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MS017193 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGATAACAACTCCCGCCGGAAATCTAAAACCAAGCCGTCGGCCACGACGACGACCACCACCACCACCAGCGACGACGGCGGCTTCTCCGACGAAGGCGACGCCGAGGTTTGGGCCTCCTTTGACCAGACTTTCCGGCAGGTCCAATCGGTGCTGGACAGAAACAGAGTCCTGATTCAGCAGGTGAATGAGAACCACCAATCTCGAGTTCCAAGTAACATGGTGGACAACGTGGCCCTCATCCAAGAACTCAACGGCAACATCTCCAAAGTGGTCTCTATGTACTCTGATTTCTCCTCTGATTTCTCCTCTTCTTTCAGAAATGGCAAGAGAGGCAGCAGCAACCAAAATGGT ATGGCCGATAACAACTCCCGCCGGAAATCTAAAACCAAGCCGTCGGCCACGACGACGACCACCACCACCACCAGCGACGACGGCGGCTTCTCCGACGAAGGCGACGCCGAGGTTTGGGCCTCCTTTGACCAGACTTTCCGGCAGGTCCAATCGGTGCTGGACAGAAACAGAGTCCTGATTCAGCAGGTGAATGAGAACCACCAATCTCGAGTTCCAAGTAACATGGTGGACAACGTGGCCCTCATCCAAGAACTCAACGGCAACATCTCCAAAGTGGTCTCTATGTACTCTGATTTCTCCTCTGATTTCTCCTCTTCTTTCAGAAATGGCAAGAGAGGCAGCAGCAACCAAAATGGT ATGGCCGATAACAACTCCCGCCGGAAATCTAAAACCAAGCCGTCGGCCACGACGACGACCACCACCACCACCAGCGACGACGGCGGCTTCTCCGACGAAGGCGACGCCGAGGTTTGGGCCTCCTTTGACCAGACTTTCCGGCAGGTCCAATCGGTGCTGGACAGAAACAGAGTCCTGATTCAGCAGGTGAATGAGAACCACCAATCTCGAGTTCCAAGTAACATGGTGGACAACGTGGCCCTCATCCAAGAACTCAACGGCAACATCTCCAAAGTGGTCTCTATGTACTCTGATTTCTCCTCTGATTTCTCCTCTTCTTTCAGAAATGGCAAGAGAGGCAGCAGCAACCAAAATGGT MADNNSRRKSKTKPSATTTTTTTTSDDGGFSDEGDAEVWASFDQTFRQVQSVLDRNRVLIQQVNENHQSRVPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSSSFRNGKRGSSNQNG Homology
BLAST of MS017193 vs. NCBI nr
Match: XP_022156910.1 (protein EARLY FLOWERING 4-like [Momordica charantia]) HSP 1 Score: 221.5 bits (563), Expect = 3.9e-54 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of MS017193 vs. NCBI nr
Match: KAG6600929.1 (Protein EARLY FLOWERING 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031565.1 Protein EARLY FLOWERING 4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 185.7 bits (470), Expect = 2.4e-43 Identity = 109/126 (86.51%), Postives = 111/126 (88.10%), Query Frame = 0
BLAST of MS017193 vs. NCBI nr
Match: XP_022956860.1 (protein EARLY FLOWERING 4-like [Cucurbita moschata] >XP_023534577.1 protein EARLY FLOWERING 4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 185.7 bits (470), Expect = 2.4e-43 Identity = 109/126 (86.51%), Postives = 111/126 (88.10%), Query Frame = 0
BLAST of MS017193 vs. NCBI nr
Match: XP_038892867.1 (protein EARLY FLOWERING 4-like [Benincasa hispida]) HSP 1 Score: 183.7 bits (465), Expect = 9.1e-43 Identity = 106/130 (81.54%), Postives = 110/130 (84.62%), Query Frame = 0
BLAST of MS017193 vs. NCBI nr
Match: XP_022976942.1 (protein EARLY FLOWERING 4-like [Cucurbita maxima]) HSP 1 Score: 182.2 bits (461), Expect = 2.7e-42 Identity = 107/126 (84.92%), Postives = 110/126 (87.30%), Query Frame = 0
BLAST of MS017193 vs. ExPASy Swiss-Prot
Match: O04211 (Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana OX=3702 GN=ELF4 PE=1 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 6.4e-23 Identity = 55/79 (69.62%), Postives = 63/79 (79.75%), Query Frame = 0
BLAST of MS017193 vs. ExPASy Swiss-Prot
Match: O80877 (Protein ELF4-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EFL1 PE=2 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 8.4e-15 Identity = 40/78 (51.28%), Postives = 54/78 (69.23%), Query Frame = 0
BLAST of MS017193 vs. ExPASy Swiss-Prot
Match: Q8S8F5 (Protein ELF4-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EFL3 PE=3 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 7.1e-14 Identity = 35/83 (42.17%), Postives = 59/83 (71.08%), Query Frame = 0
BLAST of MS017193 vs. ExPASy Swiss-Prot
Match: Q570U6 (Protein ELF4-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EFL4 PE=2 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 3.0e-12 Identity = 39/90 (43.33%), Postives = 57/90 (63.33%), Query Frame = 0
BLAST of MS017193 vs. ExPASy Swiss-Prot
Match: Q94BS8 (Protein ELF4-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EFL2 PE=2 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.6e-10 Identity = 34/81 (41.98%), Postives = 52/81 (64.20%), Query Frame = 0
BLAST of MS017193 vs. ExPASy TrEMBL
Match: A0A6J1DRN5 (protein EARLY FLOWERING 4-like OS=Momordica charantia OX=3673 GN=LOC111023742 PE=3 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 1.9e-54 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of MS017193 vs. ExPASy TrEMBL
Match: A0A6J1GYX8 (protein EARLY FLOWERING 4-like OS=Cucurbita moschata OX=3662 GN=LOC111458427 PE=3 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 1.2e-43 Identity = 109/126 (86.51%), Postives = 111/126 (88.10%), Query Frame = 0
BLAST of MS017193 vs. ExPASy TrEMBL
Match: A0A6J1IH33 (protein EARLY FLOWERING 4-like OS=Cucurbita maxima OX=3661 GN=LOC111477159 PE=3 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 1.3e-42 Identity = 107/126 (84.92%), Postives = 110/126 (87.30%), Query Frame = 0
BLAST of MS017193 vs. ExPASy TrEMBL
Match: A0A5A7SR92 (Protein EARLY FLOWERING 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold970G00230 PE=3 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 7.1e-41 Identity = 103/126 (81.75%), Postives = 109/126 (86.51%), Query Frame = 0
BLAST of MS017193 vs. ExPASy TrEMBL
Match: A0A1S3CIT1 (uncharacterized protein LOC103501440 OS=Cucumis melo OX=3656 GN=LOC103501440 PE=3 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 7.1e-41 Identity = 103/126 (81.75%), Postives = 109/126 (86.51%), Query Frame = 0
BLAST of MS017193 vs. TAIR 10
Match: AT2G40080.1 (Protein of unknown function (DUF1313) ) HSP 1 Score: 108.2 bits (269), Expect = 4.5e-24 Identity = 55/79 (69.62%), Postives = 63/79 (79.75%), Query Frame = 0
BLAST of MS017193 vs. TAIR 10
Match: AT2G29950.1 (ELF4-like 1 ) HSP 1 Score: 81.3 bits (199), Expect = 5.9e-16 Identity = 40/78 (51.28%), Postives = 54/78 (69.23%), Query Frame = 0
BLAST of MS017193 vs. TAIR 10
Match: AT2G06255.1 (ELF4-like 3 ) HSP 1 Score: 78.2 bits (191), Expect = 5.0e-15 Identity = 35/83 (42.17%), Postives = 59/83 (71.08%), Query Frame = 0
BLAST of MS017193 vs. TAIR 10
Match: AT1G17455.1 (ELF4-like 4 ) HSP 1 Score: 72.8 bits (177), Expect = 2.1e-13 Identity = 39/90 (43.33%), Postives = 57/90 (63.33%), Query Frame = 0
BLAST of MS017193 vs. TAIR 10
Match: AT1G17455.2 (ELF4-like 4 ) HSP 1 Score: 72.8 bits (177), Expect = 2.1e-13 Identity = 39/90 (43.33%), Postives = 57/90 (63.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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