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MS017153 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTCAATGTTGCTCTTTCTTTTGTTTCTACACTATTAAATTTCAAATCAACGCTTCTCGTCGGAGGAGCCGAAGTAGAAGTAGACATGAAGATAATTAAAGACGAAGATGCAAATTTGTTGATTGGGACTCCTGGAAGGCTA TTCAATGTTGCTCTTTCTTTTGTTTCTACACTATTAAATTTCAAATCAACGCTTCTCGTCGGAGGAGCCGAAGTAGAAGTAGACATGAAGATAATTAAAGACGAAGATGCAAATTTGTTGATTGGGACTCCTGGAAGGCTA TTCAATGTTGCTCTTTCTTTTGTTTCTACACTATTAAATTTCAAATCAACGCTTCTCGTCGGAGGAGCCGAAGTAGAAGTAGACATGAAGATAATTAAAGACGAAGATGCAAATTTGTTGATTGGGACTCCTGGAAGGCTA FNVALSFVSTLLNFKSTLLVGGAEVEVDMKIIKDEDANLLIGTPGRL Homology
BLAST of MS017153 vs. NCBI nr
Match: XP_022146827.1 (DEAD-box ATP-dependent RNA helicase 18 [Momordica charantia]) HSP 1 Score: 75.1 bits (183), Expect = 1.8e-10 Identity = 38/47 (80.85%), Postives = 41/47 (87.23%), Query Frame = 0
BLAST of MS017153 vs. NCBI nr
Match: KGN50318.2 (hypothetical protein Csa_005855 [Cucumis sativus]) HSP 1 Score: 70.5 bits (171), Expect = 4.4e-09 Identity = 34/47 (72.34%), Postives = 41/47 (87.23%), Query Frame = 0
BLAST of MS017153 vs. NCBI nr
Match: XP_038891300.1 (DEAD-box ATP-dependent RNA helicase 18 [Benincasa hispida]) HSP 1 Score: 70.5 bits (171), Expect = 4.4e-09 Identity = 35/47 (74.47%), Postives = 41/47 (87.23%), Query Frame = 0
BLAST of MS017153 vs. NCBI nr
Match: XP_004148172.1 (DEAD-box ATP-dependent RNA helicase 18 [Cucumis sativus]) HSP 1 Score: 70.5 bits (171), Expect = 4.4e-09 Identity = 34/47 (72.34%), Postives = 41/47 (87.23%), Query Frame = 0
BLAST of MS017153 vs. NCBI nr
Match: XP_008454834.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 18 [Cucumis melo] >KAA0035926.1 DEAD-box ATP-dependent RNA helicase 18 [Cucumis melo var. makuwa] >TYK19076.1 DEAD-box ATP-dependent RNA helicase 18 [Cucumis melo var. makuwa]) HSP 1 Score: 70.1 bits (170), Expect = 5.8e-09 Identity = 34/47 (72.34%), Postives = 41/47 (87.23%), Query Frame = 0
BLAST of MS017153 vs. ExPASy Swiss-Prot
Match: Q9FLB0 (DEAD-box ATP-dependent RNA helicase 18 OS=Arabidopsis thaliana OX=3702 GN=RH18 PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 2.4e-10 Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 0
BLAST of MS017153 vs. ExPASy Swiss-Prot
Match: Q8GXD6 (DEAD-box ATP-dependent RNA helicase 49 OS=Arabidopsis thaliana OX=3702 GN=RH49 PE=2 SV=2) HSP 1 Score: 60.1 bits (144), Expect = 7.9e-09 Identity = 31/45 (68.89%), Postives = 34/45 (75.56%), Query Frame = 0
BLAST of MS017153 vs. ExPASy Swiss-Prot
Match: Q761Z9 (DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0164500 PE=1 SV=2) HSP 1 Score: 51.2 bits (121), Expect = 3.7e-06 Identity = 22/47 (46.81%), Postives = 35/47 (74.47%), Query Frame = 0
BLAST of MS017153 vs. ExPASy TrEMBL
Match: A0A6J1D0N8 (DEAD-box ATP-dependent RNA helicase 18 OS=Momordica charantia OX=3673 GN=LOC111015937 PE=3 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 8.7e-11 Identity = 38/47 (80.85%), Postives = 41/47 (87.23%), Query Frame = 0
BLAST of MS017153 vs. ExPASy TrEMBL
Match: A0A0A0KSG4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G217150 PE=3 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 2.2e-09 Identity = 34/47 (72.34%), Postives = 41/47 (87.23%), Query Frame = 0
BLAST of MS017153 vs. ExPASy TrEMBL
Match: A0A5D3D6C0 (DEAD-box ATP-dependent RNA helicase 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold529G00410 PE=3 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.8e-09 Identity = 34/47 (72.34%), Postives = 41/47 (87.23%), Query Frame = 0
BLAST of MS017153 vs. ExPASy TrEMBL
Match: A0A1S3BZH6 (DEAD-box ATP-dependent RNA helicase 18 OS=Cucumis melo OX=3656 GN=LOC103495147 PE=3 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.8e-09 Identity = 34/47 (72.34%), Postives = 41/47 (87.23%), Query Frame = 0
BLAST of MS017153 vs. ExPASy TrEMBL
Match: A0A6P3ZPY5 (DEAD-box ATP-dependent RNA helicase 18 OS=Ziziphus jujuba OX=326968 GN=LOC107413915 PE=3 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 3.7e-09 Identity = 35/47 (74.47%), Postives = 40/47 (85.11%), Query Frame = 0
BLAST of MS017153 vs. TAIR 10
Match: AT5G05450.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 65.1 bits (157), Expect = 1.7e-11 Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 0
BLAST of MS017153 vs. TAIR 10
Match: AT1G71370.1 (DEA(D/H)-box RNA helicase family protein ) HSP 1 Score: 60.1 bits (144), Expect = 5.6e-10 Identity = 31/45 (68.89%), Postives = 34/45 (75.56%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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