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MS017271 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATCGCAGCCATGGCGGAGGAGACGAAGGATGTTTGCCAGACACCGCGACGGAGAAGCTCTCGGACTCCGGTGGCTCCGTCGTGCCCGGCGGCGCCGAGGAAGAAGCCGGTTCGTATGAAACGGAAGGCTCCGCCGAAGGACGGGTACTTTCAGCCGCCGGATCTGGAGATTTTATTTGCTCAGAGACCAGAAGCTTGTGCT ATCGCAGCCATGGCGGAGGAGACGAAGGATGTTTGCCAGACACCGCGACGGAGAAGCTCTCGGACTCCGGTGGCTCCGTCGTGCCCGGCGGCGCCGAGGAAGAAGCCGGTTCGTATGAAACGGAAGGCTCCGCCGAAGGACGGGTACTTTCAGCCGCCGGATCTGGAGATTTTATTTGCTCAGAGACCAGAAGCTTGTGCT ATCGCAGCCATGGCGGAGGAGACGAAGGATGTTTGCCAGACACCGCGACGGAGAAGCTCTCGGACTCCGGTGGCTCCGTCGTGCCCGGCGGCGCCGAGGAAGAAGCCGGTTCGTATGAAACGGAAGGCTCCGCCGAAGGACGGGTACTTTCAGCCGCCGGATCTGGAGATTTTATTTGCTCAGAGACCAGAAGCTTGTGCT IAAMAEETKDVCQTPRRRSSRTPVAPSCPAAPRKKPVRMKRKAPPKDGYFQPPDLEILFAQRPEACA Homology
BLAST of MS017271 vs. NCBI nr
Match: KAG6600042.1 (Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030712.1 Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 91.3 bits (225), Expect = 3.5e-15 Identity = 43/56 (76.79%), Postives = 49/56 (87.50%), Query Frame = 0
BLAST of MS017271 vs. NCBI nr
Match: KAE8647993.1 (hypothetical protein Csa_021483 [Cucumis sativus]) HSP 1 Score: 90.1 bits (222), Expect = 7.7e-15 Identity = 45/66 (68.18%), Postives = 54/66 (81.82%), Query Frame = 0
BLAST of MS017271 vs. NCBI nr
Match: XP_021655298.1 (cyclin-dependent protein kinase inhibitor SMR4-like [Hevea brasiliensis]) HSP 1 Score: 83.6 bits (205), Expect = 7.2e-13 Identity = 43/64 (67.19%), Postives = 48/64 (75.00%), Query Frame = 0
BLAST of MS017271 vs. NCBI nr
Match: KDP44934.1 (hypothetical protein JCGZ_01434 [Jatropha curcas]) HSP 1 Score: 72.4 bits (176), Expect = 1.7e-09 Identity = 37/66 (56.06%), Postives = 41/66 (62.12%), Query Frame = 0
BLAST of MS017271 vs. NCBI nr
Match: EEF30808.1 (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 70.1 bits (170), Expect = 8.3e-09 Identity = 36/60 (60.00%), Postives = 43/60 (71.67%), Query Frame = 0
BLAST of MS017271 vs. ExPASy Swiss-Prot
Match: Q1JPP8 (Cyclin-dependent protein kinase inhibitor SMR4 OS=Arabidopsis thaliana OX=3702 GN=SMR4 PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.0e-09 Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = 0
BLAST of MS017271 vs. ExPASy Swiss-Prot
Match: Q9LNX4 (Cyclin-dependent protein kinase inhibitor SMR5 OS=Arabidopsis thaliana OX=3702 GN=SMR5 PE=1 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 4.4e-05 Identity = 24/52 (46.15%), Postives = 31/52 (59.62%), Query Frame = 0
BLAST of MS017271 vs. ExPASy TrEMBL
Match: A0A0A0KS84 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G182660 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 3.7e-15 Identity = 45/66 (68.18%), Postives = 54/66 (81.82%), Query Frame = 0
BLAST of MS017271 vs. ExPASy TrEMBL
Match: A0A067LKR5 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_01434 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 8.1e-10 Identity = 37/66 (56.06%), Postives = 41/66 (62.12%), Query Frame = 0
BLAST of MS017271 vs. ExPASy TrEMBL
Match: A0A6A1VY35 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR3G014739 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 4.0e-09 Identity = 35/71 (49.30%), Postives = 46/71 (64.79%), Query Frame = 0
BLAST of MS017271 vs. ExPASy TrEMBL
Match: B9T003 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0040060 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 4.0e-09 Identity = 36/60 (60.00%), Postives = 43/60 (71.67%), Query Frame = 0
BLAST of MS017271 vs. ExPASy TrEMBL
Match: A0A1U8A7K0 (cyclin-dependent protein kinase inhibitor SMR2 OS=Nelumbo nucifera OX=4432 GN=LOC104601057 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 5.2e-09 Identity = 34/65 (52.31%), Postives = 45/65 (69.23%), Query Frame = 0
BLAST of MS017271 vs. TAIR 10
Match: AT5G02220.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 63.5 bits (153), Expect = 7.2e-11 Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = 0
BLAST of MS017271 vs. TAIR 10
Match: AT3G27630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40460.1); Has 36 Blast hits to 36 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 41.2 bits (95), Expect = 3.8e-04 Identity = 25/58 (43.10%), Postives = 34/58 (58.62%), Query Frame = 0
BLAST of MS017271 vs. TAIR 10
Match: AT1G10690.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G60783.1); Has 59 Blast hits to 59 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 40.0 bits (92), Expect = 8.5e-04 Identity = 26/58 (44.83%), Postives = 31/58 (53.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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