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MS017265 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAGGGTTTGCCTACTCTTCTTCTTCTTTTTCTTCTTGTGGTGCCTGCAAATTTCTAAGGCGAAAATGCAGTGATCAATGTGTTTTTGCTCCTTTCTTCAGCTATGAAGAAGCCACTTCCCATTTTGCAGCTGTTCACAAAGTGTTTGGTGCAAGTAATGTTTCGAAGCTTCTCTTACACCTCCCTGTGCACAATCGAAGCCACGCTGCCATTACTGTTGCTTATGAAGCTCTTGAGCGAATGCGAGATCCCACCTATGGCTGCATTGCTCACATCTTCGCATTGCAGCAAGAGGTTGTTCCAAAACCCTAAAAGTTTAAGCTAATAGATTAGGATAAATTTGATTTTTCATTCATATTCTTACCCCTCCTATTCGCGATCTTAGAAAATAGTGGGTGCAATATCCAATGAGTGATTATCAATAGTAAATAAGAAAAAAAATAACATCGCACTCATTTCAAATATAGATTCATGTTAAATCGTTACTTAACCTAGAAATAATTAATTTTATCTCAAAATCAATTGGCAATAAAAAGAGTAGCCTGGTTATAATATTAACTTTTGTTAAGGCCCATTATCTTTTCAGTGTGGGATCCTTTATAACATACATTTTCAAGATGTTGCTCTTTTGGGTTCACCAATCTTGGTCGGGTCTCTTTTTTTGATCGAATACTCGTTTGAGCTTTTAGGCTTTGATATTATCAATATTATTTATGAGGTTCAATCTCAAAATCAATTCACAATAACAGTAGTAGCGCACTTATAATATTATAAACCATTTTTGTTATATCTAATCTTTTTAACGTGAGATCCTTAACAATAACATATCGGTGTTCAAACACAATATTTTCTATTATATCAGGTTAAACCCACCTCCAAACCTAAAACCTACGTTGATGGACTACGACAAGTTCACTTTTTTATTCATATTCTTAACACTCTTCCCACTTTAACAACTCCATCGAATCTCCTTCTCGCAGGTTGCAAGCTTGCAAGAGGAGATAGAAATTCTCGGGAGCCAAATAGCCAACTTCGCCACTGCAACCGACACCGTTGCAACGACCGAGAATCCGTTTATAGAGCTCCAAGTCTCGCAGCAGCTGAGTGATTTTGTGATGAACACAGATGATTATCAAAATCATCTATTTTCTCAACTGCCTCACCAAACTTTTGATCATCGTGGCCAAAACGATGCTCAGATGATATCTCCATTGTGTTGCTTAGGGGAAGAAAATGGGTTTTTTGGGTGTAACCCAAATGCTATGGAGAACTTTGCTTCTTATCCATGG ATGACAGGGTTTGCCTACTCTTCTTCTTCTTTTTCTTCTTGTGGTGCCTGCAAATTTCTAAGGCGAAAATGCAGTGATCAATGTGTTTTTGCTCCTTTCTTCAGCTATGAAGAAGCCACTTCCCATTTTGCAGCTGTTCACAAAGTGTTTGGTGCAAGTAATGTTTCGAAGCTTCTCTTACACCTCCCTGTGCACAATCGAAGCCACGCTGCCATTACTGTTGCTTATGAAGCTCTTGAGCGAATGCGAGATCCCACCTATGGCTGCATTGCTCACATCTTCGCATTGCAGCAAGAGGTTGTTGCAAGCTTGCAAGAGGAGATAGAAATTCTCGGGAGCCAAATAGCCAACTTCGCCACTGCAACCGACACCGTTGCAACGACCGAGAATCCGTTTATAGAGCTCCAAGTCTCGCAGCAGCTGAGTGATTTTGTGATGAACACAGATGATTATCAAAATCATCTATTTTCTCAACTGCCTCACCAAACTTTTGATCATCGTGGCCAAAACGATGCTCAGATGATATCTCCATTGTGTTGCTTAGGGGAAGAAAATGGGTTTTTTGGGTGTAACCCAAATGCTATGGAGAACTTTGCTTCTTATCCATGG ATGACAGGGTTTGCCTACTCTTCTTCTTCTTTTTCTTCTTGTGGTGCCTGCAAATTTCTAAGGCGAAAATGCAGTGATCAATGTGTTTTTGCTCCTTTCTTCAGCTATGAAGAAGCCACTTCCCATTTTGCAGCTGTTCACAAAGTGTTTGGTGCAAGTAATGTTTCGAAGCTTCTCTTACACCTCCCTGTGCACAATCGAAGCCACGCTGCCATTACTGTTGCTTATGAAGCTCTTGAGCGAATGCGAGATCCCACCTATGGCTGCATTGCTCACATCTTCGCATTGCAGCAAGAGGTTGTTGCAAGCTTGCAAGAGGAGATAGAAATTCTCGGGAGCCAAATAGCCAACTTCGCCACTGCAACCGACACCGTTGCAACGACCGAGAATCCGTTTATAGAGCTCCAAGTCTCGCAGCAGCTGAGTGATTTTGTGATGAACACAGATGATTATCAAAATCATCTATTTTCTCAACTGCCTCACCAAACTTTTGATCATCGTGGCCAAAACGATGCTCAGATGATATCTCCATTGTGTTGCTTAGGGGAAGAAAATGGGTTTTTTGGGTGTAACCCAAATGCTATGGAGAACTTTGCTTCTTATCCATGG MTGFAYSSSSFSSCGACKFLRRKCSDQCVFAPFFSYEEATSHFAAVHKVFGASNVSKLLLHLPVHNRSHAAITVAYEALERMRDPTYGCIAHIFALQQEVVASLQEEIEILGSQIANFATATDTVATTENPFIELQVSQQLSDFVMNTDDYQNHLFSQLPHQTFDHRGQNDAQMISPLCCLGEENGFFGCNPNAMENFASYPW Homology
BLAST of MS017265 vs. NCBI nr
Match: XP_022139192.1 (LOB domain-containing protein 33 [Momordica charantia]) HSP 1 Score: 406.4 bits (1043), Expect = 1.5e-109 Identity = 200/203 (98.52%), Postives = 201/203 (99.01%), Query Frame = 0
BLAST of MS017265 vs. NCBI nr
Match: XP_023542245.1 (LOB domain-containing protein 33-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 303.1 bits (775), Expect = 1.8e-78 Identity = 160/202 (79.21%), Postives = 173/202 (85.64%), Query Frame = 0
BLAST of MS017265 vs. NCBI nr
Match: XP_022941701.1 (LOB domain-containing protein 33-like [Cucurbita moschata]) HSP 1 Score: 299.7 bits (766), Expect = 1.9e-77 Identity = 158/202 (78.22%), Postives = 173/202 (85.64%), Query Frame = 0
BLAST of MS017265 vs. NCBI nr
Match: XP_038889414.1 (LOB domain-containing protein 33-like [Benincasa hispida]) HSP 1 Score: 299.3 bits (765), Expect = 2.5e-77 Identity = 160/211 (75.83%), Postives = 175/211 (82.94%), Query Frame = 0
BLAST of MS017265 vs. NCBI nr
Match: XP_022996495.1 (LOB domain-containing protein 33-like [Cucurbita maxima]) HSP 1 Score: 297.4 bits (760), Expect = 9.7e-77 Identity = 153/194 (78.87%), Postives = 169/194 (87.11%), Query Frame = 0
BLAST of MS017265 vs. ExPASy Swiss-Prot
Match: Q9LHS8 (LOB domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=LBD33 PE=2 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 1.4e-41 Identity = 92/151 (60.93%), Postives = 114/151 (75.50%), Query Frame = 0
BLAST of MS017265 vs. ExPASy Swiss-Prot
Match: Q9M2J7 (LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.0e-36 Identity = 79/125 (63.20%), Postives = 97/125 (77.60%), Query Frame = 0
BLAST of MS017265 vs. ExPASy Swiss-Prot
Match: O22131 (LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 SV=2) HSP 1 Score: 145.6 bits (366), Expect = 6.2e-34 Identity = 68/104 (65.38%), Postives = 85/104 (81.73%), Query Frame = 0
BLAST of MS017265 vs. ExPASy Swiss-Prot
Match: Q5UG13 (LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL1 PE=1 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 2.3e-33 Identity = 74/133 (55.64%), Postives = 95/133 (71.43%), Query Frame = 0
BLAST of MS017265 vs. ExPASy Swiss-Prot
Match: Q9SLB7 (LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 6.8e-33 Identity = 67/120 (55.83%), Postives = 92/120 (76.67%), Query Frame = 0
BLAST of MS017265 vs. ExPASy TrEMBL
Match: A0A6J1CDB4 (LOB domain-containing protein 33 OS=Momordica charantia OX=3673 GN=LOC111010160 PE=3 SV=1) HSP 1 Score: 406.4 bits (1043), Expect = 7.1e-110 Identity = 200/203 (98.52%), Postives = 201/203 (99.01%), Query Frame = 0
BLAST of MS017265 vs. ExPASy TrEMBL
Match: A0A6J1FLU4 (LOB domain-containing protein 33-like OS=Cucurbita moschata OX=3662 GN=LOC111446983 PE=3 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 9.4e-78 Identity = 158/202 (78.22%), Postives = 173/202 (85.64%), Query Frame = 0
BLAST of MS017265 vs. ExPASy TrEMBL
Match: A0A6J1K6X9 (LOB domain-containing protein 33-like OS=Cucurbita maxima OX=3661 GN=LOC111491723 PE=3 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 4.7e-77 Identity = 153/194 (78.87%), Postives = 169/194 (87.11%), Query Frame = 0
BLAST of MS017265 vs. ExPASy TrEMBL
Match: A0A1S3CGM1 (LOB domain-containing protein 33-like OS=Cucumis melo OX=3656 GN=LOC103500235 PE=3 SV=1) HSP 1 Score: 282.0 bits (720), Expect = 2.0e-72 Identity = 157/220 (71.36%), Postives = 173/220 (78.64%), Query Frame = 0
BLAST of MS017265 vs. ExPASy TrEMBL
Match: A0A0A0KNX8 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G182740 PE=3 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 2.5e-70 Identity = 154/220 (70.00%), Postives = 173/220 (78.64%), Query Frame = 0
BLAST of MS017265 vs. TAIR 10
Match: AT5G06080.1 (LOB domain-containing protein 33 ) HSP 1 Score: 171.0 bits (432), Expect = 9.7e-43 Identity = 92/151 (60.93%), Postives = 114/151 (75.50%), Query Frame = 0
BLAST of MS017265 vs. TAIR 10
Match: AT3G58190.1 (lateral organ boundaries-domain 29 ) HSP 1 Score: 154.8 bits (390), Expect = 7.2e-38 Identity = 79/125 (63.20%), Postives = 97/125 (77.60%), Query Frame = 0
BLAST of MS017265 vs. TAIR 10
Match: AT2G45420.1 (LOB domain-containing protein 18 ) HSP 1 Score: 145.6 bits (366), Expect = 4.4e-35 Identity = 68/104 (65.38%), Postives = 85/104 (81.73%), Query Frame = 0
BLAST of MS017265 vs. TAIR 10
Match: AT2G42430.1 (lateral organ boundaries-domain 16 ) HSP 1 Score: 142.1 bits (357), Expect = 4.8e-34 Identity = 67/120 (55.83%), Postives = 92/120 (76.67%), Query Frame = 0
BLAST of MS017265 vs. TAIR 10
Match: AT2G42440.1 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 138.3 bits (347), Expect = 7.0e-33 Identity = 70/124 (56.45%), Postives = 90/124 (72.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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