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MS017199 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAGATTGTTCGTGGTGAATCTGGAGGGGCAGATCTATAGTTGCAAGTACTGCGGAACCCATCTTGCTCTTTACGACGATATCATCTCCAAGGTTTCTCTTCTTTTACCTGTTTTTGTTTTCTCTGGTTCCATGTCACTTTATCATACTTTTCTTTGAATTTCTTGTATGGGTCCCTTTTCTTCCGCCATTGGAGAACTGTTTTTGTGGTCTGTTTCAAAATTTCAATGTTCTTTTTTTACTGCTTGAATTTTGTTTGCTGCTCAATTTTATAAGTTGGGAACTTGAAACTAAGGAGGTCTAGCTAGAAAGTTTTTAGCTGAGGAAATTTTGGTGGTCTAAGAACCAAGACTGGATGCACTCAAAGTCATTGAGTTGTTTTTTTATTCTTGCACATGATGCTATCTGAGTGTCCACCAATATGCTGAAACCCACATTCTGACTCCATGTACTGTTTGTGTTGTTCTGTTCAGTCCTTTCACTGCAAGCATGGGAAAGCTTACCTCTTCAATAAGGTGTAAGTTCTTCTTGATTTTGGAGACACTGTGGTTGAATAATGCAACTCATTTGGAGTTTGAACATATTAACACACACATCCCCTCCCTCAATCCTTAAGAGAATGTTTGGCTTGTGGTTTTTGTTTCAGTTTATCAAGTATGGAGTTGGGAAGTTTGAAATTGTGTGATATTACTCTGAATTCTACAAAGAAAATAGATTATAAAAATTTGAGTTTGTGGAACTTGGTGTGTGATTCTTAGATTTATGATTTGTAAATGTCAGCATGTAATATAAAATATGAGTTTCATAGGCTTGGGTTTATGCAATGGGATTAACAATTTTATAGTATGGATAAACACGATAATGGATGAGGCGTGTTGTCCCCCCTTTTGTGATAGGGGAAAGTTTTTGTGGCAAGCCTGTTTCTTTGTTACTGTGTGGGGTATTTAGCTTGAGAGAACAATAGAATCTTTAGTGGTGGATAGATCCAGGGAGTATGTTTGGGAGCTTATTTGATGTAATACTTCCACGTGGGGTCGGTTTCTAAGGATTTTTGTAATTATCAGTTAGGTGTTATTCTTGAAGCCTCTTTCTCTAGAGGTGTTTTTGTATGCTCTTATATATTTTTTCACATCTCTCGATGAAAGCTTGATTTCTTATTAAAAAAAAAAAGTATGGGATAAACAAATTCATATGCTGAATATATGCTGAGTTTCTCAACATTGAGCTATACGAGCCAAATACACTCTCTGGATTTGAACTCTGCAAAGGTCTGTTTCAAAGATACTTTGCCAAAAGGGAAAAAAATACATCGTCAGCAGCAAATACTGCTTCTGTCATTAACGATCATATGTTTTGTATTTGTTGCATACTATAACTGAGGTCTTCTTTCTTGGTGGATATGGTTCCCCTTTGAATACACTAATTAGTAGTTTGTTGTTATGTTTCATGACAGAACTCATGAGGTTCATGTAAATTACTTAGAAAAGTGATTTTACTGAAAATTCCTTTTTAAAGAATCCAAAGCTCCACAACCTAGACTAATCCCTTAACCCGCTCATATAGTGAATCGGCGATGTACATTCTCTCTCTGGTAACGACACAATGAGTTTGAGTTTCTGTAGAACTGTTTGTTTTAACTTCTAGAAGTGCTTCATGTCGTAGACTCGGTTCTCATGGTCGGGTTTTTTCTTTTCAGGGTAAACGTCTCCTCCGGTAAGATAGAAGATAGATTGATGATGACGGGGATGCATACGGTTGCTGATATCTTCTGTGTGGGGTGTGGATCAATAGTGGGGTGGAAATATGTAAGAACAGGAGCAAACATTTGAAAGTTGAGCTATTCTATGCATCTTACATCTTAGTTATTCCCATGGTTTCTTCCTTTCAGGAGACTGCCCATGAAAAGAACCAAAAATACAAGGAGGGAAAATCTGTACTTGAGAGG ATGGGAAGATTGTTCGTGGTGAATCTGGAGGGGCAGATCTATAGTTGCAAGTACTGCGGAACCCATCTTGCTCTTTACGACGATATCATCTCCAAGGTTTCTCTTCTTTTACCTGTTTTTGTTTTCTCTGTGCTTCATGTCGTAGACTCGGTTCTCATGGTCGGGTTTTTTCTTTTCAGGGTAAACGTCTCCTCCGGTAAGATAGAAGATAGATTGATGATGACGGGGATGCATACGGTTGCTGATATCTTCTGTGTGGGGTGTGGATCAATAGTGGGGTGGAAATATGAGACTGCCCATGAAAAGAACCAAAAATACAAGGAGGGAAAATCTGTACTTGAGAGG ATGGGAAGATTGTTCGTGGTGAATCTGGAGGGGCAGATCTATAGTTGCAAGTACTGCGGAACCCATCTTGCTCTTTACGACGATATCATCTCCAAGGTTTCTCTTCTTTTACCTGTTTTTGTTTTCTCTGTGCTTCATGTCGTAGACTCGGTTCTCATGGTCGGGTTTTTTCTTTTCAGGGTAAACGTCTCCTCCGGTAAGATAGAAGATAGATTGATGATGACGGGGATGCATACGGTTGCTGATATCTTCTGTGTGGGGTGTGGATCAATAGTGGGGTGGAAATATGAGACTGCCCATGAAAAGAACCAAAAATACAAGGAGGGAAAATCTGTACTTGAGAGG MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKVSLLLPVFVFSVLHVVDSVLMVGFFLFRVNVSSGKIEDRLMMTGMHTVADIFCVGCGSIVGWKYETAHEKNQKYKEGKSVLER Homology
BLAST of MS017199 vs. NCBI nr
Match: XP_022156902.1 (protein yippee-like [Momordica charantia] >XP_022156903.1 protein yippee-like [Momordica charantia]) HSP 1 Score: 169.9 bits (429), Expect = 1.3e-38 Identity = 91/117 (77.78%), Postives = 92/117 (78.63%), Query Frame = 0
BLAST of MS017199 vs. NCBI nr
Match: XP_038893239.1 (protein yippee-like isoform X1 [Benincasa hispida]) HSP 1 Score: 161.4 bits (407), Expect = 4.7e-36 Identity = 87/117 (74.36%), Postives = 89/117 (76.07%), Query Frame = 0
BLAST of MS017199 vs. NCBI nr
Match: XP_038893240.1 (protein yippee-like isoform X2 [Benincasa hispida]) HSP 1 Score: 160.6 bits (405), Expect = 8.0e-36 Identity = 87/117 (74.36%), Postives = 89/117 (76.07%), Query Frame = 0
BLAST of MS017199 vs. NCBI nr
Match: XP_031740894.1 (protein yippee-like isoform X2 [Cucumis sativus] >KAE8648019.1 hypothetical protein Csa_021405 [Cucumis sativus]) HSP 1 Score: 157.9 bits (398), Expect = 5.2e-35 Identity = 83/116 (71.55%), Postives = 90/116 (77.59%), Query Frame = 0
BLAST of MS017199 vs. NCBI nr
Match: XP_031740895.1 (protein yippee-like isoform X4 [Cucumis sativus]) HSP 1 Score: 157.9 bits (398), Expect = 5.2e-35 Identity = 85/117 (72.65%), Postives = 89/117 (76.07%), Query Frame = 0
BLAST of MS017199 vs. ExPASy Swiss-Prot
Match: P59234 (Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 7.8e-34 Identity = 76/115 (66.09%), Postives = 87/115 (75.65%), Query Frame = 0
BLAST of MS017199 vs. ExPASy Swiss-Prot
Match: Q9C777 (Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 4.0e-30 Identity = 71/117 (60.68%), Postives = 83/117 (70.94%), Query Frame = 0
BLAST of MS017199 vs. ExPASy Swiss-Prot
Match: Q9SR97 (Protein yippee-like At3g08990 OS=Arabidopsis thaliana OX=3702 GN=At3g08990 PE=2 SV=2) HSP 1 Score: 124.8 bits (312), Expect = 6.4e-28 Identity = 66/119 (55.46%), Postives = 82/119 (68.91%), Query Frame = 0
BLAST of MS017199 vs. ExPASy Swiss-Prot
Match: Q9LY56 (Protein yippee-like At3g55890 OS=Arabidopsis thaliana OX=3702 GN=At3g55890 PE=2 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.2e-26 Identity = 64/114 (56.14%), Postives = 76/114 (66.67%), Query Frame = 0
BLAST of MS017199 vs. ExPASy Swiss-Prot
Match: Q9FN32 (Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 2.1e-26 Identity = 62/115 (53.91%), Postives = 76/115 (66.09%), Query Frame = 0
BLAST of MS017199 vs. ExPASy TrEMBL
Match: A0A6J1DRW0 (Protein yippee-like OS=Momordica charantia OX=3673 GN=LOC111023736 PE=3 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 6.4e-39 Identity = 91/117 (77.78%), Postives = 92/117 (78.63%), Query Frame = 0
BLAST of MS017199 vs. ExPASy TrEMBL
Match: A0A0A0KQH0 (Yippee domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G201320 PE=3 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 2.5e-35 Identity = 85/117 (72.65%), Postives = 89/117 (76.07%), Query Frame = 0
BLAST of MS017199 vs. ExPASy TrEMBL
Match: A0A1S4E425 (Protein yippee-like OS=Cucumis melo OX=3656 GN=LOC103501434 PE=3 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 7.3e-35 Identity = 84/117 (71.79%), Postives = 89/117 (76.07%), Query Frame = 0
BLAST of MS017199 vs. ExPASy TrEMBL
Match: A0A5D3BCE7 (Protein yippee-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G00070 PE=3 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 7.3e-35 Identity = 84/117 (71.79%), Postives = 89/117 (76.07%), Query Frame = 0
BLAST of MS017199 vs. ExPASy TrEMBL
Match: A0A6J1JI75 (Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111484812 PE=3 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 1.1e-33 Identity = 83/117 (70.94%), Postives = 87/117 (74.36%), Query Frame = 0
BLAST of MS017199 vs. TAIR 10
Match: AT2G40110.1 (Yippee family putative zinc-binding protein ) HSP 1 Score: 146.4 bits (368), Expect = 1.5e-35 Identity = 79/117 (67.52%), Postives = 85/117 (72.65%), Query Frame = 0
BLAST of MS017199 vs. TAIR 10
Match: AT2G40110.2 (Yippee family putative zinc-binding protein ) HSP 1 Score: 146.4 bits (368), Expect = 1.5e-35 Identity = 79/117 (67.52%), Postives = 85/117 (72.65%), Query Frame = 0
BLAST of MS017199 vs. TAIR 10
Match: AT3G11230.1 (Yippee family putative zinc-binding protein ) HSP 1 Score: 132.1 bits (331), Expect = 2.8e-31 Identity = 71/117 (60.68%), Postives = 83/117 (70.94%), Query Frame = 0
BLAST of MS017199 vs. TAIR 10
Match: AT3G11230.2 (Yippee family putative zinc-binding protein ) HSP 1 Score: 132.1 bits (331), Expect = 2.8e-31 Identity = 71/117 (60.68%), Postives = 83/117 (70.94%), Query Frame = 0
BLAST of MS017199 vs. TAIR 10
Match: AT3G08990.1 (Yippee family putative zinc-binding protein ) HSP 1 Score: 124.8 bits (312), Expect = 4.5e-29 Identity = 66/119 (55.46%), Postives = 82/119 (68.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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