![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
MS017270 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTCACTCACTTCAGTTCTCAAATGGCTTCTGTTTCCTCTGCCGTTGCGCCGCCGTTCTACCTGGAGGAGAAATGGAAGCTGTCGAAGAAGGAAGCTCCGGCGAGAAGCCGGTCGTCGGCGTCGTGTCCTCTGATGAGAAATTCGTCGGAGAGGAGATGTTCTTTCACCAGGAAATGTGCGAAATTGGTCAAAGAACAGAGGGCTCGATTCTACATCATGAGGAGATGCGTCACCATGCTCATCTGCTGGCATAACCACAGCGACTCC TTCACTCACTTCAGTTCTCAAATGGCTTCTGTTTCCTCTGCCGTTGCGCCGCCGTTCTACCTGGAGGAGAAATGGAAGCTGTCGAAGAAGGAAGCTCCGGCGAGAAGCCGGTCGTCGGCGTCGTGTCCTCTGATGAGAAATTCGTCGGAGAGGAGATGTTCTTTCACCAGGAAATGTGCGAAATTGGTCAAAGAACAGAGGGCTCGATTCTACATCATGAGGAGATGCGTCACCATGCTCATCTGCTGGCATAACCACAGCGACTCC TTCACTCACTTCAGTTCTCAAATGGCTTCTGTTTCCTCTGCCGTTGCGCCGCCGTTCTACCTGGAGGAGAAATGGAAGCTGTCGAAGAAGGAAGCTCCGGCGAGAAGCCGGTCGTCGGCGTCGTGTCCTCTGATGAGAAATTCGTCGGAGAGGAGATGTTCTTTCACCAGGAAATGTGCGAAATTGGTCAAAGAACAGAGGGCTCGATTCTACATCATGAGGAGATGCGTCACCATGCTCATCTGCTGGCATAACCACAGCGACTCC FTHFSSQMASVSSAVAPPFYLEEKWKLSKKEAPARSRSSASCPLMRNSSERRCSFTRKCAKLVKEQRARFYIMRRCVTMLICWHNHSDS Homology
BLAST of MS017270 vs. NCBI nr
Match: XP_022139156.1 (uncharacterized protein LOC111010130 [Momordica charantia]) HSP 1 Score: 162.2 bits (409), Expect = 2.1e-36 Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0
BLAST of MS017270 vs. NCBI nr
Match: XP_038889639.1 (uncharacterized protein LOC120079504 [Benincasa hispida] >XP_038889640.1 uncharacterized protein LOC120079504 [Benincasa hispida] >XP_038889641.1 uncharacterized protein LOC120079504 [Benincasa hispida] >XP_038889642.1 uncharacterized protein LOC120079504 [Benincasa hispida]) HSP 1 Score: 144.8 bits (364), Expect = 3.5e-31 Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 0
BLAST of MS017270 vs. NCBI nr
Match: KAG6600989.1 (hypothetical protein SDJN03_06222, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031601.1 hypothetical protein SDJN02_05642, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 144.8 bits (364), Expect = 3.5e-31 Identity = 75/87 (86.21%), Postives = 79/87 (90.80%), Query Frame = 0
BLAST of MS017270 vs. NCBI nr
Match: XP_008461687.1 (PREDICTED: uncharacterized protein LOC103500229 [Cucumis melo] >KAA0050338.1 uncharacterized protein E6C27_scaffold88G00650 [Cucumis melo var. makuwa] >TYK03552.1 uncharacterized protein E5676_scaffold293G00470 [Cucumis melo var. makuwa]) HSP 1 Score: 141.7 bits (356), Expect = 3.0e-30 Identity = 69/85 (81.18%), Postives = 78/85 (91.76%), Query Frame = 0
BLAST of MS017270 vs. NCBI nr
Match: XP_030489665.1 (uncharacterized protein LOC115706227 [Cannabis sativa] >KAF4351948.1 hypothetical protein G4B88_020576 [Cannabis sativa] >KAF4354477.1 hypothetical protein G4B88_019946 [Cannabis sativa] >KAF4365408.1 hypothetical protein F8388_012773 [Cannabis sativa] >KAF4386234.1 hypothetical protein F8388_016486 [Cannabis sativa]) HSP 1 Score: 125.6 bits (314), Expect = 2.2e-25 Identity = 65/94 (69.15%), Postives = 77/94 (81.91%), Query Frame = 0
BLAST of MS017270 vs. ExPASy Swiss-Prot
Match: Q8S8S3 (Small polypeptide DEVIL 11 OS=Arabidopsis thaliana OX=3702 GN=DVL11 PE=3 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 2.5e-16 Identity = 51/87 (58.62%), Postives = 59/87 (67.82%), Query Frame = 0
BLAST of MS017270 vs. ExPASy Swiss-Prot
Match: Q8L7D0 (Small polypeptide DEVIL 13 OS=Arabidopsis thaliana OX=3702 GN=DVL13 PE=3 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 2.7e-10 Identity = 39/86 (45.35%), Postives = 48/86 (55.81%), Query Frame = 0
BLAST of MS017270 vs. ExPASy Swiss-Prot
Match: Q6IM93 (Small polypeptide DEVIL 8 OS=Arabidopsis thaliana OX=3702 GN=DVL8 PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 3.6e-10 Identity = 32/64 (50.00%), Postives = 44/64 (68.75%), Query Frame = 0
BLAST of MS017270 vs. ExPASy Swiss-Prot
Match: Q8LE84 (Small polypeptide DEVIL 18 OS=Arabidopsis thaliana OX=3702 GN=DVL18 PE=2 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.0e-09 Identity = 26/57 (45.61%), Postives = 40/57 (70.18%), Query Frame = 0
BLAST of MS017270 vs. ExPASy Swiss-Prot
Match: Q6IM92 (Small polypeptide DEVIL 9 OS=Arabidopsis thaliana OX=3702 GN=DVL9 PE=1 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 1.5e-08 Identity = 36/77 (46.75%), Postives = 45/77 (58.44%), Query Frame = 0
BLAST of MS017270 vs. ExPASy TrEMBL
Match: A0A6J1CBU5 (uncharacterized protein LOC111010130 OS=Momordica charantia OX=3673 GN=LOC111010130 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 1.0e-36 Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0
BLAST of MS017270 vs. ExPASy TrEMBL
Match: A0A5A7U4Z4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00470 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.4e-30 Identity = 69/85 (81.18%), Postives = 78/85 (91.76%), Query Frame = 0
BLAST of MS017270 vs. ExPASy TrEMBL
Match: A0A1S3CF72 (uncharacterized protein LOC103500229 OS=Cucumis melo OX=3656 GN=LOC103500229 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.4e-30 Identity = 69/85 (81.18%), Postives = 78/85 (91.76%), Query Frame = 0
BLAST of MS017270 vs. ExPASy TrEMBL
Match: A0A0A0KQA4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G182670 PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 7.1e-30 Identity = 69/86 (80.23%), Postives = 78/86 (90.70%), Query Frame = 0
BLAST of MS017270 vs. ExPASy TrEMBL
Match: A0A7J6E7R9 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_012773 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 1.1e-25 Identity = 65/94 (69.15%), Postives = 77/94 (81.91%), Query Frame = 0
BLAST of MS017270 vs. TAIR 10
Match: AT2G39705.1 (ROTUNDIFOLIA like 8 ) HSP 1 Score: 85.9 bits (211), Expect = 1.8e-17 Identity = 51/87 (58.62%), Postives = 59/87 (67.82%), Query Frame = 0
BLAST of MS017270 vs. TAIR 10
Match: AT2G29125.1 (ROTUNDIFOLIA like 2 ) HSP 1 Score: 65.9 bits (159), Expect = 1.9e-11 Identity = 39/86 (45.35%), Postives = 48/86 (55.81%), Query Frame = 0
BLAST of MS017270 vs. TAIR 10
Match: AT3G55515.1 (ROTUNDIFOLIA like 7 ) HSP 1 Score: 65.5 bits (158), Expect = 2.5e-11 Identity = 32/64 (50.00%), Postives = 44/64 (68.75%), Query Frame = 0
BLAST of MS017270 vs. TAIR 10
Match: AT5G59510.1 (ROTUNDIFOLIA like 5 ) HSP 1 Score: 63.9 bits (154), Expect = 7.3e-11 Identity = 26/57 (45.61%), Postives = 40/57 (70.18%), Query Frame = 0
BLAST of MS017270 vs. TAIR 10
Match: AT1G07490.1 (ROTUNDIFOLIA like 3 ) HSP 1 Score: 60.1 bits (144), Expect = 1.1e-09 Identity = 36/77 (46.75%), Postives = 45/77 (58.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|