MS017418 (gene) Bitter gourd (TR) v1

Overview
NameMS017418
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionL-galactono-1,4-lactone dehydrogenase
Locationscaffold1474: 313999 .. 314127 (+)
RNA-Seq ExpressionMS017418
SyntenyMS017418
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACTTGCCTTCACCACAGAGAAATGAAATAACAGAGGAGTTGTTTCATCACAGGCATCTCTGCCAAACACTGCCCTGGGATCATCAATATGCTGCCTTTGAACATTGGGCTAAGAATGAAGTACCC

mRNA sequence

ATGTACTTGCCTTCACCACAGAGAAATGAAATAACAGAGGAGTTGTTTCATCACAGGCATCTCTGCCAAACACTGCCCTGGGATCATCAATATGCTGCCTTTGAACATTGGGCTAAGAATGAAGTACCC

Coding sequence (CDS)

ATGTACTTGCCTTCACCACAGAGAAATGAAATAACAGAGGAGTTGTTTCATCACAGGCATCTCTGCCAAACACTGCCCTGGGATCATCAATATGCTGCCTTTGAACATTGGGCTAAGAATGAAGTACCC

Protein sequence

MYLPSPQRNEITEELFHHRHLCQTLPWDHQYAAFEHWAKNEVP
Homology
[Close]
BLAST of MS017418 vs. NCBI nr
Match: XP_038882838.1 (L-galactono-1,4-lactone dehydrogenase, mitochondrial isoform X1 [Benincasa hispida])

HSP 1 Score: 66.6 bits (161), Expect = 5.9e-08
Identity = 33/46 (71.74%), Postives = 36/46 (78.26%), Query Frame = 0 

Query: 1   MYLPSP---QRNEITEELFHHRHLCQTLPWDHQYAAFEHWAKNEVP 44
           MYLP+    QR EITEE FH+RHL QTL WD QY+AFEHWAK EVP
Sbjct: 495 MYLPTSDARQRKEITEEFFHYRHLAQTLLWD-QYSAFEHWAKIEVP 539

[Close]
BLAST of MS017418 vs. NCBI nr
Match: KAG6595695.1 (L-galactono-1,4-lactone dehydrogenase, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 66.2 bits (160), Expect = 7.7e-08
Identity = 33/46 (71.74%), Postives = 36/46 (78.26%), Query Frame = 0 

Query: 1   MYLPSP---QRNEITEELFHHRHLCQTLPWDHQYAAFEHWAKNEVP 44
           MYLP+    QR EITEE FH+RHL QTL WD QY+AFEHWAK EVP
Sbjct: 495 MYLPTSDARQRKEITEEFFHYRHLTQTLLWD-QYSAFEHWAKIEVP 539

[Close]
BLAST of MS017418 vs. NCBI nr
Match: XP_023517263.1 (L-galactono-1,4-lactone dehydrogenase, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 66.2 bits (160), Expect = 7.7e-08
Identity = 33/46 (71.74%), Postives = 36/46 (78.26%), Query Frame = 0 

Query: 1   MYLPSP---QRNEITEELFHHRHLCQTLPWDHQYAAFEHWAKNEVP 44
           MYLP+    QR EITEE FH+RHL QTL WD QY+AFEHWAK EVP
Sbjct: 495 MYLPTSDARQRKEITEEFFHYRHLTQTLLWD-QYSAFEHWAKIEVP 539

[Close]
BLAST of MS017418 vs. NCBI nr
Match: NP_001292704.1 (L-galactono-1,4-lactone dehydrogenase, mitochondrial [Cucumis sativus] >ADT80722.1 L-galactono-1,4-lactone dehydrogenase [Cucumis sativus])

HSP 1 Score: 66.2 bits (160), Expect = 7.7e-08
Identity = 33/46 (71.74%), Postives = 36/46 (78.26%), Query Frame = 0 

Query: 1   MYLPSP---QRNEITEELFHHRHLCQTLPWDHQYAAFEHWAKNEVP 44
           MYLP+    QR EITEE FH+RHL QTL WD QY+AFEHWAK EVP
Sbjct: 496 MYLPTSDARQRKEITEEFFHYRHLTQTLLWD-QYSAFEHWAKIEVP 540

[Close]
BLAST of MS017418 vs. NCBI nr
Match: XP_022925153.1 (L-galactono-1,4-lactone dehydrogenase, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 66.2 bits (160), Expect = 7.7e-08
Identity = 33/46 (71.74%), Postives = 36/46 (78.26%), Query Frame = 0 

Query: 1   MYLPSP---QRNEITEELFHHRHLCQTLPWDHQYAAFEHWAKNEVP 44
           MYLP+    QR EITEE FH+RHL QTL WD QY+AFEHWAK EVP
Sbjct: 495 MYLPTSDARQRKEITEEFFHYRHLTQTLLWD-QYSAFEHWAKIEVP 539

[Close]
BLAST of MS017418 vs. ExPASy Swiss-Prot
Match: O47881 (L-galactono-1,4-lactone dehydrogenase, mitochondrial OS=Brassica oleracea OX=3712 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.7e-08
Identity = 27/46 (58.70%), Postives = 34/46 (73.91%), Query Frame = 0 

Query: 1   MYLPSP---QRNEITEELFHHRHLCQTLPWDHQYAAFEHWAKNEVP 44
           MYLP+    QR +IT+E FH+RHL Q   WD QY+A+EHWAK E+P
Sbjct: 506 MYLPTADPRQRKDITDEFFHYRHLTQAKLWD-QYSAYEHWAKIEIP 550

[Close]
BLAST of MS017418 vs. ExPASy Swiss-Prot
Match: Q9SU56 (L-galactono-1,4-lactone dehydrogenase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GLDH PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.0e-07
Identity = 26/46 (56.52%), Postives = 34/46 (73.91%), Query Frame = 0 

Query: 1   MYLPSP---QRNEITEELFHHRHLCQTLPWDHQYAAFEHWAKNEVP 44
           MYLP+    QR +IT+E FH+RHL Q   WD Q++A+EHWAK E+P
Sbjct: 516 MYLPTADPRQRKDITDEFFHYRHLTQKQLWD-QFSAYEHWAKIEIP 560

[Close]
BLAST of MS017418 vs. ExPASy Swiss-Prot
Match: Q2RAP0 (L-galactono-1,4-lactone dehydrogenase 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=GLDH1 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 3.3e-06
Identity = 27/46 (58.70%), Postives = 32/46 (69.57%), Query Frame = 0 

Query: 1   MYLPSP---QRNEITEELFHHRHLCQTLPWDHQYAAFEHWAKNEVP 44
           MYLP+    QR EITEE F++R   QT  WD  Y+A+EHWAK EVP
Sbjct: 486 MYLPTSDARQRKEITEEFFNYRSKTQTNLWD-GYSAYEHWAKIEVP 530

[Close]
BLAST of MS017418 vs. ExPASy Swiss-Prot
Match: Q2QXY1 (L-galactono-1,4-lactone dehydrogenase 2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=GLDH2 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 3.3e-06
Identity = 27/46 (58.70%), Postives = 32/46 (69.57%), Query Frame = 0 

Query: 1   MYLPSP---QRNEITEELFHHRHLCQTLPWDHQYAAFEHWAKNEVP 44
           MYLP+    QR EITEE F++R   QT  WD  Y+A+EHWAK EVP
Sbjct: 486 MYLPTSDARQRKEITEEFFNYRSKTQTNLWD-GYSAYEHWAKIEVP 530

[Close]
BLAST of MS017418 vs. ExPASy TrEMBL
Match: A0A6J1HRG8 (L-galactono-1,4-lactone dehydrogenase, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111465966 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.7e-08
Identity = 33/46 (71.74%), Postives = 36/46 (78.26%), Query Frame = 0 

Query: 1   MYLPSP---QRNEITEELFHHRHLCQTLPWDHQYAAFEHWAKNEVP 44
           MYLP+    QR EITEE FH+RHL QTL WD QY+AFEHWAK EVP
Sbjct: 495 MYLPTSDARQRKEITEEFFHYRHLTQTLLWD-QYSAFEHWAKIEVP 539

[Close]
BLAST of MS017418 vs. ExPASy TrEMBL
Match: A0A0A0KYT8 (ALO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G236360 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.7e-08
Identity = 33/46 (71.74%), Postives = 36/46 (78.26%), Query Frame = 0 

Query: 1   MYLPSP---QRNEITEELFHHRHLCQTLPWDHQYAAFEHWAKNEVP 44
           MYLP+    QR EITEE FH+RHL QTL WD QY+AFEHWAK EVP
Sbjct: 263 MYLPTSDARQRKEITEEFFHYRHLTQTLLWD-QYSAFEHWAKIEVP 307

[Close]
BLAST of MS017418 vs. ExPASy TrEMBL
Match: E7E016 (L-galactono-1,4-lactone dehydrogenase OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.7e-08
Identity = 33/46 (71.74%), Postives = 36/46 (78.26%), Query Frame = 0 

Query: 1   MYLPSP---QRNEITEELFHHRHLCQTLPWDHQYAAFEHWAKNEVP 44
           MYLP+    QR EITEE FH+RHL QTL WD QY+AFEHWAK EVP
Sbjct: 496 MYLPTSDARQRKEITEEFFHYRHLTQTLLWD-QYSAFEHWAKIEVP 540

[Close]
BLAST of MS017418 vs. ExPASy TrEMBL
Match: A0A6J1EAT5 (L-galactono-1,4-lactone dehydrogenase 1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111432372 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.7e-08
Identity = 33/46 (71.74%), Postives = 36/46 (78.26%), Query Frame = 0 

Query: 1   MYLPSP---QRNEITEELFHHRHLCQTLPWDHQYAAFEHWAKNEVP 44
           MYLP+    QR EITEE FH+RHL QTL WD QY+AFEHWAK EVP
Sbjct: 142 MYLPTSDARQRKEITEEFFHYRHLTQTLLWD-QYSAFEHWAKIEVP 186

[Close]
BLAST of MS017418 vs. ExPASy TrEMBL
Match: A0A6J1EEF4 (L-galactono-1,4-lactone dehydrogenase, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111432481 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.7e-08
Identity = 33/46 (71.74%), Postives = 36/46 (78.26%), Query Frame = 0 

Query: 1   MYLPSP---QRNEITEELFHHRHLCQTLPWDHQYAAFEHWAKNEVP 44
           MYLP+    QR EITEE FH+RHL QTL WD QY+AFEHWAK EVP
Sbjct: 495 MYLPTSDARQRKEITEEFFHYRHLTQTLLWD-QYSAFEHWAKIEVP 539

[Close]
BLAST of MS017418 vs. TAIR 10
Match: AT3G47930.1 (L-galactono-1,4-lactone dehydrogenase )

HSP 1 Score: 56.2 bits (134), Expect = 7.4e-09
Identity = 26/46 (56.52%), Postives = 34/46 (73.91%), Query Frame = 0 

Query: 1   MYLPSP---QRNEITEELFHHRHLCQTLPWDHQYAAFEHWAKNEVP 44
           MYLP+    QR +IT+E FH+RHL Q   WD Q++A+EHWAK E+P
Sbjct: 516 MYLPTADPRQRKDITDEFFHYRHLTQKQLWD-QFSAYEHWAKIEIP 560

The following BLAST results are available for this feature:
BLAST of MS017418 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038882838.15.9e-0871.74L-galactono-1,4-lactone dehydrogenase, mitochondrial isoform X1 [Benincasa hispi... [more]
KAG6595695.17.7e-0871.74L-galactono-1,4-lactone dehydrogenase, mitochondrial, partial [Cucurbita argyros... [more]
XP_023517263.17.7e-0871.74L-galactono-1,4-lactone dehydrogenase, mitochondrial [Cucurbita pepo subsp. pepo... [more]
NP_001292704.17.7e-0871.74L-galactono-1,4-lactone dehydrogenase, mitochondrial [Cucumis sativus] >ADT80722... [more]
XP_022925153.17.7e-0871.74L-galactono-1,4-lactone dehydrogenase, mitochondrial-like [Cucurbita moschata][more]
BLAST of MS017418 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O478812.7e-0858.70L-galactono-1,4-lactone dehydrogenase, mitochondrial OS=Brassica oleracea OX=371... [more]
Q9SU561.0e-0756.52L-galactono-1,4-lactone dehydrogenase, mitochondrial OS=Arabidopsis thaliana OX=... [more]
Q2RAP03.3e-0658.70L-galactono-1,4-lactone dehydrogenase 1, mitochondrial OS=Oryza sativa subsp. ja... [more]
Q2QXY13.3e-0658.70L-galactono-1,4-lactone dehydrogenase 2, mitochondrial OS=Oryza sativa subsp. ja... [more]
BLAST of MS017418 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HRG83.7e-0871.74L-galactono-1,4-lactone dehydrogenase, mitochondrial OS=Cucurbita maxima OX=3661... [more]
A0A0A0KYT83.7e-0871.74ALO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G236360 PE=4 SV... [more]
E7E0163.7e-0871.74L-galactono-1,4-lactone dehydrogenase OS=Cucumis sativus OX=3659 PE=2 SV=1[more]
A0A6J1EAT53.7e-0871.74L-galactono-1,4-lactone dehydrogenase 1, mitochondrial-like OS=Cucurbita moschat... [more]
A0A6J1EEF43.7e-0871.74L-galactono-1,4-lactone dehydrogenase, mitochondrial-like OS=Cucurbita moschata ... [more]
BLAST of MS017418 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G47930.17.4e-0956.52L-galactono-1,4-lactone dehydrogenase [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS017418.1MS017418.1mRNA