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MS017085 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AGAATATGGAAACTAAACGTTGTGCCAAAAATTCGAACATTCATACTGAGATTTGCGCATAATTTCATTCCAACGATGTTAAATTCGAGCCAGAAAGGTTTAAATGTCTCACCTTTCTATCTATGTTGTCGTTCTCAGGAAGAATCTACTACTCATGCTCTATTGGCTTGTCTTCGAGCACAGCAAATCTGG AGAATATGGAAACTAAACGTTGTGCCAAAAATTCGAACATTCATACTGAGATTTGCGCATAATTTCATTCCAACGATGTTAAATTCGAGCCAGAAAGGTTTAAATGTCTCACCTTTCTATCTATGTTGTCGTTCTCAGGAAGAATCTACTACTCATGCTCTATTGGCTTGTCTTCGAGCACAGCAAATCTGG AGAATATGGAAACTAAACGTTGTGCCAAAAATTCGAACATTCATACTGAGATTTGCGCATAATTTCATTCCAACGATGTTAAATTCGAGCCAGAAAGGTTTAAATGTCTCACCTTTCTATCTATGTTGTCGTTCTCAGGAAGAATCTACTACTCATGCTCTATTGGCTTGTCTTCGAGCACAGCAAATCTGG RIWKLNVVPKIRTFILRFAHNFIPTMLNSSQKGLNVSPFYLCCRSQEESTTHALLACLRAQQIW Homology
BLAST of MS017085 vs. NCBI nr
Match: KAF7812642.1 (reverse transcriptase [Senna tora]) HSP 1 Score: 64.7 bits (156), Expect = 3.3e-07 Identity = 26/63 (41.27%), Postives = 40/63 (63.49%), Query Frame = 0
BLAST of MS017085 vs. NCBI nr
Match: XP_030963521.1 (uncharacterized protein LOC115984637 [Quercus lobata]) HSP 1 Score: 62.4 bits (150), Expect = 1.6e-06 Identity = 26/64 (40.62%), Postives = 39/64 (60.94%), Query Frame = 0
BLAST of MS017085 vs. NCBI nr
Match: KAF7824053.1 (hypothetical protein G2W53_022197 [Senna tora]) HSP 1 Score: 62.4 bits (150), Expect = 1.6e-06 Identity = 28/64 (43.75%), Postives = 35/64 (54.69%), Query Frame = 0
BLAST of MS017085 vs. NCBI nr
Match: XP_023918548.1 (uncharacterized protein LOC112030098 [Quercus suber]) HSP 1 Score: 60.8 bits (146), Expect = 4.8e-06 Identity = 27/62 (43.55%), Postives = 38/62 (61.29%), Query Frame = 0
BLAST of MS017085 vs. NCBI nr
Match: KAF7825130.1 (putative RNA-directed DNA polymerase [Senna tora]) HSP 1 Score: 59.7 bits (143), Expect = 1.1e-05 Identity = 24/64 (37.50%), Postives = 36/64 (56.25%), Query Frame = 0
BLAST of MS017085 vs. ExPASy TrEMBL
Match: A0A2N9HRC9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42071 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.3e-06 Identity = 28/64 (43.75%), Postives = 38/64 (59.38%), Query Frame = 0
BLAST of MS017085 vs. ExPASy TrEMBL
Match: A0A7N2LAI0 (zf-RVT domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 5.2e-06 Identity = 28/63 (44.44%), Postives = 37/63 (58.73%), Query Frame = 0
BLAST of MS017085 vs. ExPASy TrEMBL
Match: A0A445C0H0 (RNase H domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A08g040672 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.2e-05 Identity = 27/63 (42.86%), Postives = 37/63 (58.73%), Query Frame = 0
BLAST of MS017085 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.5e-05 Identity = 29/63 (46.03%), Postives = 34/63 (53.97%), Query Frame = 0
BLAST of MS017085 vs. ExPASy TrEMBL
Match: A0A803Q9W0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.6e-05 Identity = 23/63 (36.51%), Postives = 36/63 (57.14%), Query Frame = 0
BLAST of MS017085 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 43.1 bits (100), Expect = 9.6e-05 Identity = 19/64 (29.69%), Postives = 32/64 (50.00%), Query Frame = 0
BLAST of MS017085 vs. TAIR 10
Match: AT2G02650.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 42.7 bits (99), Expect = 1.3e-04 Identity = 19/63 (30.16%), Postives = 30/63 (47.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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