLRLFG 155

BLAST of MS017496 vs. TAIR 10
Match: AT5G46795.1 (microspore-specific promoter 2 )

HSP 1 Score: 89.0 bits (219), Expect = 4.5e-18
Identity = 73/195 (37.44%), Postives = 106/195 (54.36%), Query Frame = 0

Query: 10  QPQHSSSSSMTLLSRLDHLDFVMKYLERKQSL----------ERRCVSLDVALKDTYFKG 69
           + Q  S SS+ +LSRL+HLDFV+K LER+Q+L           R  +    A+++ YFKG
Sbjct: 5   EQQKHSLSSLPMLSRLEHLDFVIKNLERQQNLPKWKDESAPTTRGLIDRGTAIREAYFKG 64

Query: 70  SLLDRVAALEHRLFQLCLKMDSGSSTNPSSFTSTQASVEISSSSSPKQFCRGEP--SSSY 129
           SLLDR+AALE RLFQ+CL+++S S     S TST  S E SS    +   +  P  SS+ 
Sbjct: 65  SLLDRIAALETRLFQICLELESSS----GSSTSTGGSGETSSQRIKRDLTKTLPIFSSNI 124

Query: 130 PTFHYPSHGGTSQISQVQEKPQRHQQKKKQPSPSKGQLGKTRSGSK--DEGGSCK-NVKK 189
             FH P       + +++EK +  ++K+++ +  K  L K    +K  D   +CK   KK
Sbjct: 125 NPFHVPLQ-HPQDLREMEEKIE--EEKEEEINVEKPLLEKKNKKTKKNDANETCKPKKKK 184

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022159710.11.4e-9899.47uncharacterized protein LOC111026052 [Momordica charantia][more]
XP_022996286.15.1e-7279.50uncharacterized protein LOC111491560 [Cucurbita maxima][more]
XP_023532991.16.7e-7279.50uncharacterized protein LOC111795001 [Cucurbita pepo subsp. pepo][more]
XP_038888525.11.1e-7176.70uncharacterized protein LOC120078343 [Benincasa hispida][more]
XP_022930921.15.6e-7179.00uncharacterized protein LOC111437264 [Cucurbita moschata] >KAG7036191.1 hypothet... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DZI56.9e-9999.47uncharacterized protein LOC111026052 OS=Momordica charantia OX=3673 GN=LOC111026... [more]
A0A6J1K4A82.5e-7279.50uncharacterized protein LOC111491560 OS=Cucurbita maxima OX=3661 GN=LOC111491560... [more]
A0A6J1ES902.7e-7179.00uncharacterized protein LOC111437264 OS=Cucurbita moschata OX=3662 GN=LOC1114372... [more]
A0A0A0LEC61.3e-5766.82Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902320 PE=4 SV=1[more]
A0A5D3E4W57.0e-4371.05Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
AT5G46795.14.5e-1837.44microspore-specific promoter 2 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..189
NoneNo IPR availablePANTHERPTHR34190EXPRESSED PROTEINcoord: 12..189
NoneNo IPR availablePANTHERPTHR34190:SF3MICROSPORE-SPECIFIC PROMOTER 2coord: 12..189

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS017496.1MS017496.1mRNA