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MS017294 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTCTTCGAGTGCAAGACGTGCAATCGGCAATTTCCGTCGTTTCAGGCGCTCGGCGGCCACCGTGCGAGCCACAAGAAGCCGCGGATTGTCGGATCGGACGGCGGAAACTCCGAAGGATCGCAAGGATCTCCGATGAAGCCGAAGACGCACGAGTGTAGTATCTGCGGGTTGGAGTTCGCGATAGGGCAAGCGCTCGGAGGACATATGAGGAGACATAGAGCGACGACG GTCTTCGAGTGCAAGACGTGCAATCGGCAATTTCCGTCGTTTCAGGCGCTCGGCGGCCACCGTGCGAGCCACAAGAAGCCGCGGATTGTCGGATCGGACGGCGGAAACTCCGAAGGATCGCAAGGATCTCCGATGAAGCCGAAGACGCACGAGTGTAGTATCTGCGGGTTGGAGTTCGCGATAGGGCAAGCGCTCGGAGGACATATGAGGAGACATAGAGCGACGACG GTCTTCGAGTGCAAGACGTGCAATCGGCAATTTCCGTCGTTTCAGGCGCTCGGCGGCCACCGTGCGAGCCACAAGAAGCCGCGGATTGTCGGATCGGACGGCGGAAACTCCGAAGGATCGCAAGGATCTCCGATGAAGCCGAAGACGCACGAGTGTAGTATCTGCGGGTTGGAGTTCGCGATAGGGCAAGCGCTCGGAGGACATATGAGGAGACATAGAGCGACGACG VFECKTCNRQFPSFQALGGHRASHKKPRIVGSDGGNSEGSQGSPMKPKTHECSICGLEFAIGQALGGHMRRHRATT Homology
BLAST of MS017294 vs. NCBI nr
Match: XP_023545353.1 (zinc finger protein ZAT12-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 155.2 bits (391), Expect = 2.2e-34 Identity = 73/78 (93.59%), Postives = 74/78 (94.87%), Query Frame = 0
BLAST of MS017294 vs. NCBI nr
Match: XP_022957121.1 (zinc finger protein ZAT12-like [Cucurbita moschata]) HSP 1 Score: 155.2 bits (391), Expect = 2.2e-34 Identity = 73/78 (93.59%), Postives = 74/78 (94.87%), Query Frame = 0
BLAST of MS017294 vs. NCBI nr
Match: KAG6601010.1 (Zinc finger protein ZAT11, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 155.2 bits (391), Expect = 2.2e-34 Identity = 73/78 (93.59%), Postives = 74/78 (94.87%), Query Frame = 0
BLAST of MS017294 vs. NCBI nr
Match: KAG7031623.1 (Zinc finger protein ZAT11, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 155.2 bits (391), Expect = 2.2e-34 Identity = 73/78 (93.59%), Postives = 74/78 (94.87%), Query Frame = 0
BLAST of MS017294 vs. NCBI nr
Match: XP_022995602.1 (zinc finger protein ZAT12-like [Cucurbita maxima]) HSP 1 Score: 155.2 bits (391), Expect = 2.2e-34 Identity = 73/78 (93.59%), Postives = 74/78 (94.87%), Query Frame = 0
BLAST of MS017294 vs. ExPASy Swiss-Prot
Match: Q681X4 (Zinc finger protein ZAT5 OS=Arabidopsis thaliana OX=3702 GN=ZAT5 PE=2 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 1.8e-18 Identity = 53/100 (53.00%), Postives = 56/100 (56.00%), Query Frame = 0
BLAST of MS017294 vs. ExPASy Swiss-Prot
Match: Q42453 (Zinc finger protein ZAT7 OS=Arabidopsis thaliana OX=3702 GN=ZAT7 PE=2 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 1.8e-18 Identity = 43/73 (58.90%), Postives = 53/73 (72.60%), Query Frame = 0
BLAST of MS017294 vs. ExPASy Swiss-Prot
Match: Q42410 (Zinc finger protein ZAT12 OS=Arabidopsis thaliana OX=3702 GN=ZAT12 PE=2 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 2.3e-18 Identity = 48/75 (64.00%), Postives = 51/75 (68.00%), Query Frame = 0
BLAST of MS017294 vs. ExPASy Swiss-Prot
Match: Q9LFG0 (Zinc finger protein ZAT18 OS=Arabidopsis thaliana OX=3702 GN=ZAT18 PE=2 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 2.6e-17 Identity = 41/74 (55.41%), Postives = 52/74 (70.27%), Query Frame = 0
BLAST of MS017294 vs. ExPASy Swiss-Prot
Match: Q9LX85 (Zinc finger protein ZAT8 OS=Arabidopsis thaliana OX=3702 GN=ZAT8 PE=2 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 2.6e-17 Identity = 47/77 (61.04%), Postives = 55/77 (71.43%), Query Frame = 0
BLAST of MS017294 vs. ExPASy TrEMBL
Match: A0A6J1JZD8 (zinc finger protein ZAT12-like OS=Cucurbita maxima OX=3661 GN=LOC111491061 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.1e-34 Identity = 73/78 (93.59%), Postives = 74/78 (94.87%), Query Frame = 0
BLAST of MS017294 vs. ExPASy TrEMBL
Match: A0A6J1GYC8 (zinc finger protein ZAT12-like OS=Cucurbita moschata OX=3662 GN=LOC111458600 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.1e-34 Identity = 73/78 (93.59%), Postives = 74/78 (94.87%), Query Frame = 0
BLAST of MS017294 vs. ExPASy TrEMBL
Match: A0A5D3CS99 (Zinc finger protein ZAT12-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3369G00090 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 7.0e-34 Identity = 72/78 (92.31%), Postives = 73/78 (93.59%), Query Frame = 0
BLAST of MS017294 vs. ExPASy TrEMBL
Match: A0A0A0KLU2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G180920 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 7.0e-34 Identity = 72/78 (92.31%), Postives = 73/78 (93.59%), Query Frame = 0
BLAST of MS017294 vs. ExPASy TrEMBL
Match: A0A1S3CF73 (zinc finger protein ZAT12-like OS=Cucumis melo OX=3656 GN=LOC103500198 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 7.0e-34 Identity = 72/78 (92.31%), Postives = 73/78 (93.59%), Query Frame = 0
BLAST of MS017294 vs. TAIR 10
Match: AT2G28710.1 (C2H2-type zinc finger family protein ) HSP 1 Score: 96.3 bits (238), Expect = 1.1e-20 Identity = 44/73 (60.27%), Postives = 52/73 (71.23%), Query Frame = 0
BLAST of MS017294 vs. TAIR 10
Match: AT2G28200.1 (C2H2-type zinc finger family protein ) HSP 1 Score: 92.8 bits (229), Expect = 1.3e-19 Identity = 53/100 (53.00%), Postives = 56/100 (56.00%), Query Frame = 0
BLAST of MS017294 vs. TAIR 10
Match: AT3G46090.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 92.8 bits (229), Expect = 1.3e-19 Identity = 43/73 (58.90%), Postives = 53/73 (72.60%), Query Frame = 0
BLAST of MS017294 vs. TAIR 10
Match: AT5G59820.1 (C2H2-type zinc finger family protein ) HSP 1 Score: 92.4 bits (228), Expect = 1.6e-19 Identity = 48/75 (64.00%), Postives = 51/75 (68.00%), Query Frame = 0
BLAST of MS017294 vs. TAIR 10
Match: AT5G03510.1 (C2H2-type zinc finger family protein ) HSP 1 Score: 91.7 bits (226), Expect = 2.8e-19 Identity = 49/102 (48.04%), Postives = 57/102 (55.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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