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MS017222 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGGTCTAAATCCAACCAGTATCCGAACACTTCATTACTCCAGATCGAGGGTGTTAATTCCAAGGATGAGGTTTCCTGGTACCAAGGAAAGCGATTGGCTTATATCTACAAGGCTAAAGTGAAGAAGAATGGGACACATTATCGTTGCATTTGGGGCAAGGTCGCCAGGCCTCATGGTAACAGTGGCATTGTTAGAGCGAAGTTTAAGTCTAATCTGCCACCAAAGTCCATGGTATGGTGAAAAATAAAGCTGTCTAATGTGTTGGAGACCTCCCTATATTGTTTATTAACAATTTTTTTAAACCTCTATGCAGGGTGACAGGGTCAGAGTATTCATGTACCCCAGCAACATT AGGTCTAAATCCAACCAGTATCCGAACACTTCATTACTCCAGATCGAGGGTGTTAATTCCAAGGATGAGGTTTCCTGGTACCAAGGAAAGCGATTGGCTTATATCTACAAGGCTAAAGTGAAGAAGAATGGGACACATTATCGTTGCATTTGGGGCAAGGTCGCCAGGCCTCATGGTAACAGTGGCATTGTTAGAGCGAAGTTTAAGTCTAATCTGCCACCAAAGTCCATGGGTGACAGGGTCAGAGTATTCATGTACCCCAGCAACATT AGGTCTAAATCCAACCAGTATCCGAACACTTCATTACTCCAGATCGAGGGTGTTAATTCCAAGGATGAGGTTTCCTGGTACCAAGGAAAGCGATTGGCTTATATCTACAAGGCTAAAGTGAAGAAGAATGGGACACATTATCGTTGCATTTGGGGCAAGGTCGCCAGGCCTCATGGTAACAGTGGCATTGTTAGAGCGAAGTTTAAGTCTAATCTGCCACCAAAGTCCATGGGTGACAGGGTCAGAGTATTCATGTACCCCAGCAACATT RSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI Homology
BLAST of MS017222 vs. NCBI nr
Match: XP_022139205.1 (60S ribosomal protein L35a-1-like [Momordica charantia]) HSP 1 Score: 190.3 bits (482), Expect = 7.4e-45 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of MS017222 vs. NCBI nr
Match: XP_022156899.1 (60S ribosomal protein L35a-1 [Momordica charantia]) HSP 1 Score: 190.3 bits (482), Expect = 7.4e-45 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of MS017222 vs. NCBI nr
Match: XP_022957040.1 (60S ribosomal protein L35a-1 [Cucurbita moschata] >XP_022978196.1 60S ribosomal protein L35a-1-like [Cucurbita maxima] >XP_023529930.1 60S ribosomal protein L35a-1 [Cucurbita pepo subsp. pepo] >KAG7031585.1 60S ribosomal protein L35a-1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 188.7 bits (478), Expect = 2.1e-44 Identity = 89/90 (98.89%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of MS017222 vs. NCBI nr
Match: XP_008463199.1 (PREDICTED: 60S ribosomal protein L35a-1 [Cucumis melo] >XP_011654980.1 60S ribosomal protein L35a-1 [Cucumis sativus] >KAA0037334.1 Ribosomal protein L35A [Cucumis melo var. makuwa] >KGN50623.1 hypothetical protein Csa_021400 [Cucumis sativus] >TYJ97573.1 Ribosomal protein L35A [Cucumis melo var. makuwa]) HSP 1 Score: 188.7 bits (478), Expect = 2.1e-44 Identity = 89/90 (98.89%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of MS017222 vs. NCBI nr
Match: XP_022156649.1 (60S ribosomal protein L35a-1-like [Momordica charantia]) HSP 1 Score: 187.2 bits (474), Expect = 6.2e-44 Identity = 89/90 (98.89%), Postives = 89/90 (98.89%), Query Frame = 0
BLAST of MS017222 vs. ExPASy Swiss-Prot
Match: Q9LMK0 (60S ribosomal protein L35a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35AA PE=3 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 3.6e-42 Identity = 77/90 (85.56%), Postives = 85/90 (94.44%), Query Frame = 0
BLAST of MS017222 vs. ExPASy Swiss-Prot
Match: Q9C912 (60S ribosomal protein L35a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35AC PE=3 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 3.6e-42 Identity = 77/90 (85.56%), Postives = 86/90 (95.56%), Query Frame = 0
BLAST of MS017222 vs. ExPASy Swiss-Prot
Match: Q9FZH0 (60S ribosomal protein L35a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35AB PE=3 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 6.1e-42 Identity = 77/90 (85.56%), Postives = 86/90 (95.56%), Query Frame = 0
BLAST of MS017222 vs. ExPASy Swiss-Prot
Match: P51422 (60S ribosomal protein L35a-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35AD PE=3 SV=2) HSP 1 Score: 170.6 bits (431), Expect = 7.9e-42 Identity = 77/90 (85.56%), Postives = 86/90 (95.56%), Query Frame = 0
BLAST of MS017222 vs. ExPASy Swiss-Prot
Match: Q9USX4 (60S ribosomal protein L33-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl35b PE=3 SV=2) HSP 1 Score: 108.2 bits (269), Expect = 4.8e-23 Identity = 48/90 (53.33%), Postives = 66/90 (73.33%), Query Frame = 0
BLAST of MS017222 vs. ExPASy TrEMBL
Match: A0A6J1CBN5 (60S ribosomal protein L35a-1-like OS=Momordica charantia OX=3673 GN=LOC111010174 PE=3 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 3.6e-45 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of MS017222 vs. ExPASy TrEMBL
Match: A0A6J1DUY8 (60S ribosomal protein L35a-1 OS=Momordica charantia OX=3673 GN=LOC111023732 PE=3 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 3.6e-45 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of MS017222 vs. ExPASy TrEMBL
Match: A0A5A7T1I6 (Ribosomal protein L35A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G00970 PE=3 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 1.0e-44 Identity = 89/90 (98.89%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of MS017222 vs. ExPASy TrEMBL
Match: A0A6J1IM24 (60S ribosomal protein L35a-1-like OS=Cucurbita maxima OX=3661 GN=LOC111478250 PE=3 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 1.0e-44 Identity = 89/90 (98.89%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of MS017222 vs. ExPASy TrEMBL
Match: A0A0A0KM11 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G198130 PE=3 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 1.0e-44 Identity = 89/90 (98.89%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of MS017222 vs. TAIR 10
Match: AT1G07070.1 (Ribosomal protein L35Ae family protein ) HSP 1 Score: 171.8 bits (434), Expect = 2.5e-43 Identity = 77/90 (85.56%), Postives = 85/90 (94.44%), Query Frame = 0
BLAST of MS017222 vs. TAIR 10
Match: AT1G74270.1 (Ribosomal protein L35Ae family protein ) HSP 1 Score: 171.8 bits (434), Expect = 2.5e-43 Identity = 77/90 (85.56%), Postives = 86/90 (95.56%), Query Frame = 0
BLAST of MS017222 vs. TAIR 10
Match: AT1G41880.1 (Ribosomal protein L35Ae family protein ) HSP 1 Score: 171.0 bits (432), Expect = 4.3e-43 Identity = 77/90 (85.56%), Postives = 86/90 (95.56%), Query Frame = 0
BLAST of MS017222 vs. TAIR 10
Match: AT3G55750.1 (Ribosomal protein L35Ae family protein ) HSP 1 Score: 170.6 bits (431), Expect = 5.6e-43 Identity = 77/90 (85.56%), Postives = 86/90 (95.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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