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MS017299 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTTTTTTTGTATTTTGCAGCTGACAGTAGCAAAAAGGCTGATCCCAAAGCTCAAGCCTTGAAGACTGCCAAGGCAGTCAAGTCTGGTCCAACTTTCAAGAAGAAGGCCAAGAAGATTAGAACATCGGTCACATTCCACAGGCCGAAGACATTGAAGAAGGATAGGAATCCCAAGTATCCTCGGATCAGTGCAACTCCGAGGAACAAGTTGGACCAATACCAAATTCTTAAATATCCACTGACCACCGAGTCTGCAATGAAGAAGATTGAGGATAACAACACCCTTGTTTTTATTGTCGATATTCGTGCTGACAAGAAAAAGATTAAAAATGCCGTGAAGAAGATGTATGATATTCAGACTAAGAAAGTGAACACTTTAATCAGGTATGCATGGTTCAGAAGTTTTGATGAACAGCAATTTAGGAACTATATTTGCTATTTTCAGTATACCATTATCATTTACAGAGAAGCTTGCTATGGTACTGAGGAAGGAATAGTCCATATCATTCTTTCTAGCTCTGCTGATAGAAATGCCTTAGCTCGGGTTGGATTTGCTGATTTTTTTTTTAATCTTTAATTTTATATATTTATACATAGTTTCTATTGATATTGGCTGGTCTAGTGGGGTCAAATAGGACCAATCTAAATGGCTTAGAGGGAATGGGTTCAAACTTGGTGTCATTATCTAGGATTTAATATCTTACGATTTACCTAGACAACTAAATATGGTAGGGTCAGATAGTTGTCTCGTGAGAATAGTCACAAGCTGGCTTAAAATTAAAAAAAATGTGGTTCTGTTGATTGATGAAAATACGAAATCTACGTTTCGATGATGAACGATTGAAATTCTGATGTATGATTCTAAATGGTTGCAGGCCAGATGGAACAAAGAAGGCATACGTTAGGTTAACCCCTGACTATGATGCCTTAGATGTGGCGAACAAGATCGGTATCATC TTTTTTTTTTTGTATTTTGCAGCTGACAGTAGCAAAAAGGCTGATCCCAAAGCTCAAGCCTTGAAGACTGCCAAGGCAGTCAAGTCTGGTCCAACTTTCAAGAAGAAGGCCAAGAAGATTAGAACATCGGTCACATTCCACAGGCCGAAGACATTGAAGAAGGATAGGAATCCCAAGTATCCTCGGATCAGTGCAACTCCGAGGAACAAGTTGGACCAATACCAAATTCTTAAATATCCACTGACCACCGAGTCTGCAATGAAGAAGATTGAGGATAACAACACCCTTGTTTTTATTGTCGATATTCGTGCTGACAAGAAAAAGATTAAAAATGCCGTGAAGAAGATGTATGATATTCAGACTAAGAAAGTGAACACTTTAATCAGGCCAGATGGAACAAAGAAGGCATACGTTAGGTTAACCCCTGACTATGATGCCTTAGATGTGGCGAACAAGATCGGTATCATC TTTTTTTTTTTGTATTTTGCAGCTGACAGTAGCAAAAAGGCTGATCCCAAAGCTCAAGCCTTGAAGACTGCCAAGGCAGTCAAGTCTGGTCCAACTTTCAAGAAGAAGGCCAAGAAGATTAGAACATCGGTCACATTCCACAGGCCGAAGACATTGAAGAAGGATAGGAATCCCAAGTATCCTCGGATCAGTGCAACTCCGAGGAACAAGTTGGACCAATACCAAATTCTTAAATATCCACTGACCACCGAGTCTGCAATGAAGAAGATTGAGGATAACAACACCCTTGTTTTTATTGTCGATATTCGTGCTGACAAGAAAAAGATTAAAAATGCCGTGAAGAAGATGTATGATATTCAGACTAAGAAAGTGAACACTTTAATCAGGCCAGATGGAACAAAGAAGGCATACGTTAGGTTAACCCCTGACTATGATGCCTTAGATGTGGCGAACAAGATCGGTATCATC FFFLYFAADSSKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKNAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII Homology
BLAST of MS017299 vs. NCBI nr
Match: XP_023548419.1 (60S ribosomal protein L23a-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 283.9 bits (725), Expect = 8.5e-73 Identity = 150/155 (96.77%), Postives = 151/155 (97.42%), Query Frame = 0
BLAST of MS017299 vs. NCBI nr
Match: XP_022995723.1 (60S ribosomal protein L23a [Cucurbita maxima]) HSP 1 Score: 281.6 bits (719), Expect = 4.2e-72 Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of MS017299 vs. NCBI nr
Match: XP_022139271.1 (60S ribosomal protein L23a [Momordica charantia]) HSP 1 Score: 281.2 bits (718), Expect = 5.5e-72 Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0
BLAST of MS017299 vs. NCBI nr
Match: KAG7031627.1 (60S ribosomal protein L23a, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 279.3 bits (713), Expect = 2.1e-71 Identity = 147/149 (98.66%), Postives = 148/149 (99.33%), Query Frame = 0
BLAST of MS017299 vs. NCBI nr
Match: XP_022957518.1 (60S ribosomal protein L23a-like [Cucurbita moschata]) HSP 1 Score: 279.3 bits (713), Expect = 2.1e-71 Identity = 147/149 (98.66%), Postives = 148/149 (99.33%), Query Frame = 0
BLAST of MS017299 vs. ExPASy Swiss-Prot
Match: Q9AT35 (60S ribosomal protein L23a OS=Daucus carota OX=4039 GN=RPL23A PE=2 SV=1) HSP 1 Score: 256.1 bits (653), Expect = 2.5e-67 Identity = 136/148 (91.89%), Postives = 141/148 (95.27%), Query Frame = 0
BLAST of MS017299 vs. ExPASy Swiss-Prot
Match: Q07761 (60S ribosomal protein L23a OS=Nicotiana tabacum OX=4097 GN=RPL23A PE=2 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 4.2e-67 Identity = 135/149 (90.60%), Postives = 140/149 (93.96%), Query Frame = 0
BLAST of MS017299 vs. ExPASy Swiss-Prot
Match: Q8LD46 (60S ribosomal protein L23a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL23AA PE=2 SV=2) HSP 1 Score: 251.9 bits (642), Expect = 4.7e-66 Identity = 133/148 (89.86%), Postives = 138/148 (93.24%), Query Frame = 0
BLAST of MS017299 vs. ExPASy Swiss-Prot
Match: O22644 (60S ribosomal protein L23A OS=Fritillaria agrestis OX=64177 GN=RPL23A PE=2 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 1.0e-65 Identity = 136/150 (90.67%), Postives = 139/150 (92.67%), Query Frame = 0
BLAST of MS017299 vs. ExPASy Swiss-Prot
Match: Q9M3C3 (60S ribosomal protein L23a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL23AB PE=2 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 5.2e-65 Identity = 132/148 (89.19%), Postives = 136/148 (91.89%), Query Frame = 0
BLAST of MS017299 vs. ExPASy TrEMBL
Match: A0A6J1K8U2 (50S ribosomal protein L23, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111491145 PE=3 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 2.0e-72 Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of MS017299 vs. ExPASy TrEMBL
Match: A0A6J1CC68 (50S ribosomal protein L23, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111010227 PE=3 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 2.7e-72 Identity = 148/149 (99.33%), Postives = 148/149 (99.33%), Query Frame = 0
BLAST of MS017299 vs. ExPASy TrEMBL
Match: A0A6J1DJ76 (50S ribosomal protein L23, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111021582 PE=3 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 1.0e-71 Identity = 146/149 (97.99%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of MS017299 vs. ExPASy TrEMBL
Match: A0A6J1H0G0 (50S ribosomal protein L23, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111458895 PE=3 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 1.0e-71 Identity = 147/149 (98.66%), Postives = 148/149 (99.33%), Query Frame = 0
BLAST of MS017299 vs. ExPASy TrEMBL
Match: A0A5D3C5W3 (50S ribosomal protein L23, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002640 PE=3 SV=1) HSP 1 Score: 277.3 bits (708), Expect = 3.8e-71 Identity = 145/149 (97.32%), Postives = 148/149 (99.33%), Query Frame = 0
BLAST of MS017299 vs. TAIR 10
Match: AT2G39460.1 (ribosomal protein L23AA ) HSP 1 Score: 251.9 bits (642), Expect = 3.3e-67 Identity = 133/148 (89.86%), Postives = 138/148 (93.24%), Query Frame = 0
BLAST of MS017299 vs. TAIR 10
Match: AT2G39460.2 (ribosomal protein L23AA ) HSP 1 Score: 251.9 bits (642), Expect = 3.3e-67 Identity = 133/148 (89.86%), Postives = 138/148 (93.24%), Query Frame = 0
BLAST of MS017299 vs. TAIR 10
Match: AT3G55280.1 (ribosomal protein L23AB ) HSP 1 Score: 248.4 bits (633), Expect = 3.7e-66 Identity = 132/148 (89.19%), Postives = 136/148 (91.89%), Query Frame = 0
BLAST of MS017299 vs. TAIR 10
Match: AT3G55280.2 (ribosomal protein L23AB ) HSP 1 Score: 248.4 bits (633), Expect = 3.7e-66 Identity = 132/148 (89.19%), Postives = 136/148 (91.89%), Query Frame = 0
BLAST of MS017299 vs. TAIR 10
Match: AT3G55280.3 (ribosomal protein L23AB ) HSP 1 Score: 237.3 bits (604), Expect = 8.5e-63 Identity = 128/148 (86.49%), Postives = 132/148 (89.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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