MS017196 (gene) Bitter gourd (TR) v1

Overview
NameMS017196
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionnuclear pore complex protein NUP88
Locationscaffold33: 601421 .. 607408 (+)
RNA-Seq ExpressionMS017196
SyntenyMS017196
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTACAATTTTGAGGACAACGAACCTGATTCCGGCCACCATCGATCTCCGACTCCAAAACTAGACGCCGATTGGGTCCCTCTACAAACGCACCCCATTTTCACCGCCGCCGCCTCCGATTTTGGCGGCACCGTTTCTCCGCCTCTAAGAAACCTCCTTGCGTCGGACGGCGCCTCCCGGCTCTTTTTCTGGGACTGCACCAAACTCTGCGTTCACCGGATTTCCATACGCCTCGGTGAACCCGAACCCACCTCCGTCCTCGCCGCTTCTCCTTCCAAAGTCGGTTATCTTTTCTCTTTCTAAACTTGGTTTAATAGGAATTCTGCTTGTTCTCTCTCAAAACTGACTTGGGATTGAAGAGAAAACCCTTTTGTTCTGAACTGCTGTGTGTTCTAATTTGCCCTTCTTTTTTTCTTCCTTTTGTTCTTAGCTTCTGTGTGTTCTAATTTGCCACTTTTTTCTTGTCATTATTCCTGATATCAATGCTTTGGAAACAGGTACTGCAACCGGATGTGAAACTCGACTTTGTTGTTCACAAGATTTCTATCAATAAGAATGGATCAGCATTGGCCCTTGTGGGTCCAGGTGGTTTGTTCATAATGTATCTCTATGGCCACACTTCTTCCAGAGAGAACACTCTCATCTGTAGGTGAGGAACAGCCCTACAGCTGAGTTAATGCTTTTAAGACTGCTTTCCATCTGTTGTGGCTTTTGTTCATATTTTGTTGCAAAAGAATCACAAAATGGACAGCCTGAGGGCTGAACTGTCGAAGAAAGGCCTTCCAATTGTTGTTTATTTGTTTATTTTTTGATAACTGAGAATTTATTGTAGTTTGAACACCACAAAGAAAGCATCATAATAAGCAAAAGACTTCTCCAAAGTTACGATTTCTTCAAAAAGTCTGGTTTCTTTCCTCCCAAATCTTCCTAACCATGCAATTCCAAAGGATTTTAGCCTTGCATTTGTAAATACTTTTTGGTTCTTTTTCATTTTATGTAAACTTCATGAAAGGATGTCATGCATTGTATTCCATCGAGTTCCTTCTGAAAGAATCTGTCAATTTGCTTACAGAACTGTTAGAGTTGGTCCGCAGATCTACTACGGTGGCCACGATGTCATACGCACGCTACAAGTTTCTTGGCACCCTTATAGTGACTTCCATCTGGGAGTCCTTTCTTCTGATTCTGTTTTCAGGTATTACATTTTCTGAATAAAGACCCTATAATCACCTTTCATGAAGGAAATGCAAATTCTATACCAGGTATCATATTTGAAAGTTGAAAGTATGAGGGACATAAAATAAGTGTAAAAATTCATGGACTAAAATTAGATTTTTCTTTTTGAGACCAAGTTAAAGAACAAATTCATGTTGCTTTGTGGGCAGGTTACAACTTACACGACAGTTTAGGAAGATTTTTCATTTTTCCATTATTTTTTTTTATGTTGGAGGTATTGTTGGTAATTTGTGGGTTCTCTTTCTCTTATTGTTTTTGTTTCATAATCAGCGTGAGAATTAACAAAATCTTGTTATTGCTTGTCAACTAGGTATGATGAGTAGAATCTGCATTAATTATTCTTTTTCCATTTGAGGCTTATGAAAAATCCACTTATCGCCTGTCCTGAATGGAGTCTCTTTTCCTTGGTCTATTGTGCTCGAAAAACTGTTTATAGCGTGTTGAAAATCATTAAAATATATGAATTTTCTTTGGAAAGATGGATGCTACCAATCCAATTCTTCAAAATCTTGCCATTACCAATTAGTCTCTTCCTAACAATCTGATATGGGTGGCTTATTGCTTATTTCCTTTTCCCTTTCAGGCTTTTTAATCTGTCTTCAGATATTTTTCAACCAGAGCAAGAATATTACCTACAGCCAGTGGAGCCTGGTCAATCCATAAATGCCACATCAATCTGCCCTGTTGATTTTTCGTTTGGGGGAGACCACTTGTGGGACAAATTTAGTGTAAGTTTATTCATTTGAAATTTGTTATATTGATTTTCAATGACTTAATATTTTCTCAGTATGGTGATGAAAACTTATCTTATTATCTTCTCTTTTTTCCTCCCCTAGATATTTACATTTAGCATTGTATTTCTCGTTGATTTCTTCCATGCTGTACCTTCACATTAATTAAAAGCTCAAACTTTTTTTTTTTATGATGTTTTATCGGTATTTTAACCTAACTTTGTGTGCTATGTCCATTTGGTCTTCCACTATGCTTTAAGCATCAGTAATATCAAGCCAGATTAAATTTTTATATCTTGCTATGCATCGACTTGCATGCATTAAAAATGTTTCAGTAAACTTCTTATTGTGTAGGATCTTAAATCTGATGTTAGTACCATTTCTCAATGCATGAAAAACTGTTAAAACGGTGTAAGAACCAACATTCAGTTATAAAAATATTGCTCACACAGTATATCTGCAGGTGTTTGTTTTATTCAGCGATGGTTCAATTTACATCCTCTGCCCTGTTATTCCATTTAAAAGGTACTCAATTTCCCACATCTCTCCCTTCTTTAATTGACTTTTGGGAATCGTGGACTATAAATGAATTATAATTACTAAAGACAGATACTTTATTCCTTTGGTTTTCATTCTTCAAATATTTAGTACCGTGAAAATAAGTGCGAGGTGAGACTCAGAGGACAATTTACCCTCATCATCTATCTATTACGAAGTCATGGAAAATGGGTCGAACATACCCTTTTAAACTCCAAATCTTCCCTGTAGCTTACTAAAAGTAACTGACAAGGACCTTATAGTTTCCTAGTAGTATAAGGCCTACAATTAATGAATAGAAATATATATACTATCTGTAACTGGTGCTTTGTCCTTGACAGCACTTACAAGTGGGAATCTATATTGGAGATTTATAACGATGCTCAGTCTTTTGGGCTAAAATCAGCCAATTCAAAAGCTATCAGTAATTCCAGTCTTGCAATCTCTTGGTTGGAAGAAACTTTTCCAAATTTAGTTCAAGCAACAGATGGAGGAGGCATGCCTGTGATTATGGCCCATCCTTGTGCTTTATTTGATGCGTCACTTGCATTGCAGGTACGAGACATTTTCAATGAATGCATTTGGTAGTTGGCAATGACCTATACATATTAGAATGTGTTAGGCTGAATATATGTTTCAGTTGCTAATGTTTGAGTAATTTTCTTTTTAAGTTCATAATGTTTAAAAATGTTCAATTTAGTCTCTAGTATTTTAACATTTTTCAATTTTACCATTCTTGTTAGTGATGTCAAAATTGACTGATAATAAACTTAAATGACATGATATTTAGTGGGTTGGCAGAAATTTAGAGGGAAAATTAAGCTGCAAGAGGAAAGTTTCAAATTTCTCATCCAAATTTTTAAGTTGACCCAATTTTGATTTTCCATCTCTTAGGTGACCCAATTTCTTATCTAAATTTATGCCAACTCACTGTCACGTAAGTTTATCATTAGCCAATTTTGACATTCATCAATGAGAAGAGTATAATTGAAAAATGTTAAAACATAGGGGACTGAATTAGAGCTTTTTAATATTAGGGATTAAGTGAAAAACGCTCGAACATTAGGAACTAAAGCACATATTTAGTCAGTGTGCTGTTATCAAATTTTTAGTGGTGTGGCATATGCATAGGTTGCAATATAAATATTCTCTCTGTACTCGGTGTTATAATCCTTAATCTTCGTACCACATGGTCTACCAGGGGCCTTTGAGGAGAGCGTGCAATAATGGAGATGAAGGAGATACATCAATTAAAGGTGCAGAATGTGAAGGCCGTGCAGTAAGTTTACTATATAATCTAATCAGCAAAGACTCAGTTCTAGTGACAGCGTGGAGTGGTGGGCAACTGCAGATAGACGCCCTTGCTGATGAAATTCAGCCTGTCTGGAATCTTGGTAGTCCCCCATGTGTACGTGTTGATGCTGATGACAACATCCTTGGTCTTGCTATGATATGTGAATTGATCACAGGGAAGCTCTCCAAGGTGAAGCTTGATCAACCACTTGATCATACAGTTTGGTCGGGGCACCCTCCCCCTTTGTTGAGGCTGGCTATTGTCGATCTGGCCCTTCCGAAGAAAATGGAGAGAGATTCTCTTATCACGATGTTCGTCGATAAACTCATGGACGAAAGAATTTATGCTCTTCACAGTGGAGGCATAGACTCGATTATACTGCATTTTCTCCCATTCACAAGTCAAAGCCGAGGACAGGACCAGACCATGAGAACTCCCTCTGTGCACCCTGTTCTGAATACCTGCCAGGGAGACACTTCCGACCCATTTCCGCTTTGTGGTTTTGCCTCATTGTCCGACTCATTCGGATATTCCTGGATTGTGGGAGTCACCATTTCTCAAGAATGCGTTGTTCTAGAGATGAAGACTTGGAACCTTCAAGTCCCAATTCAGGTTAACAATTTCCTAAACGGGGGAAAATCAGTCACGACTGAAGAAAAAAATGAAAGTGAGAGATCTAAAATCATAAGCAAAGATCTTCTCAGCGGACCTAAGGTGGTTCTCCTTCCTCAGTCCTCATCAAATATGCGTTCCGTGACGGCTGATTCCATCGAAGGTCGGTCCATGCTTCATCAATACTTCAAGCTCTTCCATGAAAATTATGTGGAGTATGCACATACGGTAATTGAAAACTAGTAGTTAAAAGTTCGGCAGCTAATTTAGACAATTTAGTTAGTCTAAACTCACCCCTCCTTCCTCCCTTCCTCCCTTCCTCTCCCCCCTCTAGGTGTACTATGGGCTAAAGCATCAGGGGCCCAAGTTGAAGAGGTTAATTGACGATCAGCATGCTCATTTAAAAGAGGCACAGCAAAAGCTCTTAAAAGTAGAGGGGAAACAGCAATTATTGGAGGACAGGATAGAACGTGCAATCAAACTGCACAATGATCTGGAAGAGCGCTTACATCGGTTGAAGAACTTGCCAGGAGCTCACAAAAGGCCATTGTCCAAAGCAGAAAGAGAGTTCAAATCTACACTTGGTAATAAATTCTCAGATAAAGTTCTTAAATTTGTTTGCTTCATCGACTGCTTGAGTAGTTAAAAGTAAATTTGGTATGACTTTTAGAATGTTGAAAAGTGCTTTTAGCCGATTAAAACTACTTTCCAAAGTTTTCACCGTATTTGGTTACATAGCTAAAAATTTTTCAGGAAACACTTGTTTCCAATAGCAATGTTTCACTCATTTATGCAACTTCTAAAAGTCATACCGGATTTTACAGATTGAGGCTGGGCTAAATATAAAACCAGAATAATTGAATTCTTCATTTAACTTGTATTATCTATAGTATTTTCTTGGTACATGCGATCTCTCGTATGCTGTGTCTTAGAAATCACACCTTCGGAGGCCACCTCTTTGGATATTTTTCAATGTCCACATGGTTGTCTCGTAGGCTTGGTTAATTTGTGCACGAGGGAGCTCACACAGACACATGTTTTTTTGTAGAAGTAGATCCGAGTTAACCGATTTCCATTAATTTTAAAACCAAGTTATTGCTCTTCTTTTAATATTTTGCAACCCTGTCAAATATAACCCTTCATCTTAGTCCTTGTGTACTATGAAGTTAGTTTAGTAAATTGTTATTTTATGTGGATTGTAAATTATCTTCAAGTCATGTAGTCAAAGAAATTCCCAAACGTTAAGTTCACAAAGTTCATATTACAACTGCTCTGTTTAACTATGTGATACTCTGTTGTCATACAGACCACTTTGCGGGTGTTGAGTTGGATGCTTTACATACTTCGATCGACACGCTAACTGCAAGACTAAGGAGGTACACAAATTCTTCTAAGAACAACAATCTAGTAAACAACCAACAACAGAAAATGTACAGGAGAAACACTTATGTCCAAGGCTCTCAGATCTCTCAACTCAAATCATCGCTCGAGAAACTCTCCCTCCTCAATGCTGAGAACACTAAGAAGGTTAAGCTAGTTGAATCTACGATAAAAAGCAAGGAAAGGAACAGATGC

mRNA sequence

ATGAGGTACAATTTTGAGGACAACGAACCTGATTCCGGCCACCATCGATCTCCGACTCCAAAACTAGACGCCGATTGGGTCCCTCTACAAACGCACCCCATTTTCACCGCCGCCGCCTCCGATTTTGGCGGCACCGTTTCTCCGCCTCTAAGAAACCTCCTTGCGTCGGACGGCGCCTCCCGGCTCTTTTTCTGGGACTGCACCAAACTCTGCGTTCACCGGATTTCCATACGCCTCGGTGAACCCGAACCCACCTCCGTCCTCGCCGCTTCTCCTTCCAAAGTACTGCAACCGGATGTGAAACTCGACTTTGTTGTTCACAAGATTTCTATCAATAAGAATGGATCAGCATTGGCCCTTGTGGGTCCAGGTGGTTTGTTCATAATGTATCTCTATGGCCACACTTCTTCCAGAGAGAACACTCTCATCTGTAGAACTGTTAGAGTTGGTCCGCAGATCTACTACGGTGGCCACGATGTCATACGCACGCTACAAGTTTCTTGGCACCCTTATAGTGACTTCCATCTGGGAGTCCTTTCTTCTGATTCTGTTTTCAGGCTTTTTAATCTGTCTTCAGATATTTTTCAACCAGAGCAAGAATATTACCTACAGCCAGTGGAGCCTGGTCAATCCATAAATGCCACATCAATCTGCCCTGTTGATTTTTCGTTTGGGGGAGACCACTTGTGGGACAAATTTAGTGTGTTTGTTTTATTCAGCGATGGTTCAATTTACATCCTCTGCCCTGTTATTCCATTTAAAAGCACTTACAAGTGGGAATCTATATTGGAGATTTATAACGATGCTCAGTCTTTTGGGCTAAAATCAGCCAATTCAAAAGCTATCAGTAATTCCAGTCTTGCAATCTCTTGGTTGGAAGAAACTTTTCCAAATTTAGTTCAAGCAACAGATGGAGGAGGCATGCCTGTGATTATGGCCCATCCTTGTGCTTTATTTGATGCGTCACTTGCATTGCAGGGGCCTTTGAGGAGAGCGTGCAATAATGGAGATGAAGGAGATACATCAATTAAAGGTGCAGAATGTGAAGGCCGTGCAGTAAGTTTACTATATAATCTAATCAGCAAAGACTCAGTTCTAGTGACAGCGTGGAGTGGTGGGCAACTGCAGATAGACGCCCTTGCTGATGAAATTCAGCCTGTCTGGAATCTTGGTAGTCCCCCATGTGTACGTGTTGATGCTGATGACAACATCCTTGGTCTTGCTATGATATGTGAATTGATCACAGGGAAGCTCTCCAAGGTGAAGCTTGATCAACCACTTGATCATACAGTTTGGTCGGGGCACCCTCCCCCTTTGTTGAGGCTGGCTATTGTCGATCTGGCCCTTCCGAAGAAAATGGAGAGAGATTCTCTTATCACGATGTTCGTCGATAAACTCATGGACGAAAGAATTTATGCTCTTCACAGTGGAGGCATAGACTCGATTATACTGCATTTTCTCCCATTCACAAGTCAAAGCCGAGGACAGGACCAGACCATGAGAACTCCCTCTGTGCACCCTGTTCTGAATACCTGCCAGGGAGACACTTCCGACCCATTTCCGCTTTGTGGTTTTGCCTCATTGTCCGACTCATTCGGATATTCCTGGATTGTGGGAGTCACCATTTCTCAAGAATGCGTTGTTCTAGAGATGAAGACTTGGAACCTTCAAGTCCCAATTCAGGTTAACAATTTCCTAAACGGGGGAAAATCAGTCACGACTGAAGAAAAAAATGAAAGTGAGAGATCTAAAATCATAAGCAAAGATCTTCTCAGCGGACCTAAGGTGGTTCTCCTTCCTCAGTCCTCATCAAATATGCGTTCCGTGACGGCTGATTCCATCGAAGGTCGGTCCATGCTTCATCAATACTTCAAGCTCTTCCATGAAAATTATGTGGAGTATGCACATACGGTGTACTATGGGCTAAAGCATCAGGGGCCCAAGTTGAAGAGGTTAATTGACGATCAGCATGCTCATTTAAAAGAGGCACAGCAAAAGCTCTTAAAAGTAGAGGGGAAACAGCAATTATTGGAGGACAGGATAGAACGTGCAATCAAACTGCACAATGATCTGGAAGAGCGCTTACATCGGTTGAAGAACTTGCCAGGAGCTCACAAAAGGCCATTGTCCAAAGCAGAAAGAGAGTTCAAATCTACACTTGACCACTTTGCGGGTGTTGAGTTGGATGCTTTACATACTTCGATCGACACGCTAACTGCAAGACTAAGGAGGTACACAAATTCTTCTAAGAACAACAATCTAGTAAACAACCAACAACAGAAAATGTACAGGAGAAACACTTATGTCCAAGGCTCTCAGATCTCTCAACTCAAATCATCGCTCGAGAAACTCTCCCTCCTCAATGCTGAGAACACTAAGAAGGTTAAGCTAGTTGAATCTACGATAAAAAGCAAGGAAAGGAACAGATGC

Coding sequence (CDS)

ATGAGGTACAATTTTGAGGACAACGAACCTGATTCCGGCCACCATCGATCTCCGACTCCAAAACTAGACGCCGATTGGGTCCCTCTACAAACGCACCCCATTTTCACCGCCGCCGCCTCCGATTTTGGCGGCACCGTTTCTCCGCCTCTAAGAAACCTCCTTGCGTCGGACGGCGCCTCCCGGCTCTTTTTCTGGGACTGCACCAAACTCTGCGTTCACCGGATTTCCATACGCCTCGGTGAACCCGAACCCACCTCCGTCCTCGCCGCTTCTCCTTCCAAAGTACTGCAACCGGATGTGAAACTCGACTTTGTTGTTCACAAGATTTCTATCAATAAGAATGGATCAGCATTGGCCCTTGTGGGTCCAGGTGGTTTGTTCATAATGTATCTCTATGGCCACACTTCTTCCAGAGAGAACACTCTCATCTGTAGAACTGTTAGAGTTGGTCCGCAGATCTACTACGGTGGCCACGATGTCATACGCACGCTACAAGTTTCTTGGCACCCTTATAGTGACTTCCATCTGGGAGTCCTTTCTTCTGATTCTGTTTTCAGGCTTTTTAATCTGTCTTCAGATATTTTTCAACCAGAGCAAGAATATTACCTACAGCCAGTGGAGCCTGGTCAATCCATAAATGCCACATCAATCTGCCCTGTTGATTTTTCGTTTGGGGGAGACCACTTGTGGGACAAATTTAGTGTGTTTGTTTTATTCAGCGATGGTTCAATTTACATCCTCTGCCCTGTTATTCCATTTAAAAGCACTTACAAGTGGGAATCTATATTGGAGATTTATAACGATGCTCAGTCTTTTGGGCTAAAATCAGCCAATTCAAAAGCTATCAGTAATTCCAGTCTTGCAATCTCTTGGTTGGAAGAAACTTTTCCAAATTTAGTTCAAGCAACAGATGGAGGAGGCATGCCTGTGATTATGGCCCATCCTTGTGCTTTATTTGATGCGTCACTTGCATTGCAGGGGCCTTTGAGGAGAGCGTGCAATAATGGAGATGAAGGAGATACATCAATTAAAGGTGCAGAATGTGAAGGCCGTGCAGTAAGTTTACTATATAATCTAATCAGCAAAGACTCAGTTCTAGTGACAGCGTGGAGTGGTGGGCAACTGCAGATAGACGCCCTTGCTGATGAAATTCAGCCTGTCTGGAATCTTGGTAGTCCCCCATGTGTACGTGTTGATGCTGATGACAACATCCTTGGTCTTGCTATGATATGTGAATTGATCACAGGGAAGCTCTCCAAGGTGAAGCTTGATCAACCACTTGATCATACAGTTTGGTCGGGGCACCCTCCCCCTTTGTTGAGGCTGGCTATTGTCGATCTGGCCCTTCCGAAGAAAATGGAGAGAGATTCTCTTATCACGATGTTCGTCGATAAACTCATGGACGAAAGAATTTATGCTCTTCACAGTGGAGGCATAGACTCGATTATACTGCATTTTCTCCCATTCACAAGTCAAAGCCGAGGACAGGACCAGACCATGAGAACTCCCTCTGTGCACCCTGTTCTGAATACCTGCCAGGGAGACACTTCCGACCCATTTCCGCTTTGTGGTTTTGCCTCATTGTCCGACTCATTCGGATATTCCTGGATTGTGGGAGTCACCATTTCTCAAGAATGCGTTGTTCTAGAGATGAAGACTTGGAACCTTCAAGTCCCAATTCAGGTTAACAATTTCCTAAACGGGGGAAAATCAGTCACGACTGAAGAAAAAAATGAAAGTGAGAGATCTAAAATCATAAGCAAAGATCTTCTCAGCGGACCTAAGGTGGTTCTCCTTCCTCAGTCCTCATCAAATATGCGTTCCGTGACGGCTGATTCCATCGAAGGTCGGTCCATGCTTCATCAATACTTCAAGCTCTTCCATGAAAATTATGTGGAGTATGCACATACGGTGTACTATGGGCTAAAGCATCAGGGGCCCAAGTTGAAGAGGTTAATTGACGATCAGCATGCTCATTTAAAAGAGGCACAGCAAAAGCTCTTAAAAGTAGAGGGGAAACAGCAATTATTGGAGGACAGGATAGAACGTGCAATCAAACTGCACAATGATCTGGAAGAGCGCTTACATCGGTTGAAGAACTTGCCAGGAGCTCACAAAAGGCCATTGTCCAAAGCAGAAAGAGAGTTCAAATCTACACTTGACCACTTTGCGGGTGTTGAGTTGGATGCTTTACATACTTCGATCGACACGCTAACTGCAAGACTAAGGAGGTACACAAATTCTTCTAAGAACAACAATCTAGTAAACAACCAACAACAGAAAATGTACAGGAGAAACACTTATGTCCAAGGCTCTCAGATCTCTCAACTCAAATCATCGCTCGAGAAACTCTCCCTCCTCAATGCTGAGAACACTAAGAAGGTTAAGCTAGTTGAATCTACGATAAAAAGCAAGGAAAGGAACAGATGC

Protein sequence

MRYNFEDNEPDSGHHRSPTPKLDADWVPLQTHPIFTAAASDFGGTVSPPLRNLLASDGASRLFFWDCTKLCVHRISIRLGEPEPTSVLAASPSKVLQPDVKLDFVVHKISINKNGSALALVGPGGLFIMYLYGHTSSRENTLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVLSSDSVFRLFNLSSDIFQPEQEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLFSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLAISWLEETFPNLVQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPCVRVDADDNILGLAMICELITGKLSKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLITMFVDKLMDERIYALHSGGIDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIVGVTISQECVVLEMKTWNLQVPIQVNNFLNGGKSVTTEEKNESERSKIISKDLLSGPKVVLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAHLKEAQQKLLKVEGKQQLLEDRIERAIKLHNDLEERLHRLKNLPGAHKRPLSKAEREFKSTLDHFAGVELDALHTSIDTLTARLRRYTNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKSSLEKLSLLNAENTKKVKLVESTIKSKERNRC
Homology
[Close]
BLAST of MS017196 vs. NCBI nr
Match: XP_022156891.1 (nuclear pore complex protein NUP88 [Momordica charantia])

HSP 1 Score: 1599.3 bits (4140), Expect = 0.0e+00
Identity = 798/811 (98.40%), Postives = 804/811 (99.14%), Query Frame = 0 

Query: 1   MRYNFEDNEPDSGHHRSPTPKLDADWVPLQTHPIFT-AAASDFGGTVSPPLRNLLASDGA 60
           MRYNF+DNEPDSGHHRSPTPKLDADWVPLQTHP+FT AAA+DFGGTVSPPLRNLLASDGA
Sbjct: 1   MRYNFDDNEPDSGHHRSPTPKLDADWVPLQTHPVFTAAAAADFGGTVSPPLRNLLASDGA 60

Query: 61  SRLFFWDCTKLCVHRISIRLGEPEPTSVLAASPSKVLQPDVKLDFVVHKISINKNGSALA 120
           SRLFFWDCT LCVHRISIRLGEPEPTSVLAASPSKVLQPDVKLDFVVHKISINKNGSALA
Sbjct: 61  SRLFFWDCTILCVHRISIRLGEPEPTSVLAASPSKVLQPDVKLDFVVHKISINKNGSALA 120

Query: 121 LVGPGGLFIMYLYGHTSSRENTLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVL 180
           LVGPGGLFIMYLYGHTSSRENTLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVL
Sbjct: 121 LVGPGGLFIMYLYGHTSSRENTLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVL 180

Query: 181 SSDSVFRLFNLSSDIFQPEQEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLF 240
           SSDSVFRLFNLSSDI QPEQEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLF
Sbjct: 181 SSDSVFRLFNLSSDILQPEQEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLF 240

Query: 241 SDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLAISWLEETFPNL 300
           SDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSL ISWLEETFPNL
Sbjct: 241 SDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLPISWLEETFPNL 300

Query: 301 VQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNL 360
           VQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNL
Sbjct: 301 VQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNL 360

Query: 361 ISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPCVRVDADDNILGLAMICELITGKLS 420
           ISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPP VRVDADDNILGLAMICELITGKLS
Sbjct: 361 ISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVRVDADDNILGLAMICELITGKLS 420

Query: 421 KVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLITMFVDKLMDERIYALHSGGI 480
           KVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSL+TMFVDKLMDERIYALHSGGI
Sbjct: 421 KVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLVTMFVDKLMDERIYALHSGGI 480

Query: 481 DSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIVG 540
           DSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIVG
Sbjct: 481 DSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIVG 540

Query: 541 VTISQECVVLEMKTWNLQVPIQVNNFLNGGKSVTTEEKNESERSKIISKDLLSGPKVVLL 600
           VTISQECVVLEMKTWNLQVPIQVNNFLNGGKSV TEEKNESERSKIISKDLLSGPKVVLL
Sbjct: 541 VTISQECVVLEMKTWNLQVPIQVNNFLNGGKSVMTEEKNESERSKIISKDLLSGPKVVLL 600

Query: 601 PQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAH 660
           PQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAH
Sbjct: 601 PQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAH 660

Query: 661 LKEAQQKLLKVEGKQQLLEDRIERAIKLHNDLEERLHRLKNLPGAHKRPLSKAEREFKST 720
           LKEAQ+KLLKVEGKQQLLEDRIERAIKLHNDLEERLHRLKNLPGAHKRPLSKAEREFKST
Sbjct: 661 LKEAQKKLLKVEGKQQLLEDRIERAIKLHNDLEERLHRLKNLPGAHKRPLSKAEREFKST 720

Query: 721 LDHFAGVELDALHTSIDTLTARLRRYTNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKS 780
           LDHFAGVELDALHTSIDTLTARLRRY NSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKS
Sbjct: 721 LDHFAGVELDALHTSIDTLTARLRRYPNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKS 780

Query: 781 SLEKLSLLNAENTKKVKLVESTIKSKERNRC 811
           SL+KLSLLNAENTKKVKLVESTIKSKERNRC
Sbjct: 781 SLKKLSLLNAENTKKVKLVESTIKSKERNRC 811

[Close]
BLAST of MS017196 vs. NCBI nr
Match: XP_022995007.1 (nuclear pore complex protein NUP88-like [Cucurbita maxima])

HSP 1 Score: 1410.2 bits (3649), Expect = 0.0e+00
Identity = 715/814 (87.84%), Postives = 758/814 (93.12%), Query Frame = 0 

Query: 1   MRYNFEDNEPDSGHHRSPTPKLDADWVPLQTHPIFTAA-ASDFGGTVSPPLRNLLASDGA 60
           MRYN + NE DS   RS TPKLD DWVPL+THP+FTAA A D+G +VSPPLR+LL SDGA
Sbjct: 1   MRYNLDLNEADSEPRRSLTPKLDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA 60

Query: 61  SRLFFWDCTKLCVHRISIRLGEPEPTSVLAASPSKVLQPDVKLDFVVHKISINKNGSALA 120
           SRL+FWD TKLC+HRISIRLGEPEPTSVLAASPSKVLQP+V LDF+VHKISINKNGSA+A
Sbjct: 61  SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPNVPLDFMVHKISINKNGSAIA 120

Query: 121 LVGPGGLFIMYLYGHTSSRE-NTLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGV 180
           LVGPGGL+IMYLYGH+S+R+ +T+ICRTVRVGPQIYYG HDVIRTLQVSWHPYS+FHLGV
Sbjct: 121 LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV 180

Query: 181 LSSDSVFRLFNLSSDIFQPEQEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVL 240
           LSSDSVFRLFNLSSD  QPEQEYYLQPVEPGQS NA+SICPVDFSFGGDHLWDKFSVF+L
Sbjct: 181 LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFIL 240

Query: 241 FSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLAISWLEETFPN 300
           FSDGSIYILCPV+PF+STYK ESILEIYNDAQSFGLKSAN  A+SNSSLAISWLEETFPN
Sbjct: 241 FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 300

Query: 301 LVQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYN 360
           LVQATDGG M VI+AHPCALFDASLALQGPLRRACNNG+EGD SIKGAECEGRAVSLLY 
Sbjct: 301 LVQATDGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 360

Query: 361 LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPCVRVDADDNILGLAMICELITGKL 420
           LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPP V VD +DNILG AMICELITGKL
Sbjct: 361 LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICELITGKL 420

Query: 421 SKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLITMFVDKLMDERIYALHSGG 480
           S+VKLDQPLD+TVW G PPPLLRLAIVDLALPKKMER SLI MFVDKLMDERIYALH+GG
Sbjct: 421 SEVKLDQPLDYTVWLGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 480

Query: 481 IDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIV 540
           IDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTS+PFPLCGFASLSDSFGYSWIV
Sbjct: 481 IDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV 540

Query: 541 GVTISQECVVLEMKTWNLQVPIQVNNFLNGGK--SVTTEEKNESERSKIISKDLLSGPKV 600
           GVTISQEC+VLEMKTWNLQVP+Q +NFLN GK  +  T EKNESERS+IISK+LLSGPKV
Sbjct: 541 GVTISQECIVLEMKTWNLQVPVQFSNFLNEGKLAATATGEKNESERSEIISKNLLSGPKV 600

Query: 601 VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQ 660
           VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYY LK  GP+LKRLIDDQ
Sbjct: 601 VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ 660

Query: 661 HAHLKEAQQKLLKVEGKQQLLEDRIERAIKLHNDLEERLHRLKNLPGAHKRPLSKAEREF 720
              L+EAQQKLLKV GKQ+LLEDRIE AIKLHN LEER+HRLKNLPGAHKRPLSKAEREF
Sbjct: 661 QTRLREAQQKLLKVGGKQELLEDRIESAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF 720

Query: 721 KSTLDHFAGVELDALHTSIDTLTARLRRYTNSSKNNNLVNNQQQKMYRRNTYVQGSQISQ 780
           KSTLDHF GVE+DALHTSIDTLTARLRRYTNSSKNNNLV NQQ K++RRNT VQGSQISQ
Sbjct: 721 KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLV-NQQHKIHRRNTCVQGSQISQ 780

Query: 781 LKSSLEKLSLLNAENTKKVKLVESTIKSKERNRC 811
           LKSSLEKLSLLNAEN KKVKLVESTIKSKE NRC
Sbjct: 781 LKSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 813

[Close]
BLAST of MS017196 vs. NCBI nr
Match: XP_023518771.1 (nuclear pore complex protein NUP88-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1406.3 bits (3639), Expect = 0.0e+00
Identity = 715/814 (87.84%), Postives = 758/814 (93.12%), Query Frame = 0 

Query: 1   MRYNFEDNEPDSGHHRSPTPKLDADWVPLQTHPIFTAA-ASDFGGTVSPPLRNLLASDGA 60
           MRYN + NE DS   RS TPKLD DWVPL+THP+FTAA A D+  +VSPPLR+LL SDGA
Sbjct: 1   MRYNVDLNEADSEPRRSLTPKLDVDWVPLKTHPVFTAATAVDYDDSVSPPLRSLLVSDGA 60

Query: 61  SRLFFWDCTKLCVHRISIRLGEPEPTSVLAASPSKVLQPDVKLDFVVHKISINKNGSALA 120
           SRL+FWD TKLC+HRISIRLGEPEPTSVLAASPSKVLQPDV LDFVVHKISINKNGSA+A
Sbjct: 61  SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVPLDFVVHKISINKNGSAIA 120

Query: 121 LVGPGGLFIMYLYGHTSSRE-NTLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGV 180
           LVGPGGL+IMYLYGH+S+R+ +T+ICRTVRVGPQIY G HDVIRTLQVSWHPYS+FHLGV
Sbjct: 121 LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYNGDHDVIRTLQVSWHPYSNFHLGV 180

Query: 181 LSSDSVFRLFNLSSDIFQPEQEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVL 240
           LSSDSVFRLFNLS+D  QPEQEYYLQPVEPGQS NA+SICPVDFSFGGDHLWDKFSVFVL
Sbjct: 181 LSSDSVFRLFNLSADGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFVL 240

Query: 241 FSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLAISWLEETFPN 300
           FSDGSIYILCPV+PF+STYK ESILEIYNDAQSFGLKSAN  A+SNSSLAISWLEETFPN
Sbjct: 241 FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 300

Query: 301 LVQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYN 360
           LVQATDGG M VI+AHPCALFDASLALQGPLRRACNNG+EGD SIKGAECEGRAVSLLY 
Sbjct: 301 LVQATDGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 360

Query: 361 LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPCVRVDADDNILGLAMICELITGKL 420
           LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPP V VD +DNILG AMICELITGKL
Sbjct: 361 LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICELITGKL 420

Query: 421 SKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLITMFVDKLMDERIYALHSGG 480
           S+VKLDQPLD+TVW G PPPLLRLAIVDLALPKKMER SLI MFVDKLMDERIYALH+GG
Sbjct: 421 SEVKLDQPLDYTVWLGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 480

Query: 481 IDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIV 540
           IDSIILHFLPFTSQSRGQDQTM+TPSVHPVLNTCQGDTS+PFPLCGFASLSDSFGYSWIV
Sbjct: 481 IDSIILHFLPFTSQSRGQDQTMKTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV 540

Query: 541 GVTISQECVVLEMKTWNLQVPIQVNNFLNGGK--SVTTEEKNESERSKIISKDLLSGPKV 600
           GVTISQEC+VLEMKTWNLQVP+Q +NFLN GK  +  T EKNESERS+IISK+LLSGPKV
Sbjct: 541 GVTISQECIVLEMKTWNLQVPVQFSNFLNEGKLAATATGEKNESERSEIISKNLLSGPKV 600

Query: 601 VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQ 660
           VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYY LK  GP+LKRLIDDQ
Sbjct: 601 VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ 660

Query: 661 HAHLKEAQQKLLKVEGKQQLLEDRIERAIKLHNDLEERLHRLKNLPGAHKRPLSKAEREF 720
            A L+EAQQKLLKV GKQ+LLEDRIERAIKLHN LEER++RLKNLPGAHKRPLSKAEREF
Sbjct: 661 QARLREAQQKLLKVGGKQELLEDRIERAIKLHNVLEERIYRLKNLPGAHKRPLSKAEREF 720

Query: 721 KSTLDHFAGVELDALHTSIDTLTARLRRYTNSSKNNNLVNNQQQKMYRRNTYVQGSQISQ 780
           KSTLDHF GVE+DALHTSIDTLTARLRRYTNSSKNNNLV NQQ K++RRNT VQGSQISQ
Sbjct: 721 KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLV-NQQHKIHRRNTCVQGSQISQ 780

Query: 781 LKSSLEKLSLLNAENTKKVKLVESTIKSKERNRC 811
           LKSSLEKLSLLNAEN KKVKLVESTIKSKE NRC
Sbjct: 781 LKSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 813

[Close]
BLAST of MS017196 vs. NCBI nr
Match: XP_022943164.1 (nuclear pore complex protein NUP88-like [Cucurbita moschata])

HSP 1 Score: 1405.6 bits (3637), Expect = 0.0e+00
Identity = 714/814 (87.71%), Postives = 755/814 (92.75%), Query Frame = 0 

Query: 1   MRYNFEDNEPDSGHHRSPTPKLDADWVPLQTHPIFTAA-ASDFGGTVSPPLRNLLASDGA 60
           MRYN + NE DS   RS TPK D DWVPL+THP+FTAA A D+G +VSPPLR+LL SDGA
Sbjct: 1   MRYNLDLNEADSEPRRSLTPKRDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA 60

Query: 61  SRLFFWDCTKLCVHRISIRLGEPEPTSVLAASPSKVLQPDVKLDFVVHKISINKNGSALA 120
           SRL+FWD TKLC+HRISIRLGEPEPTSVLAASPSKVLQPDV LDFVVHKISINKNGSA+A
Sbjct: 61  SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVPLDFVVHKISINKNGSAIA 120

Query: 121 LVGPGGLFIMYLYGHTSSRE-NTLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGV 180
           LVGPGGL+IMYLYGH+S+R+ +T+ICRTVRVGPQIYYG HDVIRTLQVSWHPYS+FHLGV
Sbjct: 121 LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV 180

Query: 181 LSSDSVFRLFNLSSDIFQPEQEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVL 240
           LSSDSVFRLFNLSSD  QPEQEYYLQPVEPGQS NA+SICPVDFSFGGDHLWDKFSVFVL
Sbjct: 181 LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFVL 240

Query: 241 FSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLAISWLEETFPN 300
           FSDGSIYILCPV+PF+STYK ESILEIYNDAQSFGLKSAN  A+SNSSLAISWLEETFPN
Sbjct: 241 FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 300

Query: 301 LVQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYN 360
           LVQAT GG M VI+AHPCALFDASLALQGPLRRACNNG+EGD SIKGAECEGRAVSLLY 
Sbjct: 301 LVQATSGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 360

Query: 361 LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPCVRVDADDNILGLAMICELITGKL 420
           LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPP V VD +DNILG AMICE ITGKL
Sbjct: 361 LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICEPITGKL 420

Query: 421 SKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLITMFVDKLMDERIYALHSGG 480
           S+VKLDQPLD+TVW G PPPLLRLAIVDLALPKKMER SLI MFVDKLMDERIYALH+GG
Sbjct: 421 SEVKLDQPLDYTVWMGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 480

Query: 481 IDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIV 540
           IDSIILHFLPFTSQSRGQDQTM+TPSVHPVLNTCQGDTS+PFPLCGFASLSDSFGYSWIV
Sbjct: 481 IDSIILHFLPFTSQSRGQDQTMKTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV 540

Query: 541 GVTISQECVVLEMKTWNLQVPIQVNNFLNGGK--SVTTEEKNESERSKIISKDLLSGPKV 600
           GVTISQEC+VLEMKTWNLQVP+Q +NFLN  K  +  T EKNESERS+IISK+LLSGPKV
Sbjct: 541 GVTISQECIVLEMKTWNLQVPVQFSNFLNEEKLAATATGEKNESERSEIISKNLLSGPKV 600

Query: 601 VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQ 660
           VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYY LK  GP+LKRLIDDQ
Sbjct: 601 VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ 660

Query: 661 HAHLKEAQQKLLKVEGKQQLLEDRIERAIKLHNDLEERLHRLKNLPGAHKRPLSKAEREF 720
              L+EAQQKLLKV GKQ+LLEDRIERAIKLHN LEER+HRLKNLPGAHKRPLSKAEREF
Sbjct: 661 QTRLREAQQKLLKVRGKQELLEDRIERAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF 720

Query: 721 KSTLDHFAGVELDALHTSIDTLTARLRRYTNSSKNNNLVNNQQQKMYRRNTYVQGSQISQ 780
           KSTLDHF GVE+DALHTSIDTLTARLRRYTNSSKNNNLV NQQ K++RRNT VQGSQISQ
Sbjct: 721 KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLV-NQQHKIHRRNTCVQGSQISQ 780

Query: 781 LKSSLEKLSLLNAENTKKVKLVESTIKSKERNRC 811
           LKSSLEKLSLLNAEN KKVKLVESTIKSKE NRC
Sbjct: 781 LKSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 813

[Close]
BLAST of MS017196 vs. NCBI nr
Match: KAG6600003.1 (Nuclear pore complex protein NUP88, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030676.1 Nuclear pore complex protein NUP88 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1404.4 bits (3634), Expect = 0.0e+00
Identity = 714/814 (87.71%), Postives = 755/814 (92.75%), Query Frame = 0 

Query: 1   MRYNFEDNEPDSGHHRSPTPKLDADWVPLQTHPIFTAA-ASDFGGTVSPPLRNLLASDGA 60
           MRYN + NE DS   RS TPK D DWVPL+THP+FTAA A D+G +VSPPLR+LL SDGA
Sbjct: 1   MRYNLDLNEADSEPRRSLTPKRDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA 60

Query: 61  SRLFFWDCTKLCVHRISIRLGEPEPTSVLAASPSKVLQPDVKLDFVVHKISINKNGSALA 120
           SRL+FWD TKLC+HRISIRLGEPEPTSVLAASPSKVLQPDV LDFVVHKISINKNGSA+A
Sbjct: 61  SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVPLDFVVHKISINKNGSAIA 120

Query: 121 LVGPGGLFIMYLYGHTSSRE-NTLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGV 180
           LVGPGGL+IMYLYGH+S+R+ +T+ICRTVRVGPQIYYG HDVIRTLQVSWHPYS+FHLGV
Sbjct: 121 LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV 180

Query: 181 LSSDSVFRLFNLSSDIFQPEQEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVL 240
           LSSDSVFRLFNLSSD  QPEQEYYLQPVEPGQS NA+SICPVDFSFGGDHLWDKFSVFVL
Sbjct: 181 LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFVL 240

Query: 241 FSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLAISWLEETFPN 300
           FSDGSIYILCPV+PF+STYK ESILEIYNDAQSFGLKSAN  A+SNSSLAISWLEETFPN
Sbjct: 241 FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 300

Query: 301 LVQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYN 360
           LVQAT GG M VI+AHPCALFDASLALQGPLRRACNNG+EGD SIKGAECEGRAVSLLY 
Sbjct: 301 LVQATGGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 360

Query: 361 LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPCVRVDADDNILGLAMICELITGKL 420
           LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPP V VD +DNILG AMICE ITGKL
Sbjct: 361 LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICEPITGKL 420

Query: 421 SKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLITMFVDKLMDERIYALHSGG 480
           S+VKLDQPLD+TVW G PPPLLRLAIVDLALPKKMER SLI MFVDKLMDERIYALH+GG
Sbjct: 421 SEVKLDQPLDYTVWMGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 480

Query: 481 IDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIV 540
           IDSIILHFLPFTSQSRGQDQTM+TPSVHPVLNTCQGDTS+PFPLCGFASLSDSFGYSWIV
Sbjct: 481 IDSIILHFLPFTSQSRGQDQTMKTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV 540

Query: 541 GVTISQECVVLEMKTWNLQVPIQVNNFLNGGK--SVTTEEKNESERSKIISKDLLSGPKV 600
           GVTISQEC+VLEMKTWNLQVP+Q +NFLN  K  +  T EKNESERS+IISK+LLSGPKV
Sbjct: 541 GVTISQECIVLEMKTWNLQVPVQFSNFLNEEKLAATATGEKNESERSEIISKNLLSGPKV 600

Query: 601 VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQ 660
           VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYY LK  GP+LKRLIDDQ
Sbjct: 601 VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ 660

Query: 661 HAHLKEAQQKLLKVEGKQQLLEDRIERAIKLHNDLEERLHRLKNLPGAHKRPLSKAEREF 720
              L+EAQQKLLKV GKQ+LLEDRIERAIKLHN LEER+HRLKNLPGAHKRPLSKAEREF
Sbjct: 661 QTRLREAQQKLLKVGGKQELLEDRIERAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF 720

Query: 721 KSTLDHFAGVELDALHTSIDTLTARLRRYTNSSKNNNLVNNQQQKMYRRNTYVQGSQISQ 780
           KSTLDHF GVE+DALHTSIDTLTARLRRYTNSSKNNNLV NQQ K++RRNT VQGSQISQ
Sbjct: 721 KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLV-NQQHKIHRRNTCVQGSQISQ 780

Query: 781 LKSSLEKLSLLNAENTKKVKLVESTIKSKERNRC 811
           LKSSLEKLSLLNAEN KKVKLVESTIKSKE NRC
Sbjct: 781 LKSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 813

[Close]
BLAST of MS017196 vs. ExPASy Swiss-Prot
Match: Q9FFK6 (Nuclear pore complex protein NUP88 OS=Arabidopsis thaliana OX=3702 GN=NUP88 PE=1 SV=1)

HSP 1 Score: 924.1 bits (2387), Expect = 1.1e-267
Identity = 466/811 (57.46%), Postives = 600/811 (73.98%), Query Frame = 0 

Query: 1   MRYNFEDNEPDSGHHRSPTPKLDADWVPLQTHPIFTAAASDFGGTVSPPL--RNLLASDG 60
           M++NF + E      RSPTPK    WVPLQ+HP+F +  S         L  RN +A DG
Sbjct: 1   MKFNFNETEDAPDSRRSPTPKEPVRWVPLQSHPVFASLPSSQDEPAVSQLFPRNFMAWDG 60

Query: 61  ASRLFFWDCTKLCVHRISIRLGEPEPTSVLAASPSKVLQPDVKLDFVVHKISINKNGSAL 120
            SR+++WD  +  +HR+S+RLGEPEP+SVLAA PSKV+QPD+++ F V KISINK+GSA+
Sbjct: 61  DSRVYYWDSRRYLLHRLSLRLGEPEPSSVLAAVPSKVMQPDLQVTFSVSKISINKSGSAV 120

Query: 121 ALVGPGGLFIMYLYGHTSSRENTLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGV 180
            L G  G+ +MYL+G  S  E+ +ICR V +G +IY      I  LQ SWHP SD HLG+
Sbjct: 121 LLAGSDGICVMYLFGRASVIEDNVICRVVSIGSEIYTSSDSAITLLQASWHPDSDTHLGI 180

Query: 181 LSSDSVFRLFNLSSDIFQPEQEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVL 240
           LSSD+VFRLF+LSSD   PEQEYYLQP EPG+S  A+SI P DFSFGGDHLWD+F+VF+L
Sbjct: 181 LSSDAVFRLFDLSSDTELPEQEYYLQPGEPGRSRTASSIYPADFSFGGDHLWDRFTVFIL 240

Query: 241 FSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLAISWLEETFPN 300
           F+DGSIYILCPV+PF S YKWES++EIYNDA  +G+KS+NS A+SNSSLAI WLE TFP+
Sbjct: 241 FTDGSIYILCPVVPFGSVYKWESVMEIYNDANMYGVKSSNSLAVSNSSLAIEWLEATFPD 300

Query: 301 LV-QATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLY 360
           L  Q T G  + V+ A P AL DASLALQGPL +A +   + D +++ AEC+GRAVSLLY
Sbjct: 301 LTEQGTRGENILVVKAQPYALLDASLALQGPLYKASSGDGDEDFAVREAECKGRAVSLLY 360

Query: 361 NLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPCVRVDADDNILGLAMICELITGK 420
           NL+SKDS+LVTAWS GQLQ+DAL DEIQPVW  G+   +R+++ + I G+AMICE    +
Sbjct: 361 NLVSKDSILVTAWSAGQLQVDALVDEIQPVWISGNSSRLRMNSHNKIQGVAMICESNISE 420

Query: 421 LSKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLITMFVDKLMDERIYALHSG 480
           L     + PLDHTVW GHPPPLLRLA+VDLALPK  E  SL+T+F D L+ ERIY+LH G
Sbjct: 421 LPVATSNLPLDHTVWLGHPPPLLRLAMVDLALPKMREGGSLVTLFADSLLPERIYSLHDG 480

Query: 481 GIDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWI 540
           GIDS +LH LPFTSQ+ G+D+ ++TPSVH VL+TCQ + S   PL GF  LSDSFGYSWI
Sbjct: 481 GIDSTVLHSLPFTSQASGKDEALKTPSVHTVLSTCQ-EESAVSPLLGFVPLSDSFGYSWI 540

Query: 541 VGVTISQECVVLEMKTWNLQVPIQVNNFLNGGKSVTTE--EKNESERSKIISKDLLSGPK 600
           V V  S EC+V EMKTW+L +PI V+      K+V++   EK E E S IISK+LL+GPK
Sbjct: 541 VAVLSSGECIVAEMKTWDLLLPIHVST----DKTVSSSAIEKKEQENSCIISKELLAGPK 600

Query: 601 VVLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDD 660
           + + P +  N RS  A+S+EGRS+L  Y KLFHENY+EYAH V++ L+H  P LKR+IDD
Sbjct: 601 IRIAPHALPNQRSTPANSVEGRSILLDYVKLFHENYIEYAHKVHFELQHHAPNLKRIIDD 660

Query: 661 QHAHLKEAQQKLLKVEGKQQLLEDRIERAIKLHNDLEERLHRLKNLPGAHKRPLSKAERE 720
           QH  L EA +K+ KVE  Q  LE RI++AI+ H+ LE+ L RL++LPG HK+PL++AE +
Sbjct: 661 QHQRLAEANEKISKVEKNQSFLEKRIDKAIERHDSLEQCLQRLRSLPGTHKKPLTRAELD 720

Query: 721 FKSTLDHFAGVELDALHTSIDTLTARLRRYTNSSKNNNLVNNQQQKMYRRNTYVQGSQIS 780
           FKS LD +AGVE+DAL +SI+TL AR+++ T  S    +V   Q+K Y +   +Q +Q+S
Sbjct: 721 FKSELDQYAGVEVDALQSSIETLRARVKKSTQKSHKGTVVAASQKKQYSKKNLIQDTQMS 780

Query: 781 QLKSSLEKLSLLNAENTKKVKLVESTIKSKE 807
           QL+S+L KLSL+N++N+KKVK+VES +KS+E
Sbjct: 781 QLQSTLAKLSLMNSDNSKKVKIVESALKSQE 806

[Close]
BLAST of MS017196 vs. ExPASy TrEMBL
Match: A0A6J1DWB9 (nuclear pore complex protein NUP88 OS=Momordica charantia OX=3673 GN=LOC111023727 PE=4 SV=1)

HSP 1 Score: 1599.3 bits (4140), Expect = 0.0e+00
Identity = 798/811 (98.40%), Postives = 804/811 (99.14%), Query Frame = 0 

Query: 1   MRYNFEDNEPDSGHHRSPTPKLDADWVPLQTHPIFT-AAASDFGGTVSPPLRNLLASDGA 60
           MRYNF+DNEPDSGHHRSPTPKLDADWVPLQTHP+FT AAA+DFGGTVSPPLRNLLASDGA
Sbjct: 1   MRYNFDDNEPDSGHHRSPTPKLDADWVPLQTHPVFTAAAAADFGGTVSPPLRNLLASDGA 60

Query: 61  SRLFFWDCTKLCVHRISIRLGEPEPTSVLAASPSKVLQPDVKLDFVVHKISINKNGSALA 120
           SRLFFWDCT LCVHRISIRLGEPEPTSVLAASPSKVLQPDVKLDFVVHKISINKNGSALA
Sbjct: 61  SRLFFWDCTILCVHRISIRLGEPEPTSVLAASPSKVLQPDVKLDFVVHKISINKNGSALA 120

Query: 121 LVGPGGLFIMYLYGHTSSRENTLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVL 180
           LVGPGGLFIMYLYGHTSSRENTLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVL
Sbjct: 121 LVGPGGLFIMYLYGHTSSRENTLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVL 180

Query: 181 SSDSVFRLFNLSSDIFQPEQEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLF 240
           SSDSVFRLFNLSSDI QPEQEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLF
Sbjct: 181 SSDSVFRLFNLSSDILQPEQEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLF 240

Query: 241 SDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLAISWLEETFPNL 300
           SDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSL ISWLEETFPNL
Sbjct: 241 SDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLPISWLEETFPNL 300

Query: 301 VQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNL 360
           VQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNL
Sbjct: 301 VQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNL 360

Query: 361 ISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPCVRVDADDNILGLAMICELITGKLS 420
           ISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPP VRVDADDNILGLAMICELITGKLS
Sbjct: 361 ISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVRVDADDNILGLAMICELITGKLS 420

Query: 421 KVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLITMFVDKLMDERIYALHSGGI 480
           KVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSL+TMFVDKLMDERIYALHSGGI
Sbjct: 421 KVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLVTMFVDKLMDERIYALHSGGI 480

Query: 481 DSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIVG 540
           DSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIVG
Sbjct: 481 DSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIVG 540

Query: 541 VTISQECVVLEMKTWNLQVPIQVNNFLNGGKSVTTEEKNESERSKIISKDLLSGPKVVLL 600
           VTISQECVVLEMKTWNLQVPIQVNNFLNGGKSV TEEKNESERSKIISKDLLSGPKVVLL
Sbjct: 541 VTISQECVVLEMKTWNLQVPIQVNNFLNGGKSVMTEEKNESERSKIISKDLLSGPKVVLL 600

Query: 601 PQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAH 660
           PQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAH
Sbjct: 601 PQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQHAH 660

Query: 661 LKEAQQKLLKVEGKQQLLEDRIERAIKLHNDLEERLHRLKNLPGAHKRPLSKAEREFKST 720
           LKEAQ+KLLKVEGKQQLLEDRIERAIKLHNDLEERLHRLKNLPGAHKRPLSKAEREFKST
Sbjct: 661 LKEAQKKLLKVEGKQQLLEDRIERAIKLHNDLEERLHRLKNLPGAHKRPLSKAEREFKST 720

Query: 721 LDHFAGVELDALHTSIDTLTARLRRYTNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKS 780
           LDHFAGVELDALHTSIDTLTARLRRY NSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKS
Sbjct: 721 LDHFAGVELDALHTSIDTLTARLRRYPNSSKNNNLVNNQQQKMYRRNTYVQGSQISQLKS 780

Query: 781 SLEKLSLLNAENTKKVKLVESTIKSKERNRC 811
           SL+KLSLLNAENTKKVKLVESTIKSKERNRC
Sbjct: 781 SLKKLSLLNAENTKKVKLVESTIKSKERNRC 811

[Close]
BLAST of MS017196 vs. ExPASy TrEMBL
Match: A0A6J1JXJ0 (nuclear pore complex protein NUP88-like OS=Cucurbita maxima OX=3661 GN=LOC111490688 PE=4 SV=1)

HSP 1 Score: 1410.2 bits (3649), Expect = 0.0e+00
Identity = 715/814 (87.84%), Postives = 758/814 (93.12%), Query Frame = 0 

Query: 1   MRYNFEDNEPDSGHHRSPTPKLDADWVPLQTHPIFTAA-ASDFGGTVSPPLRNLLASDGA 60
           MRYN + NE DS   RS TPKLD DWVPL+THP+FTAA A D+G +VSPPLR+LL SDGA
Sbjct: 1   MRYNLDLNEADSEPRRSLTPKLDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA 60

Query: 61  SRLFFWDCTKLCVHRISIRLGEPEPTSVLAASPSKVLQPDVKLDFVVHKISINKNGSALA 120
           SRL+FWD TKLC+HRISIRLGEPEPTSVLAASPSKVLQP+V LDF+VHKISINKNGSA+A
Sbjct: 61  SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPNVPLDFMVHKISINKNGSAIA 120

Query: 121 LVGPGGLFIMYLYGHTSSRE-NTLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGV 180
           LVGPGGL+IMYLYGH+S+R+ +T+ICRTVRVGPQIYYG HDVIRTLQVSWHPYS+FHLGV
Sbjct: 121 LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV 180

Query: 181 LSSDSVFRLFNLSSDIFQPEQEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVL 240
           LSSDSVFRLFNLSSD  QPEQEYYLQPVEPGQS NA+SICPVDFSFGGDHLWDKFSVF+L
Sbjct: 181 LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFIL 240

Query: 241 FSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLAISWLEETFPN 300
           FSDGSIYILCPV+PF+STYK ESILEIYNDAQSFGLKSAN  A+SNSSLAISWLEETFPN
Sbjct: 241 FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 300

Query: 301 LVQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYN 360
           LVQATDGG M VI+AHPCALFDASLALQGPLRRACNNG+EGD SIKGAECEGRAVSLLY 
Sbjct: 301 LVQATDGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 360

Query: 361 LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPCVRVDADDNILGLAMICELITGKL 420
           LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPP V VD +DNILG AMICELITGKL
Sbjct: 361 LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICELITGKL 420

Query: 421 SKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLITMFVDKLMDERIYALHSGG 480
           S+VKLDQPLD+TVW G PPPLLRLAIVDLALPKKMER SLI MFVDKLMDERIYALH+GG
Sbjct: 421 SEVKLDQPLDYTVWLGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 480

Query: 481 IDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIV 540
           IDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTS+PFPLCGFASLSDSFGYSWIV
Sbjct: 481 IDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV 540

Query: 541 GVTISQECVVLEMKTWNLQVPIQVNNFLNGGK--SVTTEEKNESERSKIISKDLLSGPKV 600
           GVTISQEC+VLEMKTWNLQVP+Q +NFLN GK  +  T EKNESERS+IISK+LLSGPKV
Sbjct: 541 GVTISQECIVLEMKTWNLQVPVQFSNFLNEGKLAATATGEKNESERSEIISKNLLSGPKV 600

Query: 601 VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQ 660
           VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYY LK  GP+LKRLIDDQ
Sbjct: 601 VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ 660

Query: 661 HAHLKEAQQKLLKVEGKQQLLEDRIERAIKLHNDLEERLHRLKNLPGAHKRPLSKAEREF 720
              L+EAQQKLLKV GKQ+LLEDRIE AIKLHN LEER+HRLKNLPGAHKRPLSKAEREF
Sbjct: 661 QTRLREAQQKLLKVGGKQELLEDRIESAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF 720

Query: 721 KSTLDHFAGVELDALHTSIDTLTARLRRYTNSSKNNNLVNNQQQKMYRRNTYVQGSQISQ 780
           KSTLDHF GVE+DALHTSIDTLTARLRRYTNSSKNNNLV NQQ K++RRNT VQGSQISQ
Sbjct: 721 KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLV-NQQHKIHRRNTCVQGSQISQ 780

Query: 781 LKSSLEKLSLLNAENTKKVKLVESTIKSKERNRC 811
           LKSSLEKLSLLNAEN KKVKLVESTIKSKE NRC
Sbjct: 781 LKSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 813

[Close]
BLAST of MS017196 vs. ExPASy TrEMBL
Match: A0A6J1FTH0 (nuclear pore complex protein NUP88-like OS=Cucurbita moschata OX=3662 GN=LOC111447977 PE=4 SV=1)

HSP 1 Score: 1405.6 bits (3637), Expect = 0.0e+00
Identity = 714/814 (87.71%), Postives = 755/814 (92.75%), Query Frame = 0 

Query: 1   MRYNFEDNEPDSGHHRSPTPKLDADWVPLQTHPIFTAA-ASDFGGTVSPPLRNLLASDGA 60
           MRYN + NE DS   RS TPK D DWVPL+THP+FTAA A D+G +VSPPLR+LL SDGA
Sbjct: 1   MRYNLDLNEADSEPRRSLTPKRDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA 60

Query: 61  SRLFFWDCTKLCVHRISIRLGEPEPTSVLAASPSKVLQPDVKLDFVVHKISINKNGSALA 120
           SRL+FWD TKLC+HRISIRLGEPEPTSVLAASPSKVLQPDV LDFVVHKISINKNGSA+A
Sbjct: 61  SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVPLDFVVHKISINKNGSAIA 120

Query: 121 LVGPGGLFIMYLYGHTSSRE-NTLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGV 180
           LVGPGGL+IMYLYGH+S+R+ +T+ICRTVRVGPQIYYG HDVIRTLQVSWHPYS+FHLGV
Sbjct: 121 LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV 180

Query: 181 LSSDSVFRLFNLSSDIFQPEQEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVL 240
           LSSDSVFRLFNLSSD  QPEQEYYLQPVEPGQS NA+SICPVDFSFGGDHLWDKFSVFVL
Sbjct: 181 LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFVL 240

Query: 241 FSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLAISWLEETFPN 300
           FSDGSIYILCPV+PF+STYK ESILEIYNDAQSFGLKSAN  A+SNSSLAISWLEETFPN
Sbjct: 241 FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 300

Query: 301 LVQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYN 360
           LVQAT GG M VI+AHPCALFDASLALQGPLRRACNNG+EGD SIKGAECEGRAVSLLY 
Sbjct: 301 LVQATSGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 360

Query: 361 LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPCVRVDADDNILGLAMICELITGKL 420
           LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPP V VD +DNILG AMICE ITGKL
Sbjct: 361 LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICEPITGKL 420

Query: 421 SKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLITMFVDKLMDERIYALHSGG 480
           S+VKLDQPLD+TVW G PPPLLRLAIVDLALPKKMER SLI MFVDKLMDERIYALH+GG
Sbjct: 421 SEVKLDQPLDYTVWMGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 480

Query: 481 IDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWIV 540
           IDSIILHFLPFTSQSRGQDQTM+TPSVHPVLNTCQGDTS+PFPLCGFASLSDSFGYSWIV
Sbjct: 481 IDSIILHFLPFTSQSRGQDQTMKTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV 540

Query: 541 GVTISQECVVLEMKTWNLQVPIQVNNFLNGGK--SVTTEEKNESERSKIISKDLLSGPKV 600
           GVTISQEC+VLEMKTWNLQVP+Q +NFLN  K  +  T EKNESERS+IISK+LLSGPKV
Sbjct: 541 GVTISQECIVLEMKTWNLQVPVQFSNFLNEEKLAATATGEKNESERSEIISKNLLSGPKV 600

Query: 601 VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQ 660
           VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYY LK  GP+LKRLIDDQ
Sbjct: 601 VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ 660

Query: 661 HAHLKEAQQKLLKVEGKQQLLEDRIERAIKLHNDLEERLHRLKNLPGAHKRPLSKAEREF 720
              L+EAQQKLLKV GKQ+LLEDRIERAIKLHN LEER+HRLKNLPGAHKRPLSKAEREF
Sbjct: 661 QTRLREAQQKLLKVRGKQELLEDRIERAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF 720

Query: 721 KSTLDHFAGVELDALHTSIDTLTARLRRYTNSSKNNNLVNNQQQKMYRRNTYVQGSQISQ 780
           KSTLDHF GVE+DALHTSIDTLTARLRRYTNSSKNNNLV NQQ K++RRNT VQGSQISQ
Sbjct: 721 KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLV-NQQHKIHRRNTCVQGSQISQ 780

Query: 781 LKSSLEKLSLLNAENTKKVKLVESTIKSKERNRC 811
           LKSSLEKLSLLNAEN KKVKLVESTIKSKE NRC
Sbjct: 781 LKSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 813

[Close]
BLAST of MS017196 vs. ExPASy TrEMBL
Match: A0A6J1J9F4 (nuclear pore complex protein NUP88-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484753 PE=4 SV=1)

HSP 1 Score: 1389.4 bits (3595), Expect = 0.0e+00
Identity = 699/812 (86.08%), Postives = 745/812 (91.75%), Query Frame = 0 

Query: 1   MRYNFEDNEPDSGHHRSPTPKLDADWVPLQTHPIFTAAASDFGGTVSPPLRNLLASDGAS 60
           MRYNF+ NE DS   RSP PKLD DWVPL THP+FT +A D+GG+ +PPLRNLLA DGAS
Sbjct: 1   MRYNFDLNEADSDPRRSPIPKLDVDWVPLTTHPVFTPSAVDYGGSAAPPLRNLLAWDGAS 60

Query: 61  RLFFWDCTKLCVHRISIRLGEPEPTSVLAASPSKVLQPDVKLDFVVHKISINKNGSALAL 120
           RL+FWD TKLC+HRISIRLGEPEPTSVLAASPSKVLQPDV+LDFVVHKISINKNGSALAL
Sbjct: 61  RLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVQLDFVVHKISINKNGSALAL 120

Query: 121 VGPGGLFIMYLYGHTSSR-ENTLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVL 180
           VGPGGL IM+LYGH+S+R +NT+ICR VRVGPQIYYGGHDVIR LQVSWHPYS+FHLG+L
Sbjct: 121 VGPGGLCIMHLYGHSSTRDDNTVICRIVRVGPQIYYGGHDVIRMLQVSWHPYSNFHLGIL 180

Query: 181 SSDSVFRLFNLSSDIFQPEQEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLF 240
           SSDSVFRLFNLSSDI QPEQEYYLQPVEPGQS NATSICPVDFSFGGDHLWDKFSVFVLF
Sbjct: 181 SSDSVFRLFNLSSDIVQPEQEYYLQPVEPGQSNNATSICPVDFSFGGDHLWDKFSVFVLF 240

Query: 241 SDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLAISWLEETFPNL 300
           SDGSIYILCPV+PFKS Y WESILEIYNDAQS GLKSAN  A+SNSSLAISWLEETFPNL
Sbjct: 241 SDGSIYILCPVVPFKSVYVWESILEIYNDAQSSGLKSANPTAVSNSSLAISWLEETFPNL 300

Query: 301 VQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNL 360
           V+A DGG M VI+ HPCALFDAS+ALQGPLRRACNNG+E D SIKGAECEG AVSLLYNL
Sbjct: 301 VRAPDGGDMSVIVTHPCALFDASIALQGPLRRACNNGNEEDISIKGAECEGGAVSLLYNL 360

Query: 361 ISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPCVRVDADDNILGLAMICELITGKLS 420
           ISKDSVLVTAWSGGQLQIDALADE+QPVWN+GSPP VRVD +DNILGL MICELITGKLS
Sbjct: 361 ISKDSVLVTAWSGGQLQIDALADEVQPVWNVGSPPRVRVDPNDNILGLGMICELITGKLS 420

Query: 421 KVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLITMFVDKLMDERIYALHSGGI 480
           KVKLDQPLDHTVW G PPPLLRLAIVDLALPKKMERDSLITMFVDKLMD+RI+ALH+GGI
Sbjct: 421 KVKLDQPLDHTVWLGLPPPLLRLAIVDLALPKKMERDSLITMFVDKLMDQRIFALHNGGI 480

Query: 481 DSIILHFLPFTSQSRGQDQTMRTPSVHPVLNT-CQGDTSDPFPLCGFASLSDSFGYSWIV 540
           DSIILHFLPFTSQSRGQD  MRTPSVHPVLNT CQGDTS+PFPLCGFASLSDSFGYSWIV
Sbjct: 481 DSIILHFLPFTSQSRGQDPNMRTPSVHPVLNTCCQGDTSNPFPLCGFASLSDSFGYSWIV 540

Query: 541 GVTISQECVVLEMKTWNLQVPIQVNNFLNGGKS--VTTEEKNESERSKIISKDLLSGPKV 600
           GVT SQEC+VLEM+TWNL VP+QV+NFLN G+S    T EK+ESERS+IISKDLL GPKV
Sbjct: 541 GVTFSQECIVLEMRTWNLLVPVQVSNFLNEGQSAAAVTGEKSESERSEIISKDLLGGPKV 600

Query: 601 VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQ 660
           VLLPQSSSNMRSVTADSIEG SMLHQYFKLFHENYVEYAH+VYY LK  GP+LKRL DDQ
Sbjct: 601 VLLPQSSSNMRSVTADSIEGWSMLHQYFKLFHENYVEYAHSVYYELKQHGPRLKRLNDDQ 660

Query: 661 HAHLKEAQQKLLKVEGKQQLLEDRIERAIKLHNDLEERLHRLKNLPGAHKRPLSKAEREF 720
              L+EAQQKLLKVEGKQQ L+DRIE AIKLHN LEER+HRLKNLPGAHK+PLSKAEREF
Sbjct: 661 QTRLREAQQKLLKVEGKQQALDDRIESAIKLHNVLEERIHRLKNLPGAHKKPLSKAEREF 720

Query: 721 KSTLDHFAGVELDALHTSIDTLTARLRRYTNSSKNNNLVNNQQQKMYRRNTYVQGSQISQ 780
           KSTLDHF GVELDAL  S+DT+TARLRRY NSSKNNN   NQQQKMYRR+TYVQGSQISQ
Sbjct: 721 KSTLDHFTGVELDALRISMDTVTARLRRYKNSSKNNNNGVNQQQKMYRRSTYVQGSQISQ 780

Query: 781 LKSSLEKLSLLNAENTKKVKLVESTIKSKERN 809
           LKSSLEKLSLLNA+NTKKVKLVES IKSKERN
Sbjct: 781 LKSSLEKLSLLNADNTKKVKLVESAIKSKERN 812

[Close]
BLAST of MS017196 vs. ExPASy TrEMBL
Match: A0A6J1GXA7 (nuclear pore complex protein NUP88-like OS=Cucurbita moschata OX=3662 GN=LOC111458346 PE=4 SV=1)

HSP 1 Score: 1383.6 bits (3580), Expect = 0.0e+00
Identity = 698/812 (85.96%), Postives = 745/812 (91.75%), Query Frame = 0 

Query: 1   MRYNFEDNEPDSGHHRSPTPKLDADWVPLQTHPIFTAAASDFGGTVSPPLRNLLASDGAS 60
           MRYNF+ NE DS   RS  PKLD DWVPL THP+FT +A D+GG+ +PPLRNLLA DGAS
Sbjct: 1   MRYNFDLNEADSDPRRSLIPKLDVDWVPLTTHPVFTPSAVDYGGSAAPPLRNLLAWDGAS 60

Query: 61  RLFFWDCTKLCVHRISIRLGEPEPTSVLAASPSKVLQPDVKLDFVVHKISINKNGSALAL 120
           RL+FWD TKLC+HRISIRLGEPEPTSVLAASPSKVLQPDV+LDFVVHKISINKNGSALAL
Sbjct: 61  RLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVQLDFVVHKISINKNGSALAL 120

Query: 121 VGPGGLFIMYLYGHTSSRE-NTLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGVL 180
           VGPGGL IM+LYGH+S+R+ NT+ICRTVRVGPQIYYGGHDVIRTLQVSWHPYS+FHLG+L
Sbjct: 121 VGPGGLCIMHLYGHSSTRDNNTIICRTVRVGPQIYYGGHDVIRTLQVSWHPYSNFHLGIL 180

Query: 181 SSDSVFRLFNLSSDIFQPEQEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVLF 240
           SSDSVFRLFNLSSDI QPEQEYY+QPVEPGQS NATSICPV FSFGGDHLWDKFSVFVLF
Sbjct: 181 SSDSVFRLFNLSSDIVQPEQEYYIQPVEPGQSNNATSICPVGFSFGGDHLWDKFSVFVLF 240

Query: 241 SDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLAISWLEETFPNL 300
           SDGSIYILCPV+PFKS Y WESILEIYNDAQS GLKSAN  A+SNSSLAISWLEETFPNL
Sbjct: 241 SDGSIYILCPVVPFKSVYVWESILEIYNDAQSSGLKSANPTAVSNSSLAISWLEETFPNL 300

Query: 301 VQATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLYNL 360
           V+A DGG M VI+AHPCALFDAS+ALQGPL RACNNG+E D SIKGAECEG AVSLLYNL
Sbjct: 301 VRAPDGGDMSVIVAHPCALFDASIALQGPLWRACNNGNEEDISIKGAECEGGAVSLLYNL 360

Query: 361 ISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPCVRVDADDNILGLAMICELITGKLS 420
           ISKDSVLVTAWSGGQLQIDALADE+QPVWN+GS P VRVD +DNILGL MICELITGKLS
Sbjct: 361 ISKDSVLVTAWSGGQLQIDALADEVQPVWNVGSSPRVRVDPNDNILGLGMICELITGKLS 420

Query: 421 KVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLITMFVDKLMDERIYALHSGGI 480
           KVKLDQPLDHTVW G PPPLLRLAIVDLALPKKMERDSLITMFVDKLMD+RI+ALH+GGI
Sbjct: 421 KVKLDQPLDHTVWLGLPPPLLRLAIVDLALPKKMERDSLITMFVDKLMDQRIFALHNGGI 480

Query: 481 DSIILHFLPFTSQSRGQDQTMRTPSVHPVLNT-CQGDTSDPFPLCGFASLSDSFGYSWIV 540
           DSIILHFLPFTSQSRGQD  MRTPSVH VLNT CQGDTS+PFPLCGFASLSDSFGYSWIV
Sbjct: 481 DSIILHFLPFTSQSRGQDPIMRTPSVHSVLNTCCQGDTSNPFPLCGFASLSDSFGYSWIV 540

Query: 541 GVTISQECVVLEMKTWNLQVPIQVNNFLNGGKS--VTTEEKNESERSKIISKDLLSGPKV 600
           GVT SQEC+VLEMKTWNL VP+QV+NFLN G+S    T EK+ESERS+IISKDLL GPKV
Sbjct: 541 GVTFSQECIVLEMKTWNLLVPVQVSNFLNEGQSAAAVTGEKSESERSEIISKDLLGGPKV 600

Query: 601 VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDDQ 660
           VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAH+VYY LK  GP+LKRL DDQ
Sbjct: 601 VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHSVYYELKQHGPRLKRLNDDQ 660

Query: 661 HAHLKEAQQKLLKVEGKQQLLEDRIERAIKLHNDLEERLHRLKNLPGAHKRPLSKAEREF 720
              L+EAQQKLLKVEGKQQ+L+DRIE AIKLHN LEER+HRLKNLPGAHK+PLSKAEREF
Sbjct: 661 QTRLREAQQKLLKVEGKQQVLDDRIESAIKLHNVLEERIHRLKNLPGAHKKPLSKAEREF 720

Query: 721 KSTLDHFAGVELDALHTSIDTLTARLRRYTNSSKNNNLVNNQQQKMYRRNTYVQGSQISQ 780
           KSTLDHF GVELDAL  S+DT+TARLRR+ NSSKNNN   NQQQKMYRR+TYVQGSQISQ
Sbjct: 721 KSTLDHFTGVELDALRISMDTVTARLRRFKNSSKNNNNGVNQQQKMYRRSTYVQGSQISQ 780

Query: 781 LKSSLEKLSLLNAENTKKVKLVESTIKSKERN 809
           LKSSLEKLSLLNAENTKKVKLVES IKSKERN
Sbjct: 781 LKSSLEKLSLLNAENTKKVKLVESAIKSKERN 812

[Close]
BLAST of MS017196 vs. TAIR 10
Match: AT5G05680.1 (nuclear pore complex protein-related )

HSP 1 Score: 924.1 bits (2387), Expect = 7.8e-269
Identity = 466/811 (57.46%), Postives = 600/811 (73.98%), Query Frame = 0 

Query: 1   MRYNFEDNEPDSGHHRSPTPKLDADWVPLQTHPIFTAAASDFGGTVSPPL--RNLLASDG 60
           M++NF + E      RSPTPK    WVPLQ+HP+F +  S         L  RN +A DG
Sbjct: 1   MKFNFNETEDAPDSRRSPTPKEPVRWVPLQSHPVFASLPSSQDEPAVSQLFPRNFMAWDG 60

Query: 61  ASRLFFWDCTKLCVHRISIRLGEPEPTSVLAASPSKVLQPDVKLDFVVHKISINKNGSAL 120
            SR+++WD  +  +HR+S+RLGEPEP+SVLAA PSKV+QPD+++ F V KISINK+GSA+
Sbjct: 61  DSRVYYWDSRRYLLHRLSLRLGEPEPSSVLAAVPSKVMQPDLQVTFSVSKISINKSGSAV 120

Query: 121 ALVGPGGLFIMYLYGHTSSRENTLICRTVRVGPQIYYGGHDVIRTLQVSWHPYSDFHLGV 180
            L G  G+ +MYL+G  S  E+ +ICR V +G +IY      I  LQ SWHP SD HLG+
Sbjct: 121 LLAGSDGICVMYLFGRASVIEDNVICRVVSIGSEIYTSSDSAITLLQASWHPDSDTHLGI 180

Query: 181 LSSDSVFRLFNLSSDIFQPEQEYYLQPVEPGQSINATSICPVDFSFGGDHLWDKFSVFVL 240
           LSSD+VFRLF+LSSD   PEQEYYLQP EPG+S  A+SI P DFSFGGDHLWD+F+VF+L
Sbjct: 181 LSSDAVFRLFDLSSDTELPEQEYYLQPGEPGRSRTASSIYPADFSFGGDHLWDRFTVFIL 240

Query: 241 FSDGSIYILCPVIPFKSTYKWESILEIYNDAQSFGLKSANSKAISNSSLAISWLEETFPN 300
           F+DGSIYILCPV+PF S YKWES++EIYNDA  +G+KS+NS A+SNSSLAI WLE TFP+
Sbjct: 241 FTDGSIYILCPVVPFGSVYKWESVMEIYNDANMYGVKSSNSLAVSNSSLAIEWLEATFPD 300

Query: 301 LV-QATDGGGMPVIMAHPCALFDASLALQGPLRRACNNGDEGDTSIKGAECEGRAVSLLY 360
           L  Q T G  + V+ A P AL DASLALQGPL +A +   + D +++ AEC+GRAVSLLY
Sbjct: 301 LTEQGTRGENILVVKAQPYALLDASLALQGPLYKASSGDGDEDFAVREAECKGRAVSLLY 360

Query: 361 NLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPCVRVDADDNILGLAMICELITGK 420
           NL+SKDS+LVTAWS GQLQ+DAL DEIQPVW  G+   +R+++ + I G+AMICE    +
Sbjct: 361 NLVSKDSILVTAWSAGQLQVDALVDEIQPVWISGNSSRLRMNSHNKIQGVAMICESNISE 420

Query: 421 LSKVKLDQPLDHTVWSGHPPPLLRLAIVDLALPKKMERDSLITMFVDKLMDERIYALHSG 480
           L     + PLDHTVW GHPPPLLRLA+VDLALPK  E  SL+T+F D L+ ERIY+LH G
Sbjct: 421 LPVATSNLPLDHTVWLGHPPPLLRLAMVDLALPKMREGGSLVTLFADSLLPERIYSLHDG 480

Query: 481 GIDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSDPFPLCGFASLSDSFGYSWI 540
           GIDS +LH LPFTSQ+ G+D+ ++TPSVH VL+TCQ + S   PL GF  LSDSFGYSWI
Sbjct: 481 GIDSTVLHSLPFTSQASGKDEALKTPSVHTVLSTCQ-EESAVSPLLGFVPLSDSFGYSWI 540

Query: 541 VGVTISQECVVLEMKTWNLQVPIQVNNFLNGGKSVTTE--EKNESERSKIISKDLLSGPK 600
           V V  S EC+V EMKTW+L +PI V+      K+V++   EK E E S IISK+LL+GPK
Sbjct: 541 VAVLSSGECIVAEMKTWDLLLPIHVST----DKTVSSSAIEKKEQENSCIISKELLAGPK 600

Query: 601 VVLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYGLKHQGPKLKRLIDD 660
           + + P +  N RS  A+S+EGRS+L  Y KLFHENY+EYAH V++ L+H  P LKR+IDD
Sbjct: 601 IRIAPHALPNQRSTPANSVEGRSILLDYVKLFHENYIEYAHKVHFELQHHAPNLKRIIDD 660

Query: 661 QHAHLKEAQQKLLKVEGKQQLLEDRIERAIKLHNDLEERLHRLKNLPGAHKRPLSKAERE 720
           QH  L EA +K+ KVE  Q  LE RI++AI+ H+ LE+ L RL++LPG HK+PL++AE +
Sbjct: 661 QHQRLAEANEKISKVEKNQSFLEKRIDKAIERHDSLEQCLQRLRSLPGTHKKPLTRAELD 720

Query: 721 FKSTLDHFAGVELDALHTSIDTLTARLRRYTNSSKNNNLVNNQQQKMYRRNTYVQGSQIS 780
           FKS LD +AGVE+DAL +SI+TL AR+++ T  S    +V   Q+K Y +   +Q +Q+S
Sbjct: 721 FKSELDQYAGVEVDALQSSIETLRARVKKSTQKSHKGTVVAASQKKQYSKKNLIQDTQMS 780

Query: 781 QLKSSLEKLSLLNAENTKKVKLVESTIKSKE 807
           QL+S+L KLSL+N++N+KKVK+VES +KS+E
Sbjct: 781 QLQSTLAKLSLMNSDNSKKVKIVESALKSQE 806

The following BLAST results are available for this feature:
BLAST of MS017196 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022156891.10.0e+0098.40nuclear pore complex protein NUP88 [Momordica charantia][more]
XP_022995007.10.0e+0087.84nuclear pore complex protein NUP88-like [Cucurbita maxima][more]
XP_023518771.10.0e+0087.84nuclear pore complex protein NUP88-like [Cucurbita pepo subsp. pepo][more]
XP_022943164.10.0e+0087.71nuclear pore complex protein NUP88-like [Cucurbita moschata][more]
KAG6600003.10.0e+0087.71Nuclear pore complex protein NUP88, partial [Cucurbita argyrosperma subsp. soror... [more]
BLAST of MS017196 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FFK61.1e-26757.46Nuclear pore complex protein NUP88 OS=Arabidopsis thaliana OX=3702 GN=NUP88 PE=1... [more]
BLAST of MS017196 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DWB90.0e+0098.40nuclear pore complex protein NUP88 OS=Momordica charantia OX=3673 GN=LOC11102372... [more]
A0A6J1JXJ00.0e+0087.84nuclear pore complex protein NUP88-like OS=Cucurbita maxima OX=3661 GN=LOC111490... [more]
A0A6J1FTH00.0e+0087.71nuclear pore complex protein NUP88-like OS=Cucurbita moschata OX=3662 GN=LOC1114... [more]
A0A6J1J9F40.0e+0086.08nuclear pore complex protein NUP88-like isoform X1 OS=Cucurbita maxima OX=3661 G... [more]
A0A6J1GXA70.0e+0085.96nuclear pore complex protein NUP88-like OS=Cucurbita moschata OX=3662 GN=LOC1114... [more]
BLAST of MS017196 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G05680.17.8e-26957.46nuclear pore complex protein-related [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 660..701
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
IPR019321Nucleoporin Nup88PFAMPF10168Nup88coord: 29..214
e-value: 1.5E-14
score: 52.9
coord: 455..800
e-value: 1.8E-6
score: 26.1
IPR037700Nucleoporin NUP88/NUP82PANTHERPTHR13257NUCLEOPORIN NUP84-RELATEDcoord: 17..806
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 45..247

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS017196.1MS017196.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0000055 ribosomal large subunit export from nucleus
biological_process GO:0000056 ribosomal small subunit export from nucleus
molecular_function GO:0005515 protein binding
molecular_function GO:0017056 structural constituent of nuclear pore