MS017234 (gene) Bitter gourd (TR) v1

Overview


Name	MS017234
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	17.3 kDa class I heat shock protein-like
Location	scaffold33: 876298 .. 876780 (+)
RNA-Seq Expression	MS017234
Synteny	MS017234

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGCTGATTCCAAGCTTTTTCGGTGGCCACCGCAGCAACATCTTCGACCCCTTCTCGCTGGATGTTTGGGATCCGTTCGAGGGCTTCCCATTTCCCAATTCCACCGCATTGGCCAACGCCCATTCCTCTGCTTCTGAAACCTCTGCTTTTGCCAGCACTCGAATCGACTGGAAGGAGACCCCACAAGCCCACGTCTTCAAGGCCGATCTTCCAGGGATCAAAAAGGAGGAAGTCAAAGTGGAGGTTGAAGAGGGAAGAGTTCTGCAGATCAGTGGAGAGAGAAGCAAAGAGCAGGAGGAGAAGAACGACAAGTGGCACAGAATCGAGCGGAGCAGTGGAAAGTTCATGAGGAGATTCAGGCTGCCGGAGAATGCCAAAGTTGAGGAGGTGAAGGCCAGCATGGAGAATGGAATTCTCACTGTGACGGTGCCTAAAATGGAAGAGAAGAAGCCTGAAATCAAGTCCATTGACATCTCTGGT

mRNA sequence

ATGTCGCTGATTCCAAGCTTTTTCGGTGGCCACCGCAGCAACATCTTCGACCCCTTCTCGCTGGATGTTTGGGATCCGTTCGAGGGCTTCCCATTTCCCAATTCCACCGCATTGGCCAACGCCCATTCCTCTGCTTCTGAAACCTCTGCTTTTGCCAGCACTCGAATCGACTGGAAGGAGACCCCACAAGCCCACGTCTTCAAGGCCGATCTTCCAGGGATCAAAAAGGAGGAAGTCAAAGTGGAGGTTGAAGAGGGAAGAGTTCTGCAGATCAGTGGAGAGAGAAGCAAAGAGCAGGAGGAGAAGAACGACAAGTGGCACAGAATCGAGCGGAGCAGTGGAAAGTTCATGAGGAGATTCAGGCTGCCGGAGAATGCCAAAGTTGAGGAGGTGAAGGCCAGCATGGAGAATGGAATTCTCACTGTGACGGTGCCTAAAATGGAAGAGAAGAAGCCTGAAATCAAGTCCATTGACATCTCTGGT

Coding sequence (CDS)

ATGTCGCTGATTCCAAGCTTTTTCGGTGGCCACCGCAGCAACATCTTCGACCCCTTCTCGCTGGATGTTTGGGATCCGTTCGAGGGCTTCCCATTTCCCAATTCCACCGCATTGGCCAACGCCCATTCCTCTGCTTCTGAAACCTCTGCTTTTGCCAGCACTCGAATCGACTGGAAGGAGACCCCACAAGCCCACGTCTTCAAGGCCGATCTTCCAGGGATCAAAAAGGAGGAAGTCAAAGTGGAGGTTGAAGAGGGAAGAGTTCTGCAGATCAGTGGAGAGAGAAGCAAAGAGCAGGAGGAGAAGAACGACAAGTGGCACAGAATCGAGCGGAGCAGTGGAAAGTTCATGAGGAGATTCAGGCTGCCGGAGAATGCCAAAGTTGAGGAGGTGAAGGCCAGCATGGAGAATGGAATTCTCACTGTGACGGTGCCTAAAATGGAAGAGAAGAAGCCTGAAATCAAGTCCATTGACATCTCTGGT

Protein sequence

MSLIPSFFGGHRSNIFDPFSLDVWDPFEGFPFPNSTALANAHSSASETSAFASTRIDWKETPQAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRLPENAKVEEVKASMENGILTVTVPKMEEKKPEIKSIDISG

Homology

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BLAST of MS017234 vs. NCBI nr
Match: XP_022138993.1 (17.3 kDa class I heat shock protein-like [Momordica charantia])

HSP 1 Score: 308.1 bits (788), Expect = 4.3e-80
Identity = 156/161 (96.89%), Postives = 159/161 (98.76%), Query Frame = 0


Query: 1   MSLIPSFFGGHRSNIFDPFSLDVWDPFEGFPFPNSTALANAHSSASETSAFASTRIDWKE 60
           MSLIPS FGG RSNIFDPFSLDVWDPFEGFPFPNSTALANAHSSASETSAFASTRIDWKE
Sbjct: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPFEGFPFPNSTALANAHSSASETSAFASTRIDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRF 120
           TP+AHVFKADLPGIKKEEVKVEVEEGRVLQISGERS+EQEEKNDKWHRIERSSGKFMRRF
Sbjct: 61  TPEAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSREQEEKNDKWHRIERSSGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGILTVTVPKMEEKKPEIKSIDISG 162
           RLPENAKVEEVKASMENG+LTVTVPKMEEKKPEIKSIDISG
Sbjct: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 161

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BLAST of MS017234 vs. NCBI nr
Match: XP_022138990.1 (17.8 kDa class I heat shock protein-like isoform X1 [Momordica charantia] >XP_022138991.1 17.8 kDa class I heat shock protein-like isoform X2 [Momordica charantia])

HSP 1 Score: 302.0 bits (772), Expect = 3.1e-78
Identity = 153/161 (95.03%), Postives = 157/161 (97.52%), Query Frame = 0


Query: 1   MSLIPSFFGGHRSNIFDPFSLDVWDPFEGFPFPNSTALANAHSSASETSAFASTRIDWKE 60
           MSLIPS FGG RSNIFDPFSLDVWDPF+GFPF N TALANAHSSASETSAFA+TRIDWKE
Sbjct: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPFDGFPFSNCTALANAHSSASETSAFANTRIDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRF 120
           TPQAHVFKADLPGIKKEEVKVEVEEGRVLQISGERS+EQEEKNDKWHRIERSSGKFMRRF
Sbjct: 61  TPQAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSREQEEKNDKWHRIERSSGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGILTVTVPKMEEKKPEIKSIDISG 162
           RLPENAKVEEVKASMENG+LTVTVPKMEEKKPEIKSIDISG
Sbjct: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 161

[Close]

BLAST of MS017234 vs. NCBI nr
Match: XP_022139109.1 (18.1 kDa class I heat shock protein-like [Momordica charantia] >XP_022159337.1 18.1 kDa class I heat shock protein-like [Momordica charantia])

HSP 1 Score: 298.5 bits (763), Expect = 3.4e-77
Identity = 152/161 (94.41%), Postives = 156/161 (96.89%), Query Frame = 0


Query: 1   MSLIPSFFGGHRSNIFDPFSLDVWDPFEGFPFPNSTALANAHSSASETSAFASTRIDWKE 60
           MSLIPS FGG RSNIFDPFSLDVWDP +GFPF NSTALANA SSASETSAFA+TRIDWKE
Sbjct: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPLDGFPFSNSTALANAPSSASETSAFANTRIDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRF 120
           TPQAH+FKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRF
Sbjct: 61  TPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGILTVTVPKMEEKKPEIKSIDISG 162
           RLPENAKVEEVKASMENG+LTVTVPKMEEKKPEIKSIDISG
Sbjct: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 161

[Close]

BLAST of MS017234 vs. NCBI nr
Match: XP_023529998.1 (17.8 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 284.3 bits (726), Expect = 6.7e-73
Identity = 144/161 (89.44%), Postives = 154/161 (95.65%), Query Frame = 0


Query: 1   MSLIPSFFGGHRSNIFDPFSLDVWDPFEGFPFPNSTALANAHSSASETSAFASTRIDWKE 60
           M+LIPS FGG RSNIFDPFSLDVWDPF+GFPF  +T+LANA SSA ETSAFA+TRIDWKE
Sbjct: 1   MALIPSIFGGRRSNIFDPFSLDVWDPFQGFPF--ATSLANAPSSARETSAFANTRIDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRF 120
           TP+AH+FKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHR+ERSSGKFMRRF
Sbjct: 61  TPEAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGILTVTVPKMEEKKPEIKSIDISG 162
           RLPENAKVEEVKASMENG+LTV VPKMEEKKPE+KSIDISG
Sbjct: 121 RLPENAKVEEVKASMENGVLTVRVPKMEEKKPEVKSIDISG 159

[Close]

BLAST of MS017234 vs. NCBI nr
Match: XP_004150235.2 (18.1 kDa class I heat shock protein [Cucumis sativus] >KGN50620.1 hypothetical protein Csa_021481 [Cucumis sativus])

HSP 1 Score: 283.9 bits (725), Expect = 8.8e-73
Identity = 144/161 (89.44%), Postives = 152/161 (94.41%), Query Frame = 0


Query: 1   MSLIPSFFGGHRSNIFDPFSLDVWDPFEGFPFPNSTALANAHSSASETSAFASTRIDWKE 60
           M+L+PS FGG RSN+FDPFSLD+WDPFEGFPF NS  LANA SSA ETSAFA+TRIDWKE
Sbjct: 1   MALVPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNS--LANAPSSARETSAFANTRIDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRF 120
           TPQAH+FKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERS GKFMRRF
Sbjct: 61  TPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSCGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGILTVTVPKMEEKKPEIKSIDISG 162
           RLPENAKVEEVKASMENG+LTV VPKMEEKKPEIKSIDI+G
Sbjct: 121 RLPENAKVEEVKASMENGVLTVMVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of MS017234 vs. ExPASy Swiss-Prot
Match: P05478 (18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.1e-65
Identity = 119/161 (73.91%), Postives = 145/161 (90.06%), Query Frame = 0


Query: 1   MSLIPSFFGGHRSNIFDPFSLDVWDPFEGFPFPNSTALANAHSSASETSAFASTRIDWKE 60
           MSLIP+FFGG R+N+FDPFSLDVWDPF+ FPFPN+ + A+    + E SAF STR+DWKE
Sbjct: 1   MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRF 120
           TP+AHVFKAD+PG+KKEEVKV++E+ +VLQISGER+ E+E+KND WHR+ERSSGKFMRRF
Sbjct: 61  TPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGILTVTVPKMEEKKPEIKSIDISG 162
           RLPENAKVE+VKASMENG+LTVTVPK E KKP++K+I+ISG
Sbjct: 121 RLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 161

[Close]

BLAST of MS017234 vs. ExPASy Swiss-Prot
Match: P27880 (18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.4e-65
Identity = 125/161 (77.64%), Postives = 143/161 (88.82%), Query Frame = 0


Query: 1   MSLIPSFFGGHRSNIFDPFSLDVWDPFEGFPFPNSTALANAHSSASETSAFASTRIDWKE 60
           MSLIPSFFGG RSN+FDPFSLDVWDPF+ FPF NS   A   S   E SAF STR+DWKE
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNSALSA---SFPRENSAFVSTRVDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRF 120
           TP+AHVFKADLPG+KKEEVKVE+E+ RVLQISGERS E+E+KND+WHR+ERSSGKFMRRF
Sbjct: 61  TPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGILTVTVPKMEEKKPEIKSIDISG 162
           RLPENAK+++VKA+MENG+LTVTVPK E KKPE+K+IDISG
Sbjct: 121 RLPENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158

[Close]

BLAST of MS017234 vs. ExPASy Swiss-Prot
Match: P19037 (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 2.4e-65
Identity = 126/161 (78.26%), Postives = 144/161 (89.44%), Query Frame = 0


Query: 1   MSLIPSFFGGHRSNIFDPFSLDVWDPFEGFPFPNSTALANAHSSASETSAFASTRIDWKE 60
           MSLIPS FGG RSN+FDPFS D+WDPFEGF F  S+ALANA S+A + +AF + R+DWKE
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGF-FTPSSALANA-STARDVAAFTNARVDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRF 120
           TP+AHVFKADLPG+KKEEVKVEVE+  VLQISGERSKE EEKNDKWHR+ER+SGKFMRRF
Sbjct: 61  TPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGILTVTVPKMEEKKPEIKSIDISG 162
           RLPENAK+EEVKA+MENG+LTV VPK  EKKP++KSIDISG
Sbjct: 121 RLPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of MS017234 vs. ExPASy Swiss-Prot
Match: P27396 (17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 2.4e-65
Identity = 123/161 (76.40%), Postives = 143/161 (88.82%), Query Frame = 0


Query: 1   MSLIPSFFGGHRSNIFDPFSLDVWDPFEGFPFPNSTALANAHSSASETSAFASTRIDWKE 60
           MS+IPSFFGG RSN+FDPFSLDVWDPF+ FP   S    +A     ET+AF +T IDWKE
Sbjct: 1   MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTS----SASEFGKETAAFVNTHIDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRF 120
           TPQAHVFKADLPG+KKEEVKVE+EEG+VLQISGER+KE+EEKNDKWHR+ERSSGKF+RRF
Sbjct: 61  TPQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRF 120

Query: 121 RLPENAKVEEVKASMENGILTVTVPKMEEKKPEIKSIDISG 162
           RLPENAKV+EVKA+M NG++TVTVPK+E KKPE+K+IDISG
Sbjct: 121 RLPENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDISG 157

[Close]

BLAST of MS017234 vs. ExPASy Swiss-Prot
Match: P02519 (17.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.3e-63
Identity = 118/161 (73.29%), Postives = 143/161 (88.82%), Query Frame = 0


Query: 1   MSLIPSFFGGHRSNIFDPFSLDVWDPFEGFPFPNSTALANAHSSASETSAFASTRIDWKE 60
           MSLIPSFFGG RS++FDPFSLDVWDPF+ FPFP+S         ++E SAF STR+DWKE
Sbjct: 1   MSLIPSFFGGRRSSVFDPFSLDVWDPFKDFPFPSSL--------SAENSAFVSTRVDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRF 120
           TP+AHVFKAD+PG+KKEEVK+E+++GRVLQISGER+ E+E+KND WHR+ERSSGK +RRF
Sbjct: 61  TPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRF 120

Query: 121 RLPENAKVEEVKASMENGILTVTVPKMEEKKPEIKSIDISG 162
           RLPENAKV++VKASMENG+LTVTVPK E KKP++K+IDISG
Sbjct: 121 RLPENAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIDISG 153

[Close]

BLAST of MS017234 vs. ExPASy TrEMBL
Match: A0A6J1CEM2 (17.3 kDa class I heat shock protein-like OS=Momordica charantia OX=3673 GN=LOC111010035 PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.1e-80
Identity = 156/161 (96.89%), Postives = 159/161 (98.76%), Query Frame = 0


Query: 1   MSLIPSFFGGHRSNIFDPFSLDVWDPFEGFPFPNSTALANAHSSASETSAFASTRIDWKE 60
           MSLIPS FGG RSNIFDPFSLDVWDPFEGFPFPNSTALANAHSSASETSAFASTRIDWKE
Sbjct: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPFEGFPFPNSTALANAHSSASETSAFASTRIDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRF 120
           TP+AHVFKADLPGIKKEEVKVEVEEGRVLQISGERS+EQEEKNDKWHRIERSSGKFMRRF
Sbjct: 61  TPEAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSREQEEKNDKWHRIERSSGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGILTVTVPKMEEKKPEIKSIDISG 162
           RLPENAKVEEVKASMENG+LTVTVPKMEEKKPEIKSIDISG
Sbjct: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 161

[Close]

BLAST of MS017234 vs. ExPASy TrEMBL
Match: A0A6J1CB17 (17.8 kDa class I heat shock protein-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010034 PE=3 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.5e-78
Identity = 153/161 (95.03%), Postives = 157/161 (97.52%), Query Frame = 0


Query: 1   MSLIPSFFGGHRSNIFDPFSLDVWDPFEGFPFPNSTALANAHSSASETSAFASTRIDWKE 60
           MSLIPS FGG RSNIFDPFSLDVWDPF+GFPF N TALANAHSSASETSAFA+TRIDWKE
Sbjct: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPFDGFPFSNCTALANAHSSASETSAFANTRIDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRF 120
           TPQAHVFKADLPGIKKEEVKVEVEEGRVLQISGERS+EQEEKNDKWHRIERSSGKFMRRF
Sbjct: 61  TPQAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSREQEEKNDKWHRIERSSGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGILTVTVPKMEEKKPEIKSIDISG 162
           RLPENAKVEEVKASMENG+LTVTVPKMEEKKPEIKSIDISG
Sbjct: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 161

[Close]

BLAST of MS017234 vs. ExPASy TrEMBL
Match: A0A6J1CC00 (18.1 kDa class I heat shock protein-like OS=Momordica charantia OX=3673 GN=LOC111010100 PE=3 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.7e-77
Identity = 152/161 (94.41%), Postives = 156/161 (96.89%), Query Frame = 0


Query: 1   MSLIPSFFGGHRSNIFDPFSLDVWDPFEGFPFPNSTALANAHSSASETSAFASTRIDWKE 60
           MSLIPS FGG RSNIFDPFSLDVWDP +GFPF NSTALANA SSASETSAFA+TRIDWKE
Sbjct: 1   MSLIPSIFGGRRSNIFDPFSLDVWDPLDGFPFSNSTALANAPSSASETSAFANTRIDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRF 120
           TPQAH+FKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRF
Sbjct: 61  TPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGILTVTVPKMEEKKPEIKSIDISG 162
           RLPENAKVEEVKASMENG+LTVTVPKMEEKKPEIKSIDISG
Sbjct: 121 RLPENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDISG 161

[Close]

BLAST of MS017234 vs. ExPASy TrEMBL
Match: A0A0A0KLU0 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G197620 PE=3 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 4.2e-73
Identity = 144/161 (89.44%), Postives = 152/161 (94.41%), Query Frame = 0


Query: 1   MSLIPSFFGGHRSNIFDPFSLDVWDPFEGFPFPNSTALANAHSSASETSAFASTRIDWKE 60
           M+L+PS FGG RSN+FDPFSLD+WDPFEGFPF NS  LANA SSA ETSAFA+TRIDWKE
Sbjct: 1   MALVPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNS--LANAPSSARETSAFANTRIDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRF 120
           TPQAH+FKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERS GKFMRRF
Sbjct: 61  TPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSCGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGILTVTVPKMEEKKPEIKSIDISG 162
           RLPENAKVEEVKASMENG+LTV VPKMEEKKPEIKSIDI+G
Sbjct: 121 RLPENAKVEEVKASMENGVLTVMVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of MS017234 vs. ExPASy TrEMBL
Match: A0A5D3DH18 (17.6 kDa class I heat shock protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75208G00010 PE=3 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 5.5e-73
Identity = 144/161 (89.44%), Postives = 152/161 (94.41%), Query Frame = 0


Query: 1   MSLIPSFFGGHRSNIFDPFSLDVWDPFEGFPFPNSTALANAHSSASETSAFASTRIDWKE 60
           MSLIPS FGG RSN+FDPFSLD+WDPFEGFPF NS  LAN  SSA ETSAFA+TRIDWKE
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNS--LANVPSSAVETSAFANTRIDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRF 120
           TPQAH+FKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHR+ERSSGKF RRF
Sbjct: 61  TPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFTRRF 120

Query: 121 RLPENAKVEEVKASMENGILTVTVPKMEEKKPEIKSIDISG 162
           RLPENAKVEEVKA+MENG+LTVTVPK+EEKKPEIKSIDISG
Sbjct: 121 RLPENAKVEEVKANMENGVLTVTVPKVEEKKPEIKSIDISG 159

[Close]

BLAST of MS017234 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 249.6 bits (636), Expect = 1.7e-66
Identity = 126/161 (78.26%), Postives = 144/161 (89.44%), Query Frame = 0


Query: 1   MSLIPSFFGGHRSNIFDPFSLDVWDPFEGFPFPNSTALANAHSSASETSAFASTRIDWKE 60
           MSLIPS FGG RSN+FDPFS D+WDPFEGF F  S+ALANA S+A + +AF + R+DWKE
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGF-FTPSSALANA-STARDVAAFTNARVDWKE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRF 120
           TP+AHVFKADLPG+KKEEVKVEVE+  VLQISGERSKE EEKNDKWHR+ER+SGKFMRRF
Sbjct: 61  TPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGILTVTVPKMEEKKPEIKSIDISG 162
           RLPENAK+EEVKA+MENG+LTV VPK  EKKP++KSIDISG
Sbjct: 121 RLPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of MS017234 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 243.8 bits (621), Expect = 9.4e-65
Identity = 117/161 (72.67%), Postives = 141/161 (87.58%), Query Frame = 0


Query: 1   MSLIPSFFGGHRSNIFDPFSLDVWDPFEGFPFPNSTALANAHSSASETSAFASTRIDWKE 60
           MSL+PSFFGG R+N+FDPFSLDVWDPFEGF  P  T     ++ A + +AF + ++DW+E
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTPGLT-----NAPAKDVAAFTNAKVDWRE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRF 120
           TP+AHVFKAD+PG+KKEEVKVEVE+G +LQISGERS E EEK+D WHR+ERSSGKFMRRF
Sbjct: 61  TPEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRF 120

Query: 121 RLPENAKVEEVKASMENGILTVTVPKMEEKKPEIKSIDISG 162
           RLPENAKVEEVKASMENG+L+VTVPK++E KPE+KS+DISG
Sbjct: 121 RLPENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of MS017234 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 241.1 bits (614), Expect = 6.1e-64
Identity = 120/161 (74.53%), Postives = 142/161 (88.20%), Query Frame = 0


Query: 1   MSLIPSFFGGHRSNIFDPFSLDVWDPFEGFPFPNSTALANAHSSASETSAFASTRIDWKE 60
           MSLIPS FGG R+N+FDPFSLDV+DPFEGF  P  + LANA   A + +AF + ++DW+E
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTP--SGLANA--PAMDVAAFTNAKVDWRE 60

Query: 61  TPQAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRF 120
           TP+AHVFKADLPG++KEEVKVEVE+G +LQISGERS E EEKNDKWHR+ERSSGKF RRF
Sbjct: 61  TPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRF 120

Query: 121 RLPENAKVEEVKASMENGILTVTVPKMEEKKPEIKSIDISG 162
           RLPENAK+EE+KASMENG+L+VTVPK+ EKKPE+KSIDISG
Sbjct: 121 RLPENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of MS017234 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 209.9 bits (533), Expect = 1.5e-54
Identity = 109/165 (66.06%), Postives = 134/165 (81.21%), Query Frame = 0


Query: 1   MSLIPSFFGGHR--SNIFDPFSLDVWDPFEGFPFPNSTALANAHSSASETSAFASTRIDW 60
           MSLIPSFFG +R  ++IFDPFSLDVWDPF+   FP+S         + ETSA  + R+DW
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSL--------SGETSAITNARVDW 60

Query: 61  KETPQAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMR 120
           KET +AHVFKADLPG+KKEEVKVE+E+  VL+ISGER  E+EEK D WHR+ERSSG+F R
Sbjct: 61  KETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSR 120

Query: 121 RFRLPENAKVEEVKASMENGILTVTVPKMEE--KKPEIKSIDISG 162
           +F+LPEN K+++VKASMENG+LTVTVPK+EE  KK ++KSIDISG
Sbjct: 121 KFKLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

[Close]

BLAST of MS017234 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 207.6 bits (527), Expect = 7.4e-54
Identity = 106/162 (65.43%), Postives = 129/162 (79.63%), Query Frame = 0


Query: 1   MSLIPSFFGGH-RSNIFDPFSLDVWDPFEGFPFPNSTALANAHSSASETSAFASTRIDWK 60
           MS+IPSFF  + RSNIFDPFSLDVWDPF+            + S + E SA  + R+DW+
Sbjct: 1   MSMIPSFFNNNRRSNIFDPFSLDVWDPFKEL---------TSSSLSRENSAIVNARVDWR 60

Query: 61  ETPQAHVFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRR 120
           ETP+AHVFKADLPG+KKEEVKVE+EE  VL+ISGER  E+E+KND WHR+ERSSG+F RR
Sbjct: 61  ETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRR 120

Query: 121 FRLPENAKVEEVKASMENGILTVTVPKMEEKKPEIKSIDISG 162
           FRLPEN K+++VKA+MENG+LTVTVPK E KK ++KSI ISG
Sbjct: 121 FRLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153

The following BLAST results are available for this feature:

BLAST of MS017234 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138993.1	4.3e-80	96.89	17.3 kDa class I heat shock protein-like [Momordica charantia]	[more]
XP_022138990.1	3.1e-78	95.03	17.8 kDa class I heat shock protein-like isoform X1 [Momordica charantia] >XP_02...	[more]
XP_022139109.1	3.4e-77	94.41	18.1 kDa class I heat shock protein-like [Momordica charantia] >XP_022159337.1 1...	[more]
XP_023529998.1	6.7e-73	89.44	17.8 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_004150235.2	8.8e-73	89.44	18.1 kDa class I heat shock protein [Cucumis sativus] >KGN50620.1 hypothetical p...	[more]

BLAST of MS017234 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P05478	1.1e-65	73.91	18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=...	[more]
P27880	1.4e-65	77.64	18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 S...	[more]
P19037	2.4e-65	78.26	18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 P...	[more]
P27396	2.4e-65	76.40	17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1	[more]
P02519	1.3e-63	73.29	17.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=...	[more]

BLAST of MS017234 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CEM2	2.1e-80	96.89	17.3 kDa class I heat shock protein-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1CB17	1.5e-78	95.03	17.8 kDa class I heat shock protein-like isoform X1 OS=Momordica charantia OX=36...	[more]
A0A6J1CC00	1.7e-77	94.41	18.1 kDa class I heat shock protein-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A0A0KLU0	4.2e-73	89.44	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G197620 PE=3 S...	[more]
A0A5D3DH18	5.5e-73	89.44	17.6 kDa class I heat shock protein 3-like OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of MS017234 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59720.1	1.7e-66	78.26	heat shock protein 18.2	[more]
AT3G46230.1	9.4e-65	72.67	heat shock protein 17.4	[more]
AT1G53540.1	6.1e-64	74.53	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	1.5e-54	66.06	HSP20-like chaperones superfamily protein	[more]
AT2G29500.1	7.4e-54	65.43	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 57..160 e-value: 5.1E-31 score: 106.9
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 47..161 score: 32.047264
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 10..161 e-value: 2.2E-52 score: 178.8
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 32..161
None	No IPR available	PANTHER	PTHR11527:SF325	17.8 KDA CLASS I HEAT SHOCK PROTEIN-LIKE	coord: 1..161
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 55..146 e-value: 3.75489E-49 score: 151.689
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 1..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS017234.1	MS017234.1	mRNA