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MS017321 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CCACTTTTTTGGTCGAGAACAATAGCAGCTAAATGTCCTAATACTACTACTTGGATCTGGAATCTTCATGTTGATGCTCATGGTTTTCATAGCCATACTAGTAATTTGGAGGAGTACTCGGCTAAG CCACTTTTTTGGTCGAGAACAATAGCAGCTAAATGTCCTAATACTACTACTTGGATCTGGAATCTTCATGTTGATGCTCATGGTTTTCATAGCCATACTAGTAATTTGGAGGAGTACTCGGCTAAG CCACTTTTTTGGTCGAGAACAATAGCAGCTAAATGTCCTAATACTACTACTTGGATCTGGAATCTTCATGTTGATGCTCATGGTTTTCATAGCCATACTAGTAATTTGGAGGAGTACTCGGCTAAG PLFWSRTIAAKCPNTTTWIWNLHVDAHGFHSHTSNLEEYSAK Homology
BLAST of MS017321 vs. NCBI nr
Match: CAC87904.1 (photosystem1 subunit A, partial [Amborella trichopoda]) HSP 1 Score: 65.5 bits (158), Expect = 1.3e-07 Identity = 30/42 (71.43%), Postives = 32/42 (76.19%), Query Frame = 0
BLAST of MS017321 vs. NCBI nr
Match: CAC87927.1 (photosystem1 subunit A, partial [Cryptomeria japonica]) HSP 1 Score: 64.3 bits (155), Expect = 2.8e-07 Identity = 28/42 (66.67%), Postives = 32/42 (76.19%), Query Frame = 0
BLAST of MS017321 vs. NCBI nr
Match: CAC87912.1 (photosystem1 subunit A, partial [Cleomella arborea]) HSP 1 Score: 63.5 bits (153), Expect = 4.9e-07 Identity = 29/42 (69.05%), Postives = 32/42 (76.19%), Query Frame = 0
BLAST of MS017321 vs. NCBI nr
Match: CAC87924.2 (photosystem1 subunit A, partial [Spathiphyllum sp. SM328]) HSP 1 Score: 63.5 bits (153), Expect = 4.9e-07 Identity = 29/42 (69.05%), Postives = 32/42 (76.19%), Query Frame = 0
BLAST of MS017321 vs. NCBI nr
Match: CAC87920.2 (photosystem1 subunit A, partial [Persea americana]) HSP 1 Score: 63.5 bits (153), Expect = 4.9e-07 Identity = 29/42 (69.05%), Postives = 32/42 (76.19%), Query Frame = 0
BLAST of MS017321 vs. ExPASy Swiss-Prot
Match: Q70Y03 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Amborella trichopoda OX=13333 GN=psaA PE=2 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 8.3e-10 Identity = 31/42 (73.81%), Postives = 33/42 (78.57%), Query Frame = 0
BLAST of MS017321 vs. ExPASy Swiss-Prot
Match: Q3V534 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Acorus calamus OX=4465 GN=psaA PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 3.2e-09 Identity = 30/42 (71.43%), Postives = 33/42 (78.57%), Query Frame = 0
BLAST of MS017321 vs. ExPASy Swiss-Prot
Match: A4QJB5 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Aethionema cordifolium OX=434059 GN=psaA PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 3.2e-09 Identity = 30/42 (71.43%), Postives = 33/42 (78.57%), Query Frame = 0
BLAST of MS017321 vs. ExPASy Swiss-Prot
Match: A4QJJ9 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Aethionema grandiflorum OX=72657 GN=psaA PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 3.2e-09 Identity = 30/42 (71.43%), Postives = 33/42 (78.57%), Query Frame = 0
BLAST of MS017321 vs. ExPASy Swiss-Prot
Match: A4QK18 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Arabis hirsuta OX=78191 GN=psaA PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 3.2e-09 Identity = 30/42 (71.43%), Postives = 33/42 (78.57%), Query Frame = 0
BLAST of MS017321 vs. ExPASy TrEMBL
Match: Q8MA52 (Photosystem I P700 chlorophyll a apoprotein A1 (Fragment) OS=Cryptomeria japonica OX=3369 GN=psaA PE=2 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.4e-07 Identity = 28/42 (66.67%), Postives = 32/42 (76.19%), Query Frame = 0
BLAST of MS017321 vs. ExPASy TrEMBL
Match: Q8M900 (Photosystem I P700 chlorophyll a apoprotein A1 (Fragment) OS=Saururus cernuus OX=13260 GN=psaA PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.4e-07 Identity = 29/42 (69.05%), Postives = 32/42 (76.19%), Query Frame = 0
BLAST of MS017321 vs. ExPASy TrEMBL
Match: Q8M9Q6 (Photosystem I P700 chlorophyll a apoprotein A1 (Fragment) OS=Fagus grandifolia OX=60423 GN=psaA PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.4e-07 Identity = 29/42 (69.05%), Postives = 32/42 (76.19%), Query Frame = 0
BLAST of MS017321 vs. ExPASy TrEMBL
Match: Q8M9R8 (Photosystem I P700 chlorophyll a apoprotein A1 (Fragment) OS=Eupomatia laurina OX=49863 GN=psaA PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.4e-07 Identity = 29/42 (69.05%), Postives = 32/42 (76.19%), Query Frame = 0
BLAST of MS017321 vs. ExPASy TrEMBL
Match: Q8MF88 (Photosystem I P700 chlorophyll a apoprotein A1 (Fragment) OS=Acorus calamus OX=4465 GN=psaA PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.4e-07 Identity = 29/42 (69.05%), Postives = 32/42 (76.19%), Query Frame = 0
BLAST of MS017321 vs. TAIR 10
Match: ATCG00350.1 (Photosystem I, PsaA/PsaB protein ) HSP 1 Score: 61.2 bits (147), Expect = 2.2e-10 Identity = 30/42 (71.43%), Postives = 33/42 (78.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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