Homology
BLAST of MS017245 vs. NCBI nr
Match:
XP_022139301.1 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Momordica charantia] >XP_022139302.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Momordica charantia])
HSP 1 Score: 511.1 bits (1315), Expect = 5.3e-141
Identity = 251/252 (99.60%), Postives = 251/252 (99.60%), Query Frame = 0
Query: 1 DCICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIVKKVGKEAHHLWKKRDSAGSGQK 60
DCICNFNKLTFRAASFKCSHNQAVQPFTSSPT ERRIVKKVGKEAHHLWKKRDSAGSGQK
Sbjct: 19 DCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVGKEAHHLWKKRDSAGSGQK 78
Query: 61 ALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWM 120
ALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWM
Sbjct: 79 ALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWM 138
Query: 121 LSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDL 180
LSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDL
Sbjct: 139 LSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDL 198
Query: 181 QDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERV 240
QDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERV
Sbjct: 199 QDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERV 258
Query: 241 RVKRDGWDEDDE 253
RVKRDGWDEDDE
Sbjct: 259 RVKRDGWDEDDE 270
BLAST of MS017245 vs. NCBI nr
Match:
XP_022139303.1 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X2 [Momordica charantia])
HSP 1 Score: 500.7 bits (1288), Expect = 7.1e-138
Identity = 248/252 (98.41%), Postives = 248/252 (98.41%), Query Frame = 0
Query: 1 DCICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIVKKVGKEAHHLWKKRDSAGSGQK 60
DCICNFNKLTFRAASFKCSHNQAVQPFTSSPT ERRIVKKVGKEAHHLWKKRDSAGSGQK
Sbjct: 19 DCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVGKEAHHLWKKRDSAGSGQK 78
Query: 61 ALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWM 120
ALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWM
Sbjct: 79 ALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWM 138
Query: 121 LSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDL 180
LSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDL
Sbjct: 139 LSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDL 198
Query: 181 QDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERV 240
QDK IFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERV
Sbjct: 199 QDK---IFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERV 258
Query: 241 RVKRDGWDEDDE 253
RVKRDGWDEDDE
Sbjct: 259 RVKRDGWDEDDE 267
BLAST of MS017245 vs. NCBI nr
Match:
XP_023541595.1 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023541609.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 458.4 bits (1178), Expect = 4.1e-125
Identity = 226/252 (89.68%), Postives = 237/252 (94.05%), Query Frame = 0
Query: 2 CICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIV-KKVGKEAHHLWKKRDSAGSGQK 61
CI N+NKL FRAAS KC H QA Q TSS T ERRIV KKVGKEAHHLWKKRDSAGSGQK
Sbjct: 20 CIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQK 79
Query: 62 ALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWM 121
ALNLVRIVSQCPNEKEAVYG LNKWIAWETEFPLIAA+KALRILRKRSQWKRVIQVAKWM
Sbjct: 80 ALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWM 139
Query: 122 LSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDL 181
LSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILH HTRSISK+LFSRMISLYDHHDL
Sbjct: 140 LSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDL 199
Query: 182 QDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERV 241
QDK+IEIFADMEELGV+PDEDTVRRVA AF+KLGQEEN K+V+KRYGCKWKYIHFKGERV
Sbjct: 200 QDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKLVYKRYGCKWKYIHFKGERV 259
Query: 242 RVKRDGWDEDDE 253
RV+RDGWDEDD+
Sbjct: 260 RVRRDGWDEDDK 271
BLAST of MS017245 vs. NCBI nr
Match:
XP_008464896.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Cucumis melo] >KAA0051555.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 458.0 bits (1177), Expect = 5.3e-125
Identity = 223/252 (88.49%), Postives = 235/252 (93.25%), Query Frame = 0
Query: 1 DCICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIVKKVGKEAHHLWKKRDSAGSGQK 60
DCI NK FR AS C HNQA QP TS T ERR+VKKVGKEAHHLWKKRDSAGSGQK
Sbjct: 19 DCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVGKEAHHLWKKRDSAGSGQK 78
Query: 61 ALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWM 120
ALNLVRIVSQCPNEKEAVYG LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWM
Sbjct: 79 ALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWM 138
Query: 121 LSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDL 180
LSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILHTHTRSISK++FSRMISLY+HHDL
Sbjct: 139 LSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDL 198
Query: 181 QDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERV 240
QDK+IEIFADMEELGVKPDEDTVRR+ RAFQKLGQEENRKMV+KRY C+WKYIHFKGERV
Sbjct: 199 QDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWKYIHFKGERV 258
Query: 241 RVKRDGWDEDDE 253
RV++DGWDEDD+
Sbjct: 259 RVRKDGWDEDDQ 270
BLAST of MS017245 vs. NCBI nr
Match:
XP_022942519.1 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita moschata] >XP_022942520.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita moschata])
HSP 1 Score: 458.0 bits (1177), Expect = 5.3e-125
Identity = 226/252 (89.68%), Postives = 236/252 (93.65%), Query Frame = 0
Query: 2 CICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIV-KKVGKEAHHLWKKRDSAGSGQK 61
CI N+NKL FRAAS KC H QA Q T S T ERRIV KKVGKEAHHLWKKRDSAGSGQK
Sbjct: 20 CIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQK 79
Query: 62 ALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWM 121
ALNLVRIVSQCPNEKEAVYG LNKWIAWETEFPLIAA+KALRILRKRSQWKRVIQVAKWM
Sbjct: 80 ALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWM 139
Query: 122 LSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDL 181
LSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILH HTRSISK+LFSRMISLYDHHDL
Sbjct: 140 LSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDL 199
Query: 182 QDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERV 241
QDK+IEIFADMEELGV+PDEDTVRRVA AF+KLGQEEN KMV+KRYGCKWKYIHFKGERV
Sbjct: 200 QDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGERV 259
Query: 242 RVKRDGWDEDDE 253
RV+RDGWDEDD+
Sbjct: 260 RVRRDGWDEDDK 271
BLAST of MS017245 vs. ExPASy Swiss-Prot
Match:
Q2V3H0 (Pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g18975 PE=2 SV=2)
HSP 1 Score: 341.3 bits (874), Expect = 9.5e-93
Identity = 166/213 (77.93%), Postives = 190/213 (89.20%), Query Frame = 0
Query: 32 TTERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETE 91
T + +KKVGK+ HHLWKK DSAGSGQKALNLVR++S PNEKEAVYGALNKW+AWE E
Sbjct: 69 TVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVE 128
Query: 92 FPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESL 151
FP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESL
Sbjct: 129 FPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESL 188
Query: 152 WNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQ 211
WNMILHTHTRSI ++LF+RMI+LY HHDL DKVIE+FADMEEL V PDED+ RRVARAF+
Sbjct: 189 WNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFR 248
Query: 212 KLGQEENRKMVHKRYGCKWKYIHFKGERVRVKR 245
+L QEENRK++ +RY ++KYI+F GERVRVKR
Sbjct: 249 ELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 281
BLAST of MS017245 vs. ExPASy Swiss-Prot
Match:
Q8LG95 (Pentatricopeptide repeat-containing protein At4g21190 OS=Arabidopsis thaliana OX=3702 GN=EMB1417 PE=2 SV=1)
HSP 1 Score: 182.6 bits (462), Expect = 5.6e-45
Identity = 95/206 (46.12%), Postives = 129/206 (62.62%), Query Frame = 0
Query: 48 LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKR 107
+WK R G+ KA ++ + N KE VYGAL+ +IAWE EFPL+ KAL IL
Sbjct: 45 VWKTRKRIGTISKAAKMIACIKGLSNVKEEVYGALDSFIAWELEFPLVIVKKALVILEDE 104
Query: 108 SQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQL 167
+WK++IQV KWMLSKGQG TMGTY SLL A D R+DEAE LWN + H ++
Sbjct: 105 KEWKKIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKF 164
Query: 168 FSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRY- 227
F++MIS+Y D+ K+ E+FADMEELGVKP+ V V + F KL ++ + + K+Y
Sbjct: 165 FNKMISIYYKRDMHQKLFEVFADMEELGVKPNVAIVSMVGKVFVKLEMKDKYEKLMKKYP 224
Query: 228 GCKWKYIHFKGERVRVKRDGWDEDDE 253
+W++ + KG RV+VK +E E
Sbjct: 225 PPQWEFRYIKGRRVKVKAKQLNELSE 250
BLAST of MS017245 vs. ExPASy TrEMBL
Match:
A0A6J1CC95 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010251 PE=4 SV=1)
HSP 1 Score: 511.1 bits (1315), Expect = 2.6e-141
Identity = 251/252 (99.60%), Postives = 251/252 (99.60%), Query Frame = 0
Query: 1 DCICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIVKKVGKEAHHLWKKRDSAGSGQK 60
DCICNFNKLTFRAASFKCSHNQAVQPFTSSPT ERRIVKKVGKEAHHLWKKRDSAGSGQK
Sbjct: 19 DCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVGKEAHHLWKKRDSAGSGQK 78
Query: 61 ALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWM 120
ALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWM
Sbjct: 79 ALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWM 138
Query: 121 LSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDL 180
LSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDL
Sbjct: 139 LSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDL 198
Query: 181 QDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERV 240
QDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERV
Sbjct: 199 QDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERV 258
Query: 241 RVKRDGWDEDDE 253
RVKRDGWDEDDE
Sbjct: 259 RVKRDGWDEDDE 270
BLAST of MS017245 vs. ExPASy TrEMBL
Match:
A0A6J1CFD3 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010251 PE=4 SV=1)
HSP 1 Score: 500.7 bits (1288), Expect = 3.5e-138
Identity = 248/252 (98.41%), Postives = 248/252 (98.41%), Query Frame = 0
Query: 1 DCICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIVKKVGKEAHHLWKKRDSAGSGQK 60
DCICNFNKLTFRAASFKCSHNQAVQPFTSSPT ERRIVKKVGKEAHHLWKKRDSAGSGQK
Sbjct: 19 DCICNFNKLTFRAASFKCSHNQAVQPFTSSPTIERRIVKKVGKEAHHLWKKRDSAGSGQK 78
Query: 61 ALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWM 120
ALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWM
Sbjct: 79 ALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWM 138
Query: 121 LSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDL 180
LSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDL
Sbjct: 139 LSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDL 198
Query: 181 QDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERV 240
QDK IFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERV
Sbjct: 199 QDK---IFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERV 258
Query: 241 RVKRDGWDEDDE 253
RVKRDGWDEDDE
Sbjct: 259 RVKRDGWDEDDE 267
BLAST of MS017245 vs. ExPASy TrEMBL
Match:
A0A6J1FWG3 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111447531 PE=4 SV=1)
HSP 1 Score: 458.0 bits (1177), Expect = 2.6e-125
Identity = 226/252 (89.68%), Postives = 236/252 (93.65%), Query Frame = 0
Query: 2 CICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIV-KKVGKEAHHLWKKRDSAGSGQK 61
CI N+NKL FRAAS KC H QA Q T S T ERRIV KKVGKEAHHLWKKRDSAGSGQK
Sbjct: 20 CIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKVGKEAHHLWKKRDSAGSGQK 79
Query: 62 ALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWM 121
ALNLVRIVSQCPNEKEAVYG LNKWIAWETEFPLIAA+KALRILRKRSQWKRVIQVAKWM
Sbjct: 80 ALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKALRILRKRSQWKRVIQVAKWM 139
Query: 122 LSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDL 181
LSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILH HTRSISK+LFSRMISLYDHHDL
Sbjct: 140 LSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTRSISKRLFSRMISLYDHHDL 199
Query: 182 QDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERV 241
QDK+IEIFADMEELGV+PDEDTVRRVA AF+KLGQEEN KMV+KRYGCKWKYIHFKGERV
Sbjct: 200 QDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKMVYKRYGCKWKYIHFKGERV 259
Query: 242 RVKRDGWDEDDE 253
RV+RDGWDEDD+
Sbjct: 260 RVRRDGWDEDDK 271
BLAST of MS017245 vs. ExPASy TrEMBL
Match:
A0A5A7UD21 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G00890 PE=4 SV=1)
HSP 1 Score: 458.0 bits (1177), Expect = 2.6e-125
Identity = 223/252 (88.49%), Postives = 235/252 (93.25%), Query Frame = 0
Query: 1 DCICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIVKKVGKEAHHLWKKRDSAGSGQK 60
DCI NK FR AS C HNQA QP TS T ERR+VKKVGKEAHHLWKKRDSAGSGQK
Sbjct: 19 DCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVGKEAHHLWKKRDSAGSGQK 78
Query: 61 ALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWM 120
ALNLVRIVSQCPNEKEAVYG LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWM
Sbjct: 79 ALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWM 138
Query: 121 LSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDL 180
LSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILHTHTRSISK++FSRMISLY+HHDL
Sbjct: 139 LSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDL 198
Query: 181 QDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERV 240
QDK+IEIFADMEELGVKPDEDTVRR+ RAFQKLGQEENRKMV+KRY C+WKYIHFKGERV
Sbjct: 199 QDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWKYIHFKGERV 258
Query: 241 RVKRDGWDEDDE 253
RV++DGWDEDD+
Sbjct: 259 RVRKDGWDEDDQ 270
BLAST of MS017245 vs. ExPASy TrEMBL
Match:
A0A1S3CP50 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502655 PE=4 SV=1)
HSP 1 Score: 458.0 bits (1177), Expect = 2.6e-125
Identity = 223/252 (88.49%), Postives = 235/252 (93.25%), Query Frame = 0
Query: 1 DCICNFNKLTFRAASFKCSHNQAVQPFTSSPTTERRIVKKVGKEAHHLWKKRDSAGSGQK 60
DCI NK FR AS C HNQA QP TS T ERR+VKKVGKEAHHLWKKRDSAGSGQK
Sbjct: 19 DCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVGKEAHHLWKKRDSAGSGQK 78
Query: 61 ALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWM 120
ALNLVRIVSQCPNEKEAVYG LNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWM
Sbjct: 79 ALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRSQWKRVIQVAKWM 138
Query: 121 LSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQLFSRMISLYDHHDL 180
LSKGQGATMGTYD+LLLAFDMDKRVDEAESLWNMILHTHTRSISK++FSRMISLY+HHDL
Sbjct: 139 LSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRVFSRMISLYEHHDL 198
Query: 181 QDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRYGCKWKYIHFKGERV 240
QDK+IEIFADMEELGVKPDEDTVRR+ RAFQKLGQEENRKMV+KRY C+WKYIHFKGERV
Sbjct: 199 QDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMVYKRYSCQWKYIHFKGERV 258
Query: 241 RVKRDGWDEDDE 253
RV++DGWDEDD+
Sbjct: 259 RVRKDGWDEDDQ 270
BLAST of MS017245 vs. TAIR 10
Match:
AT4G18975.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 341.3 bits (874), Expect = 6.7e-94
Identity = 166/213 (77.93%), Postives = 190/213 (89.20%), Query Frame = 0
Query: 32 TTERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETE 91
T + +KKVGK+ HHLWKK DSAGSGQKALNLVR++S PNEKEAVYGALNKW+AWE E
Sbjct: 69 TVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVE 128
Query: 92 FPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESL 151
FP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESL
Sbjct: 129 FPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESL 188
Query: 152 WNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQ 211
WNMILHTHTRSI ++LF+RMI+LY HHDL DKVIE+FADMEEL V PDED+ RRVARAF+
Sbjct: 189 WNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFR 248
Query: 212 KLGQEENRKMVHKRYGCKWKYIHFKGERVRVKR 245
+L QEENRK++ +RY ++KYI+F GERVRVKR
Sbjct: 249 ELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 281
BLAST of MS017245 vs. TAIR 10
Match:
AT4G18975.2 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 341.3 bits (874), Expect = 6.7e-94
Identity = 166/213 (77.93%), Postives = 190/213 (89.20%), Query Frame = 0
Query: 32 TTERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETE 91
T + +KKVGK+ HHLWKK DSAGSGQKALNLVR++S PNEKEAVYGALNKW+AWE E
Sbjct: 42 TVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVE 101
Query: 92 FPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESL 151
FP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESL
Sbjct: 102 FPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESL 161
Query: 152 WNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQ 211
WNMILHTHTRSI ++LF+RMI+LY HHDL DKVIE+FADMEEL V PDED+ RRVARAF+
Sbjct: 162 WNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFR 221
Query: 212 KLGQEENRKMVHKRYGCKWKYIHFKGERVRVKR 245
+L QEENRK++ +RY ++KYI+F GERVRVKR
Sbjct: 222 ELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 254
BLAST of MS017245 vs. TAIR 10
Match:
AT4G18975.3 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 341.3 bits (874), Expect = 6.7e-94
Identity = 166/213 (77.93%), Postives = 190/213 (89.20%), Query Frame = 0
Query: 32 TTERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETE 91
T + +KKVGK+ HHLWKK DSAGSGQKALNLVR++S PNEKEAVYGALNKW+AWE E
Sbjct: 69 TVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVE 128
Query: 92 FPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESL 151
FP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESL
Sbjct: 129 FPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESL 188
Query: 152 WNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQ 211
WNMILHTHTRSI ++LF+RMI+LY HHDL DKVIE+FADMEEL V PDED+ RRVARAF+
Sbjct: 189 WNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFR 248
Query: 212 KLGQEENRKMVHKRYGCKWKYIHFKGERVRVKR 245
+L QEENRK++ +RY ++KYI+F GERVRVKR
Sbjct: 249 ELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 281
BLAST of MS017245 vs. TAIR 10
Match:
AT4G18975.4 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 341.3 bits (874), Expect = 6.7e-94
Identity = 166/213 (77.93%), Postives = 190/213 (89.20%), Query Frame = 0
Query: 32 TTERRIVKKVGKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETE 91
T + +KKVGK+ HHLWKK DSAGSGQKALNLVR++S PNEKEAVYGALNKW+AWE E
Sbjct: 69 TVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVE 128
Query: 92 FPLIAAAKALRILRKRSQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESL 151
FP+IAAAKAL+ILRKRSQW RVIQ+AKWMLSKGQGATMGTYD LLLAFDMD+R DEAESL
Sbjct: 129 FPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESL 188
Query: 152 WNMILHTHTRSISKQLFSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQ 211
WNMILHTHTRSI ++LF+RMI+LY HHDL DKVIE+FADMEEL V PDED+ RRVARAF+
Sbjct: 189 WNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFR 248
Query: 212 KLGQEENRKMVHKRYGCKWKYIHFKGERVRVKR 245
+L QEENRK++ +RY ++KYI+F GERVRVKR
Sbjct: 249 ELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 281
BLAST of MS017245 vs. TAIR 10
Match:
AT4G21190.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 182.6 bits (462), Expect = 4.0e-46
Identity = 95/206 (46.12%), Postives = 129/206 (62.62%), Query Frame = 0
Query: 48 LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGALNKWIAWETEFPLIAAAKALRILRKR 107
+WK R G+ KA ++ + N KE VYGAL+ +IAWE EFPL+ KAL IL
Sbjct: 45 VWKTRKRIGTISKAAKMIACIKGLSNVKEEVYGALDSFIAWELEFPLVIVKKALVILEDE 104
Query: 108 SQWKRVIQVAKWMLSKGQGATMGTYDSLLLAFDMDKRVDEAESLWNMILHTHTRSISKQL 167
+WK++IQV KWMLSKGQG TMGTY SLL A D R+DEAE LWN + H ++
Sbjct: 105 KEWKKIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKF 164
Query: 168 FSRMISLYDHHDLQDKVIEIFADMEELGVKPDEDTVRRVARAFQKLGQEENRKMVHKRY- 227
F++MIS+Y D+ K+ E+FADMEELGVKP+ V V + F KL ++ + + K+Y
Sbjct: 165 FNKMISIYYKRDMHQKLFEVFADMEELGVKPNVAIVSMVGKVFVKLEMKDKYEKLMKKYP 224
Query: 228 GCKWKYIHFKGERVRVKRDGWDEDDE 253
+W++ + KG RV+VK +E E
Sbjct: 225 PPQWEFRYIKGRRVKVKAKQLNELSE 250
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022139301.1 | 5.3e-141 | 99.60 | pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 ... | [more] |
XP_022139303.1 | 7.1e-138 | 98.41 | pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X2 ... | [more] |
XP_023541595.1 | 4.1e-125 | 89.68 | pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita ... | [more] |
XP_008464896.1 | 5.3e-125 | 88.49 | PREDICTED: pentatricopeptide repeat-containing protein At4g18975, chloroplastic ... | [more] |
XP_022942519.1 | 5.3e-125 | 89.68 | pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita ... | [more] |
Match Name | E-value | Identity | Description | |
Q2V3H0 | 9.5e-93 | 77.93 | Pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Arabidop... | [more] |
Q8LG95 | 5.6e-45 | 46.12 | Pentatricopeptide repeat-containing protein At4g21190 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CC95 | 2.6e-141 | 99.60 | pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 ... | [more] |
A0A6J1CFD3 | 3.5e-138 | 98.41 | pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X2 ... | [more] |
A0A6J1FWG3 | 2.6e-125 | 89.68 | pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Cucurbit... | [more] |
A0A5A7UD21 | 2.6e-125 | 88.49 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3CP50 | 2.6e-125 | 88.49 | pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 ... | [more] |
Match Name | E-value | Identity | Description | |
AT4G18975.1 | 6.7e-94 | 77.93 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G18975.2 | 6.7e-94 | 77.93 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G18975.3 | 6.7e-94 | 77.93 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G18975.4 | 6.7e-94 | 77.93 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G21190.1 | 4.0e-46 | 46.12 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |