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MS017208 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGACCAAAAACGCCAAGAAGGCCAATCTCTTAGATCACCACTCCATCAAACACATACTCGACGAATCCGTCTCTGAGGTAATTCAATTTCATCCGCCCTCTCTTCAGATCCTCTTCTCATCAATTTTTTCTCTAGGTTTCTTTCTGAAATCTTCCGTTTTTTGAGCGTTTGGTTGCAGATTGTGACCAGTCGCGGGTATGTGGAAGATGTGAGGTTGAGTAATGTCAAATTGGTCATGGGCACTGTTATTATAATCATAGCTTTGGTGGCTCAGTTTTACAAAAAGAAGTTCCCTGAGAATCGCGATTTCTTGATCGGCTGCATAATATTATATCCTTTTTTTTTCGTGTGGTTGTATAAATTTGTCTGAATTACCGTTTTTTTTCCCTCTACATTTAGATCTTCCGCTGGGAGATTGAATTTCATTTTTTGATTGGCGTTATCTTATGGGAATGGACATTGGATCGAATGGTGGATTTTTTATCCGCTTTCCCTCAATTTCCTGTTGTCATGTTCGAATGCTGAAGCGTATTGTACTCTTTCTGGTGCTATCATGTGATCTTTAACTCTGGCAAGTATGTAGTCTTCAATGGGATTTTGCAGTTGATTGTTTACACCAAGGAGAAGAACGCAATTTTGTTCACCTATCCTCCTGCAGTAAGTTTCTATAGCGTTCAGAATTACTCTGCTTTCTAGCCCACTTATATGTTTATGACCACTAAAGAAAGCATTAACATCATGAATAGTCATGCATGATTTTGGGATTTCTTTGAGCTAGGTAATGACTAACTGGCTACATTTAGGGCTTTGAATTTTTTTAGCTCAAAGAACCACAGAGATTCTTTGAGTTTTACCAATGTGATGAGTTTTTTACTTTTCTAATCATAACTTCTGAACTTGCATTTATACTTCAGAGAAGCTTAACAAAACTTTTGTCTTCTAAGCTAGTTTCTGTATTCTGGAAGGTTTAAACGGTTTCGAATTACTGTGGAGCTCAGTTGTTTGGGTCATTGATTTCAAAAAACTGCTTTCCCTTTCTCTTTTAGTCTATTTTCATAGATGGCACGTTTCTAGAATAACTGAAGTTCTTACTTTCTTCAAATTTCATTGGCTTGTGAATAATGATCGTAATTTTGACCTTTTCTAGCTGCCTAAAAGCTATTTTTAAAGACCGTTTGAAACAAAAACAGGAAACTACTTTTTAGAATAGTTCTTGATTTCTGCAATTTCATGTTACATTTCAAACTGTTTAACAGCCCCTTGTCAAATGGCGCTCAAGTTAACTCTCTTGGTTGGTTTTCTCTATTTATTTACAATTTCTCGAGTACCCTGCCACATTTCAGAAGTAACAACTTCTTTGCTTCTCATGACTGGAAGAAATTTGGAAGGCTTTCTTTTACCCCTGTTTTAAGATCTTGTATTAGTGAGTTATACTTCCATTTTCGAAGGAGTTTGTTATTAGGATACTTCTGGGAGTTGGGAAGATAGGAGGCTTACATATGACAATTGAGTGCCACCATGTACACATACTTTCTAGGAATCTATGGGAAATTTGGACTCCATCTTCTCATAATGTAAGGATAGCCAATTTTGTTCCGTGCACGAGAATGACCCTGTTGTCTGAAACTTCATACATGTTGAACTTGTTACGAACATTGGTCATTGTTAAATCACCAATAAACTGAAAAACTTAAGCAGATGGATTAGACTAAACTCAATCACTTATAGATATCTTAACACTCCCCTTCACTCGTGGGTTTGAAAATTTGCATAAGGCCTAGCGAGTGGAAATCAAGATTAAATGGGGAGGAAATGACAATACAGGGGTTTATCTCTTAGCCTTGATACTATGTTAAATTACCAATATACCAAAATGCTTAAGCTAATGGGTTATGATAAATTTGATTCATTTGTAGATTCTTAACAATCATCGCGTTGCAATTTTTCTCTGCACAGGGATCCTTCACCAGCACAGGATTGGTAGTCTCTTCAAAGTTGCCCAGATTCTCTGATCTGTACACGCTGATCATATCTAGTTCAGATCCCAATTCAATCTCCGCTAACAAACCAGTGGAATTTACCAAGAGTGTCACTCAATGGTCTCTTCCTTTCTCTACACTACATTCTGGAATC ATGGCGACCAAAAACGCCAAGAAGGCCAATCTCTTAGATCACCACTCCATCAAACACATACTCGACGAATCCGTCTCTGAGATTGTGACCAGTCGCGGGTATGTGGAAGATGTGAGGTTGAGTAATGTCAAATTGGTCATGGGCACTGTTATTATAATCATAGCTTTGGTGGCTCAGTTTTACAAAAAGAAGTTCCCTGAGAATCGCGATTTCTTGATCGGCTGCATAATATTATATCCTTTTTTTTTCGTCGTATTGTACTCTTTCTGGTGCTATCATGTGATCTTTAACTCTGGCAAGTATGTAGTCTTCAATGGGATTTTGCAGTTGATTGTTTACACCAAGGAGAAGAACGCAATTTTGTTCACCTATCCTCCTGCAGGATCCTTCACCAGCACAGGATTGGTAGTCTCTTCAAAGTTGCCCAGATTCTCTGATCTGTACACGCTGATCATATCTAGTTCAGATCCCAATTCAATCTCCGCTAACAAACCAGTGGAATTTACCAAGAGTGTCACTCAATGGTCTCTTCCTTTCTCTACACTACATTCTGGAATC ATGGCGACCAAAAACGCCAAGAAGGCCAATCTCTTAGATCACCACTCCATCAAACACATACTCGACGAATCCGTCTCTGAGATTGTGACCAGTCGCGGGTATGTGGAAGATGTGAGGTTGAGTAATGTCAAATTGGTCATGGGCACTGTTATTATAATCATAGCTTTGGTGGCTCAGTTTTACAAAAAGAAGTTCCCTGAGAATCGCGATTTCTTGATCGGCTGCATAATATTATATCCTTTTTTTTTCGTCGTATTGTACTCTTTCTGGTGCTATCATGTGATCTTTAACTCTGGCAAGTATGTAGTCTTCAATGGGATTTTGCAGTTGATTGTTTACACCAAGGAGAAGAACGCAATTTTGTTCACCTATCCTCCTGCAGGATCCTTCACCAGCACAGGATTGGTAGTCTCTTCAAAGTTGCCCAGATTCTCTGATCTGTACACGCTGATCATATCTAGTTCAGATCCCAATTCAATCTCCGCTAACAAACCAGTGGAATTTACCAAGAGTGTCACTCAATGGTCTCTTCCTTTCTCTACACTACATTCTGGAATC MATKNAKKANLLDHHSIKHILDESVSEIVTSRGYVEDVRLSNVKLVMGTVIIIIALVAQFYKKKFPENRDFLIGCIILYPFFFVVLYSFWCYHVIFNSGKYVVFNGILQLIVYTKEKNAILFTYPPAGSFTSTGLVVSSKLPRFSDLYTLIISSSDPNSISANKPVEFTKSVTQWSLPFSTLHSGI Homology
BLAST of MS017208 vs. NCBI nr
Match: XP_022156934.1 (probable signal peptidase complex subunit 2 [Momordica charantia]) HSP 1 Score: 283.9 bits (725), Expect = 1.0e-72 Identity = 155/186 (83.33%), Postives = 156/186 (83.87%), Query Frame = 0
BLAST of MS017208 vs. NCBI nr
Match: KAG6600011.1 (putative signal peptidase complex subunit 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 278.1 bits (710), Expect = 5.6e-71 Identity = 149/186 (80.11%), Postives = 155/186 (83.33%), Query Frame = 0
BLAST of MS017208 vs. NCBI nr
Match: XP_022942200.1 (probable signal peptidase complex subunit 2 [Cucurbita moschata] >XP_023529201.1 probable signal peptidase complex subunit 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 274.2 bits (700), Expect = 8.0e-70 Identity = 148/186 (79.57%), Postives = 153/186 (82.26%), Query Frame = 0
BLAST of MS017208 vs. NCBI nr
Match: XP_022996614.1 (probable signal peptidase complex subunit 2 [Cucurbita maxima]) HSP 1 Score: 272.3 bits (695), Expect = 3.0e-69 Identity = 147/186 (79.03%), Postives = 152/186 (81.72%), Query Frame = 0
BLAST of MS017208 vs. NCBI nr
Match: XP_008463218.1 (PREDICTED: probable signal peptidase complex subunit 2 [Cucumis melo]) HSP 1 Score: 271.2 bits (692), Expect = 6.8e-69 Identity = 145/186 (77.96%), Postives = 153/186 (82.26%), Query Frame = 0
BLAST of MS017208 vs. ExPASy Swiss-Prot
Match: P58684 (Probable signal peptidase complex subunit 2 OS=Arabidopsis thaliana OX=3702 GN=At2g39960 PE=2 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 3.7e-62 Identity = 127/183 (69.40%), Postives = 139/183 (75.96%), Query Frame = 0
BLAST of MS017208 vs. ExPASy Swiss-Prot
Match: Q5BJI9 (Probable signal peptidase complex subunit 2 OS=Danio rerio OX=7955 GN=spcs2 PE=2 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.5e-07 Identity = 50/171 (29.24%), Postives = 77/171 (45.03%), Query Frame = 0
BLAST of MS017208 vs. ExPASy Swiss-Prot
Match: Q55E35 (Signal peptidase complex subunit 2 OS=Dictyostelium discoideum OX=44689 GN=spcs2 PE=3 SV=2) HSP 1 Score: 53.1 bits (126), Expect = 3.8e-06 Identity = 34/102 (33.33%), Postives = 57/102 (55.88%), Query Frame = 0
BLAST of MS017208 vs. ExPASy TrEMBL
Match: A0A6J1DV24 (probable signal peptidase complex subunit 2 OS=Momordica charantia OX=3673 GN=LOC111023759 PE=3 SV=1) HSP 1 Score: 283.9 bits (725), Expect = 4.9e-73 Identity = 155/186 (83.33%), Postives = 156/186 (83.87%), Query Frame = 0
BLAST of MS017208 vs. ExPASy TrEMBL
Match: A0A6J1FVT7 (probable signal peptidase complex subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111447327 PE=3 SV=1) HSP 1 Score: 274.2 bits (700), Expect = 3.9e-70 Identity = 148/186 (79.57%), Postives = 153/186 (82.26%), Query Frame = 0
BLAST of MS017208 vs. ExPASy TrEMBL
Match: A0A6J1K981 (probable signal peptidase complex subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111491800 PE=3 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 1.5e-69 Identity = 147/186 (79.03%), Postives = 152/186 (81.72%), Query Frame = 0
BLAST of MS017208 vs. ExPASy TrEMBL
Match: A0A5A7T1V9 (Putative signal peptidase complex subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G00680 PE=3 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 3.3e-69 Identity = 148/187 (79.14%), Postives = 157/187 (83.96%), Query Frame = 0
BLAST of MS017208 vs. ExPASy TrEMBL
Match: A0A1S3CIQ9 (probable signal peptidase complex subunit 2 OS=Cucumis melo OX=3656 GN=LOC103501424 PE=3 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 3.3e-69 Identity = 145/186 (77.96%), Postives = 153/186 (82.26%), Query Frame = 0
BLAST of MS017208 vs. TAIR 10
Match: AT2G39960.1 (Microsomal signal peptidase 25 kDa subunit (SPC25) ) HSP 1 Score: 239.2 bits (609), Expect = 2.7e-63 Identity = 127/183 (69.40%), Postives = 139/183 (75.96%), Query Frame = 0
BLAST of MS017208 vs. TAIR 10
Match: AT4G04200.1 (Microsomal signal peptidase 25 kDa subunit (SPC25) ) HSP 1 Score: 200.3 bits (508), Expect = 1.4e-51 Identity = 113/185 (61.08%), Postives = 128/185 (69.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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