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MS017326 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GCAGCGAGAATTAAGGTTCACGAGCTTAGACAGAAGTCGAAGGCAGATCTTTTGGGCCAGCTTAAGGACCTTAAGGCGGAGCTTGCTCTTCTACGTGTTGCTAAGGTCACCGGTGGTGCTCCCAACAAGCTCTCCAAAATGTGCGATATTCAATCTTTCTCTTGATTTTTGTGTTTTGTATATATTGATTGTTTCCTTCATCGTGTTTGGGGTTTTTTTTTGTGATGTTTTTTTCTTGGCGTTTGTTTGGGTGTTCTTGACTGCAGTAAGGTGGTGAGGTTGTCAATCGCTCAGGTGTTGACAGTGATTTCTCAGAAACAGAAGGCCGCGCTTAGGGAAGCTTACAAGAAGAAGAAGCTTTTGCCTCTTGATTTGCGCCCCAAGAAGACCAGGGCCATTCGTAGAAGACTCACCAAGCACCAAGTAAGCGCTTTCTTCCTTTGAAGTATTTTCGTATCTCTGTGCTTAAATTTCTGCTAAATATTTGGTTCCTCGTCGAATGAATGGTGCAGTATGCTGTATAAGTTTGAATTTGATTTCTTAGATTAATGGTCGAGGATTATGTTGTGTAGTGTGATTTTATTTTGAACGTTGTTTTTCCAATGGAGCTTCGTGTTTGGTATGGTATGTGAAAATTGATTTACCACCTTGGCCATTATTAAGTTTACGCTGCGCTTCTTACTCTGTGTTTGACATCGCTTTTAATTGCTTATTGGTTTTGCTAGTGTTTGGTTTAAATTTTAAATAGTGCTTATTAATCAATTAAAATTAAAAGCATTTTAAAATCTTCTTGATACTTTGCCGTACTAGTTACAGGAATTTTAAAAAAAAGTAAATATACTTCTAGATGAAACATTGAATTAGTTTATCAAACAACTTTTTTAGAATGGATTCTGAATTCACCCTTAGTCTAGCAATTTTAAAAAGAGTTTGTTTCTCAGAGATATTGAACACAATGGTGCCGGAAGGATCCTTTATTAACCCGAATAATGCTCAAGTATTCAGAGCCTGTAACTATTTTCAATGTCTTCGTTTTTATTATTGAGACAACCCTCAGTTTTATGCTTTATGTAGAATGCTGAATGTATACAATTTAGAGGTTCTTTATCGCTCAACTTTTTGGGTATTGAACATTTGATGTTTAGAATACAAATTTTCTTGTCTTCTATGTCATGTTAAAGCTATTGCTATCCAGCCTTAAAATAATGAGTACAGTAAAGTGTTGACTGTCTTTCTTCATCTTTCTAATTCCATGTTATTTTATTGTGTTTTACAGGCATCTCTAAAGACCGAGCGACAGAAGAAGAAAGAGATGTACTACCCATTGAGGAAGTATGCCATTAAGGTG GCAGCGAGAATTAAGGTTCACGAGCTTAGACAGAAGTCGAAGGCAGATCTTTTGGGCCAGCTTAAGGACCTTAAGGCGGAGCTTGCTCTTCTACGTGTTGCTAAGGTCACCGGTGGTGCTCCCAACAAGCTCTCCAAAATTAAGGTGGTGAGGTTGTCAATCGCTCAGGTGTTGACAGTGATTTCTCAGAAACAGAAGGCCGCGCTTAGGGAAGCTTACAAGAAGAAGAAGCTTTTGCCTCTTGATTTGCGCCCCAAGAAGACCAGGGCCATTCGTAGAAGACTCACCAAGCACCAAGCATCTCTAAAGACCGAGCGACAGAAGAAGAAAGAGATGTACTACCCATTGAGGAAGTATGCCATTAAGGTG GCAGCGAGAATTAAGGTTCACGAGCTTAGACAGAAGTCGAAGGCAGATCTTTTGGGCCAGCTTAAGGACCTTAAGGCGGAGCTTGCTCTTCTACGTGTTGCTAAGGTCACCGGTGGTGCTCCCAACAAGCTCTCCAAAATTAAGGTGGTGAGGTTGTCAATCGCTCAGGTGTTGACAGTGATTTCTCAGAAACAGAAGGCCGCGCTTAGGGAAGCTTACAAGAAGAAGAAGCTTTTGCCTCTTGATTTGCGCCCCAAGAAGACCAGGGCCATTCGTAGAAGACTCACCAAGCACCAAGCATCTCTAAAGACCGAGCGACAGAAGAAGAAAGAGATGTACTACCCATTGAGGAAGTATGCCATTAAGGTG AARIKVHELRQKSKADLLGQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAIKV Homology
BLAST of MS017326 vs. NCBI nr
Match: XP_022139337.1 (60S ribosomal protein L35-2 [Momordica charantia]) HSP 1 Score: 216.9 bits (551), Expect = 1.0e-52 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of MS017326 vs. NCBI nr
Match: XP_004150961.1 (60S ribosomal protein L35 [Cucumis sativus] >KGN50505.1 hypothetical protein Csa_000675 [Cucumis sativus]) HSP 1 Score: 213.0 bits (541), Expect = 1.5e-51 Identity = 120/122 (98.36%), Postives = 120/122 (98.36%), Query Frame = 0
BLAST of MS017326 vs. NCBI nr
Match: XP_022134532.1 (60S ribosomal protein L35 [Momordica charantia]) HSP 1 Score: 212.2 bits (539), Expect = 2.5e-51 Identity = 120/122 (98.36%), Postives = 121/122 (99.18%), Query Frame = 0
BLAST of MS017326 vs. NCBI nr
Match: XP_022939961.1 (60S ribosomal protein L35 [Cucurbita moschata] >XP_022957446.1 60S ribosomal protein L35 [Cucurbita moschata] >XP_022991739.1 60S ribosomal protein L35 [Cucurbita maxima] >XP_022993735.1 60S ribosomal protein L35 [Cucurbita maxima] >XP_023523288.1 60S ribosomal protein L35 [Cucurbita pepo subsp. pepo] >KAG6578726.1 60S ribosomal protein L35, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016256.1 60S ribosomal protein L35 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 211.5 bits (537), Expect = 4.2e-51 Identity = 119/122 (97.54%), Postives = 121/122 (99.18%), Query Frame = 0
BLAST of MS017326 vs. NCBI nr
Match: KAG7031634.1 (60S ribosomal protein L35, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 211.5 bits (537), Expect = 4.2e-51 Identity = 119/122 (97.54%), Postives = 121/122 (99.18%), Query Frame = 0
BLAST of MS017326 vs. ExPASy Swiss-Prot
Match: O80626 (60S ribosomal protein L35-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35B PE=2 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 5.7e-51 Identity = 112/122 (91.80%), Postives = 118/122 (96.72%), Query Frame = 0
BLAST of MS017326 vs. ExPASy Swiss-Prot
Match: Q9M5L0 (60S ribosomal protein L35 OS=Euphorbia esula OX=3993 GN=RPL35 PE=2 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 7.5e-51 Identity = 112/122 (91.80%), Postives = 117/122 (95.90%), Query Frame = 0
BLAST of MS017326 vs. ExPASy Swiss-Prot
Match: Q9SF53 (60S ribosomal protein L35-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35A PE=2 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 1.1e-49 Identity = 110/122 (90.16%), Postives = 117/122 (95.90%), Query Frame = 0
BLAST of MS017326 vs. ExPASy Swiss-Prot
Match: Q9LZ41 (60S ribosomal protein L35-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35D PE=2 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 1.8e-49 Identity = 110/122 (90.16%), Postives = 115/122 (94.26%), Query Frame = 0
BLAST of MS017326 vs. ExPASy Swiss-Prot
Match: Q9M3D2 (60S ribosomal protein L35-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35C PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 3.5e-48 Identity = 108/122 (88.52%), Postives = 115/122 (94.26%), Query Frame = 0
BLAST of MS017326 vs. ExPASy TrEMBL
Match: A0A6J1CDN9 (60S ribosomal protein L35-2 OS=Momordica charantia OX=3673 GN=LOC111010277 PE=3 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 4.9e-53 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of MS017326 vs. ExPASy TrEMBL
Match: A0A0A0KLK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G178720 PE=3 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 7.0e-52 Identity = 120/122 (98.36%), Postives = 120/122 (98.36%), Query Frame = 0
BLAST of MS017326 vs. ExPASy TrEMBL
Match: A0A6J1BZV3 (60S ribosomal protein L35 OS=Momordica charantia OX=3673 GN=LOC111006751 PE=3 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 1.2e-51 Identity = 120/122 (98.36%), Postives = 121/122 (99.18%), Query Frame = 0
BLAST of MS017326 vs. ExPASy TrEMBL
Match: A0A6J1JVN4 (60S ribosomal protein L35 OS=Cucurbita maxima OX=3661 GN=LOC111488270 PE=3 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 2.0e-51 Identity = 119/122 (97.54%), Postives = 121/122 (99.18%), Query Frame = 0
BLAST of MS017326 vs. ExPASy TrEMBL
Match: A0A6J1FH81 (60S ribosomal protein L35 OS=Cucurbita moschata OX=3662 GN=LOC111445667 PE=3 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 2.0e-51 Identity = 119/122 (97.54%), Postives = 121/122 (99.18%), Query Frame = 0
BLAST of MS017326 vs. TAIR 10
Match: AT2G39390.1 (Ribosomal L29 family protein ) HSP 1 Score: 201.4 bits (511), Expect = 4.1e-52 Identity = 112/122 (91.80%), Postives = 118/122 (96.72%), Query Frame = 0
BLAST of MS017326 vs. TAIR 10
Match: AT3G09500.1 (Ribosomal L29 family protein ) HSP 1 Score: 197.2 bits (500), Expect = 7.7e-51 Identity = 110/122 (90.16%), Postives = 117/122 (95.90%), Query Frame = 0
BLAST of MS017326 vs. TAIR 10
Match: AT5G02610.1 (Ribosomal L29 family protein ) HSP 1 Score: 196.4 bits (498), Expect = 1.3e-50 Identity = 110/122 (90.16%), Postives = 115/122 (94.26%), Query Frame = 0
BLAST of MS017326 vs. TAIR 10
Match: AT3G55170.1 (Ribosomal L29 family protein ) HSP 1 Score: 192.2 bits (487), Expect = 2.5e-49 Identity = 108/122 (88.52%), Postives = 115/122 (94.26%), Query Frame = 0
BLAST of MS017326 vs. TAIR 10
Match: AT3G55170.2 (Ribosomal L29 family protein ) HSP 1 Score: 192.2 bits (487), Expect = 2.5e-49 Identity = 108/122 (88.52%), Postives = 115/122 (94.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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