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MS017189 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTTGTTGTTCTGCTGCTTATGGCTGAGTTGACTCAGCCGGAGGTCTACTCGCCGAGGACTCTGCAGGTGTGGAAGACGCTGTTGAACTGGTTGGCTTTCTTCTTCCAGATCTTCGTTCAGATCCTCAGAGCTCTCGGGCATCTTCGTCTTCTTTCTTCTTCTTCTTCTTCTTCAACTGATTCTTCGTCTCCGTCTTTTAAGCCCTTGCCGGTCGTTGAGCTCCCTGACCACGACTTTCTCGCCGCCTCCGCCGTTGATATCGCCTCTGTTGAAGATGATGAAGAGTCCGACGGGCGTGTGGAGAAGCTAACGGTATTCTCATTTTCTCTTGTTGATTTCGCTTGATGAATGTGGGGTTTCCCCCAAAATTTCTCGACTGTTCTTGCAACTGAGGAATGGTTTCTGCTGATTTCATTTGCTTAATTTTGAATTTATTGGGGTCTATGGCAATGATGTTTTGCCTAATTTTTTGAGAGTTTGGGAGTAACATTTAAAACGGCGTAGACTTTGGGGAAGGAGGAATGTACATTTTCTTAAATGAAAATAGGGACAGGGAAACTTCAACTTGACTGCCTACGGTTCCACTGTATTGCATGCTGGCGATTCATTCAGTAGATGAAGGAATCTAGCTTTGGAGCATTTGAAGTAACTATGTTCTTCCGTCTTAGAACTGCATGTTATGATTTACGATCTGTCTGGAAATGTTTTCCGCTGCTCTGTAAAACTTCTAATGCCAGAAGTTTGTGGAGATGCTGTGTGAAGTTGAGTGATTTCAAAAATTTCATTTAGCTCCATAAAGGCACTTAGAGGATTGTTGTTTCTTTCTTCTTTCGTTGTTTTTCCCTTTTCTTTCTCTGGGTTGGGGGTGGCATACTTTTTTCCTTCAATTCCACTTTTTCCCTTTCTTTTGTTCCCCTTGTGTACTTCATTTATAGATTATGCATTTGACATTGAGCAATTTCAGATAGTTCTCGACTTGGATGAAACTCTCATATGCGCATATGAGACGTCTAGTTTGCCTGGTGTTATTCGTAGTCAAGCAATAGAAGCTGGACTGAAGTGTTTCGAACTCGAGTGCGTATCTTCAGACAAGGTAATTTCCTTTCCAGTAACCTTGTGTGTAATTTGATTCTCTCTGGGTTTCAGTAAAAGTAAAACTTTCTCACTTGTATATGCTGCTACTTGAAGGACTGTGAAGGGAAGCCTAAGGTCAACTATGTTACTGTCTTTGAGCGTCCGGGTTTGCGCGATTTCTTACACCAACTAGGCGGGTTTGCAGATCTTGTGCTCTTCACAGCTGGTCTTGAAGGTCTGTACTCTTTCCATCCATCATAATTGTCAAGTAAGAACCCTCTACTACCCATCAAAGAAAATAAGAAATGAAATCTGAAGAATGTCATTTATGTATATGCCTCAGGGTACGCGAGACCACTTGTTGACAGGATAGATGAAGAAAATCGATTTAGTCTTCGACTTTATAGGCCTTCAACAATTAGCACGTAAGTACTAAGCTTTTTCCTTTTTGTTCTTGTAGTTAGTTACAGCAAATATTTTCTATTTTTACTTCTATCTAGGTGGGTAGAGTGTCAACTTCAAGTCAGCAAAGACATAATACTTACTTATAGAATTATTGAATCCCAAGGGATTGAACCTGCCCTTTCCAAGAACAAGTTTGAATCATTAAGGAGTTTGAGTAAAACGTTGCTTAACTACTGTATTTAGGCCTAAGAAGTTCATAATTTATTAATGGTACAGGCAATGATTAAGTGTAAAAAAGCTTGTGCAATCACAAATTTTCTTTGGGAGGGACAAAATTTTCCATTCTAAGTTTGTGTATATTATATATAGGGGACGCAAATTAAAAGGAAAACTACAAAATCTTTAGTATTTTATATACTTTTTGAAATTGTGACAAACTGAGACAGGGGCAAACCTTTCTTCTTGGCTCTATCCCTGTTAGTTTGGTTAATAGTTAACTTTCACGGTATTAGTTGGAAACTGAGTATAGTATTCTGTTCTCTTGAGATGTTAAAACTTAAAAGCACCGACTTTCAAAGTGTTTTAAAAACCAAAAACGTAAGTATTCTCAACACTCTCTTCACTCGTGGGCTTGGATAATTGCACAAAGAAGTGGAAATCATTATAAATGGGGAGGAAACGATGCAAGGGTTTGAACACAAGACCTCTCGCTCTGATACCATGTTAAGGATGAATAAACCACCACTAAATTCAAAAGCTTAAGTTGATTGGTTGGGTAGATTTAATTCATATATATGGATTCTCAACAAACTGCATATATCCGTTTTTGGGGATCGTGTTAATTGTTTCACAGGTAATGTTATAAAGACGTAGGATTTTAAATATTAGATGGATGGAAACCTTACAAGCTTCTACAAAAGTTCAAGCTAAGTTACTTAAATTGTGGTTCTGCTACATAATCTATAGGGAATTCCGAGATCACGTGAAGGATCTCTCCTGCCTGTCAAAGGATCTACGAAGAACAGTCATTGTTGACAACAACCCTTTCAGTTTCTTATTGCAACCTCTGAATGGAATTCCTTGCATTCCATTTTCTGCAGGGCAACCACAAGATTCCCAGGTGAGGAAATTTTCTAAATTAGTACATCTTGACAGTATAACTCACTTATTGACCAATCTTTTTCATGTGGCTTCCTCTCCATATACAGCTTCTAGATGTCATTCTTCCACTTCTAAAGCACCTCGCGCTGCAGAACGATGTCAGGCCAGTGCTGTACGAAAGATTCCACATGCC GTTGTTGTTCTGCTGCTTATGGCTGAGTTGACTCAGCCGGAGGTCTACTCGCCGAGGACTCTGCAGGTGTGGAAGACGCTGTTGAACTGGTTGGCTTTCTTCTTCCAGATCTTCGTTCAGATCCTCAGAGCTCTCGGGCATCTTCGTCTTCTTTCTTCTTCTTCTTCTTCTTCAACTGATTCTTCGTCTCCGTCTTTTAAGCCCTTGCCGGTCGTTGAGCTCCCTGACCACGACTTTCTCGCCGCCTCCGCCGTTGATATCGCCTCTGTTGAAGATGATGAAGAGTCCGACGGGCGTGTGGAGAAGCTAACGATAGTTCTCGACTTGGATGAAACTCTCATATGCGCATATGAGACGTCTAGTTTGCCTGGTGTTATTCGTAGTCAAGCAATAGAAGCTGGACTGAAGTGTTTCGAACTCGAGTGCGTATCTTCAGACAAGGACTGTGAAGGGAAGCCTAAGGTCAACTATGTTACTGTCTTTGAGCGTCCGGGTTTGCGCGATTTCTTACACCAACTAGGCGGGTTTGCAGATCTTGTGCTCTTCACAGCTGGTCTTGAAGGGTACGCGAGACCACTTGTTGACAGGATAGATGAAGAAAATCGATTTAGTCTTCGACTTTATAGGCCTTCAACAATTAGCACGGAATTCCGAGATCACGTGAAGGATCTCTCCTGCCTGTCAAAGGATCTACGAAGAACAGTCATTGTTGACAACAACCCTTTCAGTTTCTTATTGCAACCTCTGAATGGAATTCCTTGCATTCCATTTTCTGCAGGGCAACCACAAGATTCCCAGGTGAGGAAATTTTCTAAATTAGTACATCTTGACAGTATAACTCACTTATTGACCAATCTTTTTCATGTGGCTTCCTCTCCATATACAGCTTCTAGATGTCATTCTTCCACTTCTAAAGCACCTCGCGCTGCAGAACGATGTCAGGCCAGTGCTGTACGAAAGATTCCACATGCC GTTGTTGTTCTGCTGCTTATGGCTGAGTTGACTCAGCCGGAGGTCTACTCGCCGAGGACTCTGCAGGTGTGGAAGACGCTGTTGAACTGGTTGGCTTTCTTCTTCCAGATCTTCGTTCAGATCCTCAGAGCTCTCGGGCATCTTCGTCTTCTTTCTTCTTCTTCTTCTTCTTCAACTGATTCTTCGTCTCCGTCTTTTAAGCCCTTGCCGGTCGTTGAGCTCCCTGACCACGACTTTCTCGCCGCCTCCGCCGTTGATATCGCCTCTGTTGAAGATGATGAAGAGTCCGACGGGCGTGTGGAGAAGCTAACGATAGTTCTCGACTTGGATGAAACTCTCATATGCGCATATGAGACGTCTAGTTTGCCTGGTGTTATTCGTAGTCAAGCAATAGAAGCTGGACTGAAGTGTTTCGAACTCGAGTGCGTATCTTCAGACAAGGACTGTGAAGGGAAGCCTAAGGTCAACTATGTTACTGTCTTTGAGCGTCCGGGTTTGCGCGATTTCTTACACCAACTAGGCGGGTTTGCAGATCTTGTGCTCTTCACAGCTGGTCTTGAAGGGTACGCGAGACCACTTGTTGACAGGATAGATGAAGAAAATCGATTTAGTCTTCGACTTTATAGGCCTTCAACAATTAGCACGGAATTCCGAGATCACGTGAAGGATCTCTCCTGCCTGTCAAAGGATCTACGAAGAACAGTCATTGTTGACAACAACCCTTTCAGTTTCTTATTGCAACCTCTGAATGGAATTCCTTGCATTCCATTTTCTGCAGGGCAACCACAAGATTCCCAGGTGAGGAAATTTTCTAAATTAGTACATCTTGACAGTATAACTCACTTATTGACCAATCTTTTTCATGTGGCTTCCTCTCCATATACAGCTTCTAGATGTCATTCTTCCACTTCTAAAGCACCTCGCGCTGCAGAACGATGTCAGGCCAGTGCTGTACGAAAGATTCCACATGCC VVVLLLMAELTQPEVYSPRTLQVWKTLLNWLAFFFQIFVQILRALGHLRLLSSSSSSSTDSSSPSFKPLPVVELPDHDFLAASAVDIASVEDDEESDGRVEKLTIVLDLDETLICAYETSSLPGVIRSQAIEAGLKCFELECVSSDKDCEGKPKVNYVTVFERPGLRDFLHQLGGFADLVLFTAGLEGYARPLVDRIDEENRFSLRLYRPSTISTEFRDHVKDLSCLSKDLRRTVIVDNNPFSFLLQPLNGIPCIPFSAGQPQDSQVRKFSKLVHLDSITHLLTNLFHVASSPYTASRCHSSTSKAPRAAERCQASAVRKIPHA Homology
BLAST of MS017189 vs. NCBI nr
Match: XP_022156927.1 (CTD nuclear envelope phosphatase 1 homolog [Momordica charantia]) HSP 1 Score: 513.5 bits (1321), Expect = 1.4e-141 Identity = 265/280 (94.64%), Postives = 267/280 (95.36%), Query Frame = 0
BLAST of MS017189 vs. NCBI nr
Match: KAG6599998.1 (CTD nuclear envelope phosphatase 1-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 478.0 bits (1229), Expect = 6.4e-131 Identity = 246/280 (87.86%), Postives = 256/280 (91.43%), Query Frame = 0
BLAST of MS017189 vs. NCBI nr
Match: KAG7030671.1 (CTD nuclear envelope phosphatase 1-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 476.9 bits (1226), Expect = 1.4e-130 Identity = 245/280 (87.50%), Postives = 256/280 (91.43%), Query Frame = 0
BLAST of MS017189 vs. NCBI nr
Match: XP_023518709.1 (CTD nuclear envelope phosphatase 1 homolog isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 476.5 bits (1225), Expect = 1.9e-130 Identity = 244/280 (87.14%), Postives = 256/280 (91.43%), Query Frame = 0
BLAST of MS017189 vs. NCBI nr
Match: XP_022996141.1 (CTD nuclear envelope phosphatase 1 homolog isoform X2 [Cucurbita maxima]) HSP 1 Score: 474.2 bits (1219), Expect = 9.2e-130 Identity = 243/280 (86.79%), Postives = 255/280 (91.07%), Query Frame = 0
BLAST of MS017189 vs. ExPASy Swiss-Prot
Match: Q54GB2 (CTD small phosphatase-like protein 2 OS=Dictyostelium discoideum OX=44689 GN=ctdspl2 PE=3 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 7.1e-16 Identity = 53/153 (34.64%), Postives = 84/153 (54.90%), Query Frame = 0
BLAST of MS017189 vs. ExPASy Swiss-Prot
Match: O14595 (Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 OS=Homo sapiens OX=9606 GN=CTDSP2 PE=1 SV=2) HSP 1 Score: 85.1 bits (209), Expect = 1.6e-15 Identity = 58/163 (35.58%), Postives = 87/163 (53.37%), Query Frame = 0
BLAST of MS017189 vs. ExPASy Swiss-Prot
Match: Q8BX07 (Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 OS=Mus musculus OX=10090 GN=Ctdsp2 PE=2 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 6.0e-15 Identity = 56/163 (34.36%), Postives = 85/163 (52.15%), Query Frame = 0
BLAST of MS017189 vs. ExPASy Swiss-Prot
Match: Q9XYL0 (Probable C-terminal domain small phosphatase OS=Dictyostelium discoideum OX=44689 GN=fcpA PE=3 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 7.8e-15 Identity = 54/151 (35.76%), Postives = 80/151 (52.98%), Query Frame = 0
BLAST of MS017189 vs. ExPASy Swiss-Prot
Match: Q09695 (Uncharacterized protein C2F7.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC2F7.02c PE=1 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 8.7e-14 Identity = 48/152 (31.58%), Postives = 84/152 (55.26%), Query Frame = 0
BLAST of MS017189 vs. ExPASy TrEMBL
Match: A0A6J1DT92 (CTD nuclear envelope phosphatase 1 homolog OS=Momordica charantia OX=3673 GN=LOC111023754 PE=4 SV=1) HSP 1 Score: 513.5 bits (1321), Expect = 6.6e-142 Identity = 265/280 (94.64%), Postives = 267/280 (95.36%), Query Frame = 0
BLAST of MS017189 vs. ExPASy TrEMBL
Match: A0A6J1K3V8 (CTD nuclear envelope phosphatase 1 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491444 PE=4 SV=1) HSP 1 Score: 474.2 bits (1219), Expect = 4.5e-130 Identity = 243/280 (86.79%), Postives = 255/280 (91.07%), Query Frame = 0
BLAST of MS017189 vs. ExPASy TrEMBL
Match: A0A6J1FRE3 (CTD nuclear envelope phosphatase 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111447759 PE=4 SV=1) HSP 1 Score: 473.0 bits (1216), Expect = 9.9e-130 Identity = 246/280 (87.86%), Postives = 255/280 (91.07%), Query Frame = 0
BLAST of MS017189 vs. ExPASy TrEMBL
Match: A0A5D3DVZ9 (Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold970G00150 PE=4 SV=1) HSP 1 Score: 460.3 bits (1183), Expect = 6.7e-126 Identity = 239/280 (85.36%), Postives = 247/280 (88.21%), Query Frame = 0
BLAST of MS017189 vs. ExPASy TrEMBL
Match: A0A1S3CIT5 (carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 OS=Cucumis melo OX=3656 GN=LOC103501444 PE=4 SV=1) HSP 1 Score: 460.3 bits (1183), Expect = 6.7e-126 Identity = 239/280 (85.36%), Postives = 247/280 (88.21%), Query Frame = 0
BLAST of MS017189 vs. TAIR 10
Match: AT3G55960.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 347.4 bits (890), Expect = 1.2e-95 Identity = 185/285 (64.91%), Postives = 220/285 (77.19%), Query Frame = 0
BLAST of MS017189 vs. TAIR 10
Match: AT1G29780.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 100.9 bits (250), Expect = 2.0e-21 Identity = 62/157 (39.49%), Postives = 90/157 (57.32%), Query Frame = 0
BLAST of MS017189 vs. TAIR 10
Match: AT5G45700.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 93.6 bits (231), Expect = 3.1e-19 Identity = 62/180 (34.44%), Postives = 93/180 (51.67%), Query Frame = 0
BLAST of MS017189 vs. TAIR 10
Match: AT1G29770.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 87.4 bits (215), Expect = 2.3e-17 Identity = 60/173 (34.68%), Postives = 93/173 (53.76%), Query Frame = 0
BLAST of MS017189 vs. TAIR 10
Match: AT5G11860.1 (SCP1-like small phosphatase 5 ) HSP 1 Score: 70.1 bits (170), Expect = 3.7e-12 Identity = 47/152 (30.92%), Postives = 81/152 (53.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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