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MS017263 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTCAGGTCTTCGAAGGTTACGAGCGCCAATATTGTGAACTCTCCGCGAATGTTTCTCGTAAATGCAACTCTTTCTCCGCCTCCGATTCAGGTACTGTCCCATGATTTTCTTCTCAATTTTAAATTTCTGTAAGGGTTACCCGTGGCTTGCTTTACCTGCTTCAACGCAGTTCCAACCCCAATTTTTTTAATTTGGTGGCTGATTTGAGGGAAAAGAGATGGAGAGTGAAAATTTGGAAGTTACGTTTTGTTCTGTTGCGAGAATTTTGAAGAGGGTTCTTAGAATTGTGGTTGGAGATCTCGAATTGGGATTTGGATGAGCAGATGGTGATATTTCTAATCGGATCGAATTATGCATATGGGGAATTTTAATATTTCTTGCTAATGTTTCGAGTTGTTTATTATGAGGTTGCAAGCAAGATGACTTAAATGTTCAAGATTGGATTCTATGAAAATAATGTTGAATTTGTCATCGTTTGAAATGTGAACAATTGGAATGGGTACTAATTTTAGCTCAACGTGAATTGCAGAGCAGAAACAGCAACGGGTTTCTGAAATCAAAGCGAGTTTAGATGAGGCTGATGTTTTGGTACGTTTGAAGAGCCTTGTTTTGGTTTTAATCTTATCACTTTTTTCTTTTCATTTTAGGTTGGTTAGATTCTTGATGATATACATAAAAATGTAATATCTTATTGATTTCTAGATTCGGAAAATGGACCTTGAGGCCAGAAGTCTGCAGCCAAGTGTAAAGGCTATGCTACTTGCTAAGCTACGGGAGTACAAATCTGATCTTGGCAAACTGAAAAAGGAATTTAAGAGGTTGACATCACCTAATGCTGATCAGGCTGCCCGTGAAGAGCTGTTGGAGTCTGGAATGGCAGATACTCATTTGGTATATCTTCATTATTCAATTTTTACAGTTTCCTTTAAATTTAAGCATCACAAAGTATTTCTCCTTAATGGATCCTGAGTTGATTAAGTGTGTGTCACTTACCTTTTAAAGTGCTCATTGATTATTAGAAGTACTTTCTTAAAAATTAGCAGTATTCGGTTAAAATTTTAAATGAGTACTTTTGACCAAAGTAGTTTTAGAAATTCTAAAAATAGATTAAAAAAAGTATTTTACTTTTAGATGAAACATTGAACTGCACAGTGTTTCACTTAAAAAAACTTTTTTTTTTTCAAAAGGAATGTCAAACACACGCGAAGGTGGAAATCAAATTGACGGAAGAGACTAGTGGTTGAAATTTTTTTATCTTAGTGCATCTATACGAAATGTTCAAAGATTTTGGTTATTTTGATAGTGTATATTAGGATTGCTATTAGGATTGCTATTGATATTGTTAGGGTATTAAGGATATATTGGTATTTGTGTTAGGAGGTTTAGTTATAAATAGAGGGAGGAGGAAAGGATGAAGGTAAGCAATTAGGGAGTATGGTTTAGGCTTGAGTAAGAATACTCAAGAGAGGGGAGGGTCCAAGTACCTCGAATTACTTGGTAGTTATTATAGTTTTTTTATCTTTTAAGCAACTTTGGTTAAGTTAAGACACTAGTAATTTTCCACATCATACATTCAAATCTCCACCCCATCTGTTTGAATTGTAATACTAAAAGAGAAAGTGACGTATATCATTAAGTTTTTTTTTTTTTTTAGTACAACATGTTGGGAAGGGGATTCGAACTCACAACCTCTTGGTTGGAGGTATATGTCAATTACCGTTGAGCTATGCTCGTTTTGGCACGTATATCATTAAGTTCTTCAAACAAAGTGTTACCGTATTTTGTAGGTAATTCACCTTTTTTTTGTTTGGATAAGAAACTTTGTACCCTTAGGCTGTTTTTTGTGTTTCTATGCTTTTGGTAATTCACCATTTTGATATGAACATCTTATTCAGTCTTTGTTTTTCTTCAATCACTCTTATGACTGAACTGATGATGGTTTCTTAGCTTTGTAGATAGTCTTATCTTTTCCCATTCAATTTATTTTTCAATGGTTGTTGGCTTTTTCATCTCAATAACTAGCGCAATATTCTGTTTCTTGAGTTATTATTAATTGGAGTTGAGGCGCTGGATGCCTTCTGTTATACGACTTCATGTTGGATTCTCATCATTGGATCAATCCCATATGTATTGTATAGCACTAGTAGCATTGAACCGAATTTATAAGTGTAAGTATAGTGTAGGTATTTGCCATTTGATAATTTTGAATAATTTGTCATTTGATATAGTGTAGGTATTTGTCTCGCCTAGGTGTAATTGACCATTTTTGCTAACTTAACTGACATTCTTACAGGCTTCAGCTGATCAAAGAGAGAGGATGACAATGTCTATAGAGAGAATGAATCAGTCAAGTGAAAGAATTGCAGAGAGTAGAAGAACCATGTTGGAGACCGAAGATCTCGGTGTCTCAATCCTTGAGGACTTGCATCAACAGCGAGAAACTCTATTACACTCCCATAAGAGAGTAAGTATTTTATTGATCTTATGTTCTAGCTGACTGTGACATCTCAGATATTTCCATGAATTTTTCATATGTCCATGACTTTATAAGTTCAACGTGGATGTAAGGAATGAACTGATATTTCCATTATACCATGAACAAAGTATGGAAAAGTTCAACAAAATATCAGTAACACAAACATACTAATCCATCGATATGGACACTTTATTGATATTTTGATTGAAATTTTCATGAAACTAAGATGTTAACATTTTTCGTCAACATCAATATTTAGAATTCTTGCTAGTGAGTAAGGTCTTAGTCACACACACCATTACACGAGTAAAATTTTATTTGATGCCGTTAGCATCCTTCAACTCATTCCATTCCTAACCCATTTTTCTCCCAATTGTCCTTGGGACAATGGTTAACAACGTGCTTTATTTTACAGCTTCATGGGGTAGATGATGCCATTGATAAGAGTAAAAGGGTTTTAAACTCAATGTCTCGAAGAATCAGTCGAAATAAATGGATAGTCGGGTCGGTAATTGGTGTTCTGGTACTCGTAATTATCCTTATACTATATCTTAAGCTTTCACAT ATGAGTCAGGTCTTCGAAGGTTACGAGCGCCAATATTGTGAACTCTCCGCGAATGTTTCTCGTAAATGCAACTCTTTCTCCGCCTCCGATTCAGGTACTCAGAAACAGCAACGGGTTTCTGAAATCAAAGCGAGTTTAGATGAGGCTGATGTTTTGATTCGGAAAATGGACCTTGAGGCCAGAAGTCTGCAGCCAAGTGTAAAGGCTATGCTACTTGCTAAGCTACGGGAGTACAAATCTGATCTTGGCAAACTGAAAAAGGAATTTAAGAGGTTGACATCACCTAATGCTGATCAGGCTGCCCGTGAAGAGCTGTTGGAGTCTGGAATGGCAGATACTCATTTGGCTTCAGCTGATCAAAGAGAGAGGATGACAATGTCTATAGAGAGAATGAATCAGTCAAGTGAAAGAATTGCAGAGAGTAGAAGAACCATGTTGGAGACCGAAGATCTCGGTGTCTCAATCCTTGAGGACTTGCATCAACAGCGAGAAACTCTATTACACTCCCATAAGAGACTTCATGGGGTAGATGATGCCATTGATAAGAGTAAAAGGGTTTTAAACTCAATGTCTCGAAGAATCAGTCGAAATAAATGGATAGTCGGGTCGGTAATTGGTGTTCTGGTACTCGTAATTATCCTTATACTATATCTTAAGCTTTCACAT ATGAGTCAGGTCTTCGAAGGTTACGAGCGCCAATATTGTGAACTCTCCGCGAATGTTTCTCGTAAATGCAACTCTTTCTCCGCCTCCGATTCAGGTACTCAGAAACAGCAACGGGTTTCTGAAATCAAAGCGAGTTTAGATGAGGCTGATGTTTTGATTCGGAAAATGGACCTTGAGGCCAGAAGTCTGCAGCCAAGTGTAAAGGCTATGCTACTTGCTAAGCTACGGGAGTACAAATCTGATCTTGGCAAACTGAAAAAGGAATTTAAGAGGTTGACATCACCTAATGCTGATCAGGCTGCCCGTGAAGAGCTGTTGGAGTCTGGAATGGCAGATACTCATTTGGCTTCAGCTGATCAAAGAGAGAGGATGACAATGTCTATAGAGAGAATGAATCAGTCAAGTGAAAGAATTGCAGAGAGTAGAAGAACCATGTTGGAGACCGAAGATCTCGGTGTCTCAATCCTTGAGGACTTGCATCAACAGCGAGAAACTCTATTACACTCCCATAAGAGACTTCATGGGGTAGATGATGCCATTGATAAGAGTAAAAGGGTTTTAAACTCAATGTCTCGAAGAATCAGTCGAAATAAATGGATAGTCGGGTCGGTAATTGGTGTTCTGGTACTCGTAATTATCCTTATACTATATCTTAAGCTTTCACAT MSQVFEGYERQYCELSANVSRKCNSFSASDSGTQKQQRVSEIKASLDEADVLIRKMDLEARSLQPSVKAMLLAKLREYKSDLGKLKKEFKRLTSPNADQAAREELLESGMADTHLASADQRERMTMSIERMNQSSERIAESRRTMLETEDLGVSILEDLHQQRETLLHSHKRLHGVDDAIDKSKRVLNSMSRRISRNKWIVGSVIGVLVLVIILILYLKLSH Homology
BLAST of MS017263 vs. NCBI nr
Match: XP_022138916.1 (vesicle transport v-SNARE 12-like [Momordica charantia]) HSP 1 Score: 396.0 bits (1016), Expect = 2.2e-106 Identity = 220/222 (99.10%), Postives = 220/222 (99.10%), Query Frame = 0
BLAST of MS017263 vs. NCBI nr
Match: XP_038889496.1 (vesicle transport v-SNARE 12-like [Benincasa hispida]) HSP 1 Score: 359.4 bits (921), Expect = 2.3e-95 Identity = 201/220 (91.36%), Postives = 209/220 (95.00%), Query Frame = 0
BLAST of MS017263 vs. NCBI nr
Match: XP_022996461.1 (vesicle transport v-SNARE 12-like [Cucurbita maxima]) HSP 1 Score: 355.9 bits (912), Expect = 2.5e-94 Identity = 198/220 (90.00%), Postives = 210/220 (95.45%), Query Frame = 0
BLAST of MS017263 vs. NCBI nr
Match: XP_008461698.1 (PREDICTED: vesicle transport v-SNARE 12-like [Cucumis melo]) HSP 1 Score: 355.9 bits (912), Expect = 2.5e-94 Identity = 198/220 (90.00%), Postives = 208/220 (94.55%), Query Frame = 0
BLAST of MS017263 vs. NCBI nr
Match: XP_023528822.1 (vesicle transport v-SNARE 12-like [Cucurbita pepo subsp. pepo] >KAG7030705.1 Vesicle transport v-SNARE 12 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 353.6 bits (906), Expect = 1.2e-93 Identity = 197/220 (89.55%), Postives = 209/220 (95.00%), Query Frame = 0
BLAST of MS017263 vs. ExPASy Swiss-Prot
Match: Q9SEL5 (Vesicle transport v-SNARE 12 OS=Arabidopsis thaliana OX=3702 GN=VTI12 PE=1 SV=3) HSP 1 Score: 291.2 bits (744), Expect = 9.9e-78 Identity = 153/222 (68.92%), Postives = 191/222 (86.04%), Query Frame = 0
BLAST of MS017263 vs. ExPASy Swiss-Prot
Match: Q9LVP9 (Vesicle transport v-SNARE 13 OS=Arabidopsis thaliana OX=3702 GN=VTI13 PE=2 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 3.0e-66 Identity = 135/221 (61.09%), Postives = 179/221 (81.00%), Query Frame = 0
BLAST of MS017263 vs. ExPASy Swiss-Prot
Match: Q9SEL6 (Vesicle transport v-SNARE 11 OS=Arabidopsis thaliana OX=3702 GN=VTI11 PE=1 SV=2) HSP 1 Score: 250.0 bits (637), Expect = 2.5e-65 Identity = 131/221 (59.28%), Postives = 180/221 (81.45%), Query Frame = 0
BLAST of MS017263 vs. ExPASy Swiss-Prot
Match: Q96AJ9 (Vesicle transport through interaction with t-SNAREs homolog 1A OS=Homo sapiens OX=9606 GN=VTI1A PE=1 SV=2) HSP 1 Score: 105.1 bits (261), Expect = 1.0e-21 Identity = 73/215 (33.95%), Postives = 123/215 (57.21%), Query Frame = 0
BLAST of MS017263 vs. ExPASy Swiss-Prot
Match: O89116 (Vesicle transport through interaction with t-SNAREs homolog 1A OS=Mus musculus OX=10090 GN=Vti1a PE=1 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.0e-21 Identity = 73/214 (34.11%), Postives = 121/214 (56.54%), Query Frame = 0
BLAST of MS017263 vs. ExPASy TrEMBL
Match: A0A6J1CB35 (vesicle transport v-SNARE 12-like OS=Momordica charantia OX=3673 GN=LOC111009979 PE=3 SV=1) HSP 1 Score: 396.0 bits (1016), Expect = 1.1e-106 Identity = 220/222 (99.10%), Postives = 220/222 (99.10%), Query Frame = 0
BLAST of MS017263 vs. ExPASy TrEMBL
Match: A0A6J1K4T5 (vesicle transport v-SNARE 12-like OS=Cucurbita maxima OX=3661 GN=LOC111491702 PE=3 SV=1) HSP 1 Score: 355.9 bits (912), Expect = 1.2e-94 Identity = 198/220 (90.00%), Postives = 210/220 (95.45%), Query Frame = 0
BLAST of MS017263 vs. ExPASy TrEMBL
Match: A0A1S3CFT2 (vesicle transport v-SNARE 12-like OS=Cucumis melo OX=3656 GN=LOC103500237 PE=3 SV=1) HSP 1 Score: 355.9 bits (912), Expect = 1.2e-94 Identity = 198/220 (90.00%), Postives = 208/220 (94.55%), Query Frame = 0
BLAST of MS017263 vs. ExPASy TrEMBL
Match: A0A6J1FWM6 (vesicle transport v-SNARE 12-like OS=Cucurbita moschata OX=3662 GN=LOC111448046 PE=3 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 1.3e-93 Identity = 196/220 (89.09%), Postives = 209/220 (95.00%), Query Frame = 0
BLAST of MS017263 vs. ExPASy TrEMBL
Match: A0A0A0KLX2 (PH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G182770 PE=3 SV=1) HSP 1 Score: 350.5 bits (898), Expect = 5.1e-93 Identity = 195/220 (88.64%), Postives = 206/220 (93.64%), Query Frame = 0
BLAST of MS017263 vs. TAIR 10
Match: AT1G26670.1 (Vesicle transport v-SNARE family protein ) HSP 1 Score: 291.2 bits (744), Expect = 7.1e-79 Identity = 153/222 (68.92%), Postives = 191/222 (86.04%), Query Frame = 0
BLAST of MS017263 vs. TAIR 10
Match: AT5G39510.1 (Vesicle transport v-SNARE family protein ) HSP 1 Score: 250.0 bits (637), Expect = 1.8e-66 Identity = 131/221 (59.28%), Postives = 180/221 (81.45%), Query Frame = 0
BLAST of MS017263 vs. TAIR 10
Match: AT3G29100.1 (vesicle transport V-snare 13 ) HSP 1 Score: 196.4 bits (498), Expect = 2.4e-50 Identity = 103/169 (60.95%), Postives = 138/169 (81.66%), Query Frame = 0
BLAST of MS017263 vs. TAIR 10
Match: AT3G29100.2 (vesicle transport V-snare 13 ) HSP 1 Score: 193.0 bits (489), Expect = 2.6e-49 Identity = 102/166 (61.45%), Postives = 135/166 (81.33%), Query Frame = 0
BLAST of MS017263 vs. TAIR 10
Match: AT5G39630.1 (Vesicle transport v-SNARE family protein ) HSP 1 Score: 142.5 bits (358), Expect = 4.1e-34 Identity = 85/190 (44.74%), Postives = 129/190 (67.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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