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MS017250 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATTGTGGGATCCTCACAGATAGAAAAAGATTGCAGTCGATTTGATAATGATCGAGTGACATTTCCTCTTCTGTCCAAACTCAGGAATCCTTTGGATATGATACAAAATGGATCTTGTTCTATCGTTGATTAGAGATTTTTCTGTGAATAATACGAATTGGAGTTTGAAGAAGGGAATGGAGAAGGAGTCCTCGACCCACAACAGATAGAGGAAGATTTATTCAATAACAATAAATTGGGTTCTATTTGATTGTATCAAAAGACCCAATGAATTGAGATTTTCCTATTGGGCAAAGTCACTGTGGGACAAGCAGATCATTTATGATGAAGAG ATTGTGGGATCCTCACAGATAGAAAAAGATTGCAGTCGATTTGATAATGATCGAGTGACATTTCCTCTTCTGTCCAAACTCAGGAATCCTTTGGATATGATACAAAATGGATCTTGTTCTATCGTTGATGATTTTTCTGTGAATTACGAATTGGAGTTTGAAGAAGGGAATGGAGAAGGAGTCCTCGACCCACAACAGATAGAGGAAGATTTATTCAATATAAATTGGGTTCTATTTGATTGTATCAAAAGACCCAATGAATTGAGATTTTCCTATTGGGCAAAGTCACTGTGGGACAAGCAGATCATTTATGATGAAGAG ATTGTGGGATCCTCACAGATAGAAAAAGATTGCAGTCGATTTGATAATGATCGAGTGACATTTCCTCTTCTGTCCAAACTCAGGAATCCTTTGGATATGATACAAAATGGATCTTGTTCTATCGTTGATGATTTTTCTGTGAATTACGAATTGGAGTTTGAAGAAGGGAATGGAGAAGGAGTCCTCGACCCACAACAGATAGAGGAAGATTTATTCAATATAAATTGGGTTCTATTTGATTGTATCAAAAGACCCAATGAATTGAGATTTTCCTATTGGGCAAAGTCACTGTGGGACAAGCAGATCATTTATGATGAAGAG IVGSSQIEKDCSRFDNDRVTFPLLSKLRNPLDMIQNGSCSIVDDFSVNYELEFEEGNGEGVLDPQQIEEDLFNINWVLFDCIKRPNELRFSYWAKSLWDKQIIYDEE Homology
BLAST of MS017250 vs. NCBI nr
Match: YP_009753300.1 (Ycf2 protein [Nothoalsomitra suberosa] >YP_009753318.1 Ycf2 protein [Nothoalsomitra suberosa] >QIT06372.1 Ycf2 protein [Nothoalsomitra suberosa] >QIT06390.1 Ycf2 protein [Nothoalsomitra suberosa]) HSP 1 Score: 154.1 bits (388), Expect = 7.0e-34 Identity = 81/119 (68.07%), Postives = 88/119 (73.95%), Query Frame = 0
BLAST of MS017250 vs. NCBI nr
Match: QGR23666.1 (Ycf2 [Sonneratia apetala] >QGR23683.1 Ycf2 [Sonneratia apetala]) HSP 1 Score: 151.4 bits (381), Expect = 4.5e-33 Identity = 80/119 (67.23%), Postives = 87/119 (73.11%), Query Frame = 0
BLAST of MS017250 vs. NCBI nr
Match: YP_010131137.1 (hypothetical protein RF2 [Benincasa hispida] >YP_010131154.1 hypothetical protein RF2 [Benincasa hispida] >QPZ75785.1 hypothetical protein RF2 [Benincasa hispida] >QPZ75802.1 hypothetical protein RF2 [Benincasa hispida] >QSQ72354.1 Ycf2 protein [Benincasa hispida] >QSQ72372.1 Ycf2 protein [Benincasa hispida]) HSP 1 Score: 151.4 bits (381), Expect = 4.5e-33 Identity = 80/119 (67.23%), Postives = 87/119 (73.11%), Query Frame = 0
BLAST of MS017250 vs. NCBI nr
Match: YP_009752033.1 (Ycf2 protein [Cionosicys macranthus] >YP_009752051.1 Ycf2 protein [Cionosicys macranthus] >QIT05274.1 Ycf2 protein [Cionosicys macranthus] >QIT05292.1 Ycf2 protein [Cionosicys macranthus]) HSP 1 Score: 151.4 bits (381), Expect = 4.5e-33 Identity = 80/119 (67.23%), Postives = 87/119 (73.11%), Query Frame = 0
BLAST of MS017250 vs. NCBI nr
Match: YP_009752286.1 (Ycf2 protein [Trichosanthes baviensis] >YP_009752303.1 Ycf2 protein [Trichosanthes baviensis] >QIT04260.1 Ycf2 protein [Trichosanthes baviensis] >QIT04277.1 Ycf2 protein [Trichosanthes baviensis]) HSP 1 Score: 151.4 bits (381), Expect = 4.5e-33 Identity = 80/119 (67.23%), Postives = 87/119 (73.11%), Query Frame = 0
BLAST of MS017250 vs. ExPASy Swiss-Prot
Match: A0A379 (Protein Ycf2 OS=Coffea arabica OX=13443 GN=ycf2-A PE=3 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 8.5e-35 Identity = 75/119 (63.03%), Postives = 86/119 (72.27%), Query Frame = 0
BLAST of MS017250 vs. ExPASy Swiss-Prot
Match: B1A978 (Protein Ycf2 OS=Carica papaya OX=3649 GN=ycf2-A PE=3 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 1.5e-34 Identity = 78/119 (65.55%), Postives = 87/119 (73.11%), Query Frame = 0
BLAST of MS017250 vs. ExPASy Swiss-Prot
Match: Q06GT4 (Protein Ycf2 OS=Drimys granadensis OX=224735 GN=ycf2-A PE=3 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 2.5e-34 Identity = 77/119 (64.71%), Postives = 86/119 (72.27%), Query Frame = 0
BLAST of MS017250 vs. ExPASy Swiss-Prot
Match: Q0ZIV6 (Protein Ycf2 OS=Vitis vinifera OX=29760 GN=ycf2-A PE=3 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 7.2e-34 Identity = 77/119 (64.71%), Postives = 85/119 (71.43%), Query Frame = 0
BLAST of MS017250 vs. ExPASy Swiss-Prot
Match: Q49KT6 (Protein Ycf2 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ycf2-A PE=3 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 1.2e-33 Identity = 77/119 (64.71%), Postives = 85/119 (71.43%), Query Frame = 0
BLAST of MS017250 vs. ExPASy TrEMBL
Match: A0A6H0EVL1 (Protein Ycf2 OS=Nothoalsomitra suberosa OX=386201 GN=ycf2 PE=3 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 3.4e-34 Identity = 81/119 (68.07%), Postives = 88/119 (73.95%), Query Frame = 0
BLAST of MS017250 vs. ExPASy TrEMBL
Match: A0A1W5HW99 (Protein Ycf2 OS=Lagerstroemia subcostata OX=1418012 GN=ycf2 PE=3 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 2.2e-33 Identity = 80/119 (67.23%), Postives = 87/119 (73.11%), Query Frame = 0
BLAST of MS017250 vs. ExPASy TrEMBL
Match: A0A4P8VRX4 (Protein Ycf2 OS=Lagerstroemia calyculata OX=2576875 GN=ycf2 PE=3 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 2.2e-33 Identity = 80/119 (67.23%), Postives = 87/119 (73.11%), Query Frame = 0
BLAST of MS017250 vs. ExPASy TrEMBL
Match: A0A7L9CWQ4 (Protein Ycf2 OS=Lagerstroemia balansae OX=2778913 GN=ycf2 PE=3 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 2.2e-33 Identity = 80/119 (67.23%), Postives = 87/119 (73.11%), Query Frame = 0
BLAST of MS017250 vs. ExPASy TrEMBL
Match: A0A343F2F1 (Protein Ycf2 OS=Citrullus colocynthis OX=252529 GN=ycf2 PE=3 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 2.2e-33 Identity = 80/119 (67.23%), Postives = 87/119 (73.11%), Query Frame = 0
BLAST of MS017250 vs. TAIR 10
Match: ATCG00860.1 (Chloroplast Ycf2;ATPase, AAA type, core ) HSP 1 Score: 134.4 bits (337), Expect = 5.3e-32 Identity = 74/119 (62.18%), Postives = 84/119 (70.59%), Query Frame = 0
BLAST of MS017250 vs. TAIR 10
Match: ATCG01280.1 (Chloroplast Ycf2;ATPase, AAA type, core ) HSP 1 Score: 134.4 bits (337), Expect = 5.3e-32 Identity = 74/119 (62.18%), Postives = 84/119 (70.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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