MS017076 (gene) Bitter gourd (TR) v1

Overview


Name	MS017076
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	glutamyl-tRNA reductase-binding protein, chloroplastic
Location	scaffold197: 1271681 .. 1274167 (-)
RNA-Seq Expression	MS017076
Synteny	MS017076

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACTGTGGCGCCGCCTTCTTTAATCTTCAAATTTCGTTCTCCCACTGCCTTTAATGGCCGAACCGCCGTTCATTTTCCCCGTTCTTCCACCGCTTTCTTCAATCCTCGTACTCCATTTTCCATGGCCGCGTCAACCGAGTCCACGTCTCAGGTACCTCCTCTTTTCTCCCCTTTCCAGCCATCAATTCGTTGCTTCATTTCTTGTTTTTTGTTAATTTCATTCGTTTTTATGATCAGACTGTAGCGTCCGGCGATGCTAACAGCAATGAAATTGATATCTCGAAGTTGATTCAAGCTCACCAGGTATTTGTTTGAAAATTTTGTTATTGTCTTTTGTTTGAGATTTGTTGCTGATGAGAGTAGCAATACGTGCCTGTTTCATTGGTGAAAAGATTGTCGCTCTGGTAGTTTGGTGATGATGGTTTTCAATTTCAAGCTTTGATTGCTTGTGCAGAATTGCTCGTTGTGTTCTGTCTATTTATCATGTTCTTGCTGAATGATGATGTTTCAGGAGAATGCGGCTCGGCTTTCGCCAGCTGAAGAGATTCGAACTTTGTTGGATCAGAGCGTGCGCGGCATGCTCTCCACCTTTTCCCGGGTTTTGACTCTCTTTTGATCTTTAGTCCTCTTATCTCTATCGCCTTTTGGAATTTGCTACATAGCTATAAACTTGTGACGGACACTCCTAGCGCATTTAGATCTGTTTTTTTTTATCAGTCATTTGCACTTGGTTGATTTCTTAGTCTTTGTTAATAAGGTCTACTCCTGTGCAGAGCTTTGAAGGTTATCCATCTGGGTCTCTTGTTGACTTTGCATGTGATGCTGATGGAACTCCAGTACTTGCTGTAAGCAGCCTAGCAGAGCACGCTAAGGTATCATTCATCCTTATGCATCCAATTGAGAATTTTGGTTTTGGTAGCAATTCTTGTACATTATTGGATTTTATGTGCGAAGTAATCATCAATCTTTTGAAAGTTTGGTCTTTCTTTCCTTTGCAGAATTTGGCAACTAATCCAAAATGCTCGTTGCTTGTGGCAAAAGAACCCGAAGATAGGGGAACTTTAGTGGTCACTCTTCATGGTGATGTGGTGTCTGTAAGATATATCGCCTATGTTCACTTTTTCTTTCTTCTTTCCATGTGTTATTCTGTCTCATTGCTTGTGTGCATTCATTAGAATGCATAGATATGTGTCTGTTCGTGCGTGTTTTAAAGGAAAAATGTTGTTCTTGGTTAATGCTACAGCATGATAATCGGAAATTTATGGAATTGTTTGTAATTTAGGTTTCTGAAGAAGATAGGCCTGCTGTTCGTGCTGCATATTTGTCCAAGCATCCAAATGCATTTTGGGTAGCTAACCCCTCCAGTATACTTATATTTCGCATCAGATGTTTCTTCTAGTTTATATGTAAAAGATGAATGAACACTTCCTATTTGAAGGTTGACTTTGGTGACTTCCAATTTGTGTACATCAAACCAAAAGTGATACGATACGTGTCTGGGGTTGCAACAGCTTCTTTAGGTTCAGGAGGTTTGTGTACATAGACTGCATTTTCTCATCTTCTTCCTCTCCTCTGCTTTTGCATATAAAACTTGATCTTAATTTTCATCAAAAGCAAAGAAAGAAAGGGTTTTATTTAACTGGATTTCTTGAAGCAGGTCTTTCAAAGTCTGCTTAACTTAAATGTCTCATAACTTATTGCCTGCATATCAGGCCTCTTCTTGCTCACGCATATCTAACTCTTTTTACCTTTTTAATCCAAGAACTAAGTGGTGAAGAGTACAAGGCAGCAAAAGTTGATCCAATAGCTCAATTTTCAAAGCCTGTCACGGTGATGACATCATCTTAAGATCTTGCCTGTTATCTCAATTTTAACTGCAAATCACGTATTTTCTGATTCAGATTCTCCTTTTCTATAGTCTCACATGAATAGAGATCATACTGAAGATACAAAGATCATTGTGAGACACTGGACATCCATTCCGGTAAAACTAATATAATCTAGGCATTTGTTTTGTTCAATTAAAGTTCACTTAGGATGATTAAATATTTGTTAGTTTTCAATTTCAATTACATTTTGGATCGTGTAATCTGTAATGAGCGAATACGTCAAAATTGGATGGAGTAATCTAGGGTGGCTTTTGAGAATAATTTATATGCAAATATACTTTATCAGTTTTAAGTTTTTAATCATTTCAATTTTAGTAACTGAAACTTCTAGCTATGAAATTGCATTTACTTTGTTTTTTTGGAATGCATAGGAGGGACAACACTAGTTTTCTCAGGCACAGAGAGAGAGAGTGAGAGAGAGAGAGAGTGAGAGGGACAACGGCCCACCTTGTTCTTACACTGATTTGTTAGCAGTATGTATAATTAATTTATGGATACTTTGTTGAAGTGTCCATGTGAGACTACTACTTCTTTATCTGCAGGTTGATTCGGCCATCATGCTGGATTTGGATAGCCTTGGTATTAATGTCAAG

mRNA sequence

ATGGCGACTGTGGCGCCGCCTTCTTTAATCTTCAAATTTCGTTCTCCCACTGCCTTTAATGGCCGAACCGCCGTTCATTTTCCCCGTTCTTCCACCGCTTTCTTCAATCCTCGTACTCCATTTTCCATGGCCGCGTCAACCGAGTCCACGTCTCAGACTGTAGCGTCCGGCGATGCTAACAGCAATGAAATTGATATCTCGAAGTTGATTCAAGCTCACCAGGAGAATGCGGCTCGGCTTTCGCCAGCTGAAGAGATTCGAACTTTGTTGGATCAGAGCGTGCGCGGCATGCTCTCCACCTTTTCCCGGAGCTTTGAAGGTTATCCATCTGGGTCTCTTGTTGACTTTGCATGTGATGCTGATGGAACTCCAGTACTTGCTGTAAGCAGCCTAGCAGAGCACGCTAAGAATTTGGCAACTAATCCAAAATGCTCGTTGCTTGTGGCAAAAGAACCCGAAGATAGGGGAACTTTAGTGGTCACTCTTCATGGTGATGTGGTGTCTGTTTCTGAAGAAGATAGGCCTGCTGTTCGTGCTGCATATTTGTCCAAGCATCCAAATGCATTTTGGGTTGACTTTGGTGACTTCCAATTTGTGTACATCAAACCAAAAGTGATACGATACGTGTCTGGGGTTGCAACAGCTTCTTTAGGTTCAGGAGAACTAAGTGGTGAAGAGTACAAGGCAGCAAAAGTTGATCCAATAGCTCAATTTTCAAAGCCTGTCACGTCTCACATGAATAGAGATCATACTGAAGATACAAAGATCATTGTGAGACACTGGACATCCATTCCGGTTGATTCGGCCATCATGCTGGATTTGGATAGCCTTGGTATTAATGTCAAG

Coding sequence (CDS)

ATGGCGACTGTGGCGCCGCCTTCTTTAATCTTCAAATTTCGTTCTCCCACTGCCTTTAATGGCCGAACCGCCGTTCATTTTCCCCGTTCTTCCACCGCTTTCTTCAATCCTCGTACTCCATTTTCCATGGCCGCGTCAACCGAGTCCACGTCTCAGACTGTAGCGTCCGGCGATGCTAACAGCAATGAAATTGATATCTCGAAGTTGATTCAAGCTCACCAGGAGAATGCGGCTCGGCTTTCGCCAGCTGAAGAGATTCGAACTTTGTTGGATCAGAGCGTGCGCGGCATGCTCTCCACCTTTTCCCGGAGCTTTGAAGGTTATCCATCTGGGTCTCTTGTTGACTTTGCATGTGATGCTGATGGAACTCCAGTACTTGCTGTAAGCAGCCTAGCAGAGCACGCTAAGAATTTGGCAACTAATCCAAAATGCTCGTTGCTTGTGGCAAAAGAACCCGAAGATAGGGGAACTTTAGTGGTCACTCTTCATGGTGATGTGGTGTCTGTTTCTGAAGAAGATAGGCCTGCTGTTCGTGCTGCATATTTGTCCAAGCATCCAAATGCATTTTGGGTTGACTTTGGTGACTTCCAATTTGTGTACATCAAACCAAAAGTGATACGATACGTGTCTGGGGTTGCAACAGCTTCTTTAGGTTCAGGAGAACTAAGTGGTGAAGAGTACAAGGCAGCAAAAGTTGATCCAATAGCTCAATTTTCAAAGCCTGTCACGTCTCACATGAATAGAGATCATACTGAAGATACAAAGATCATTGTGAGACACTGGACATCCATTCCGGTTGATTCGGCCATCATGCTGGATTTGGATAGCCTTGGTATTAATGTCAAG

Protein sequence

MATVAPPSLIFKFRSPTAFNGRTAVHFPRSSTAFFNPRTPFSMAASTESTSQTVASGDANSNEIDISKLIQAHQENAARLSPAEEIRTLLDQSVRGMLSTFSRSFEGYPSGSLVDFACDADGTPVLAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLVVTLHGDVVSVSEEDRPAVRAAYLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELSGEEYKAAKVDPIAQFSKPVTSHMNRDHTEDTKIIVRHWTSIPVDSAIMLDLDSLGINVK

Homology

[Close]

BLAST of MS017076 vs. NCBI nr
Match: XP_022156249.1 (glutamyl-tRNA reductase-binding protein, chloroplastic [Momordica charantia])

HSP 1 Score: 551.2 bits (1419), Expect = 5.2e-153
Identity = 281/282 (99.65%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MATVAPPSLIFKFRSPTAFNGRTAVHFPRSSTAFFNPRTPFSMAASTESTSQTVASGDAN 60
           MATVAPPSLIFKFRSPTAFNGRTAVHFPRSSTAFFNPRTPFSMAASTESTSQTVASGDAN
Sbjct: 1   MATVAPPSLIFKFRSPTAFNGRTAVHFPRSSTAFFNPRTPFSMAASTESTSQTVASGDAN 60

Query: 61  SNEIDISKLIQAHQENAARLSPAEEIRTLLDQSVRGMLSTFSRSFEGYPSGSLVDFACDA 120
           SNEIDISKLIQAHQENAARLSPAEEIRTLLDQSVRGMLSTFSRSFEGYPSGSLVDFACDA
Sbjct: 61  SNEIDISKLIQAHQENAARLSPAEEIRTLLDQSVRGMLSTFSRSFEGYPSGSLVDFACDA 120

Query: 121 DGTPVLAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLVVTLHGDVVSVSEEDRPAVRAA 180
           DGTPVLAVSSLAEHAKNLATNPKCSLLVAK+PEDRGTLVVTLHGDVVSVSEEDRPAVRAA
Sbjct: 121 DGTPVLAVSSLAEHAKNLATNPKCSLLVAKQPEDRGTLVVTLHGDVVSVSEEDRPAVRAA 180

Query: 181 YLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELSGEEYKAAKVDPIAQFSK 240
           YLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELSGEEYKAAKVDPIAQFSK
Sbjct: 181 YLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELSGEEYKAAKVDPIAQFSK 240

Query: 241 PVTSHMNRDHTEDTKIIVRHWTSIPVDSAIMLDLDSLGINVK 283
           PVTSHMNRDHTEDTKIIVRHWTSIPVDSAIMLDLDSLGINVK
Sbjct: 241 PVTSHMNRDHTEDTKIIVRHWTSIPVDSAIMLDLDSLGINVK 282

[Close]

BLAST of MS017076 vs. NCBI nr
Match: XP_022925000.1 (glutamyl-tRNA reductase-binding protein, chloroplastic [Cucurbita moschata])

HSP 1 Score: 483.0 bits (1242), Expect = 1.7e-132
Identity = 249/287 (86.76%), Postives = 259/287 (90.24%), Query Frame = 0


Query: 1   MATVAPPSLIFKFRSPTAFNGRTAVHFPRSSTAFFNP----RTPFSMAASTESTSQTVAS 60
           MATV PPSL F+FRS   FNGR   HFPRS  + FNP    R PFSMAASTESTSQ VAS
Sbjct: 1   MATVTPPSLTFQFRSRNTFNGRIGFHFPRSLASSFNPRLRFRLPFSMAASTESTSQAVAS 60

Query: 61  G-DANSNEIDISKLIQAHQENAARLSPAEEIRTLLDQSVRGMLSTFSRSFEGYPSGSLVD 120
           G DANS+EID+SKLIQAHQE AARL PAEEIRTLLDQSVRGMLSTFSRSFEGYPSGS VD
Sbjct: 61  GDDANSDEIDVSKLIQAHQEKAARLLPAEEIRTLLDQSVRGMLSTFSRSFEGYPSGSFVD 120

Query: 121 FACDADGTPVLAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLVVTLHGDVVSVSEEDRP 180
           FACDADGTP+LAVSSLAEHAKNLA NPKCSLLVAKEPEDRGTLVVT+HGD V VSEEDRP
Sbjct: 121 FACDADGTPILAVSSLAEHAKNLAANPKCSLLVAKEPEDRGTLVVTVHGDAVPVSEEDRP 180

Query: 181 AVRAAYLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELSGEEYKAAKVDPI 240
           AVRAAYLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELS EEYKAA+VDPI
Sbjct: 181 AVRAAYLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELSSEEYKAAQVDPI 240

Query: 241 AQFSKPVTSHMNRDHTEDTKIIVRHWTSIPVDSAIMLDLDSLGINVK 283
            QF+KPV SHMNRDHTEDTK+IVRHW+SIPVDSAIMLDLDSLG NVK
Sbjct: 241 VQFAKPVMSHMNRDHTEDTKMIVRHWSSIPVDSAIMLDLDSLGFNVK 287

[Close]

BLAST of MS017076 vs. NCBI nr
Match: XP_038883739.1 (uncharacterized protein LOC120074631 isoform X1 [Benincasa hispida])

HSP 1 Score: 480.7 bits (1236), Expect = 8.6e-132
Identity = 246/284 (86.62%), Postives = 259/284 (91.20%), Query Frame = 0


Query: 1   MATVAPPSLIFKFRSPTAFNGRTAVHFPRSSTAFFNP--RTPFSMAASTESTSQTVASGD 60
           MAT+ PPSL F+F S +AFNGR A +FPRS T+  NP  R P SMAASTESTSQTV SG+
Sbjct: 1   MATLTPPSLTFRFCSRSAFNGRIAFYFPRSLTSSLNPRLRLPLSMAASTESTSQTVPSGN 60

Query: 61  ANSNEIDISKLIQAHQENAARLSPAEEIRTLLDQSVRGMLSTFSRSFEGYPSGSLVDFAC 120
           ANS++ID+SKLIQAHQE AARLSPAEEIRTLLDQSVRGMLSTFSRSFEGYPSGS VDFAC
Sbjct: 61  ANSDDIDVSKLIQAHQEKAARLSPAEEIRTLLDQSVRGMLSTFSRSFEGYPSGSFVDFAC 120

Query: 121 DADGTPVLAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLVVTLHGDVVSVSEEDRPAVR 180
           DADGTP+LAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLVVTLHGD V V EEDRPA R
Sbjct: 121 DADGTPILAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLVVTLHGDAVVVPEEDRPAAR 180

Query: 181 AAYLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELSGEEYKAAKVDPIAQF 240
           AAYLSKHPNAFWVDFGDF FVYIKPK IRYVSGVATASLGSGELSGEEYKAA+VDPIAQF
Sbjct: 181 AAYLSKHPNAFWVDFGDFHFVYIKPKAIRYVSGVATASLGSGELSGEEYKAAQVDPIAQF 240

Query: 241 SKPVTSHMNRDHTEDTKIIVRHWTSIPVDSAIMLDLDSLGINVK 283
           +KPVTSHMNRDH EDTK IVRHWTSIPVDSAIMLDLDSLG NV+
Sbjct: 241 AKPVTSHMNRDHAEDTKNIVRHWTSIPVDSAIMLDLDSLGFNVQ 284

[Close]

BLAST of MS017076 vs. NCBI nr
Match: XP_023517122.1 (glutamyl-tRNA reductase-binding protein, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 479.6 bits (1233), Expect = 1.9e-131
Identity = 247/287 (86.06%), Postives = 257/287 (89.55%), Query Frame = 0


Query: 1   MATVAPPSLIFKFRSPTAFNGRTAVHFPRSSTAFFNP----RTPFSMAASTESTSQTVAS 60
           MAT  PPSL F+FRS   FNGR   HFPRS  + FNP    R PF M+ASTESTSQ VAS
Sbjct: 1   MATATPPSLTFQFRSRNTFNGRIGFHFPRSLASSFNPRLRFRLPFLMSASTESTSQAVAS 60

Query: 61  G-DANSNEIDISKLIQAHQENAARLSPAEEIRTLLDQSVRGMLSTFSRSFEGYPSGSLVD 120
           G DANS+EID+SKLIQAHQE AARL PAEEIRTLLDQSVRGMLSTFSRSFEGYPSGS VD
Sbjct: 61  GDDANSDEIDVSKLIQAHQEKAARLLPAEEIRTLLDQSVRGMLSTFSRSFEGYPSGSFVD 120

Query: 121 FACDADGTPVLAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLVVTLHGDVVSVSEEDRP 180
           FACDADGTP+LAVSSLAEHAKNLA NPKCSLLVAKEPEDRGTLVVT+HGD V VSEEDRP
Sbjct: 121 FACDADGTPILAVSSLAEHAKNLAANPKCSLLVAKEPEDRGTLVVTVHGDAVPVSEEDRP 180

Query: 181 AVRAAYLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELSGEEYKAAKVDPI 240
           AVRAAYLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELS EEYKAA+VDPI
Sbjct: 181 AVRAAYLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELSSEEYKAAQVDPI 240

Query: 241 AQFSKPVTSHMNRDHTEDTKIIVRHWTSIPVDSAIMLDLDSLGINVK 283
            QF+KPV SHMNRDHTEDTK+IVRHWTSIPVDSAIMLDLDSLG NVK
Sbjct: 241 VQFAKPVMSHMNRDHTEDTKMIVRHWTSIPVDSAIMLDLDSLGFNVK 287

[Close]

BLAST of MS017076 vs. NCBI nr
Match: XP_022966392.1 (glutamyl-tRNA reductase-binding protein, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 478.4 bits (1230), Expect = 4.2e-131
Identity = 248/287 (86.41%), Postives = 257/287 (89.55%), Query Frame = 0


Query: 1   MATVAPPSLIFKFRSPTAFNGRTAVHFPRSSTAFFNP----RTPFSMAASTESTSQTVAS 60
           MATV PPSL F+FR    FNGR    FPRS  + FNP    R PF M+ASTESTSQ VAS
Sbjct: 1   MATVTPPSLTFQFRPRNTFNGRIGFRFPRSLASSFNPRLRFRLPFLMSASTESTSQAVAS 60

Query: 61  G-DANSNEIDISKLIQAHQENAARLSPAEEIRTLLDQSVRGMLSTFSRSFEGYPSGSLVD 120
           G DANS+EIDISKLIQAHQE AARL PAEEIRTLLDQSVRGMLSTFSRSFEGYPSGS VD
Sbjct: 61  GDDANSDEIDISKLIQAHQEKAARLLPAEEIRTLLDQSVRGMLSTFSRSFEGYPSGSFVD 120

Query: 121 FACDADGTPVLAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLVVTLHGDVVSVSEEDRP 180
           FACDADGTP+LAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLVVT+HGD V VSEEDRP
Sbjct: 121 FACDADGTPILAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLVVTVHGDAVPVSEEDRP 180

Query: 181 AVRAAYLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELSGEEYKAAKVDPI 240
           AVRAAYLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELS EEYKA +VDPI
Sbjct: 181 AVRAAYLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELSSEEYKATQVDPI 240

Query: 241 AQFSKPVTSHMNRDHTEDTKIIVRHWTSIPVDSAIMLDLDSLGINVK 283
           AQF+KPV SHMNRDHTEDTK+IVRHWTSIPVDSAIMLDLDSLG NVK
Sbjct: 241 AQFAKPVMSHMNRDHTEDTKMIVRHWTSIPVDSAIMLDLDSLGFNVK 287

[Close]

BLAST of MS017076 vs. ExPASy TrEMBL
Match: A0A6J1DSV5 (glutamyl-tRNA reductase-binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111023183 PE=4 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 2.5e-153
Identity = 281/282 (99.65%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MATVAPPSLIFKFRSPTAFNGRTAVHFPRSSTAFFNPRTPFSMAASTESTSQTVASGDAN 60
           MATVAPPSLIFKFRSPTAFNGRTAVHFPRSSTAFFNPRTPFSMAASTESTSQTVASGDAN
Sbjct: 1   MATVAPPSLIFKFRSPTAFNGRTAVHFPRSSTAFFNPRTPFSMAASTESTSQTVASGDAN 60

Query: 61  SNEIDISKLIQAHQENAARLSPAEEIRTLLDQSVRGMLSTFSRSFEGYPSGSLVDFACDA 120
           SNEIDISKLIQAHQENAARLSPAEEIRTLLDQSVRGMLSTFSRSFEGYPSGSLVDFACDA
Sbjct: 61  SNEIDISKLIQAHQENAARLSPAEEIRTLLDQSVRGMLSTFSRSFEGYPSGSLVDFACDA 120

Query: 121 DGTPVLAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLVVTLHGDVVSVSEEDRPAVRAA 180
           DGTPVLAVSSLAEHAKNLATNPKCSLLVAK+PEDRGTLVVTLHGDVVSVSEEDRPAVRAA
Sbjct: 121 DGTPVLAVSSLAEHAKNLATNPKCSLLVAKQPEDRGTLVVTLHGDVVSVSEEDRPAVRAA 180

Query: 181 YLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELSGEEYKAAKVDPIAQFSK 240
           YLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELSGEEYKAAKVDPIAQFSK
Sbjct: 181 YLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELSGEEYKAAKVDPIAQFSK 240

Query: 241 PVTSHMNRDHTEDTKIIVRHWTSIPVDSAIMLDLDSLGINVK 283
           PVTSHMNRDHTEDTKIIVRHWTSIPVDSAIMLDLDSLGINVK
Sbjct: 241 PVTSHMNRDHTEDTKIIVRHWTSIPVDSAIMLDLDSLGINVK 282

[Close]

BLAST of MS017076 vs. ExPASy TrEMBL
Match: A0A6J1EGN2 (glutamyl-tRNA reductase-binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111432378 PE=4 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 8.3e-133
Identity = 249/287 (86.76%), Postives = 259/287 (90.24%), Query Frame = 0


Query: 1   MATVAPPSLIFKFRSPTAFNGRTAVHFPRSSTAFFNP----RTPFSMAASTESTSQTVAS 60
           MATV PPSL F+FRS   FNGR   HFPRS  + FNP    R PFSMAASTESTSQ VAS
Sbjct: 1   MATVTPPSLTFQFRSRNTFNGRIGFHFPRSLASSFNPRLRFRLPFSMAASTESTSQAVAS 60

Query: 61  G-DANSNEIDISKLIQAHQENAARLSPAEEIRTLLDQSVRGMLSTFSRSFEGYPSGSLVD 120
           G DANS+EID+SKLIQAHQE AARL PAEEIRTLLDQSVRGMLSTFSRSFEGYPSGS VD
Sbjct: 61  GDDANSDEIDVSKLIQAHQEKAARLLPAEEIRTLLDQSVRGMLSTFSRSFEGYPSGSFVD 120

Query: 121 FACDADGTPVLAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLVVTLHGDVVSVSEEDRP 180
           FACDADGTP+LAVSSLAEHAKNLA NPKCSLLVAKEPEDRGTLVVT+HGD V VSEEDRP
Sbjct: 121 FACDADGTPILAVSSLAEHAKNLAANPKCSLLVAKEPEDRGTLVVTVHGDAVPVSEEDRP 180

Query: 181 AVRAAYLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELSGEEYKAAKVDPI 240
           AVRAAYLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELS EEYKAA+VDPI
Sbjct: 181 AVRAAYLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELSSEEYKAAQVDPI 240

Query: 241 AQFSKPVTSHMNRDHTEDTKIIVRHWTSIPVDSAIMLDLDSLGINVK 283
            QF+KPV SHMNRDHTEDTK+IVRHW+SIPVDSAIMLDLDSLG NVK
Sbjct: 241 VQFAKPVMSHMNRDHTEDTKMIVRHWSSIPVDSAIMLDLDSLGFNVK 287

[Close]

BLAST of MS017076 vs. ExPASy TrEMBL
Match: A0A6J1HMU8 (glutamyl-tRNA reductase-binding protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111466055 PE=4 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 2.1e-131
Identity = 248/287 (86.41%), Postives = 257/287 (89.55%), Query Frame = 0


Query: 1   MATVAPPSLIFKFRSPTAFNGRTAVHFPRSSTAFFNP----RTPFSMAASTESTSQTVAS 60
           MATV PPSL F+FR    FNGR    FPRS  + FNP    R PF M+ASTESTSQ VAS
Sbjct: 1   MATVTPPSLTFQFRPRNTFNGRIGFRFPRSLASSFNPRLRFRLPFLMSASTESTSQAVAS 60

Query: 61  G-DANSNEIDISKLIQAHQENAARLSPAEEIRTLLDQSVRGMLSTFSRSFEGYPSGSLVD 120
           G DANS+EIDISKLIQAHQE AARL PAEEIRTLLDQSVRGMLSTFSRSFEGYPSGS VD
Sbjct: 61  GDDANSDEIDISKLIQAHQEKAARLLPAEEIRTLLDQSVRGMLSTFSRSFEGYPSGSFVD 120

Query: 121 FACDADGTPVLAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLVVTLHGDVVSVSEEDRP 180
           FACDADGTP+LAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLVVT+HGD V VSEEDRP
Sbjct: 121 FACDADGTPILAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLVVTVHGDAVPVSEEDRP 180

Query: 181 AVRAAYLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELSGEEYKAAKVDPI 240
           AVRAAYLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELS EEYKA +VDPI
Sbjct: 181 AVRAAYLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELSSEEYKATQVDPI 240

Query: 241 AQFSKPVTSHMNRDHTEDTKIIVRHWTSIPVDSAIMLDLDSLGINVK 283
           AQF+KPV SHMNRDHTEDTK+IVRHWTSIPVDSAIMLDLDSLG NVK
Sbjct: 241 AQFAKPVMSHMNRDHTEDTKMIVRHWTSIPVDSAIMLDLDSLGFNVK 287

[Close]

BLAST of MS017076 vs. ExPASy TrEMBL
Match: A0A1S3B460 (glutamyl-tRNA reductase-binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485983 PE=4 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 8.1e-128
Identity = 241/284 (84.86%), Postives = 255/284 (89.79%), Query Frame = 0


Query: 1   MATVAPPSLIFKFRSPTAFNGRTAVHFPRSSTAFFNP--RTPFSMAASTESTSQTVASGD 60
           MAT+ PP+L F+  S TA NGR A HFPRS T+ FN   R P SMAAST+STSQ   SG 
Sbjct: 1   MATLTPPTLTFRICSHTALNGRIAFHFPRSLTSSFNHRLRLPLSMAASTDSTSQ-APSGY 60

Query: 61  ANSNEIDISKLIQAHQENAARLSPAEEIRTLLDQSVRGMLSTFSRSFEGYPSGSLVDFAC 120
           ANS++ID+SKLIQAHQE AARLSPAEEIRTLLDQSVRG LSTFSRSFEGYPSGS VDFAC
Sbjct: 61  ANSDDIDVSKLIQAHQEKAARLSPAEEIRTLLDQSVRGTLSTFSRSFEGYPSGSFVDFAC 120

Query: 121 DADGTPVLAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLVVTLHGDVVSVSEEDRPAVR 180
           DADGTP+LAVSSLAEHAKNL TNPKCSLLVAKEPEDRGTLVVTLHGD V+VSEEDRPAVR
Sbjct: 121 DADGTPILAVSSLAEHAKNLETNPKCSLLVAKEPEDRGTLVVTLHGDAVAVSEEDRPAVR 180

Query: 181 AAYLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELSGEEYKAAKVDPIAQF 240
           AAYLSKHPNAFWVDFGDF FVYIKP+VIRYVSG+ATASLGSGELSGEEY AA+VDPIAQF
Sbjct: 181 AAYLSKHPNAFWVDFGDFNFVYIKPRVIRYVSGIATASLGSGELSGEEYMAAQVDPIAQF 240

Query: 241 SKPVTSHMNRDHTEDTKIIVRHWTSIPVDSAIMLDLDSLGINVK 283
           +KPVTSHMNRDH EDTK IVRHWTSIPVDSAIMLDLDSLG NVK
Sbjct: 241 AKPVTSHMNRDHAEDTKNIVRHWTSIPVDSAIMLDLDSLGFNVK 283

[Close]

BLAST of MS017076 vs. ExPASy TrEMBL
Match: A0A6J1ITI7 (glutamyl-tRNA reductase-binding protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111478273 PE=4 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 1.1e-127
Identity = 243/286 (84.97%), Postives = 254/286 (88.81%), Query Frame = 0


Query: 1   MATVAPPSLIFKFRSPTAFNGRTAVHFPRSSTAFFNP--RTPFSMAASTESTSQTVASGD 60
           MATV P SL  +F S TA NGR A HFPRS  + FNP  R  FSMAASTESTSQ VASGD
Sbjct: 1   MATVVPHSLTLRFCSRTALNGRIASHFPRSLISSFNPRLRLSFSMAASTESTSQIVASGD 60

Query: 61  ANSNEIDISKLIQAHQENAAR--LSPAEEIRTLLDQSVRGMLSTFSRSFEGYPSGSLVDF 120
           ANS EID+SKLIQAHQE AAR  LSPAEEIRTL+DQ VRGMLSTFSR FEGYPSGS VDF
Sbjct: 61  ANSEEIDVSKLIQAHQEKAARLSLSPAEEIRTLMDQRVRGMLSTFSRRFEGYPSGSFVDF 120

Query: 121 ACDADGTPVLAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTLVVTLHGDVVSVSEEDRPA 180
           ACDADGTP+LAVSSLAEHAKNLATN KCSLLVAKEPEDRGTLVVTLHGD V+V EEDRPA
Sbjct: 121 ACDADGTPILAVSSLAEHAKNLATNSKCSLLVAKEPEDRGTLVVTLHGDAVAVPEEDRPA 180

Query: 181 VRAAYLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLGSGELSGEEYKAAKVDPIA 240
           VRAAYLSKHPNAFWVDFGDFQFVYIKPK+IRYV+GVATASL SGELS EEYKAA+VDP+A
Sbjct: 181 VRAAYLSKHPNAFWVDFGDFQFVYIKPKIIRYVTGVATASLRSGELSDEEYKAARVDPVA 240

Query: 241 QFSKPVTSHMNRDHTEDTKIIVRHWTSIPVDSAIMLDLDSLGINVK 283
           QFSKPVTSHMNRDH EDTK IVRHWTSIPVDSAIMLDLDSLG NV+
Sbjct: 241 QFSKPVTSHMNRDHAEDTKNIVRHWTSIPVDSAIMLDLDSLGFNVE 286

[Close]

BLAST of MS017076 vs. TAIR 10
Match: AT3G03890.1 (FMN binding )

HSP 1 Score: 347.1 bits (889), Expect = 1.4e-95
Identity = 172/244 (70.49%), Postives = 209/244 (85.66%), Query Frame = 0


Query: 39  TPFSMAASTESTSQTVASGDANSNEIDISKLIQAHQENAARLSPAEEIRTLLDQSVRGML 98
           +P +MA++ +S+SQ V+ G  NS + D+ KLIQAH+E AARLSP EEIRT+L+ S+ GML
Sbjct: 41  SPLTMASAAQSSSQAVSYGSGNS-DTDVFKLIQAHEEKAARLSPVEEIRTVLNGSICGML 100

Query: 99  STFSRSFEGYPSGSLVDFACDADGTPVLAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTL 158
           STFS+ +EGYPSGS+VDFACDADG+P+LAVSSLA H K+L  NPKCSLL+A++PEDR  L
Sbjct: 101 STFSQKYEGYPSGSMVDFACDADGSPILAVSSLAVHTKDLLANPKCSLLIARDPEDRTGL 160

Query: 159 VVTLHGDVVSVSEEDRPAVRAAYLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLG 218
            +TLHGD V VSE+D+ AVR+AYL+KHP AFWVDFGDF F+ I+PKV+RYVSGVATA LG
Sbjct: 161 RITLHGDAVLVSEKDQAAVRSAYLAKHPKAFWVDFGDFSFMRIEPKVVRYVSGVATAFLG 220

Query: 219 SGELSGEEYKAAKVDPIAQFSKPVTSHMNRDHTEDTKIIVRHWTSIPVDSAIMLDLDSLG 278
           SGE S EEY+AAKVDPIAQ++KPVTSHMN+DH EDTK IV + TSIPV+SA+MLDLDSLG
Sbjct: 221 SGEFSKEEYQAAKVDPIAQYAKPVTSHMNKDHEEDTKAIVHNITSIPVESALMLDLDSLG 280

Query: 279 INVK 283
            NVK
Sbjct: 281 FNVK 283

[Close]

BLAST of MS017076 vs. TAIR 10
Match: AT3G03890.2 (FMN binding )

HSP 1 Score: 347.1 bits (889), Expect = 1.4e-95
Identity = 172/244 (70.49%), Postives = 209/244 (85.66%), Query Frame = 0


Query: 39  TPFSMAASTESTSQTVASGDANSNEIDISKLIQAHQENAARLSPAEEIRTLLDQSVRGML 98
           +P +MA++ +S+SQ V+ G  NS + D+ KLIQAH+E AARLSP EEIRT+L+ S+ GML
Sbjct: 41  SPLTMASAAQSSSQAVSYGSGNS-DTDVFKLIQAHEEKAARLSPVEEIRTVLNGSICGML 100

Query: 99  STFSRSFEGYPSGSLVDFACDADGTPVLAVSSLAEHAKNLATNPKCSLLVAKEPEDRGTL 158
           STFS+ +EGYPSGS+VDFACDADG+P+LAVSSLA H K+L  NPKCSLL+A++PEDR  L
Sbjct: 101 STFSQKYEGYPSGSMVDFACDADGSPILAVSSLAVHTKDLLANPKCSLLIARDPEDRTGL 160

Query: 159 VVTLHGDVVSVSEEDRPAVRAAYLSKHPNAFWVDFGDFQFVYIKPKVIRYVSGVATASLG 218
            +TLHGD V VSE+D+ AVR+AYL+KHP AFWVDFGDF F+ I+PKV+RYVSGVATA LG
Sbjct: 161 RITLHGDAVLVSEKDQAAVRSAYLAKHPKAFWVDFGDFSFMRIEPKVVRYVSGVATAFLG 220

Query: 219 SGELSGEEYKAAKVDPIAQFSKPVTSHMNRDHTEDTKIIVRHWTSIPVDSAIMLDLDSLG 278
           SGE S EEY+AAKVDPIAQ++KPVTSHMN+DH EDTK IV + TSIPV+SA+MLDLDSLG
Sbjct: 221 SGEFSKEEYQAAKVDPIAQYAKPVTSHMNKDHEEDTKAIVHNITSIPVESALMLDLDSLG 280

Query: 279 INVK 283
            NVK
Sbjct: 281 FNVK 283

[Close]

BLAST of MS017076 vs. TAIR 10
Match: AT3G21140.1 (Pyridoxamine 5'-phosphate oxidase family protein )

HSP 1 Score: 87.0 bits (214), Expect = 2.6e-17
Identity = 66/209 (31.58%), Postives = 108/209 (51.67%), Query Frame = 0


Query: 82  PAEEIRTLLDQS----VRGMLSTFSRSFEGYPSGSLVDFACDADGTPVLAVSSLAEHAKN 141
           PA  +R LL+Q+    +  ++S      EGYP GSLVDFA D  G P+   S LA H +N
Sbjct: 143 PALAVRNLLEQARFAHLCTVMSKMHHRREGYPFGSLVDFAPDRMGHPIFLFSPLAIHTRN 202

Query: 142 LATNPKCSLLVAKEPEDRG--TLVVTLHGDVVSVSEEDRPAVRAAYLSKHPNAFWVDFGD 201
           L   P+CSL+V + P   G     VTL GDV  +SE+++      Y++KHP+     +G+
Sbjct: 203 LLNEPRCSLVV-QIPGWSGLSNARVTLFGDVYPLSEDEQEWAHKQYIAKHPHGPSEQWGN 262

Query: 202 FQFVYIKP-KVIRYVSGVATASLGSGELSGEEYKAAKVDPIA-QFSKPVTSHMNRDHTED 261
           F +  ++    I ++ G  T +     +  +EY+  + D IA    +     +N   ++ 
Sbjct: 263 FHYFRMQNISDIYFIGGFGTVAW----VDVKEYEGLQPDKIAVDGGERNLKELNAIFSKP 322

Query: 262 TKIIVRHWTSIPVDSAIMLDLDSLGINVK 283
            + ++   T   VD A ++ +DS GI+V+
Sbjct: 323 LRELLS--TESEVDDAALISIDSKGIDVR 344

[Close]

BLAST of MS017076 vs. TAIR 10
Match: AT1G51560.1 (Pyridoxamine 5'-phosphate oxidase family protein )

HSP 1 Score: 76.6 bits (187), Expect = 3.5e-14
Identity = 60/210 (28.57%), Postives = 102/210 (48.57%), Query Frame = 0


Query: 82  PAEEIRTLLDQS----VRGMLSTFSRSFEGYPSGSLVDFACDADGTPVLAVSSLAEHAKN 141
           PA  +R L++Q+    +  ++S      EGYP GSLVDFA D  G P+ + S LA H +N
Sbjct: 147 PALAVRNLMEQARFAHLCTVMSKMHHRREGYPFGSLVDFAPDPMGHPIFSFSPLAIHTRN 206

Query: 142 LATNPKCSLLVAKEP-EDRGTLVVTLHGDVVSVSEEDRPAVRAAYLSKH---PNAFWVDF 201
           +   P+C+L+V            VTL GDV  + EE +      Y+ KH   P+  W +F
Sbjct: 207 ILAEPRCTLVVQIPGWSCLSNARVTLFGDVYPLPEEQQEWAHKQYMLKHHQGPSQQWGNF 266

Query: 202 GDFQFVYIKPKVIRYVSGVATASLGSGELSGEEYKAAKVDPIA-QFSKPVTSHMNRDHTE 261
             F+   I    I ++ G  T +     ++  EY+  + D IA    +     +N   ++
Sbjct: 267 HYFRMQNISD--IYFIGGFGTVAW----INVNEYETLQPDKIAVDGGEQNLKELNAIFSK 326

Query: 262 DTKIIVRHWTSIPVDSAIMLDLDSLGINVK 283
             + ++   +   +D A ++ +DS GI+++
Sbjct: 327 PLRELLS--SEAELDDAAIISIDSKGIDIR 348

The following BLAST results are available for this feature:

BLAST of MS017076 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156249.1	5.2e-153	99.65	glutamyl-tRNA reductase-binding protein, chloroplastic [Momordica charantia]	[more]
XP_022925000.1	1.7e-132	86.76	glutamyl-tRNA reductase-binding protein, chloroplastic [Cucurbita moschata]	[more]
XP_038883739.1	8.6e-132	86.62	uncharacterized protein LOC120074631 isoform X1 [Benincasa hispida]	[more]
XP_023517122.1	1.9e-131	86.06	glutamyl-tRNA reductase-binding protein, chloroplastic-like [Cucurbita pepo subs...	[more]
XP_022966392.1	4.2e-131	86.41	glutamyl-tRNA reductase-binding protein, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of MS017076 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS017076 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DSV5	2.5e-153	99.65	glutamyl-tRNA reductase-binding protein, chloroplastic OS=Momordica charantia OX...	[more]
A0A6J1EGN2	8.3e-133	86.76	glutamyl-tRNA reductase-binding protein, chloroplastic OS=Cucurbita moschata OX=...	[more]
A0A6J1HMU8	2.1e-131	86.41	glutamyl-tRNA reductase-binding protein, chloroplastic-like OS=Cucurbita maxima ...	[more]
A0A1S3B460	8.1e-128	84.86	glutamyl-tRNA reductase-binding protein, chloroplastic OS=Cucumis melo OX=3656 G...	[more]
A0A6J1ITI7	1.1e-127	84.97	glutamyl-tRNA reductase-binding protein, chloroplastic-like OS=Cucurbita maxima ...	[more]

BLAST of MS017076 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G03890.1	1.4e-95	70.49	FMN binding	[more]
AT3G03890.2	1.4e-95	70.49	FMN binding	[more]
AT3G21140.1	2.6e-17	31.58	Pyridoxamine 5'-phosphate oxidase family protein	[more]
AT1G51560.1	3.5e-14	28.57	Pyridoxamine 5'-phosphate oxidase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037119	Haem oxygenase HugZ-like superfamily	GENE3D	3.20.180.10		coord: 229..282 e-value: 3.6E-11 score: 45.4
IPR012349	FMN-binding split barrel	GENE3D	2.30.110.10		coord: 59..220 e-value: 7.6E-39 score: 134.9
None	No IPR available	PFAM	PF13883	Pyrid_oxidase_2	coord: 83..210 e-value: 7.0E-14 score: 52.1
None	No IPR available	PANTHER	PTHR13343	CREG1 PROTEIN	coord: 33..282
None	No IPR available	PANTHER	PTHR13343:SF24	OS07G0573800 PROTEIN	coord: 33..282
None	No IPR available	SUPERFAMILY	50475	FMN-binding split barrel	coord: 83..281
IPR019595	Domain of unknown function DUF2470	PFAM	PF10615	DUF2470	coord: 240..282 e-value: 4.2E-7 score: 30.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS017076.1	MS017076.1	mRNA