MS017274 (gene) Bitter gourd (TR) v1

Overview


Name	MS017274
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Location	scaffold33: 1220135 .. 1221463 (-)
RNA-Seq Expression	MS017274
Synteny	MS017274

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCCAAAGAAGAAAAGGTATTCGTGTTTGTGCAGATGGTTGTGTTGGAGCCTCTCCATTATTTTGGTTCTACTGATCGTCGTCGGAGCCGTCGTCGGAATTCTGTATCTCGTTTTCAAGCCTAAGATTCCGGCGTACTCCGTCGACTCCTTGAACATCAGTGACCTCCGCCTCAATTTCGACATGTCGCTCTACGCCAGGTTTGCCCACACTACGGACTTCAAATTTTGTAGCTATATTATTTTATATATGGACAAAGTTTTACCTCCTAAAATTTTCACAGAAAAATTAGAGAAGAAGTTTGAATATATATTTTACATCTTAATGTTTAATAGTACATTTTAATATTTTTCTCATTATACTATTTTTATTTTGGTAAATATTAAAATTAGTTTACAATCAATTTAGAAAAATATTTGTAAGTTGATATCTTGTCCTAACTACTATTCAAACGTCTGAGGAGTGAGGGAAGTATAAGAATAAGTATTTTTTTTTAAATAATGGGCTGCTAATTTTTTTTAATAGTGATTAGAATATAAGAGATAAATTATCACCAATGAGGACGTAAGTATTTTCTATAAATTTATATAATAACATATTTATAGAAATTTAGAGGATAGATTAATTAAGCCGCATAAGAGAGGAAACATTAAAATTTATGCCAATTTCTTAAAAATTTGGAGGAGATATTAGAACCTATATCCTATTTTAGTAAGTACTATATCTTATAAAAATTTAAATACTCTTTGTACTTTTGAAAAACAGAGAAAAAAAAATTAAAATCTCATTATTTAAATTTATCTCTTTTATTTTTAAAAATTTTAATGGCAGTCAATAGATAGTGAAAGATCGTAGGACAATATTTAAGTTGTTCTAAACTTAAATGAGACAATTCCTCACTTCTTCCTTCTTGGCTCCGCTCTTGCTTGTAGGTTCGATGTGAAGATAACGGCGTACAACCCGAACGAGAAGATCGGAATATACTACGAAAAGGGAGGAGTTTTGAGCGTTTGGTACACTGAGAACAAGCTTTGTGAAGGGTCACTGCCGGCGTTCTACCACGGCCACCGGAACAAGACGGCGTTGGACGTGGATTTGACCGGGAGGACGGTGTACGGAAGCACTTTGATGGCGGCGCTGGTGGAGCAACAGCGGACGGGGCGCATCCCGCTGCAGCTCCGGGCGGCGGCGCCAGTGGCCGTGAAATTGGGGAAGTTGAAGCTTAAGAAAGTTAAGATCTTGGGGGAATGCTTGTTGGTGGTGGATAGCTTGACTGCCAATAATGCCATTAGTATTAAAGCTAGTAATTGTAAATTCAAGTTAAAGCTC

mRNA sequence

CCTCCAAAGAAGAAAAGGTATTCGTGTTTGTGCAGATGGTTGTGTTGGAGCCTCTCCATTATTTTGGTTCTACTGATCGTCGTCGGAGCCGTCGTCGGAATTCTGTATCTCGTTTTCAAGCCTAAGATTCCGGCGTACTCCGTCGACTCCTTGAACATCAGTGACCTCCGCCTCAATTTCGACATGTCGCTCTACGCCAGGTTCGATGTGAAGATAACGGCGTACAACCCGAACGAGAAGATCGGAATATACTACGAAAAGGGAGGAGTTTTGAGCGTTTGGTACACTGAGAACAAGCTTTGTGAAGGGTCACTGCCGGCGTTCTACCACGGCCACCGGAACAAGACGGCGTTGGACGTGGATTTGACCGGGAGGACGGTGTACGGAAGCACTTTGATGGCGGCGCTGGTGGAGCAACAGCGGACGGGGCGCATCCCGCTGCAGCTCCGGGCGGCGGCGCCAGTGGCCGTGAAATTGGGGAAGTTGAAGCTTAAGAAAGTTAAGATCTTGGGGGAATGCTTGTTGGTGGTGGATAGCTTGACTGCCAATAATGCCATTAGTATTAAAGCTAGTAATTGTAAATTCAAGTTAAAGCTC

Coding sequence (CDS)

CCTCCAAAGAAGAAAAGGTATTCGTGTTTGTGCAGATGGTTGTGTTGGAGCCTCTCCATTATTTTGGTTCTACTGATCGTCGTCGGAGCCGTCGTCGGAATTCTGTATCTCGTTTTCAAGCCTAAGATTCCGGCGTACTCCGTCGACTCCTTGAACATCAGTGACCTCCGCCTCAATTTCGACATGTCGCTCTACGCCAGGTTCGATGTGAAGATAACGGCGTACAACCCGAACGAGAAGATCGGAATATACTACGAAAAGGGAGGAGTTTTGAGCGTTTGGTACACTGAGAACAAGCTTTGTGAAGGGTCACTGCCGGCGTTCTACCACGGCCACCGGAACAAGACGGCGTTGGACGTGGATTTGACCGGGAGGACGGTGTACGGAAGCACTTTGATGGCGGCGCTGGTGGAGCAACAGCGGACGGGGCGCATCCCGCTGCAGCTCCGGGCGGCGGCGCCAGTGGCCGTGAAATTGGGGAAGTTGAAGCTTAAGAAAGTTAAGATCTTGGGGGAATGCTTGTTGGTGGTGGATAGCTTGACTGCCAATAATGCCATTAGTATTAAAGCTAGTAATTGTAAATTCAAGTTAAAGCTC

Protein sequence

PPKKKRYSCLCRWLCWSLSIILVLLIVVGAVVGILYLVFKPKIPAYSVDSLNISDLRLNFDMSLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDVDLTGRTVYGSTLMAALVEQQRTGRIPLQLRAAAPVAVKLGKLKLKKVKILGECLLVVDSLTANNAISIKASNCKFKLKL

Homology

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BLAST of MS017274 vs. NCBI nr
Match: XP_022139245.1 (NDR1/HIN1-like protein 6 [Momordica charantia])

HSP 1 Score: 391.7 bits (1005), Expect = 3.7e-105
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   PPKKKRYSCLCRWLCWSLSIILVLLIVVGAVVGILYLVFKPKIPAYSVDSLNISDLRLNF 60
           PPKKKRYSCLCRWLCWSLSIILVLLIVVGAVVGILYLVFKPKIPAYSVDSLNISDLRLNF
Sbjct: 33  PPKKKRYSCLCRWLCWSLSIILVLLIVVGAVVGILYLVFKPKIPAYSVDSLNISDLRLNF 92

Query: 61  DMSLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDV 120
           DMSLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDV
Sbjct: 93  DMSLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDV 152

Query: 121 DLTGRTVYGSTLMAALVEQQRTGRIPLQLRAAAPVAVKLGKLKLKKVKILGECLLVVDSL 180
           DLTGRTVYGSTLMAALVEQQRTGRIPLQLRAAAPVAVKLGKLKLKKVKILGECLLVVDSL
Sbjct: 153 DLTGRTVYGSTLMAALVEQQRTGRIPLQLRAAAPVAVKLGKLKLKKVKILGECLLVVDSL 212

Query: 181 TANNAISIKASNCKFKLKL 200
           TANNAISIKASNCKFKLKL
Sbjct: 213 TANNAISIKASNCKFKLKL 231

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BLAST of MS017274 vs. NCBI nr
Match: XP_011656174.1 (NDR1/HIN1-like protein 6 [Cucumis sativus] >KGN50557.1 hypothetical protein Csa_021461 [Cucumis sativus])

HSP 1 Score: 345.9 bits (886), Expect = 2.3e-91
Identity = 172/198 (86.87%), Postives = 188/198 (94.95%), Query Frame = 0


Query: 2   PKKKRYSCLCRWLCWSLSIILVLLIVVGAVVGILYLVFKPKIPAYSVDSLNISDLRLNFD 61
           P KKR SCLCR LC++  +IL+LLI++GAV+GILYLVFKPKIP +S+DSLNISDLRLNFD
Sbjct: 42  PPKKRRSCLCRCLCYTFCLILLLLIILGAVIGILYLVFKPKIPTFSIDSLNISDLRLNFD 101

Query: 62  MSLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDVD 121
           MSLYARFDVKIT YNPNEKIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDV 
Sbjct: 102 MSLYARFDVKITTYNPNEKIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDVV 161

Query: 122 LTGRTVYGSTLMAALVEQQRTGRIPLQLRAAAPVAVKLGKLKLKKVKILGECLLVVDSLT 181
           LTGRTVYGSTLM+ALVEQQ+TGRIPLQL+A APVAVK+GK+KLKKVKILG CLLVVDSLT
Sbjct: 162 LTGRTVYGSTLMSALVEQQQTGRIPLQLQAVAPVAVKMGKMKLKKVKILGNCLLVVDSLT 221

Query: 182 ANNAISIKASNCKFKLKL 200
           ANNAI+IKASNCKF+LKL
Sbjct: 222 ANNAITIKASNCKFRLKL 239

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BLAST of MS017274 vs. NCBI nr
Match: XP_008461681.1 (PREDICTED: NDR1/HIN1-Like protein 3 [Cucumis melo] >KAA0050323.1 NDR1/HIN1-Like protein 3 [Cucumis melo var. makuwa] >TYK03541.1 NDR1/HIN1-Like protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 341.7 bits (875), Expect = 4.4e-90
Identity = 171/198 (86.36%), Postives = 186/198 (93.94%), Query Frame = 0


Query: 2   PKKKRYSCLCRWLCWSLSIILVLLIVVGAVVGILYLVFKPKIPAYSVDSLNISDLRLNFD 61
           P KKR S LCR LC+S  +IL++LI++GAV+GILYLVFKPKIP +S+DSLNISDLRLNFD
Sbjct: 41  PPKKRRSYLCRCLCYSFCLILLILIILGAVIGILYLVFKPKIPTFSIDSLNISDLRLNFD 100

Query: 62  MSLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDVD 121
           MSLYARFDVKIT YNPNEKIGIYYEKGGVLSVWYTENKLCEGSLP FYHGHRNKTALDV 
Sbjct: 101 MSLYARFDVKITTYNPNEKIGIYYEKGGVLSVWYTENKLCEGSLPEFYHGHRNKTALDVV 160

Query: 122 LTGRTVYGSTLMAALVEQQRTGRIPLQLRAAAPVAVKLGKLKLKKVKILGECLLVVDSLT 181
           LTGRTVYGSTLM+ALVEQQ+TGRIPLQLRA APVAVK+GK+KLKKVKILG CLLVVDSLT
Sbjct: 161 LTGRTVYGSTLMSALVEQQQTGRIPLQLRAVAPVAVKMGKMKLKKVKILGNCLLVVDSLT 220

Query: 182 ANNAISIKASNCKFKLKL 200
           ANNAI+IKASNCKF+LKL
Sbjct: 221 ANNAITIKASNCKFRLKL 238

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BLAST of MS017274 vs. NCBI nr
Match: XP_022996441.1 (NDR1/HIN1-like protein 6 [Cucurbita maxima])

HSP 1 Score: 339.7 bits (870), Expect = 1.7e-89
Identity = 169/199 (84.92%), Postives = 184/199 (92.46%), Query Frame = 0


Query: 1   PPKKKRYSCLCRWLCWSLSIILVLLIVVGAVVGILYLVFKPKIPAYSVDSLNISDLRLNF 60
           P KK R SC+C+  CW+  +I +LLIV+G VVGILYLVFKPKIP YS++SL ISDLRLN 
Sbjct: 34  PSKKTRSSCVCKCFCWTFCVIFLLLIVIGGVVGILYLVFKPKIPTYSINSLTISDLRLNV 93

Query: 61  DMSLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDV 120
           DMSLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYT+ KLC+GSLPAFYHGHRN+TALDV
Sbjct: 94  DMSLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYTDKKLCQGSLPAFYHGHRNRTALDV 153

Query: 121 DLTGRTVYGSTLMAALVEQQRTGRIPLQLRAAAPVAVKLGKLKLKKVKILGECLLVVDSL 180
           DLTGRTV G+TLMAALVEQQRTGRIPLQLRAAAPVAVKLG+LKLKKVKILG CLLVVDSL
Sbjct: 154 DLTGRTVKGNTLMAALVEQQRTGRIPLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSL 213

Query: 181 TANNAISIKASNCKFKLKL 200
           TANNAISIKASNCKF+LK+
Sbjct: 214 TANNAISIKASNCKFRLKI 232

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BLAST of MS017274 vs. NCBI nr
Match: XP_023515288.1 (NDR1/HIN1-like protein 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 338.2 bits (866), Expect = 4.8e-89
Identity = 168/199 (84.42%), Postives = 184/199 (92.46%), Query Frame = 0


Query: 1   PPKKKRYSCLCRWLCWSLSIILVLLIVVGAVVGILYLVFKPKIPAYSVDSLNISDLRLNF 60
           P KK R SC+C+  CW+  +I +LLIV+G VVGILYLVFKPKIP YS++SL ISDLRLN 
Sbjct: 38  PSKKTRSSCVCKCFCWTFCVIFLLLIVIGGVVGILYLVFKPKIPTYSINSLTISDLRLNV 97

Query: 61  DMSLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDV 120
           DMSLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYT+ KLC+GSLPAFYHGHRN+TALDV
Sbjct: 98  DMSLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYTDKKLCQGSLPAFYHGHRNRTALDV 157

Query: 121 DLTGRTVYGSTLMAALVEQQRTGRIPLQLRAAAPVAVKLGKLKLKKVKILGECLLVVDSL 180
           DLTGRTV G+TLMAALVEQQRTGRIPLQLRAAAPVAVKLG+LKLKKVKILG CLLVVDSL
Sbjct: 158 DLTGRTVKGNTLMAALVEQQRTGRIPLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSL 217

Query: 181 TANNAISIKASNCKFKLKL 200
           +ANNAISIKASNCKF+LK+
Sbjct: 218 SANNAISIKASNCKFRLKI 236

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BLAST of MS017274 vs. ExPASy Swiss-Prot
Match: Q8LD98 (NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 9.0e-54
Identity = 109/199 (54.77%), Postives = 139/199 (69.85%), Query Frame = 0


Query: 2   PKKKRYSCLCRWLCWSLSIILVLLIVVGAVVGILYLVFKPKIPAYSVDSLNISDLRLNFD 61
           P KKR SC CR  C++   +L+L++ VGA +GILYLVFKPK+P YS+D L ++   LN D
Sbjct: 54  PPKKRRSCCCRCFCYTFCFLLLLVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALNQD 113

Query: 62  MSLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDVD 121
            SL   F+V ITA NPNEKIGIYYE G  ++VWY E++L  GSLP FY GH N T + V+
Sbjct: 114 SSLTTAFNVTITAKNPNEKIGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVIYVE 173

Query: 122 LTGRTVYGSTLMAALVE-QQRTGRIPLQLRAAAPVAVKLGKLKLKKVKILGECLLVVDSL 181
           +TG+T   S L   L E QQRTG IPL++R   PV VK GKLKL +V+ L  C + VDSL
Sbjct: 174 MTGQTQNASGLRTTLEEQQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCGVFVDSL 233

Query: 182 TANNAISIKASNCKFKLKL 200
             NN I I++S+CKF+L+L
Sbjct: 234 ATNNVIKIQSSSCKFRLRL 252

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BLAST of MS017274 vs. ExPASy Swiss-Prot
Match: Q9ZVD2 (NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.0e-20
Identity = 55/185 (29.73%), Postives = 103/185 (55.68%), Query Frame = 0


Query: 3   KKKRYSCLCRWLCWSLSIILVLLIVVGAVVGILYLVFKPKIPAYSVDSLNISDLRLNFDM 62
           K  R +C C   C  L+ + +L+++ G    +LYL+++P+ P YS++  ++S + LN   
Sbjct: 65  KTNRSNCRC-CFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTS 124

Query: 63  SLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDVDL 122
            +   F+V + + N N KIG+YYEK   + V+Y +  +  G +P FY   +N T + + L
Sbjct: 125 PISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVL 184

Query: 123 TGRTVYGSTLMAALVEQQRTGR-IPLQLRAAAPVAVKLGKLKLKKVKILGECLLVVDSLT 182
           +G  +  ++ M   +  + + + +P +L+  APV +K G +K   + +  +C + VD LT
Sbjct: 185 SGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLT 244

Query: 183 ANNAI 187
           A + I
Sbjct: 245 APSRI 248

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BLAST of MS017274 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 9.4e-11
Identity = 51/199 (25.63%), Postives = 95/199 (47.74%), Query Frame = 0


Query: 8   SCLCRWLCWSLSIILVLLIVVGAVVG----ILYLVFKPKIPAYSVDSLNISDLRLNFDMS 67
           SCL    C  LS+I  +LI V  ++G    IL+L+F+P    + V   N++    + + +
Sbjct: 42  SCLRCCGCCILSLICNILIAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNN 101

Query: 68  LYARFDVKITAYNPNEKIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDVDLT 127
           L+   D+  T  NPN+++G+YY++  V S +Y + +    ++ +FY GH+N T +   + 
Sbjct: 102 LHYSLDLNFTIRNPNQRVGVYYDEFSV-SGYYGDQRFGSANVSSFYQGHKNTTVILTKIE 161

Query: 128 GR--TVYGSTLMAALVEQQRTGRIPLQLRAAAPVAVKLGKLKLKKVKILGEC---LLVVD 187
           G+   V G      L + +++G   +  +    V  K   +K  K+K   +C    + + 
Sbjct: 162 GQNLVVLGDGARTDLKDDEKSGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCDDLKIPLG 221

Query: 188 SLTANNAISIKASNCKFKL 198
           S  +      +   C F L
Sbjct: 222 SSNSTGGFKFQPVQCDFDL 239

[Close]

BLAST of MS017274 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 6.7e-09
Identity = 39/142 (27.46%), Postives = 67/142 (47.18%), Query Frame = 0


Query: 1   PPKKKRYS-------------CLCRWLCWSLSIILVLLIVVGAVVG----ILYLVFKPKI 60
           PPKK  +S             CL    C  LS+I  +LI +  ++G    I++L+F+P  
Sbjct: 15  PPKKVSHSHGRRGGGCGCLGDCLGCCGCCILSVIFNILITIAVLLGIAALIIWLIFRPNA 74

Query: 61  PAYSVDSLNISDLRLNFDMSLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYTENKLCEG 120
             + V    +++  L+   +L    D+  T  NPN +IG+YY++  V   +  +      
Sbjct: 75  IKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIRNPNRRIGVYYDEIEVRGYYGDQRFGMSN 134

Query: 121 SLPAFYHGHRNKTALDVDLTGR 126
           ++  FY GH+N T +   L G+
Sbjct: 135 NISKFYQGHKNTTVVGTKLVGQ 156

[Close]

BLAST of MS017274 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.2e-07
Identity = 41/169 (24.26%), Postives = 79/169 (46.75%), Query Frame = 0


Query: 31  VVGILYLVFKPKIPAYSVDSLNISDLRLNFDMSLYARFDVKITAY--NPNEKIGIYYEKG 90
           ++ +++L+  P+ P +S+   +I  L L    +      V++T +  NPN+K+GIYY+K 
Sbjct: 41  IIFLVWLILHPERPEFSLTEADIYSLNLTTSSTHLLNSSVQLTLFSKNPNKKVGIYYDKL 100

Query: 91  GVLSVWYTENKLCEGSLPAFYHGHRNKTALDVDLTGRTVYGSTLMAALVEQQR-TGRIPL 150
            V + +  +    E SLP FY  H     L   L G  +  +      + ++R TG+I +
Sbjct: 101 LVYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELPVAQSFGYQISRERSTGKIII 160

Query: 151 QLRAAAPVAVKLGKLKLKKVKILGECLLVVD---SLTANNAISIKASNC 194
            ++    +  K+G       +    CL +V    ++T     S++ + C
Sbjct: 161 GMKMDGKLRWKIGTWVSGAYRFNVNCLAIVAFGMNMTTPPLASLQGTRC 209

[Close]

BLAST of MS017274 vs. ExPASy TrEMBL
Match: A0A6J1CBS7 (NDR1/HIN1-like protein 6 OS=Momordica charantia OX=3673 GN=LOC111010204 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 1.8e-105
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   PPKKKRYSCLCRWLCWSLSIILVLLIVVGAVVGILYLVFKPKIPAYSVDSLNISDLRLNF 60
           PPKKKRYSCLCRWLCWSLSIILVLLIVVGAVVGILYLVFKPKIPAYSVDSLNISDLRLNF
Sbjct: 33  PPKKKRYSCLCRWLCWSLSIILVLLIVVGAVVGILYLVFKPKIPAYSVDSLNISDLRLNF 92

Query: 61  DMSLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDV 120
           DMSLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDV
Sbjct: 93  DMSLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDV 152

Query: 121 DLTGRTVYGSTLMAALVEQQRTGRIPLQLRAAAPVAVKLGKLKLKKVKILGECLLVVDSL 180
           DLTGRTVYGSTLMAALVEQQRTGRIPLQLRAAAPVAVKLGKLKLKKVKILGECLLVVDSL
Sbjct: 153 DLTGRTVYGSTLMAALVEQQRTGRIPLQLRAAAPVAVKLGKLKLKKVKILGECLLVVDSL 212

Query: 181 TANNAISIKASNCKFKLKL 200
           TANNAISIKASNCKFKLKL
Sbjct: 213 TANNAISIKASNCKFKLKL 231

[Close]

BLAST of MS017274 vs. ExPASy TrEMBL
Match: A0A0A0KQ99 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G182130 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.1e-91
Identity = 172/198 (86.87%), Postives = 188/198 (94.95%), Query Frame = 0


Query: 2   PKKKRYSCLCRWLCWSLSIILVLLIVVGAVVGILYLVFKPKIPAYSVDSLNISDLRLNFD 61
           P KKR SCLCR LC++  +IL+LLI++GAV+GILYLVFKPKIP +S+DSLNISDLRLNFD
Sbjct: 42  PPKKRRSCLCRCLCYTFCLILLLLIILGAVIGILYLVFKPKIPTFSIDSLNISDLRLNFD 101

Query: 62  MSLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDVD 121
           MSLYARFDVKIT YNPNEKIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDV 
Sbjct: 102 MSLYARFDVKITTYNPNEKIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDVV 161

Query: 122 LTGRTVYGSTLMAALVEQQRTGRIPLQLRAAAPVAVKLGKLKLKKVKILGECLLVVDSLT 181
           LTGRTVYGSTLM+ALVEQQ+TGRIPLQL+A APVAVK+GK+KLKKVKILG CLLVVDSLT
Sbjct: 162 LTGRTVYGSTLMSALVEQQQTGRIPLQLQAVAPVAVKMGKMKLKKVKILGNCLLVVDSLT 221

Query: 182 ANNAISIKASNCKFKLKL 200
           ANNAI+IKASNCKF+LKL
Sbjct: 222 ANNAITIKASNCKFRLKL 239

[Close]

BLAST of MS017274 vs. ExPASy TrEMBL
Match: A0A5A7U340 (NDR1/HIN1-Like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00330 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.1e-90
Identity = 171/198 (86.36%), Postives = 186/198 (93.94%), Query Frame = 0


Query: 2   PKKKRYSCLCRWLCWSLSIILVLLIVVGAVVGILYLVFKPKIPAYSVDSLNISDLRLNFD 61
           P KKR S LCR LC+S  +IL++LI++GAV+GILYLVFKPKIP +S+DSLNISDLRLNFD
Sbjct: 41  PPKKRRSYLCRCLCYSFCLILLILIILGAVIGILYLVFKPKIPTFSIDSLNISDLRLNFD 100

Query: 62  MSLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDVD 121
           MSLYARFDVKIT YNPNEKIGIYYEKGGVLSVWYTENKLCEGSLP FYHGHRNKTALDV 
Sbjct: 101 MSLYARFDVKITTYNPNEKIGIYYEKGGVLSVWYTENKLCEGSLPEFYHGHRNKTALDVV 160

Query: 122 LTGRTVYGSTLMAALVEQQRTGRIPLQLRAAAPVAVKLGKLKLKKVKILGECLLVVDSLT 181
           LTGRTVYGSTLM+ALVEQQ+TGRIPLQLRA APVAVK+GK+KLKKVKILG CLLVVDSLT
Sbjct: 161 LTGRTVYGSTLMSALVEQQQTGRIPLQLRAVAPVAVKMGKMKLKKVKILGNCLLVVDSLT 220

Query: 182 ANNAISIKASNCKFKLKL 200
           ANNAI+IKASNCKF+LKL
Sbjct: 221 ANNAITIKASNCKFRLKL 238

[Close]

BLAST of MS017274 vs. ExPASy TrEMBL
Match: A0A1S3CFA6 (NDR1/HIN1-Like protein 3 OS=Cucumis melo OX=3656 GN=LOC103500225 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.1e-90
Identity = 171/198 (86.36%), Postives = 186/198 (93.94%), Query Frame = 0


Query: 2   PKKKRYSCLCRWLCWSLSIILVLLIVVGAVVGILYLVFKPKIPAYSVDSLNISDLRLNFD 61
           P KKR S LCR LC+S  +IL++LI++GAV+GILYLVFKPKIP +S+DSLNISDLRLNFD
Sbjct: 41  PPKKRRSYLCRCLCYSFCLILLILIILGAVIGILYLVFKPKIPTFSIDSLNISDLRLNFD 100

Query: 62  MSLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDVD 121
           MSLYARFDVKIT YNPNEKIGIYYEKGGVLSVWYTENKLCEGSLP FYHGHRNKTALDV 
Sbjct: 101 MSLYARFDVKITTYNPNEKIGIYYEKGGVLSVWYTENKLCEGSLPEFYHGHRNKTALDVV 160

Query: 122 LTGRTVYGSTLMAALVEQQRTGRIPLQLRAAAPVAVKLGKLKLKKVKILGECLLVVDSLT 181
           LTGRTVYGSTLM+ALVEQQ+TGRIPLQLRA APVAVK+GK+KLKKVKILG CLLVVDSLT
Sbjct: 161 LTGRTVYGSTLMSALVEQQQTGRIPLQLRAVAPVAVKMGKMKLKKVKILGNCLLVVDSLT 220

Query: 182 ANNAISIKASNCKFKLKL 200
           ANNAI+IKASNCKF+LKL
Sbjct: 221 ANNAITIKASNCKFRLKL 238

[Close]

BLAST of MS017274 vs. ExPASy TrEMBL
Match: A0A6J1K4R4 (NDR1/HIN1-like protein 6 OS=Cucurbita maxima OX=3661 GN=LOC111491664 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 8.1e-90
Identity = 169/199 (84.92%), Postives = 184/199 (92.46%), Query Frame = 0


Query: 1   PPKKKRYSCLCRWLCWSLSIILVLLIVVGAVVGILYLVFKPKIPAYSVDSLNISDLRLNF 60
           P KK R SC+C+  CW+  +I +LLIV+G VVGILYLVFKPKIP YS++SL ISDLRLN 
Sbjct: 34  PSKKTRSSCVCKCFCWTFCVIFLLLIVIGGVVGILYLVFKPKIPTYSINSLTISDLRLNV 93

Query: 61  DMSLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDV 120
           DMSLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYT+ KLC+GSLPAFYHGHRN+TALDV
Sbjct: 94  DMSLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYTDKKLCQGSLPAFYHGHRNRTALDV 153

Query: 121 DLTGRTVYGSTLMAALVEQQRTGRIPLQLRAAAPVAVKLGKLKLKKVKILGECLLVVDSL 180
           DLTGRTV G+TLMAALVEQQRTGRIPLQLRAAAPVAVKLG+LKLKKVKILG CLLVVDSL
Sbjct: 154 DLTGRTVKGNTLMAALVEQQRTGRIPLQLRAAAPVAVKLGQLKLKKVKILGNCLLVVDSL 213

Query: 181 TANNAISIKASNCKFKLKL 200
           TANNAISIKASNCKF+LK+
Sbjct: 214 TANNAISIKASNCKFRLKI 232

[Close]

BLAST of MS017274 vs. TAIR 10
Match: AT1G54540.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 241.1 bits (614), Expect = 7.5e-64
Identity = 116/198 (58.59%), Postives = 151/198 (76.26%), Query Frame = 0


Query: 2   PKKKRYSCLCRWLCWSLSIILVLLIVVGAVVGILYLVFKPKIPAYSVDSLNISDLRLNFD 61
           P K R  C C+  CW LS++++ LI +   V ++Y VF PK+P+Y V+SL +++L +N D
Sbjct: 43  PSKNRNMC-CKIFCWVLSLLVIALIALAIAVAVVYFVFHPKLPSYEVNSLRVTNLGINLD 102

Query: 62  MSLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDVD 121
           +SL A F V+ITA NPNEKIGIYYEKGG + VWY + KLCEG +P FY GHRN T L+V 
Sbjct: 103 LSLSAEFKVEITARNPNEKIGIYYEKGGHIGVWYDKTKLCEGPIPRFYQGHRNVTKLNVA 162

Query: 122 LTGRTVYGSTLMAALVEQQRTGRIPLQLRAAAPVAVKLGKLKLKKVKILGECLLVVDSLT 181
           LTGR  YG+T++AAL +QQ+TGR+PL L+  APVA+KLG LK+KK++ILG C LVVDSL+
Sbjct: 163 LTGRAQYGNTVLAALQQQQQTGRVPLDLKVNAPVAIKLGNLKMKKIRILGSCKLVVDSLS 222

Query: 182 ANNAISIKASNCKFKLKL 200
            NN I+IKAS+C FK KL
Sbjct: 223 TNNNINIKASDCSFKAKL 239

[Close]

BLAST of MS017274 vs. TAIR 10
Match: AT1G65690.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 211.5 bits (537), Expect = 6.4e-55
Identity = 109/199 (54.77%), Postives = 139/199 (69.85%), Query Frame = 0


Query: 2   PKKKRYSCLCRWLCWSLSIILVLLIVVGAVVGILYLVFKPKIPAYSVDSLNISDLRLNFD 61
           P KKR SC CR  C++   +L+L++ VGA +GILYLVFKPK+P YS+D L ++   LN D
Sbjct: 54  PPKKRRSCCCRCFCYTFCFLLLLVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALNQD 113

Query: 62  MSLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDVD 121
            SL   F+V ITA NPNEKIGIYYE G  ++VWY E++L  GSLP FY GH N T + V+
Sbjct: 114 SSLTTAFNVTITAKNPNEKIGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVIYVE 173

Query: 122 LTGRTVYGSTLMAALVE-QQRTGRIPLQLRAAAPVAVKLGKLKLKKVKILGECLLVVDSL 181
           +TG+T   S L   L E QQRTG IPL++R   PV VK GKLKL +V+ L  C + VDSL
Sbjct: 174 MTGQTQNASGLRTTLEEQQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCGVFVDSL 233

Query: 182 TANNAISIKASNCKFKLKL 200
             NN I I++S+CKF+L+L
Sbjct: 234 ATNNVIKIQSSSCKFRLRL 252

[Close]

BLAST of MS017274 vs. TAIR 10
Match: AT5G36970.1 (NDR1/HIN1-like 25 )

HSP 1 Score: 207.6 bits (527), Expect = 9.2e-54
Identity = 104/202 (51.49%), Postives = 146/202 (72.28%), Query Frame = 0


Query: 1   PPKKKR--YSCLCRWLCWSLSIILVLLIVVGAVVGILYLVFKPKIPAYSVDSLNISDLRL 60
           PP++K+   SC CR +C++L ++ +L+++VGA+VGILYLVF+PK P Y++D L ++  +L
Sbjct: 47  PPREKKGSRSCWCRCVCYTLLVLFLLIVIVGAIVGILYLVFRPKFPDYNIDRLQLTRFQL 106

Query: 61  NFDMSLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTAL 120
           N D+SL   F+V ITA NPNEKIGIYYE G  +SV Y + ++  GSLP FY GH N T +
Sbjct: 107 NQDLSLSTAFNVTITAKNPNEKIGIYYEDGSKISVLYMQTRISNGSLPKFYQGHENTTII 166

Query: 121 DVDLTGRTVYGSTLMAALVEQQR-TGRIPLQLRAAAPVAVKLGKLKLKKVKILGECLLVV 180
            V++TG T   ++LM  L EQQR TG IPL++R   PV +KLGKLKL KV+ L  C + V
Sbjct: 167 LVEMTGFTQNATSLMTTLQEQQRLTGSIPLRIRVTQPVRIKLGKLKLMKVRFLVRCGVSV 226

Query: 181 DSLTANNAISIKASNCKFKLKL 200
           DSL AN+ I +++SNCK++ +L
Sbjct: 227 DSLAANSVIRVRSSNCKYRFRL 248

[Close]

BLAST of MS017274 vs. TAIR 10
Match: AT5G21130.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 103.2 bits (256), Expect = 2.4e-22
Identity = 63/198 (31.82%), Postives = 101/198 (51.01%), Query Frame = 0


Query: 3   KKKRYSCLCRWLCWSLSIILVLLIVVGAVVGILYLVFKPKIPAYSVDSLNISDLRLNFDM 62
           +K   SC  R LC+SLS +L+++++     G  YLV++P  P +SV  ++++ + L    
Sbjct: 85  RKTNKSCCRRCLCYSLSALLIIIVLAAIAFGFFYLVYQPHKPQFSVSGVSVTGINLTSSS 144

Query: 63  SLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDVDL 122
                  +K+ + N   K+G+ YEKG    V++   KL  G   AF     N T +   L
Sbjct: 145 PFSPVIRIKLRSQNVKGKLGLIYEKGNEADVFFNGTKLGNGEFTAFKQPAGNVTVIVTVL 204

Query: 123 TGRTV-YGSTLMAALVEQQRTGRIPLQLRAAAPVAVKLGKLKLKKVKILGECLLVVDSLT 182
            G +V   S+    L E Q+ G++P  LR  APV  K+G +    + I  +C + VD LT
Sbjct: 205 KGSSVKLKSSSRKELTESQKKGKVPFGLRIKAPVKFKVGSVTTWTMTITVDCKITVDKLT 264

Query: 183 ANNAISIKASNCKFKLKL 200
           A  + ++K  NC+  L L
Sbjct: 265 A--SATVKTENCETGLSL 280

[Close]

BLAST of MS017274 vs. TAIR 10
Match: AT2G27080.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 101.7 bits (252), Expect = 7.1e-22
Identity = 55/185 (29.73%), Postives = 103/185 (55.68%), Query Frame = 0


Query: 3   KKKRYSCLCRWLCWSLSIILVLLIVVGAVVGILYLVFKPKIPAYSVDSLNISDLRLNFDM 62
           K  R +C C   C  L+ + +L+++ G    +LYL+++P+ P YS++  ++S + LN   
Sbjct: 65  KTNRSNCRC-CFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTS 124

Query: 63  SLYARFDVKITAYNPNEKIGIYYEKGGVLSVWYTENKLCEGSLPAFYHGHRNKTALDVDL 122
            +   F+V + + N N KIG+YYEK   + V+Y +  +  G +P FY   +N T + + L
Sbjct: 125 PISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVL 184

Query: 123 TGRTVYGSTLMAALVEQQRTGR-IPLQLRAAAPVAVKLGKLKLKKVKILGECLLVVDSLT 182
           +G  +  ++ M   +  + + + +P +L+  APV +K G +K   + +  +C + VD LT
Sbjct: 185 SGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLT 244

Query: 183 ANNAI 187
           A + I
Sbjct: 245 APSRI 248

The following BLAST results are available for this feature:

BLAST of MS017274 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139245.1	3.7e-105	100.00	NDR1/HIN1-like protein 6 [Momordica charantia]	[more]
XP_011656174.1	2.3e-91	86.87	NDR1/HIN1-like protein 6 [Cucumis sativus] >KGN50557.1 hypothetical protein Csa_...	[more]
XP_008461681.1	4.4e-90	86.36	PREDICTED: NDR1/HIN1-Like protein 3 [Cucumis melo] >KAA0050323.1 NDR1/HIN1-Like ...	[more]
XP_022996441.1	1.7e-89	84.92	NDR1/HIN1-like protein 6 [Cucurbita maxima]	[more]
XP_023515288.1	4.8e-89	84.42	NDR1/HIN1-like protein 6 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS017274 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LD98	9.0e-54	54.77	NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=NHL6 PE=1 SV=1	[more]
Q9ZVD2	1.0e-20	29.73	NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1	[more]
Q9SRN1	9.4e-11	25.63	NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1	[more]
Q9FNH6	6.7e-09	27.46	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]
Q9FI03	2.2e-07	24.26	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]

BLAST of MS017274 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CBS7	1.8e-105	100.00	NDR1/HIN1-like protein 6 OS=Momordica charantia OX=3673 GN=LOC111010204 PE=4 SV=...	[more]
A0A0A0KQ99	1.1e-91	86.87	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G182130 PE=4 ...	[more]
A0A5A7U340	2.1e-90	86.36	NDR1/HIN1-Like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CFA6	2.1e-90	86.36	NDR1/HIN1-Like protein 3 OS=Cucumis melo OX=3656 GN=LOC103500225 PE=4 SV=1	[more]
A0A6J1K4R4	8.1e-90	84.92	NDR1/HIN1-like protein 6 OS=Cucurbita maxima OX=3661 GN=LOC111491664 PE=4 SV=1	[more]

BLAST of MS017274 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54540.1	7.5e-64	58.59	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G65690.1	6.4e-55	54.77	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G36970.1	9.2e-54	51.49	NDR1/HIN1-like 25	[more]
AT5G21130.1	2.4e-22	31.82	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G27080.1	7.1e-22	29.73	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 71..166 e-value: 6.8E-9 score: 36.2
None	No IPR available	PANTHER	PTHR31852:SF195	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 4..197
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 4..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS017274.1	MS017274.1	mRNA