MS017059 (gene) Bitter gourd (TR) v1

Overview


Name	MS017059
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ATP-dependent DNA helicase
Location	scaffold197: 1042125 .. 1045599 (-)
RNA-Seq Expression	MS017059
Synteny	MS017059

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGGTGAGAATGGAGATGACAGCACATTAAGTGAAGCCGGGAAAGTGGAAAATTTGGCTACTTTGAAGAGTGGACTTTCAGAGGTTTGTATGTTAAATGCTAATTCTTGAACATTCATGTGTCTCTCCTTGTTTTTTCTTGTCAGTCAAATCATATTCTGATCGGTAAATCATATTCTGATCGGTCCATTTGTATTATTTTTACCCAGGCTGAGGCTAAACTCTATCAAATGCTTTTAGAAGAGAGGATGAAGCTTGCTAGAAGAGCTGGAACTGCTCCGTAGGTTTTGTAAATACTTTTAAGTTGTTCATTATGAAAACTGGCACATTTCATCATCTTTTACGTGTTATTTATGTCGGTGGTTTATATGAAAATTTTTTCTTATATTTTATCCTTTGATACTTATTTTCTGCAGATATGCCATATGTGGCGACCAAACAGTTAAACGAATTGCATTAACTAGACCATCTACCAAGGCAAGGTTAGCAAATATTGATGGTGTGAACCAGGTATATCCCTCGCGAGGAAATGACTATATCTTCTTTAACTCACATGGATTTGAAGTTGTCAACACTATAGTTATGTGTGCTTATTTGGCATGTGTTACTCGGAAGTCTGCACCTCGTAAATGTGTTATCTCTCTACAAAATTCTTTGAATTTCAATGCATTTTTTTATCAAAATATTGTGTAATCCACTTTAATTCATTTAGATTTGGAGTTTGGCTGCATTTTCTTGCACGTTAGTCAGAATTAGTCACATTCAAGTTTTAGCTATTAGATTTTACCTAGCAAAAGTTGTGAGATTGTTGTTTGTTCTGTAAATGACATGGTTATTAGATAATTCAGTATGGGGAGAGTTAGCAGATCAATGTTAATGTTCCACAATAAAAAATTTTAGTTGCTTTTCTCTTTCAAAATGCTTTGAAACGTCACCAACTCACCAGAGCACGAGGCGGTGTCACTAGGTGACCATGTCAGATTTTTGTATTATCTTATTTTTATTTAAAAAACTTTTTTTTTTTGTAAGCTCAACCATAATAAAAAATGATGTTGAATTTTGAGCAATAAATTTTATGATCAAAATATTGAATTCATATATTAGATGATTGGAATAATTCTTGTTTGTATGCTAGGGGGGTGCACATTGATTATTGTCAAGCACTAGAATTAGATGATCTCTACTAGCATTTGATGGTCTCTTGGGATGTGCAATAAACACGCATAAAAGGCCGTATCACATCGAGATGTCGATTTATTTTTTGCCTCTAGTGAGATGGGGAATTAGTAACCCCCTCCTTGTCAAGTACCACTGATACAAATAATGCATCTTTAAGTGATTAGGCTGGGATGAAATTCGGACCAACAGTCTTCAGCTCATGGGCTATGTTTCCCCAGTTAACATTTGTCAATGATGGTCCAACTTTGAATTTTTTAGGTTTATTTGGATTTTAATGAGCTTGTAGGTATTATAGTTTTGATCATTCATACCAAAATAATGAATAAAGTTTTTAAAACTAAGTGATAATTTCATTGTTTTCTTATTGATAATTGGGGTACTACGAGTTCTCCTTGAATTATGCCATGGTTTACCCCTTCTAATCTCTAGGAAGGTTTTTCCCTCCTCAAGACTAGTTTCAGAAGATGATAATTGTTCACGTTAGTGTTAGAAATATTAGAGATATTATTAGGATATTAGAGGGACTCATTTGTCACTAATTGGAGTTATTAGTGAAATGTGTTGAAAATAGAGCGAGTTGGAGAGTTTGGAGGTAGGCAGAATTTGGAAGATTAATTTTGGGAGAATCCAGGCCTCTCGAAGTGCTTGTAGTATTGCAATTTTTATTTTATAAAGTAATATACTTTCAGAGTTGTTTTCTGTCAATTTCCATTGGAAAATCGGGTTCCTATCAGTTATTTAGTTTCAACCTGGAGCTTGTACCCAAGACCGGTAAATGTACTAAGTGTTTATTGAACTTCAATCACTACAGCACCTACTAAAGATGCATGGAGATCAAATTCTTCAAGCAGTGAATCATCTATCACAACAAGTTGGTCTTTCACTGGATGGAGAATGTAATGAAGAAGGAAATGGACAAGGTACTACAACAAGGAAACTCTATACAAACTCCAACCAACCGCGACAGTTGGCCCCGGCAAAGTTTGAAGCATGGAAAATGTGGCATGAAGATGGTCTATCTATCCAGAAAATTGCTGTAAGTAATCTCTTCTTCCCTATAAACCTTACTTACAACTTTGAATCAATCAAGAGCGTTGGAAATGCAGAATAGAACTTGGAATTTTAAGAATTTTTAGTTACTTTAGACCTGAATAAGTAGTTCAAGGACTATGATGTTTGCTGTATAAGTTACAACTGGTGCTAAAAAGCTAACTCGATGAAAGAAAGAGACTATTTAGAAAGTGAGCCTGAGTTAGACTTTTGAGCATTGTGTTTTTAAGTGAACCACTTTTCTATAAACATGTTTCAAAAACTTTAAAAGCAGTTTTTTGGTGAAACTAATGGAGGTGGATGCAAGTTTGCTCAGACACTCACATATATAAGAAAAGTAACTTTAACATGTATAAAGAATTTTCAAGATTATGTAACGAACACCATGAAAATTTGAGCACTTTTTACAATCTTGAAGTGATATATGTCAAGCTTATTGTTTTACTTCTATGTTTTTGTGACTATTCCTCTTTTCCCAGTTATTTACATTACTCTGATGACATCACTATTTGTTTGGAGAATAGAACTTCCCTGGTAGATCAGCCCCTATCAAAGAGACTACTGTTTCTGCGTATATTCTTGATGCAGTCCAGGAAGGATATGCAATTGACTGGAATAAATTCTGTGGTGAGATTGGACTTACAAGTCGGATATTTTCTGATATTCAAGCTGCTGTTTCGAAAGTCGGATCGGCAGAGAAGTTGAAGCCTATAAAAGATGAATTACCAGAGGAAGTGAGTTGGATATGTAAATTTCACCTTCTTCTATTGCTTTGTCTTATTTTTAAATATGACAGCAGCCATCCATGCCTTCAGATTCCTTGTTCCTTTTGTGCTTCTGCTAGTCAAATTTTCGACGAACGTCGGTGTATGACTGGAAATTGATATTTGGATGGCAGATAAATTACGCACACATCAAGGCTTGTCTTACAATGCAAAGCTGTGGAATATCCCCTGAGGGCAACCTAACCAGCAGCCACCAGGAAAGTAAAACCGACGAACCACTGAATGGTATGTCGAAGTTTTCAGGGAGTCCAACTTCAAAACAGCAGAAAGAAGAACCTTGTGCTATCGAAATGCCATCAAATAAAGGAACAACATTTATTCCTTCAACCGAGGAACTTCCCATAACATTAAAACGTCAGAAAGTCTGTGAAGTGCAGGAAGAAAGTCACATTCTAGCAAAAGCAACCGAGAGCTCGCTAGTAGAGTGGCTAAAGAACAACAACGACGGGGTATGTTTA

mRNA sequence

ATGATTGGTGAGAATGGAGATGACAGCACATTAAGTGAAGCCGGGAAAGTGGAAAATTTGGCTACTTTGAAGAGTGGACTTTCAGAGGCTGAGGCTAAACTCTATCAAATGCTTTTAGAAGAGAGGATGAAGCTTGCTAGAAGAGCTGGAACTGCTCCATATGCCATATGTGGCGACCAAACAGTTAAACGAATTGCATTAACTAGACCATCTACCAAGGCAAGGTTAGCAAATATTGATGGTGTGAACCAGCACCTACTAAAGATGCATGGAGATCAAATTCTTCAAGCAGTGAATCATCTATCACAACAAGTTGGTCTTTCACTGGATGGAGAATGTAATGAAGAAGGAAATGGACAAGGTACTACAACAAGGAAACTCTATACAAACTCCAACCAACCGCGACAGTTGGCCCCGGCAAAGTTTGAAGCATGGAAAATGTGGCATGAAGATGGTCTATCTATCCAGAAAATTGCTAACTTCCCTGGTAGATCAGCCCCTATCAAAGAGACTACTGTTTCTGCGTATATTCTTGATGCAGTCCAGGAAGGATATGCAATTGACTGGAATAAATTCTGTGGTGAGATTGGACTTACAAGTCGGATATTTTCTGATATTCAAGCTGCTGTTTCGAAAGTCGGATCGGCAGAGAAGTTGAAGCCTATAAAAGATGAATTACCAGAGGAAGTGAGTTGGATATCCATCCATGCCTTCAGATTCCTTGTTCCTTTTGTGCTTCTGCTAGTCAAATTTTCGACGACGTCGGTGTATGACTGGAAATTGATATTTGGATGGCAGATAAATTACGCACACATCAAGGCTTGTCTTACAATGCAAAGCTGTGGAATATCCCCTGAGGGCAACCTAACCAGCAGCCACCAGGAAAGTAAAACCGACGAACCACTGAATGGTATGTCGAAGTTTTCAGGGAGTCCAACTTCAAAACAGCAGAAAGAAGAACCTTGTGCTATCGAAATGCCATCAAATAAAGGAACAACATTTATTCCTTCAACCGAGGAACTTCCCATAACATTAAAACGTCAGAAAGTCTGTGAAGTGCAGGAAGAAAGTCACATTCTAGCAAAAGCAACCGAGAGCTCGCTAGTAGAGTGGCTAAAGAACAACAACGACGGGGTATGTTTA

Coding sequence (CDS)

ATGATTGGTGAGAATGGAGATGACAGCACATTAAGTGAAGCCGGGAAAGTGGAAAATTTGGCTACTTTGAAGAGTGGACTTTCAGAGGCTGAGGCTAAACTCTATCAAATGCTTTTAGAAGAGAGGATGAAGCTTGCTAGAAGAGCTGGAACTGCTCCATATGCCATATGTGGCGACCAAACAGTTAAACGAATTGCATTAACTAGACCATCTACCAAGGCAAGGTTAGCAAATATTGATGGTGTGAACCAGCACCTACTAAAGATGCATGGAGATCAAATTCTTCAAGCAGTGAATCATCTATCACAACAAGTTGGTCTTTCACTGGATGGAGAATGTAATGAAGAAGGAAATGGACAAGGTACTACAACAAGGAAACTCTATACAAACTCCAACCAACCGCGACAGTTGGCCCCGGCAAAGTTTGAAGCATGGAAAATGTGGCATGAAGATGGTCTATCTATCCAGAAAATTGCTAACTTCCCTGGTAGATCAGCCCCTATCAAAGAGACTACTGTTTCTGCGTATATTCTTGATGCAGTCCAGGAAGGATATGCAATTGACTGGAATAAATTCTGTGGTGAGATTGGACTTACAAGTCGGATATTTTCTGATATTCAAGCTGCTGTTTCGAAAGTCGGATCGGCAGAGAAGTTGAAGCCTATAAAAGATGAATTACCAGAGGAAGTGAGTTGGATATCCATCCATGCCTTCAGATTCCTTGTTCCTTTTGTGCTTCTGCTAGTCAAATTTTCGACGACGTCGGTGTATGACTGGAAATTGATATTTGGATGGCAGATAAATTACGCACACATCAAGGCTTGTCTTACAATGCAAAGCTGTGGAATATCCCCTGAGGGCAACCTAACCAGCAGCCACCAGGAAAGTAAAACCGACGAACCACTGAATGGTATGTCGAAGTTTTCAGGGAGTCCAACTTCAAAACAGCAGAAAGAAGAACCTTGTGCTATCGAAATGCCATCAAATAAAGGAACAACATTTATTCCTTCAACCGAGGAACTTCCCATAACATTAAAACGTCAGAAAGTCTGTGAAGTGCAGGAAGAAAGTCACATTCTAGCAAAAGCAACCGAGAGCTCGCTAGTAGAGTGGCTAAAGAACAACAACGACGGGGTATGTTTA

Protein sequence

MIGENGDDSTLSEAGKVENLATLKSGLSEAEAKLYQMLLEERMKLARRAGTAPYAICGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDQILQAVNHLSQQVGLSLDGECNEEGNGQGTTTRKLYTNSNQPRQLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVSAYILDAVQEGYAIDWNKFCGEIGLTSRIFSDIQAAVSKVGSAEKLKPIKDELPEEVSWISIHAFRFLVPFVLLLVKFSTTSVYDWKLIFGWQINYAHIKACLTMQSCGISPEGNLTSSHQESKTDEPLNGMSKFSGSPTSKQQKEEPCAIEMPSNKGTTFIPSTEELPITLKRQKVCEVQEESHILAKATESSLVEWLKNNNDGVCL

Homology

[Close]

BLAST of MS017059 vs. NCBI nr
Match: XP_022154482.1 (uncharacterized protein LOC111021754 isoform X1 [Momordica charantia])

HSP 1 Score: 654.8 bits (1688), Expect = 4.5e-184
Identity = 339/379 (89.45%), Postives = 340/379 (89.71%), Query Frame = 0


Query: 1   MIGENGDDSTLSEAGKVENLATLKSGLSEAEAKLYQMLLEERMKLARRAGTAPYAICGDQ 60
           MIGENGDDSTLSEAGKVENLATLKSGLSEAEAKLYQMLLEERMKLARRAGTAPYAICGDQ
Sbjct: 515 MIGENGDDSTLSEAGKVENLATLKSGLSEAEAKLYQMLLEERMKLARRAGTAPYAICGDQ 574

Query: 61  TVKRIALTRPSTKARLANIDGVNQHLLKMHGDQILQAVNHLSQQVGLSLDGECNEEGNGQ 120
           TVKRIALTRPSTKARLANIDGVNQHLLKMHGDQILQAVNHLSQQVGLSLDGECNEEGNGQ
Sbjct: 575 TVKRIALTRPSTKARLANIDGVNQHLLKMHGDQILQAVNHLSQQVGLSLDGECNEEGNGQ 634

Query: 121 GTTTRKLYTNSNQPRQLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVSAYILDA 180
           GTTTRKLYTNSNQPRQLAPAKFEAWKMWHEDGLSIQKI+NFPGRSAPIKETTVSAYILDA
Sbjct: 635 GTTTRKLYTNSNQPRQLAPAKFEAWKMWHEDGLSIQKISNFPGRSAPIKETTVSAYILDA 694

Query: 181 VQEGYAIDWNKFCGEIGLTSRIFSDIQAAVSKVGSAEKLKPIKDELPEEVSWISIHAFRF 240
           VQEGYAIDWNKFCGEIGLTSRIFSDIQAAVSKVGSAEKLKPIKDELPEE           
Sbjct: 695 VQEGYAIDWNKFCGEIGLTSRIFSDIQAAVSKVGSAEKLKPIKDELPEE----------- 754

Query: 241 LVPFVLLLVKFSTTSVYDWKLIFGWQINYAHIKACLTMQSCGISPEGNLTSSHQESKTDE 300
                                     INYAHIKACLTMQSCGISPEG LTSSHQESKTDE
Sbjct: 755 --------------------------INYAHIKACLTMQSCGISPEGTLTSSHQESKTDE 814

Query: 301 PLNGMSKFSGSPTSKQQKEEPCAIEMPSNKGTTFIPSTEELPITLKRQKVCEVQEESHIL 360
           PLNGMSKFSGSPTSKQQKEEPC IEMPSNKGTTFIPSTEELPITLKRQKVCEVQEESHIL
Sbjct: 815 PLNGMSKFSGSPTSKQQKEEPCDIEMPSNKGTTFIPSTEELPITLKRQKVCEVQEESHIL 856

Query: 361 AKATESSLVEWLKNNNDGV 380
           AKATESSLVEWLKNNNDGV
Sbjct: 875 AKATESSLVEWLKNNNDGV 856

[Close]

BLAST of MS017059 vs. NCBI nr
Match: XP_038883532.1 (ATP-dependent DNA helicase RecQ-like [Benincasa hispida])

HSP 1 Score: 516.9 bits (1330), Expect = 1.5e-142
Identity = 277/381 (72.70%), Postives = 295/381 (77.43%), Query Frame = 0


Query: 1   MIGENGDDSTLSEAGKVENLATLKSGLSEAEAKLYQMLLEERMKLARRAGTAPYAICGDQ 60
           MIGEN  DS LSE+GK+ENLATLKS LSEAE KL+QMLLEERMKLAR AGTAPYAICGDQ
Sbjct: 516 MIGENETDSALSESGKMENLATLKSELSEAEEKLFQMLLEERMKLARSAGTAPYAICGDQ 575

Query: 61  TVKRIALTRPSTKARLANIDGVNQHLLKMHGDQILQAVNHLSQQVGLSLDGECNEEGNGQ 120
           TVKRIALTRPSTKARLANIDGVNQHLLKMHGD ILQAV  LSQ+VGLSLDGE  EEGNGQ
Sbjct: 576 TVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILQAVKRLSQEVGLSLDGEYKEEGNGQ 635

Query: 121 GTTTRKLYTNSNQPRQLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVSAYILDA 180
           GTTTRK YT SNQ R LAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVS YILDA
Sbjct: 636 GTTTRKPYTESNQWRPLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVSGYILDA 695

Query: 181 VQEGYAIDWNKFCGEIGLTSRIFSDIQAAVSKVGSAEKLKPIKDELPEEVSWISIHAFRF 240
           VQEGYAIDW KFC EIGLT RIFS++Q+A+ KVGSAEKLK IKDELPEE           
Sbjct: 696 VQEGYAIDWTKFCDEIGLTCRIFSNVQSAIMKVGSAEKLKAIKDELPEE----------- 755

Query: 241 LVPFVLLLVKFSTTSVYDWKLIFGWQINYAHIKACLTMQSCGISPEGNLTSSHQESKTDE 300
                                     INYAHIKACL MQSCG+SPEG LT SHQ+ KTDE
Sbjct: 756 --------------------------INYAHIKACLVMQSCGMSPEGLLTGSHQDRKTDE 815

Query: 301 PLNGMSKFSGSPTSKQQKEEPCAIEMPSNKGTTFIPSTEELPITLKRQKVCEVQEESHIL 360
           P+NG S FSGSPTS  +KEEPC  E PSN         EE+ ++LKRQKVCE++EE  + 
Sbjct: 816 PMNGTSSFSGSPTSLPKKEEPCITETPSN-------GEEEISVSLKRQKVCELEEERRVP 851

Query: 361 AKATESSLVEWLKNNNDGVCL 382
            KATES LVEWLK NNDGV L
Sbjct: 876 VKATESLLVEWLK-NNDGVTL 851

[Close]

BLAST of MS017059 vs. NCBI nr
Match: KAG7027476.1 (recQ, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 496.5 bits (1277), Expect = 2.0e-136
Identity = 268/381 (70.34%), Postives = 291/381 (76.38%), Query Frame = 0


Query: 1   MIGENGDDSTLSEAGKVENLATLKSGLSEAEAKLYQMLLEERMKLARRAGTAPYAICGDQ 60
           MIGE+GDDSTL E G++ENL TLKSGLSEAEAKL+QMLL+ERMKLAR AGTAPYAICGD 
Sbjct: 402 MIGESGDDSTLIETGRMENLTTLKSGLSEAEAKLFQMLLDERMKLARSAGTAPYAICGDL 461

Query: 61  TVKRIALTRPSTKARLANIDGVNQHLLKMHGDQILQAVNHLSQQVGLSLDGECNEEGNGQ 120
           TVK+IALTRPSTKARLANIDGVNQHLLKMHGD ILQAV HLSQ+VGLSLDGEC E+GNGQ
Sbjct: 462 TVKKIALTRPSTKARLANIDGVNQHLLKMHGDLILQAVKHLSQEVGLSLDGECKEDGNGQ 521

Query: 121 GTTTRKLYTNSNQPRQLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVSAYILDA 180
            T+ RKL T SNQ R LAPAKFEAWKMW+EDGLSI KIANFPGRSAPIKETTVS YILDA
Sbjct: 522 CTSARKLNTESNQGRPLAPAKFEAWKMWYEDGLSIPKIANFPGRSAPIKETTVSGYILDA 581

Query: 181 VQEGYAIDWNKFCGEIGLTSRIFSDIQAAVSKVGSAEKLKPIKDELPEEVSWISIHAFRF 240
            QEGYAIDW KFC EIGLT  +FS IQ+AVSKVGS +KLK IKDELPEE           
Sbjct: 582 AQEGYAIDWTKFCDEIGLTCSLFSHIQSAVSKVGSTDKLKAIKDELPEE----------- 641

Query: 241 LVPFVLLLVKFSTTSVYDWKLIFGWQINYAHIKACLTMQSCGISPEGNLTSSHQESKTDE 300
                                     INYAHIKACL MQ CGISPE   T+  ++ KTDE
Sbjct: 642 --------------------------INYAHIKACLLMQKCGISPE---TTLPRDEKTDE 701

Query: 301 PLNGMSKFSGSPTSKQQKEEPCAIEMPSNKGTTFIPSTEELPITLKRQKVCEVQEESHIL 360
           P+N +  FSGSPTSKQQKEEP       N  T + PSTEE+PI+LKRQKVCE  EE+ + 
Sbjct: 702 PMNVVPNFSGSPTSKQQKEEP-------NVATAYNPSTEEIPISLKRQKVCESDEENRVP 734

Query: 361 AKATESSLVEWLKNNNDGVCL 382
            KATESSLVEWLK NNDGV L
Sbjct: 762 VKATESSLVEWLK-NNDGVTL 734

[Close]

BLAST of MS017059 vs. NCBI nr
Match: XP_023518743.1 (uncharacterized protein LOC111782167 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 491.9 bits (1265), Expect = 5.0e-135
Identity = 268/381 (70.34%), Postives = 288/381 (75.59%), Query Frame = 0


Query: 1   MIGENGDDSTLSEAGKVENLATLKSGLSEAEAKLYQMLLEERMKLARRAGTAPYAICGDQ 60
           MIGE+GDDST  EAG++ENL TLKSGLSEAEAKL+QMLL+ERMKLAR AGTAPYAICGD 
Sbjct: 556 MIGESGDDSTFIEAGRMENLTTLKSGLSEAEAKLFQMLLDERMKLARSAGTAPYAICGDL 615

Query: 61  TVKRIALTRPSTKARLANIDGVNQHLLKMHGDQILQAVNHLSQQVGLSLDGECNEEGNGQ 120
           TVK+IALTRPSTKARLANIDGVNQHLLKMHGD ILQAV HLSQ+VGLSLDGEC E+GNGQ
Sbjct: 616 TVKKIALTRPSTKARLANIDGVNQHLLKMHGDLILQAVRHLSQEVGLSLDGECKEDGNGQ 675

Query: 121 GTTTRKLYTNSNQPRQLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVSAYILDA 180
             T RKL T SNQ R LAPAKFEAWKMW+EDGLSI KIANFPGRSAPIKETTVS YILDA
Sbjct: 676 CMTARKLNTESNQGRPLAPAKFEAWKMWYEDGLSISKIANFPGRSAPIKETTVSGYILDA 735

Query: 181 VQEGYAIDWNKFCGEIGLTSRIFSDIQAAVSKVGSAEKLKPIKDELPEEVSWISIHAFRF 240
            QEGY IDW KFC EIGL+  IFSDIQ+AVSKVGS +KLK IKDELPEE           
Sbjct: 736 AQEGYTIDWTKFCDEIGLSCSIFSDIQSAVSKVGSTDKLKAIKDELPEE----------- 795

Query: 241 LVPFVLLLVKFSTTSVYDWKLIFGWQINYAHIKACLTMQSCGISPEGNLTSSHQESKTDE 300
                                     INYAHIKACL MQ CGISPE   T+  ++ KTDE
Sbjct: 796 --------------------------INYAHIKACLLMQKCGISPE---TTLPRDEKTDE 855

Query: 301 PLNGMSKFSGSPTSKQQKEEPCAIEMPSNKGTTFIPSTEELPITLKRQKVCEVQEESHIL 360
            +N + KFSGSPTSKQQKEEP       N  T   PSTEE PI+LKRQKVCE  EE+ + 
Sbjct: 856 RMNVVPKFSGSPTSKQQKEEP-------NVATACKPSTEETPISLKRQKVCESDEENRVP 888

Query: 361 AKATESSLVEWLKNNNDGVCL 382
            KATESSLVEWLK NNDGV L
Sbjct: 916 VKATESSLVEWLK-NNDGVTL 888

[Close]

BLAST of MS017059 vs. NCBI nr
Match: XP_022966161.1 (uncharacterized protein LOC111465921 [Cucurbita maxima])

HSP 1 Score: 491.9 bits (1265), Expect = 5.0e-135
Identity = 269/381 (70.60%), Postives = 288/381 (75.59%), Query Frame = 0


Query: 1   MIGENGDDSTLSEAGKVENLATLKSGLSEAEAKLYQMLLEERMKLARRAGTAPYAICGDQ 60
           MIGE+GDDSTL EAG++ENL   KSGLSEAEAKL+QMLL+ERMKLAR AGTAPYAICGD 
Sbjct: 558 MIGESGDDSTLIEAGRMENLT--KSGLSEAEAKLFQMLLDERMKLARSAGTAPYAICGDL 617

Query: 61  TVKRIALTRPSTKARLANIDGVNQHLLKMHGDQILQAVNHLSQQVGLSLDGECNEEGNGQ 120
           TVK+IALTRPSTKARLANIDGVNQHLLKMHGD ILQAV HLSQ+VGLSLDGEC E+GNGQ
Sbjct: 618 TVKKIALTRPSTKARLANIDGVNQHLLKMHGDLILQAVKHLSQEVGLSLDGECKEDGNGQ 677

Query: 121 GTTTRKLYTNSNQPRQLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVSAYILDA 180
            TT RKLYT SNQ R LAPAKFEAWKMW+EDGLSI KIANFPGRSAPIKETTVS YILDA
Sbjct: 678 CTTARKLYTESNQGRPLAPAKFEAWKMWYEDGLSIPKIANFPGRSAPIKETTVSGYILDA 737

Query: 181 VQEGYAIDWNKFCGEIGLTSRIFSDIQAAVSKVGSAEKLKPIKDELPEEVSWISIHAFRF 240
            QEGY IDW KFC EIGLT  IFSDIQ+AVSKVGS +KLK IKDELPEE+S         
Sbjct: 738 AQEGYTIDWTKFCDEIGLTCSIFSDIQSAVSKVGSTDKLKAIKDELPEEIS--------- 797

Query: 241 LVPFVLLLVKFSTTSVYDWKLIFGWQINYAHIKACLTMQSCGISPEGNLTSSHQESKTDE 300
                                       YAHIKACL MQ CGISPE  L    ++ KTDE
Sbjct: 798 ----------------------------YAHIKACLLMQKCGISPESTLP---RDEKTDE 857

Query: 301 PLNGMSKFSGSPTSKQQKEEPCAIEMPSNKGTTFIPSTEELPITLKRQKVCEVQEESHIL 360
           P+N + KFSGSPTSKQQKEEP       N      PSTEE+PI+LKRQKVCE  EE+ I 
Sbjct: 858 PMNVVPKFSGSPTSKQQKEEP-------NVAAACNPSTEEIPISLKRQKVCESDEENRIP 888

Query: 361 AKATESSLVEWLKNNNDGVCL 382
            KAT SSLVEWLK NNDGV L
Sbjct: 918 VKATVSSLVEWLK-NNDGVTL 888

[Close]

BLAST of MS017059 vs. ExPASy TrEMBL
Match: A0A6J1DLT4 (ATP-dependent DNA helicase OS=Momordica charantia OX=3673 GN=LOC111021754 PE=3 SV=1)

HSP 1 Score: 654.8 bits (1688), Expect = 2.2e-184
Identity = 339/379 (89.45%), Postives = 340/379 (89.71%), Query Frame = 0


Query: 1   MIGENGDDSTLSEAGKVENLATLKSGLSEAEAKLYQMLLEERMKLARRAGTAPYAICGDQ 60
           MIGENGDDSTLSEAGKVENLATLKSGLSEAEAKLYQMLLEERMKLARRAGTAPYAICGDQ
Sbjct: 515 MIGENGDDSTLSEAGKVENLATLKSGLSEAEAKLYQMLLEERMKLARRAGTAPYAICGDQ 574

Query: 61  TVKRIALTRPSTKARLANIDGVNQHLLKMHGDQILQAVNHLSQQVGLSLDGECNEEGNGQ 120
           TVKRIALTRPSTKARLANIDGVNQHLLKMHGDQILQAVNHLSQQVGLSLDGECNEEGNGQ
Sbjct: 575 TVKRIALTRPSTKARLANIDGVNQHLLKMHGDQILQAVNHLSQQVGLSLDGECNEEGNGQ 634

Query: 121 GTTTRKLYTNSNQPRQLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVSAYILDA 180
           GTTTRKLYTNSNQPRQLAPAKFEAWKMWHEDGLSIQKI+NFPGRSAPIKETTVSAYILDA
Sbjct: 635 GTTTRKLYTNSNQPRQLAPAKFEAWKMWHEDGLSIQKISNFPGRSAPIKETTVSAYILDA 694

Query: 181 VQEGYAIDWNKFCGEIGLTSRIFSDIQAAVSKVGSAEKLKPIKDELPEEVSWISIHAFRF 240
           VQEGYAIDWNKFCGEIGLTSRIFSDIQAAVSKVGSAEKLKPIKDELPEE           
Sbjct: 695 VQEGYAIDWNKFCGEIGLTSRIFSDIQAAVSKVGSAEKLKPIKDELPEE----------- 754

Query: 241 LVPFVLLLVKFSTTSVYDWKLIFGWQINYAHIKACLTMQSCGISPEGNLTSSHQESKTDE 300
                                     INYAHIKACLTMQSCGISPEG LTSSHQESKTDE
Sbjct: 755 --------------------------INYAHIKACLTMQSCGISPEGTLTSSHQESKTDE 814

Query: 301 PLNGMSKFSGSPTSKQQKEEPCAIEMPSNKGTTFIPSTEELPITLKRQKVCEVQEESHIL 360
           PLNGMSKFSGSPTSKQQKEEPC IEMPSNKGTTFIPSTEELPITLKRQKVCEVQEESHIL
Sbjct: 815 PLNGMSKFSGSPTSKQQKEEPCDIEMPSNKGTTFIPSTEELPITLKRQKVCEVQEESHIL 856

Query: 361 AKATESSLVEWLKNNNDGV 380
           AKATESSLVEWLKNNNDGV
Sbjct: 875 AKATESSLVEWLKNNNDGV 856

[Close]

BLAST of MS017059 vs. ExPASy TrEMBL
Match: A0A6J1HNL0 (ATP-dependent DNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111465921 PE=3 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 2.4e-135
Identity = 269/381 (70.60%), Postives = 288/381 (75.59%), Query Frame = 0


Query: 1   MIGENGDDSTLSEAGKVENLATLKSGLSEAEAKLYQMLLEERMKLARRAGTAPYAICGDQ 60
           MIGE+GDDSTL EAG++ENL   KSGLSEAEAKL+QMLL+ERMKLAR AGTAPYAICGD 
Sbjct: 558 MIGESGDDSTLIEAGRMENLT--KSGLSEAEAKLFQMLLDERMKLARSAGTAPYAICGDL 617

Query: 61  TVKRIALTRPSTKARLANIDGVNQHLLKMHGDQILQAVNHLSQQVGLSLDGECNEEGNGQ 120
           TVK+IALTRPSTKARLANIDGVNQHLLKMHGD ILQAV HLSQ+VGLSLDGEC E+GNGQ
Sbjct: 618 TVKKIALTRPSTKARLANIDGVNQHLLKMHGDLILQAVKHLSQEVGLSLDGECKEDGNGQ 677

Query: 121 GTTTRKLYTNSNQPRQLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVSAYILDA 180
            TT RKLYT SNQ R LAPAKFEAWKMW+EDGLSI KIANFPGRSAPIKETTVS YILDA
Sbjct: 678 CTTARKLYTESNQGRPLAPAKFEAWKMWYEDGLSIPKIANFPGRSAPIKETTVSGYILDA 737

Query: 181 VQEGYAIDWNKFCGEIGLTSRIFSDIQAAVSKVGSAEKLKPIKDELPEEVSWISIHAFRF 240
            QEGY IDW KFC EIGLT  IFSDIQ+AVSKVGS +KLK IKDELPEE+S         
Sbjct: 738 AQEGYTIDWTKFCDEIGLTCSIFSDIQSAVSKVGSTDKLKAIKDELPEEIS--------- 797

Query: 241 LVPFVLLLVKFSTTSVYDWKLIFGWQINYAHIKACLTMQSCGISPEGNLTSSHQESKTDE 300
                                       YAHIKACL MQ CGISPE  L    ++ KTDE
Sbjct: 798 ----------------------------YAHIKACLLMQKCGISPESTLP---RDEKTDE 857

Query: 301 PLNGMSKFSGSPTSKQQKEEPCAIEMPSNKGTTFIPSTEELPITLKRQKVCEVQEESHIL 360
           P+N + KFSGSPTSKQQKEEP       N      PSTEE+PI+LKRQKVCE  EE+ I 
Sbjct: 858 PMNVVPKFSGSPTSKQQKEEP-------NVAAACNPSTEEIPISLKRQKVCESDEENRIP 888

Query: 361 AKATESSLVEWLKNNNDGVCL 382
            KAT SSLVEWLK NNDGV L
Sbjct: 918 VKATVSSLVEWLK-NNDGVTL 888

[Close]

BLAST of MS017059 vs. ExPASy TrEMBL
Match: A0A5A7TI77 (ATP-dependent DNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G001150 PE=3 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 3.5e-134
Identity = 265/381 (69.55%), Postives = 288/381 (75.59%), Query Frame = 0


Query: 1   MIGENGDDSTLSEAGKVENLATLKSGLSEAEAKLYQMLLEERMKLARRAGTAPYAICGDQ 60
           +IGEN DDS L+EAGK++NLATLKSGLSEAE KL+Q+LLEERMKLAR AGTAPYA+CGDQ
Sbjct: 391 LIGENEDDSALTEAGKMDNLATLKSGLSEAEEKLFQLLLEERMKLARSAGTAPYAVCGDQ 450

Query: 61  TVKRIALTRPSTKARLANIDGVNQHLLKMHGDQILQAVNHLSQQVGLSLDGECNEEGNGQ 120
           TVKRIALTRPSTKARLANIDGVNQHLLKMHGD IL+AV  LSQQV LSLDGE  EEGNGQ
Sbjct: 451 TVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKLLSQQVSLSLDGEYREEGNGQ 510

Query: 121 GTTTRKLYTNSNQPRQLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVSAYILDA 180
           GTTTRKLYT  NQ R LAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTV  YI+DA
Sbjct: 511 GTTTRKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVCGYIVDA 570

Query: 181 VQEGYAIDWNKFCGEIGLTSRIFSDIQAAVSKVGSAEKLKPIKDELPEEVSWISIHAFRF 240
           VQEGY IDW KFC EIGLT RIFS+IQ+AV+KVGSAEKLK IKDELPEE           
Sbjct: 571 VQEGYEIDWTKFCNEIGLTCRIFSNIQSAVTKVGSAEKLKAIKDELPEE----------- 630

Query: 241 LVPFVLLLVKFSTTSVYDWKLIFGWQINYAHIKACLTMQSCGISPEGNLTSSHQESKTDE 300
                                     INYAHIKACL MQSCG+SPEG       + KTDE
Sbjct: 631 --------------------------INYAHIKACLVMQSCGMSPEG------LDRKTDE 690

Query: 301 PLNGMSKFSGSPTSKQQKEEPCAIEMPSNKGTTFIPSTEELPITLKRQKVCEVQEESHIL 360
           P+ G S  SGSPTS ++KEEPC IE PSN         EE+ ++LKRQKV E +EE  + 
Sbjct: 691 PMIGASLLSGSPTSIKKKEEPCVIETPSN-------GEEEISVSLKRQKVRESEEERQVP 720

Query: 361 AKATESSLVEWLKNNNDGVCL 382
            KATES L+EWLK NNDGV L
Sbjct: 751 VKATESLLIEWLK-NNDGVTL 720

[Close]

BLAST of MS017059 vs. ExPASy TrEMBL
Match: A0A1S3B4Q2 (ATP-dependent DNA helicase OS=Cucumis melo OX=3656 GN=LOC103486004 PE=3 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 3.5e-134
Identity = 265/381 (69.55%), Postives = 288/381 (75.59%), Query Frame = 0


Query: 1   MIGENGDDSTLSEAGKVENLATLKSGLSEAEAKLYQMLLEERMKLARRAGTAPYAICGDQ 60
           +IGEN DDS L+EAGK++NLATLKSGLSEAE KL+Q+LLEERMKLAR AGTAPYA+CGDQ
Sbjct: 515 LIGENEDDSALTEAGKMDNLATLKSGLSEAEEKLFQLLLEERMKLARSAGTAPYAVCGDQ 574

Query: 61  TVKRIALTRPSTKARLANIDGVNQHLLKMHGDQILQAVNHLSQQVGLSLDGECNEEGNGQ 120
           TVKRIALTRPSTKARLANIDGVNQHLLKMHGD IL+AV  LSQQV LSLDGE  EEGNGQ
Sbjct: 575 TVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKLLSQQVSLSLDGEYREEGNGQ 634

Query: 121 GTTTRKLYTNSNQPRQLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVSAYILDA 180
           GTTTRKLYT  NQ R LAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTV  YI+DA
Sbjct: 635 GTTTRKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVCGYIVDA 694

Query: 181 VQEGYAIDWNKFCGEIGLTSRIFSDIQAAVSKVGSAEKLKPIKDELPEEVSWISIHAFRF 240
           VQEGY IDW KFC EIGLT RIFS+IQ+AV+KVGSAEKLK IKDELPEE           
Sbjct: 695 VQEGYEIDWTKFCNEIGLTCRIFSNIQSAVTKVGSAEKLKAIKDELPEE----------- 754

Query: 241 LVPFVLLLVKFSTTSVYDWKLIFGWQINYAHIKACLTMQSCGISPEGNLTSSHQESKTDE 300
                                     INYAHIKACL MQSCG+SPEG       + KTDE
Sbjct: 755 --------------------------INYAHIKACLVMQSCGMSPEG------LDRKTDE 814

Query: 301 PLNGMSKFSGSPTSKQQKEEPCAIEMPSNKGTTFIPSTEELPITLKRQKVCEVQEESHIL 360
           P+ G S  SGSPTS ++KEEPC IE PSN         EE+ ++LKRQKV E +EE  + 
Sbjct: 815 PMIGASLLSGSPTSIKKKEEPCVIETPSN-------GEEEISVSLKRQKVRESEEERQVP 844

Query: 361 AKATESSLVEWLKNNNDGVCL 382
            KATES L+EWLK NNDGV L
Sbjct: 875 VKATESLLIEWLK-NNDGVTL 844

[Close]

BLAST of MS017059 vs. ExPASy TrEMBL
Match: A0A1S3B4R4 (ATP-dependent DNA helicase OS=Cucumis melo OX=3656 GN=LOC103486004 PE=3 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 3.5e-134
Identity = 265/381 (69.55%), Postives = 288/381 (75.59%), Query Frame = 0


Query: 1   MIGENGDDSTLSEAGKVENLATLKSGLSEAEAKLYQMLLEERMKLARRAGTAPYAICGDQ 60
           +IGEN DDS L+EAGK++NLATLKSGLSEAE KL+Q+LLEERMKLAR AGTAPYA+CGDQ
Sbjct: 391 LIGENEDDSALTEAGKMDNLATLKSGLSEAEEKLFQLLLEERMKLARSAGTAPYAVCGDQ 450

Query: 61  TVKRIALTRPSTKARLANIDGVNQHLLKMHGDQILQAVNHLSQQVGLSLDGECNEEGNGQ 120
           TVKRIALTRPSTKARLANIDGVNQHLLKMHGD IL+AV  LSQQV LSLDGE  EEGNGQ
Sbjct: 451 TVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKLLSQQVSLSLDGEYREEGNGQ 510

Query: 121 GTTTRKLYTNSNQPRQLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVSAYILDA 180
           GTTTRKLYT  NQ R LAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTV  YI+DA
Sbjct: 511 GTTTRKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTVCGYIVDA 570

Query: 181 VQEGYAIDWNKFCGEIGLTSRIFSDIQAAVSKVGSAEKLKPIKDELPEEVSWISIHAFRF 240
           VQEGY IDW KFC EIGLT RIFS+IQ+AV+KVGSAEKLK IKDELPEE           
Sbjct: 571 VQEGYEIDWTKFCNEIGLTCRIFSNIQSAVTKVGSAEKLKAIKDELPEE----------- 630

Query: 241 LVPFVLLLVKFSTTSVYDWKLIFGWQINYAHIKACLTMQSCGISPEGNLTSSHQESKTDE 300
                                     INYAHIKACL MQSCG+SPEG       + KTDE
Sbjct: 631 --------------------------INYAHIKACLVMQSCGMSPEG------LDRKTDE 690

Query: 301 PLNGMSKFSGSPTSKQQKEEPCAIEMPSNKGTTFIPSTEELPITLKRQKVCEVQEESHIL 360
           P+ G S  SGSPTS ++KEEPC IE PSN         EE+ ++LKRQKV E +EE  + 
Sbjct: 691 PMIGASLLSGSPTSIKKKEEPCVIETPSN-------GEEEISVSLKRQKVRESEEERQVP 720

Query: 361 AKATESSLVEWLKNNNDGVCL 382
            KATES L+EWLK NNDGV L
Sbjct: 751 VKATESLLIEWLK-NNDGVTL 720

The following BLAST results are available for this feature:

BLAST of MS017059 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154482.1	4.5e-184	89.45	uncharacterized protein LOC111021754 isoform X1 [Momordica charantia]	[more]
XP_038883532.1	1.5e-142	72.70	ATP-dependent DNA helicase RecQ-like [Benincasa hispida]	[more]
KAG7027476.1	2.0e-136	70.34	recQ, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023518743.1	5.0e-135	70.34	uncharacterized protein LOC111782167 [Cucurbita pepo subsp. pepo]	[more]
XP_022966161.1	5.0e-135	70.60	uncharacterized protein LOC111465921 [Cucurbita maxima]	[more]

BLAST of MS017059 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS017059 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DLT4	2.2e-184	89.45	ATP-dependent DNA helicase OS=Momordica charantia OX=3673 GN=LOC111021754 PE=3 S...	[more]
A0A6J1HNL0	2.4e-135	70.60	ATP-dependent DNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111465921 PE=3 SV=1	[more]
A0A5A7TI77	3.5e-134	69.55	ATP-dependent DNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3B4Q2	3.5e-134	69.55	ATP-dependent DNA helicase OS=Cucumis melo OX=3656 GN=LOC103486004 PE=3 SV=1	[more]
A0A1S3B4R4	3.5e-134	69.55	ATP-dependent DNA helicase OS=Cucumis melo OX=3656 GN=LOC103486004 PE=3 SV=1	[more]

BLAST of MS017059 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002121	HRDC domain	SMART	SM00341	hrdc7	coord: 28..108 e-value: 0.0053 score: 26.0
IPR002121	HRDC domain	PFAM	PF00570	HRDC	coord: 32..98 e-value: 1.9E-14 score: 53.4
IPR002121	HRDC domain	PROSITE	PS50967	HRDC	coord: 28..108 score: 18.28475
IPR029491	Helicase Helix-turn-helix domain	PFAM	PF14493	HTH_40	coord: 143..238 e-value: 1.6E-16 score: 60.5
IPR044876	HRDC domain superfamily	GENE3D	1.10.150.80	HRDC domain	coord: 27..110 e-value: 8.6E-17 score: 62.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 287..321
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 287..318
None	No IPR available	PANTHER	PTHR13710:SF120	WERNER SYNDROME ATP-DEPENDENT HELICASE	coord: 22..228
None	No IPR available	PANTHER	PTHR13710	DNA HELICASE RECQ FAMILY MEMBER	coord: 22..228
IPR010997	HRDC-like superfamily	SUPERFAMILY	47819	HRDC-like	coord: 25..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS017059.1	MS017059.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding