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MS017301 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATCAAAATGGGGGAAACGAACGTGAGATTGAAGCTTGTGATAGAGTCGCACACAGAAAGAGTTGTCTATTGCGAAGCAGGGAAGAGCTTCGTCGACTTTCTTTTCGATCTACTTTCCCTCCCACTTGGGGCTGTAATTAGGCTGTTGAAAAAGGAAGCCATGGTGGGATGCTTGGGAAATCTCTACCACAGCATAGAAACCTTTAACCAAACATATATACACTCAAACGAGGCCAAAAACGCAGTCTTGAAACCAAAACTCTCGTTCAACTCCTCCACTACGCCCACGCTTTTGCCTTCATATGCTGAGACTCCGCAAACCCAAACCCAAACCCAAACCCAAACCCAAACCCAAACCCAAATCCAAATCCCCTCACGTGGCCCATTTTATTTTGGTTCTGATGAAGAATTTACTATTCGAAGTCCAAGGTCAAGTAGACAGTCATTTACTTTTGCAGGAAATGGTTCAACTGGATTATTTGGTTCTGCACGTTCTAATGAAGAAATAATTAGGAGCTCATCTCCACTCTCTGGGCACCATCCATGTCTAAGTCCACAGTCATTTACTTTTGCAGGAAATGATTCAACAACCACGTTTGAAAAAGTGGGATTTGTGGGGGGTTTGGCTACTTACATTGTCATGGATGACCTTACTGTCATGCCCACTTTTGAATTCTCCATCGTTACTCTTTTCAAACAGCTCAATATCAAAGATGTGAACTCTTTGGAGGAGAAGCTCATCACTTTGAATCATGACGAG ATCAAAATGGGGGAAACGAACGTGAGATTGAAGCTTGTGATAGAGTCGCACACAGAAAGAGTTGTCTATTGCGAAGCAGGGAAGAGCTTCGTCGACTTTCTTTTCGATCTACTTTCCCTCCCACTTGGGGCTGTAATTAGGCTGTTGAAAAAGGAAGCCATGGTGGGATGCTTGGGAAATCTCTACCACAGCATAGAAACCTTTAACCAAACATATATACACTCAAACGAGGCCAAAAACGCAGTCTTGAAACCAAAACTCTCGTTCAACTCCTCCACTACGCCCACGCTTTTGCCTTCATATGCTGAGACTCCGCAAACCCAAACCCAAACCCAAACCCAAACCCAAACCCAAACCCAAATCCAAATCCCCTCACGTGGCCCATTTTATTTTGGTTCTGATGAAGAATTTACTATTCGAAGTCCAAGGTCAAGTAGACAGTCATTTACTTTTGCAGGAAATGGTTCAACTGGATTATTTGGTTCTGCACGTTCTAATGAAGAAATAATTAGGAGCTCATCTCCACTCTCTGGGCACCATCCATGTCTAAGTCCACAGTCATTTACTTTTGCAGGAAATGATTCAACAACCACGTTTGAAAAAGTGGGATTTGTGGGGGGTTTGGCTACTTACATTGTCATGGATGACCTTACTGTCATGCCCACTTTTGAATTCTCCATCGTTACTCTTTTCAAACAGCTCAATATCAAAGATGTGAACTCTTTGGAGGAGAAGCTCATCACTTTGAATCATGACGAG ATCAAAATGGGGGAAACGAACGTGAGATTGAAGCTTGTGATAGAGTCGCACACAGAAAGAGTTGTCTATTGCGAAGCAGGGAAGAGCTTCGTCGACTTTCTTTTCGATCTACTTTCCCTCCCACTTGGGGCTGTAATTAGGCTGTTGAAAAAGGAAGCCATGGTGGGATGCTTGGGAAATCTCTACCACAGCATAGAAACCTTTAACCAAACATATATACACTCAAACGAGGCCAAAAACGCAGTCTTGAAACCAAAACTCTCGTTCAACTCCTCCACTACGCCCACGCTTTTGCCTTCATATGCTGAGACTCCGCAAACCCAAACCCAAACCCAAACCCAAACCCAAACCCAAACCCAAATCCAAATCCCCTCACGTGGCCCATTTTATTTTGGTTCTGATGAAGAATTTACTATTCGAAGTCCAAGGTCAAGTAGACAGTCATTTACTTTTGCAGGAAATGGTTCAACTGGATTATTTGGTTCTGCACGTTCTAATGAAGAAATAATTAGGAGCTCATCTCCACTCTCTGGGCACCATCCATGTCTAAGTCCACAGTCATTTACTTTTGCAGGAAATGATTCAACAACCACGTTTGAAAAAGTGGGATTTGTGGGGGGTTTGGCTACTTACATTGTCATGGATGACCTTACTGTCATGCCCACTTTTGAATTCTCCATCGTTACTCTTTTCAAACAGCTCAATATCAAAGATGTGAACTCTTTGGAGGAGAAGCTCATCACTTTGAATCATGACGAG IKMGETNVRLKLVIESHTERVVYCEAGKSFVDFLFDLLSLPLGAVIRLLKKEAMVGCLGNLYHSIETFNQTYIHSNEAKNAVLKPKLSFNSSTTPTLLPSYAETPQTQTQTQTQTQTQTQIQIPSRGPFYFGSDEEFTIRSPRSSRQSFTFAGNGSTGLFGSARSNEEIIRSSSPLSGHHPCLSPQSFTFAGNDSTTTFEKVGFVGGLATYIVMDDLTVMPTFEFSIVTLFKQLNIKDVNSLEEKLITLNHDE Homology
BLAST of MS017301 vs. NCBI nr
Match: XP_022139306.1 (uncharacterized protein LOC111010253 isoform X2 [Momordica charantia]) HSP 1 Score: 272.7 bits (696), Expect = 3.2e-69 Identity = 143/156 (91.67%), Postives = 143/156 (91.67%), Query Frame = 0
BLAST of MS017301 vs. NCBI nr
Match: XP_038891339.1 (uncharacterized protein LOC120080784 [Benincasa hispida] >XP_038891341.1 uncharacterized protein LOC120080784 [Benincasa hispida]) HSP 1 Score: 162.9 bits (411), Expect = 3.5e-36 Identity = 120/259 (46.33%), Postives = 154/259 (59.46%), Query Frame = 0
BLAST of MS017301 vs. NCBI nr
Match: XP_008465479.1 (PREDICTED: uncharacterized protein LOC103503094 [Cucumis melo] >KAA0062236.1 putative DNA polymerase zeta catalytic subunit [Cucumis melo var. makuwa]) HSP 1 Score: 151.8 bits (382), Expect = 8.2e-33 Identity = 107/253 (42.29%), Postives = 138/253 (54.55%), Query Frame = 0
BLAST of MS017301 vs. NCBI nr
Match: XP_031741245.1 (uncharacterized protein LOC105435653 [Cucumis sativus] >KAE8647978.1 hypothetical protein Csa_000490 [Cucumis sativus]) HSP 1 Score: 145.6 bits (366), Expect = 5.9e-31 Identity = 106/251 (42.23%), Postives = 138/251 (54.98%), Query Frame = 0
BLAST of MS017301 vs. NCBI nr
Match: XP_022138964.1 (uncharacterized protein LOC111010013 [Momordica charantia]) HSP 1 Score: 142.9 bits (359), Expect = 3.8e-30 Identity = 95/251 (37.85%), Postives = 140/251 (55.78%), Query Frame = 0
BLAST of MS017301 vs. ExPASy TrEMBL
Match: A0A6J1CCA1 (uncharacterized protein LOC111010253 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010253 PE=4 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 1.5e-69 Identity = 143/156 (91.67%), Postives = 143/156 (91.67%), Query Frame = 0
BLAST of MS017301 vs. ExPASy TrEMBL
Match: A0A5A7V731 (Putative DNA polymerase zeta catalytic subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold321G00410 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 4.0e-33 Identity = 107/253 (42.29%), Postives = 138/253 (54.55%), Query Frame = 0
BLAST of MS017301 vs. ExPASy TrEMBL
Match: A0A1S3CPD6 (uncharacterized protein LOC103503094 OS=Cucumis melo OX=3656 GN=LOC103503094 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 4.0e-33 Identity = 107/253 (42.29%), Postives = 138/253 (54.55%), Query Frame = 0
BLAST of MS017301 vs. ExPASy TrEMBL
Match: A0A6J1CBJ8 (uncharacterized protein LOC111010013 OS=Momordica charantia OX=3673 GN=LOC111010013 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 1.8e-30 Identity = 95/251 (37.85%), Postives = 140/251 (55.78%), Query Frame = 0
BLAST of MS017301 vs. ExPASy TrEMBL
Match: A0A7J9N5U0 (Uncharacterized protein (Fragment) OS=Gossypium schwendimanii OX=34291 GN=Goshw_009935 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 3.1e-30 Identity = 96/251 (38.25%), Postives = 134/251 (53.39%), Query Frame = 0
BLAST of MS017301 vs. TAIR 10
Match: AT3G09110.1 (Protein of unknown function (DUF674) ) HSP 1 Score: 67.0 bits (162), Expect = 2.5e-11 Identity = 34/82 (41.46%), Postives = 50/82 (60.98%), Query Frame = 0
BLAST of MS017301 vs. TAIR 10
Match: AT5G01130.1 (Protein of unknown function (DUF674) ) HSP 1 Score: 64.3 bits (155), Expect = 1.6e-10 Identity = 34/87 (39.08%), Postives = 49/87 (56.32%), Query Frame = 0
BLAST of MS017301 vs. TAIR 10
Match: AT5G43240.1 (Protein of unknown function (DUF674) ) HSP 1 Score: 63.5 bits (153), Expect = 2.7e-10 Identity = 29/83 (34.94%), Postives = 49/83 (59.04%), Query Frame = 0
BLAST of MS017301 vs. TAIR 10
Match: AT5G43240.3 (Protein of unknown function (DUF674) ) HSP 1 Score: 63.5 bits (153), Expect = 2.7e-10 Identity = 29/83 (34.94%), Postives = 49/83 (59.04%), Query Frame = 0
BLAST of MS017301 vs. TAIR 10
Match: AT5G01120.1 (Protein of unknown function (DUF674) ) HSP 1 Score: 61.6 bits (148), Expect = 1.0e-09 Identity = 28/83 (33.73%), Postives = 46/83 (55.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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