MS017042 (gene) Bitter gourd (TR) v1

Overview


Name	MS017042
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	cleavage stimulation factor subunit 77
Location	scaffold197: 840176 .. 853417 (-)
RNA-Seq Expression	MS017042
Synteny	MS017042

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTATAAATAACGACGATGCTACAAAACAGATATTTAGCCGGTGTTTATTGAACTGTCTTCACATTCCTCTTTGGTATAATCCTTGTTTCACCTATTAGTTATTACTTATTAGCTGATGAATCTCATGTTCCTATGGTATGGAGGATGGTGCATCGTTGTCTAAATTGATTACCATGTTTAGCAAATCAAAATCTTGAGATGGTTATTATAAAATTATAAGCCCGACCAGTGACTTGACAGAATGGAGTGAGTTTTGGACAATTCCAAAGCCCAGTCTTGCAATCTCTTCTGGTTTCTAACTAATAGAGACACCTTTCTCAATACTAATCTTTTCATCATGATGCAAGGCGATTGTAAGTGAATCAAAATTTGTATTTGGATCATAAACAATGGGAAGGATTAGCATCTCCTATCTCCTAGCTATCTTATCATGTGTAGAAGAAGCTTGGAAGTTTCCACCACTGGCAGGGTCTCTCCAATCCTTTGGAACTCTGCTTCAGTTAGCTTATGTTGGTGCTTCCCAAAATACATCCAGCAGTGTATTGACGACCTCTCTTGTGGTCATCTCTTCAAGCTCATGGTTTTGTGGGATTATGCTGTTAAAGCTACAATATGAGAAGTGTGGATGGGAAATAACCATAAACTTTGTCAGTAGAAATCTAGAAGTGAGGAGATTTGGGAGATGATCAAATTTAAAGTTCCCTTATGGAGCTTTTCTCCAAAAACTCATGTAACTATGACCCTTTTTTGATTAATGCCAACTGGAAGTCCCCTCTCTCCTCTTTATATATATATTTTAATTTCTTTGTGTAATCTAGTGGCTTTGTTTGGGATGATTTGTCATCTCCAGCTGTATTTATTCTTATCCTTCTTCTTTATTTCTTTTTAAAGAAACATAATTTTTCATTGATGGAATGAAAAATTACACCTCAGTGTTGAAAGAAAACCTTCAAAACACAGAAAAACATGAATATAAGTCCTATAAATTATAACTTAAGATCAACTTAAAGGCCTAGTTGGAACTGGTTGTGTCATTTTTTATTTGGAGGACCTAATTGTCCCTGGTAGTGGGTCTGATTAATGGTTAATATATTGGCATATATGCTTTTTAGTTAATTAAAAAATATTGATTTTGGATGACATGTTATATAGTTACATATCAGAAGTAACTATGCTGATTTCTTTAATTGTTTATAACAGTGGGTTTAAGTTGCCTGTTTTGTTCCAAGTATTGAACCAGTAAAAAAAGTACATATGCATGATTCAGATTATTATCATTTTTTATCGAGTTAATCTTTGGTGCTCTTTTCTGCATGGCCTTTTTATTTTATTTTTTTAAAAAGACACGAATGCGCCGGACACTCACGGATATAAAAAAAAAAACAAGACACAAAATTTTCATTGATGAATGAAAGTAATCAAACAAGTTTAGAGATACAAACTCCCAAAGGAGCGAAAAGAAAAACAAAAAAAAAAAAGGAAAAAAACAAGGAAAAAGACAAGATGCTAAGAGGAGAAAATAAAGAACAAGGAAAAAGACGATGCATGACCTTTTTAATGAGAAGACCTTTTGACTCTCTCAGCTTCCTTTCTGGTAGCTAAATGGAAGAATTTGCTTCTGCTTCTTACTTTTGTTATCTAGGCGTTGCTACATCCGATTCATCAAGAAGGTCAATGAAAGGAAAGGGATGGAAGGCCAGGAGGAAACTAGAAAAGCTTTTGATTTTATGCTCAGCTATCTTGGTGATCTTCTATAAGAGTTTTTTCTTTCCAAAACTTTTACTTTATTTTTTCAGCTCTTTGTTTCACATTTATGCTTTTAGACTTGTCTTAGGCTTCATTGATATTTATCTAATAGAATGACGGTGTCAAGTCAACAATAGGTGCGATCATGCTTCTTACATTAGGACATTGATTAGTGATTAGTGATTACTCAGAGTATCTAATGGTAACTATTGCATATGCTACTAGGTGTTGACATAGCATCTGGCCCTGTATGGATGGAATACATTGCCTTTTTAAAGTCACTGCCGGTTTGTAGAGCTTTTATATCATACATTTCTTATCAACTTTTAATAATGAGTTTGGTGGTTTGTTAATATTATAGATAATTTCTGTCCAGTTTGTGTGATTGTATAGGCTCTAAGCTCACAGGAGGAGTCGCAACGTATGACTGCAGTGAGGAAGGTCTACCAGAAAGCTATTATTACTCCTACCCATCACATTGAGCAACTGTGGAGGGATTATGAAAATTTTGAGAATTCTGTCAGCCGTCAACTGGCAAGTCACCTTCATCTTTTGTCTCAATCATGATTTTTTCTGTTGATCTTAGCTGCAAGTGCATTTATATGTTAGATTTATGGTCTTATGTTCCAGATGAATGAAAAACTACCTATATTTTGTGTGCTGTGTGTGTATACATAAATTTTCTTTCCACAGTAAACACAATTGACGTTATTTTCTGGAGCAGGCGAAGGGACTAATATCTGAATATCAACCAAAATTTAACAGTGCTCGGGCTGTCTATAGGGAGAGGAAGAAGTATGTTGATGAGATTGATTGTAACATACTTGCTGTACCACCAACTGGCTCTCCAAAGGCAATTACTTTTCCTTCTTATGATATATGATTGGCGGCCATATGTTTCTTTTTTTTTTGAACAGGAAACGAACTTTTCATTGATAAATGAAAAGGAACTTTTCATTGGCGGCCATATGTTTCTGTTGTTCAAGCATGTGACTGGTACACGTGACGTGATTGCATGTTAAAGGAAGCTGCAACTATGTCTTCTTTGTTTTTGGGGGTTTTCCCGTCTCTTGCTCTTTTTATCTTGTTATTATACAATAGTGTGAAATTGAGTGTCATGAGATTCTCACCAAATGGTTGTTTACATTGGATATTATATTTTCTACATGTTGTCAATTGTGTTTTTTGGTAAATTAAGAACTAAGGTCAAAGTTGATGTGGATATTAAGTTTATGTATTCACACCAATCGATCTCAGTTATTGTCATTATTATTTTTGCTTAAAATCTTATTTTCTAATTATGCTTTCAAAGAGTAATTGAATGAAGCCTTTTCTAGATCTCTGCATATTTTCATTTGTTTTGGAATCTCCTTATGTTCGCCCTTCTTTTACATTGAATTTTTTACAAGCTAAATGAATGGAACCTATCATGTTTGATTGTTAGATCTTAGATATGCCCCTCCAGGGAATTACAAATGTGTGGTAGATTCATTATGTCGATTGTGATCATTGGCTGGGTGATTTCATGTTAAATGCACTGCTTTGCTTTCATCTTTGCAAATATGTGATATACTCTGGTAAGGCTATATCGAAGCGTCCAACATATGAGCACTGAAGTTCTCCAGGTATTTAAATTTTGATCTCACAGGAAGAGCTGCAATGGATGTCATGGAAGAGGCTAATAGTGTTCGAGAAGTAAGAATTTCTGCCTTAGGTGTTTGTTTCTTTGGTCTGCACTGAAAATGATTGGTGTCACTCGATTATTTGTGTCGTTTGAGACATGCATCCTATATTCTCATTCTCCTAGTTTATGTTTTTAACGTTTTTGATGATGATTGATTGCCTTGATGGTCCTCCTGGAAAATTGATTATTAAATATGTTTCCACATTTGTTACTATGGAATAATAAACTTTTGGGTATCTCTTGACATATACAGAACATAGTTGACGTTTGGTATCTCCTTTACTATTGTGTTATCTCATGTTACAATGAAACTGGAGTGTCCAGACAAGAAGAAGGAAGAAGGCCTTTTGTTTTGCATTAGCATTTTAACTACAGCATCATCTACCCGAACTCGTTGACTTCTAGTTTTTTTGTTTTATTATTTATTTATTTATTTATTTATTTATTCCTGTCTGATGATACCCGCATTTGAGCGCCTTCTCGTACTTTTGGCTGTAAATATTAACTTGAATAGACAAATTATCATTTTTGTGTGTAAAATGAATCTTCTGTTATTGTTGTTTATCATTTGCATTGAAATTATATTCTGGTCTTTAAACTAATTTTAATTTTATGTGATCTAATTTCAGAGGAAATCCCCAGAGGATAGACAGCGCATCATCCAACAAACGGATTATATTCACATATGAGCAGGTAGATTTAAAATTATTAATATGCACAGGGGGGTTACGTGTCTTTTATGGGTTATTAAGGACACTCGTTTATTGATGATTTATAATTTATACATTATCATCCTCATGTAGCAGCAAACTGAAGCAGTGAGACTTGTGTCAACCTTAAGTGGAGTTTACTTTTTAGTAACATGATTTGAGGATGGGGTGGGTTGGATTAGATTAGGTTAAGAGAAGGTTGAATATATTTCAATATCAGTGATTCTTTGTTTGTTTACGGATGTAGAATATATTCCTATATAACTCTTACAATCTTTTCTACAATTACCGTTGTGTAGTTGTATCAAAAGATTTATCAGACTTAGTAGTTTAAGAGTTACCTTTTCCTATGGTTAACTTGAGGGTAATTCTGTACATGTAAATTAGCAGGATAACCCATATAAAAGGGGCCATGCTATTTGTAATAGCTACCACGTTTTTATGCTTAATAACACGTCTCTTTAAGTTACTGTATTTAAGTACATTAAATGGCTTCATCAACATCCGCTTCCCGAAAAATAAATTGAACCTCAAGCTGATGTTACTACTACTATTCATTGGGAGTTAGTCAGCCAGATTTGATATGTCGAACACATTGAAAATGTGGAGACCTGAGGATAGTTCGATGACATAAGCACGGGTCCAACTTTTGTAACGAATACGACAAGGTCCTATCACCATATGCTTGTGTTAATTATGTGTATTGGCAAAAAAATATATTGTCATAAATGTATTGTGGGCCATGGCTACTTCTTCAGTGAATTATTTAAGTCTGCCATCCTTTCTTAGCTTCCAAGCCATAGCATATTTCTTGTTTGTTGAGGTTAAATGATCAATAACTTCAGTATGTATCCATTTTATCCTCTTAAAATTAATTTCTGCTTCATGACTAATATCAATCAGATTTGGAAGATTGACAAGATCAATAGTTAACTAAGGAGGACTGGTATGAGCACTGTCAATGAGAGAGGAAGGGATAGGTTAGTTGAGCAAGTCTTAGTTAGAGGTTTTTGGAAATATCTGATGTCAAACAAAAAAAGAGAAAAAAAGAGAAAAAAGGAAAAACAACGATCAAACCTAGTTAGGATAAGCACTTTATTTGCTTCTTGCATAAGCTGCTTTTTGTTTGATGTTAGTTGTACTCTTTAGAAATGTATTAATCTTGACAACCATTTTCTGATAAGGTTTTAACGAGTGGTTTCTTCATTCTACTTGGATATTTTTAGTGTCTTATGTACCTGTATCATTATCCTGATGTATGGTACGATTATGCTACGTGGCATGCAAATAATGGATCAATAGAAGCTGCAATTAAAGTATTTCAGCGAGCTTTGAATGCTCTTCCTGGTAATTTAGTACCTTTTCTTTTCTGTAGATATCTTTCTTCAATGGTATCTTGTTTATTATTTAGTAAACGACTTGGTTCTCACTTATATCACGATAATTCTTTTCAAGCATGTATTTTAGTTTCTAGCCTTCTTGTCTTCTTCTCTACATCTACAGTGACTCAACTAATCAACACTTGAGGCACACATAATATTTGCTTAACAGATTTGTCTCAAGTAGCACAAACATTTTGGTTCTTGTAATTTATACACCTAGTTTCAGTGTCTTCTTTTTTCCTCATCTAATCACCTTTTCTCTTATTTCTATATGCAGACTCAGATATGCTAAAATATGCTTACGCAGAGCTAGAGGAATCTCGCGGAACACTTCAGGCATGAAATCTTGATTTCCCTGAACAGTAATGTATATCTGGGTTGCCCATTAATTTGACTCTAATTCCTTATTGTAGTCTGCAAAGAAGATATATGAAAGCCTTTTGAGTGATGGTATTAATGCGACTGCCCTGGCACATATTCAAGTGAGTTTGACATTTTAGCTTACGTTATTTATTCCACATACATGCTTGTCTCTGAAAAAATAGTTGGCTCACAATTGATCAGAAACTATTAAAAGGTTATAAGGATTTAGATCCATGGTTATTTGGGAAATCATATTGAATATCCTGTTTTTATGGTCTATAGAAGTCTAAAGCTATCTGGATGGTGAATTTTTTGGGTTCTGAGGGAAAGAGTTTCAGCTTAGATAGTTTGTACGAAGATGGTTGGAATTCCTAATATTTATGAATACTTATGTATAATTATTAGTTGTTAATATTTGGTCAATATTCTCTTTATTTTTTCCCTATTTTGTTATAGGTCTTTCTTCTATATAAGTATACCTAGTTGCACATATTTGAATATAGCACAATAGTCTTATTCTCTCAAAATTAGCAAATATACTGGTAATATAATGTGTCAATTTTTGGCTGGGGTGGGGTAACTTTATGATTAAATGAGGATTCTAAAAAGGTCCTGATGTCTTGTCACTAGCAAAAAGGGGAAAGAAATTGATTTATTTCAATTTCATCTCCTAGAAATCTTTGGTTGTATGGTTTTGCTATACAAAATATGCATTGTGTCTGCCTTGCTATAGAAAATTCTTTGGGAAGGATGTAACGATGGTGGTTTGTGATGCAGTTTATCCGTTTTCTTAGGAGAAACGAAGGAGTTGAGGCTGCTCGCAAACACTTCTTGGATGCTCGCAAATCCCCAAATTGCACGTATCATGTTTATGTTGCTTATGCCATGATGGCCTTTTGTCTTGACAAGGATCCCAAGGTCTCTCTCTTTCCACTTTGGCAATGCAATTCTAGATCTGATCACTTATGTGCTCTTTATCCTTAAGAAAAGGAACTGAATGGTCTTCTTACACCTTTAACCTTGCCATTGATGATTAAAACAATGTAGTTGCTTCTATTTTCATGTGAGGTCAATATGGATTATATGCTCTTAATGCTCTGCTCGTCCATGCTTTGGATAAATCAAATTATCTTGCTCCTCCTATAACCATGATCAATTAAAGACGTGGTGTATTTGGCTAATAAAGAAAAACCCTAGTCATCTTCGTTACTCATCTTAAATGATGCTGCAGATGGCACACAATGTTTTTGAAGATGGAATGAAGCGGTTTATGAATGAGCCCACATACATTCTTGAGTGAGTTTTCCCATTTCTGATTTAAAAAAAAACAAGAAAAAAAGAAAAAAGAAACTGTGGACTGTCACTACGTCCATACACTGTGTATATAGAATTTCAATCAGTTAACTGCTATCTATGTGTAACTCTTGAGAGTTCCAGTACATATTTTAGACCACCCTTTACCCCTTCAATTAAGCTAAGGTCACTCTTTGGTGGTATGTTATCTGTTTGATTCTTTTAGTATTTTGGAAGCTTAGAAGTAGGATATCTTCTAAAAGCGTGCTCCAAAAAAATTTCAGGAGGGCGCCTCACCATTTCATTATTTTTTGAATAAATAAATTAAGAGATATCCTTGAAAACCCCTCATGTCTCCAAAAAATCTTTTAGAAAAGCTCTAAACAATCTCTTACGCAGCTCTGATGTCATAATTTTTTCTTAATTCACAATATTATATTTTTCATATATAAAATTTTGTTTATATTTTTCTATCGCATGCCTATAAGATATACCCTCTTTTTTTTTTGCTTAAGCCTTGCGCTTTAAAAGAAAAAGGGAAGAAAGAAAGAATAGGAGAGATATTGATGCTGTGGGAGAGCTTAACTTGGTGGCTCTCCACCGGCTTCCAAGAACCAGAATTTTTGTAATATCCTCTTTATCTTGTTTGCGGCTTGACAGAAGAGTTTTTTGGCCCTGTAGCCTGTTCAAGGACATAACTATTTTATGTCTTATGAAAAAAATAAAGCCAACTTATATTATGTGTAATTTTACAGATATGCAGATTTCCTTGCTCGCTTGAATGATGACAGAAACATTCGGGCTTTATTTGAGCGTGCTTTAAGCACGTTGCCGCTAGAGGAATCAACTGAGGTAGCTGAAATTCTATTTTATTAATTTACTTCTACTTCTGATAGCTTGCTAGTTTCCACAGCACTAAAGAACGATCTTTTACCCTTGACAAAGTGCATAGTGCTTGTCCTTTCGTTCTGTATAGTAATTTTATATGAACAACGATGGATTTAAGTTTCCTTGTTTCTCTTCCAGTGAGATACTGATTCATTTGAATAAGAAAACACGTTAATGATTTTTTTATTACTTCATAAAATTTTATTTTTCTTTACTTAACCTCCCTGTTTCGTTGGCCAAACACATAATGGTTCATTAACCTTTTGACATGTCGTTCTGCATCAAATTGTGTGGTGCATATCAACTTTGGTTTAGAATTCCCAATTGGTTCTATTCTATATGTTTTGATATCATGATATGTATGTGTGTGACGTAGGGTTGGATTTAAGTTGCTTCATCGACACTTGCAGTCTGTTACTGTTGCTGGACTTGTTGCCTTGAATACCACTGGAAAGCGGAAGAATTTATATCTGATGCAGAGTCCTAACTTTGCATATACACATTAACCTGCCTTAACTGGACTTGTGGATTTGAATACCACTGAAAATCCTTAGAGTTCGTATACGATGCTATACACACCAACATGCCTTAAGTTGTTTTTCTAGTCTTAATTTTATATTGCTGGTTCATGCACCTTGATAGTGGTTAGTCCCAAAATCACACTCTCCTTTGGAAAGACCTCAAATGTTTGTAATTATTTTCAATTTCTAGTCTCCTTTTTGCGTTGCTATTTCATGGGTGAATTTGAAAATTTCATACGAATTATGACATTCTTTTTTCTCTCTTATACAGTATTTTTGTTAATTATTTTATGTTTAATATTCGTAATGGATTTGCATCATTAATTGCCTTTCCTTTTGGGGGTTTGGTTTTTAAGTTGTTCTGGACGTCCTCGTCTACAGGTTTGGAAACGGTTCACCCATTTTGAGCAAACTTATGGAGACCTTGCTAGCATGCTGAAGGTACTAATTCTTTTTACTAGTTCATTCCTTCACAGTGAGCTTATTCTTGAATCCGTCCAATTATACAAGTCAATGTAACCACATGCATTGTTTTTTATTTGGCTGCATAGAAAAAACATCCCTTGAACTTAAGGTCATTTGCAAGTTGGAAATTCAAGCCCTACACATCCCATGGTTTTCAATTAGTTGGTTCATACTTCATATGTTGATATTCGGCTCTATTTTTTAATGGAATATCATGTTTCAGTTCCTTGCCATCTTCTCTCCTCTGTGTAAACATTTAAGTAATTTATTGTATGAAAAGACTTCTGGCTCCTGTCAGAAGGGCGAGAACTCTCTCATGAAGTATTTTAAGATCCCCTTTTGAAGGGTGGGTATGTGAACCCACTCTACAAAAGGGGGTAAGCCTCTCCCTTGCCTCTTGATGACCCTTTTTATTTTTTCTTTCCTTTTCTTTAGTTCCATTCAGAGAAATGAGGGAACAAATAATTCATTGATTAGTTATCCTTATCCCTACCACAAGAAGGGGAATAAAAGAACTTTCTTCTCTATAAACAACCTACCATAGTAATTTTTGATGAGAAGCCATGCTTTCATGTTAATGAAAGAAACTACAAGAGCGTACAAAAACCAGCCAATCAAAAGAGTCCGAACTGACAAACGGACTCCAATCCAAAATAATAATAAAACCTAATTGATAATTACAAAATAGTTTAGTAATTGAAGCCCATGAAGAGGTATTAAATCTAAGAACCTCCCACACCTCTTCCCACGACTTGTACCACCTATTGCAGTAATTAGAACACACCAAGAAGGGGAACAAGGATTAAACATCTTTCTCCTTTGCAGCCTATCACGAATTTAACCTATTCATTGCTAAAATTCGAACAGAAGCCTACATTTTAGAGGGGATCCTTTTCATCATCTTGTATTACAAGAATTGAATCTCATATCTAAACAGTCGTTGTATAGAATTGGAAAGAAAGATTTACAAGTGAAACTGGCACTTGGATTACATGACAAAATATGCATCTCTGTTTAGAAATTATTTTCAAAGAGAATATAACTTTCCATAGGGTTTACTTGACAAGAAAACAAAGAACAGGCACTAACATTTTAAGTATTGATGTTTTGAGGAAAGTATTTCTTTTAAGGGCAATGGCAACAATGATTTAAGCATTTACAACCTCTGAAGGTGAACTGTATTTTGAATTTCATTTGTGATCGATTTTAGTCAGCACCAGACTTTGTAAGAGGAAATTTGTTTATTTATTTCATCATCAGTCCCAGATGGACAATGCACAATGTTCTCCTCCACCTTTTCATTGTTTGTAGCCTTGTTTAGGTTGAAAAAAGAAGAAAGGAGGCTCTTTCTCAAATGGGTGATGATGGAGCATCAACATTGGAAGGTACATTACAAGATGTTGTATCCCGGTATAGTTTTATGGATCTCTGGCCATGCTCATCTAGTGATCTGGATAATTTGTCCAGACAAGAGGTAATCTTAATTTTAATCTTTGGAGTTTGTACACGATTTGTTATAGATGCCTTTGGCCATTTTTGTTCCATCTTCTGTTGTGTATTTTGTAAGTACATTTTTATTTGAACTTGAAATAAGGGGCAGTGCATGTTGAATCTTTAATTTGTTACTTGTAAGGGTTTTTATATGACTGGTGCTACTTCCACTCTTTCAGTGGCTCGCTAAGAACATAAATAAGAACTCAGAAAAATCTGTTCTGCCTAGTGGACCTGGTTTTTTAGGTAATTCTATTGTTCTTGTCTTGTTAAAACATTTTGGTCATATCTGTTTCTGCTGGGTAAGCTCTCTCCTATTTGGCTCAGATACTGGTTCTGCAGGTCTCCATTCAATTCCATCTACAAAGGTCGTATATCCAGACACCTCTCAGATGGTGATTTATGACCCAAGCCAAAAATTAGGTACTTACGAAACTCCAGAATTTTATCCTGCAAGTTAAGCAATTTGGATCATATCATGTTCTTATGCAATCTATCCTATACGACAGTCTTATTGGTGTATCATATTTTCAGAGTCTGATGATTTATTAATTTTCTTATCAATCATTTTATTTTTATAAATATTACATTGTATCTAAATATTTTGTATTGCAATAAATAAGTCGAACTTTCAAATCTCAGAAATCAAATTTAAATATCATCTAGTCATTTTATCCTCCCTAATGATTTCTATTAGACATCTCTTTTTTACGGTTTCTTTTAATACTTTGTGCCATGAGCTTGGAATACTGGTTCCCTGCTCATTCATAGTTTTGTAAGAATGGATTATTTTTCCTTACGAGGAAAAATTAGAAAGATGAGTGAAGATGGCCAAAATTAAATACTTGGCAGTGTGGCGAATAGAAGTCACTAGTCAGATTCAGGTATTATTTAGTTTGGTGATACCATTGGATAAAATTAGTAAAATTCACTTAGTCGTATGCCTGACCAAGGTTTGACTTTGTAAGACGGAGGAACTTTTTGAAGTTGGACTAAAGAAAATGTTGGTTGATTAAACATATTAGATATGTGGTGGAATAATATTCACTGAAATACTGGGGCAGACTTACAAGAAAAAATGAAAATTTTTATGAATGACTATCCTGCTACAAAATAGATAATTTTGTGTCAAGACTTTTTATATACTAATTGATTATTTTATTTGATATTACTGAACTTGCTTTTCATTTGGTGGTGACTGGAATTCTTCCAACTGCAACAGCTGCTGGACTTCCTGCTAATCCAACCACCTTGCCAAATTCTGTTTCTGTTGCGAGTGTAGGACCAACTAATGTATTTGACGAAATATTAAAAGCAACACCAGCTGCATTAATAGCATTTCTTGCAAACTTACCCGCTGTTGATGGTAACCTTTTTTATGTCTTATATTGAAGGCAATTATATGTTTCAAGATTATTTAATTTCCTTTGTTGTTACTGTCATCTAATTGTAAATATTAAATTCGAGCAAGAGTTCACTCTGTTAGGAGTTATGTTGGTGGTTAATTTCATAGGTAGTAGTTAATTATGTAGTGGAGTGGGTGTAAGTTGGGGAGATCTCGTAGGCTTAGTTAGTGATGTTAGTTAGAGAGAATTTGAAGGGCAGTGGTTTAATTAGTGGATTAATCGTCGGTTATTTATTTTTCAATAAATATATGTAAACAGTTCTCATTTTAGTGAATAGAAATTCTTCCTTTGTACAATTTCTCTCATACTTCCATGCTTTGTTGTTCTCTTCATTCTTTTCGTTACACATGGTGGTTAATGGGAGGTTGGTTTCTTTCTTATGAAATTTTCAGGTCCGACCCCAGATGTCGATGTTGTACTATCGGTTTGTCTCGAGAGTGACATACCTACAGTTCCATCCATCAAATCAGGGGCAACACCAGCACAAGTTTCGGCTGGTCCTGTTGCTACCACTACCACTAGTGACCTTTCTGGTTCAAGCAAGTCTCACGCATTTTCAAATTCCTCTCTAAAGCATACCAGAGATAGACAATCAGGGAAGAGAAAAGATTACGACAGTATGTTTTTCCTCTATTCTCTCTATTTATTGTGCCTTCCATTGGTTCATGTCTAATTTCATGCATCAGCAACATGCCCCTTGGATTCCAGCTTTCACGCTCACATATTTGAAATTAAATTAGAAATTTAGTCCTTCAACTTTAAACTCAGAAAACCCAGAAAGTTTCACTTACATCCTTAACTTTAAAATATGACATGACATGATTATTGAATTAATATTGACTGATTTGTATGAGCGTGGCAGAAAGTGTAACCAGTTGGAAAAAAAATTGATTGGTATATAACACTCATCTATTTGAAGTAATGTATCAAGTCCAACTTTTTGTAGATCGTGTCACCATACTTTTGTTTAACTTTTCACTCCTTTTTAGATCTCCAGGATATGTCACGTCATCATTTAGTTAACGGTTGATGATAAGGACTGCAAAGAATCACAATTATCTTTACATAATTATTTTTTCTTGTCGACAAAATCATAACTCGACGGGATGTTTGTTGATTGGTTGATAGGACAAGATGATGATGAAAGTACAACAGTCCAAAGTCAGCCATTGCCTAGGGATTTCTTCAGAATACGTCAAATTCAGAAAGCTCGAGGAGCTACTTCTTCCCAAACAGGTTCTGCTTCCTATGGAAGTGCTATTTCTGGTGATCTGTCTGGTAGCACTGGT

mRNA sequence

ATGGTTATAAATAACGACGATGCTACAAAACAGATATTTAGCCGGTGTTTATTGAACTGTCTTCACATTCCTCTTTGGCGTTGCTACATCCGATTCATCAAGAAGGTCAATGAAAGGAAAGGGATGGAAGGCCAGGAGGAAACTAGAAAAGCTTTTGATTTTATGCTCAGCTATCTTGGTGTTGACATAGCATCTGGCCCTGTATGGATGGAATACATTGCCTTTTTAAAGTCACTGCCGGCTCTAAGCTCACAGGAGGAGTCGCAACGTATGACTGCAGTGAGGAAGGTCTACCAGAAAGCTATTATTACTCCTACCCATCACATTGAGCAACTGTGGAGGGATTATGAAAATTTTGAGAATTCTCAGGCGAAGGGACTAATATCTGAATATCAACCAAAATTTAACAGTGCTCGGGCTGTCTATAGGGAGAGGAAGAAGTATGTTGATGAGATTGATTGTAACATACTTGCTGTACCACCAACTGGCTCTCCAAAGGCAATTACTTTTCCTTCTTATGATATGATTGGCGGCCATATAGGAAATCCCCAGAGGATAGACAGCGCATCATCCAACAAACGGATTATATTCACATATGAGCAGTGTCTTATGTACCTGTATCATTATCCTGATGTATGGTACGATTATGCTACGTGGCATGCAAATAATGGATCAATAGAAGCTGCAATTAAAGTATTTCAGCGAGCTTTGAATGCTCTTCCTGGTAATTTAGTACCTTTTCTTTTCTGTAGATATCTTTCTTCAATGTCTGCAAAGAAGATATATGAAAGCCTTTTGAGTGATGGTATTAATGCGACTGCCCTGGCACATATTCAATTTATCCGTTTTCTTAGGAGAAACGAAGGAGTTGAGGCTGCTCGCAAACACTTCTTGGATGCTCGCAAATCCCCAAATTGCACGTATCATGTTTATGTTGCTTATGCCATGATGGCCTTTTGTCTTGACAAGGATCCCAAGATGGCACACAATGTTTTTGAAGATGGAATGAAGCGGTTTATGAATGAGCCCACATACATTCTTGAATATGCAGATTTCCTTGCTCGCTTGAATGATGACAGAAACATTCGGGCTTTATTTGAGCGTGCTTTAAGCACGTTGCCGCTAGAGGAATCAACTGAGGTTTGGAAACGGTTCACCCATTTTGAGCAAACTTATGGAGACCTTGCTAGCATGCTGAAGGTTGAAAAAAGAAGAAAGGAGGCTCTTTCTCAAATGGGTGATGATGGAGCATCAACATTGGAAGGTACATTACAAGATGTTGTATCCCGGTATAGTTTTATGGATCTCTGGCCATGCTCATCTAGTGATCTGGATAATTTGTCCAGACAAGAGTGGCTCGCTAAGAACATAAATAAGAACTCAGAAAAATCTGTTCTGCCTAGTGGACCTGGTTTTTTAGGTAATTCTATTGTTCTTGTCTTGTTAAAACATTTTGGTCATATCTGTTTCTGCTGGGTAAGCTCTCTCCTATTTGGCTCAGATACTGGTTCTGCAGGTCTCCATTCAATTCCATCTACAAAGGTCGTATATCCAGACACCTCTCAGATGGTGATTTATGACCCAAGCCAAAAATTAGGTACTTACGAAACTCCAGAATTTTATCCTGCAACTGCTGGACTTCCTGCTAATCCAACCACCTTGCCAAATTCTGTTTCTGTTGCGAGTGTAGGACCAACTAATGTATTTGACGAAATATTAAAAGCAACACCAGCTGCATTAATAGCATTTCTTGCAAACTTACCCGCTGTTGATGGTCCGACCCCAGATGTCGATGTTGTACTATCGGTTTGTCTCGAGAGTGACATACCTACAGTTCCATCCATCAAATCAGGGGCAACACCAGCACAAGTTTCGGCTGGTCCTGTTGCTACCACTACCACTAGTGACCTTTCTGGTTCAAGCAAGTCTCACGCATTTTCAAATTCCTCTCTAAAGCATACCAGAGATAGACAATCAGGGAAGAGAAAAGATTACGACAGACAAGATGATGATGAAAGTACAACAGTCCAAAGTCAGCCATTGCCTAGGGATTTCTTCAGAATACGTCAAATTCAGAAAGCTCGAGGAGCTACTTCTTCCCAAACAGGTTCTGCTTCCTATGGAAGTGCTATTTCTGGTGATCTGTCTGGTAGCACTGGT

Coding sequence (CDS)

ATGGTTATAAATAACGACGATGCTACAAAACAGATATTTAGCCGGTGTTTATTGAACTGTCTTCACATTCCTCTTTGGCGTTGCTACATCCGATTCATCAAGAAGGTCAATGAAAGGAAAGGGATGGAAGGCCAGGAGGAAACTAGAAAAGCTTTTGATTTTATGCTCAGCTATCTTGGTGTTGACATAGCATCTGGCCCTGTATGGATGGAATACATTGCCTTTTTAAAGTCACTGCCGGCTCTAAGCTCACAGGAGGAGTCGCAACGTATGACTGCAGTGAGGAAGGTCTACCAGAAAGCTATTATTACTCCTACCCATCACATTGAGCAACTGTGGAGGGATTATGAAAATTTTGAGAATTCTCAGGCGAAGGGACTAATATCTGAATATCAACCAAAATTTAACAGTGCTCGGGCTGTCTATAGGGAGAGGAAGAAGTATGTTGATGAGATTGATTGTAACATACTTGCTGTACCACCAACTGGCTCTCCAAAGGCAATTACTTTTCCTTCTTATGATATGATTGGCGGCCATATAGGAAATCCCCAGAGGATAGACAGCGCATCATCCAACAAACGGATTATATTCACATATGAGCAGTGTCTTATGTACCTGTATCATTATCCTGATGTATGGTACGATTATGCTACGTGGCATGCAAATAATGGATCAATAGAAGCTGCAATTAAAGTATTTCAGCGAGCTTTGAATGCTCTTCCTGGTAATTTAGTACCTTTTCTTTTCTGTAGATATCTTTCTTCAATGTCTGCAAAGAAGATATATGAAAGCCTTTTGAGTGATGGTATTAATGCGACTGCCCTGGCACATATTCAATTTATCCGTTTTCTTAGGAGAAACGAAGGAGTTGAGGCTGCTCGCAAACACTTCTTGGATGCTCGCAAATCCCCAAATTGCACGTATCATGTTTATGTTGCTTATGCCATGATGGCCTTTTGTCTTGACAAGGATCCCAAGATGGCACACAATGTTTTTGAAGATGGAATGAAGCGGTTTATGAATGAGCCCACATACATTCTTGAATATGCAGATTTCCTTGCTCGCTTGAATGATGACAGAAACATTCGGGCTTTATTTGAGCGTGCTTTAAGCACGTTGCCGCTAGAGGAATCAACTGAGGTTTGGAAACGGTTCACCCATTTTGAGCAAACTTATGGAGACCTTGCTAGCATGCTGAAGGTTGAAAAAAGAAGAAAGGAGGCTCTTTCTCAAATGGGTGATGATGGAGCATCAACATTGGAAGGTACATTACAAGATGTTGTATCCCGGTATAGTTTTATGGATCTCTGGCCATGCTCATCTAGTGATCTGGATAATTTGTCCAGACAAGAGTGGCTCGCTAAGAACATAAATAAGAACTCAGAAAAATCTGTTCTGCCTAGTGGACCTGGTTTTTTAGGTAATTCTATTGTTCTTGTCTTGTTAAAACATTTTGGTCATATCTGTTTCTGCTGGGTAAGCTCTCTCCTATTTGGCTCAGATACTGGTTCTGCAGGTCTCCATTCAATTCCATCTACAAAGGTCGTATATCCAGACACCTCTCAGATGGTGATTTATGACCCAAGCCAAAAATTAGGTACTTACGAAACTCCAGAATTTTATCCTGCAACTGCTGGACTTCCTGCTAATCCAACCACCTTGCCAAATTCTGTTTCTGTTGCGAGTGTAGGACCAACTAATGTATTTGACGAAATATTAAAAGCAACACCAGCTGCATTAATAGCATTTCTTGCAAACTTACCCGCTGTTGATGGTCCGACCCCAGATGTCGATGTTGTACTATCGGTTTGTCTCGAGAGTGACATACCTACAGTTCCATCCATCAAATCAGGGGCAACACCAGCACAAGTTTCGGCTGGTCCTGTTGCTACCACTACCACTAGTGACCTTTCTGGTTCAAGCAAGTCTCACGCATTTTCAAATTCCTCTCTAAAGCATACCAGAGATAGACAATCAGGGAAGAGAAAAGATTACGACAGACAAGATGATGATGAAAGTACAACAGTCCAAAGTCAGCCATTGCCTAGGGATTTCTTCAGAATACGTCAAATTCAGAAAGCTCGAGGAGCTACTTCTTCCCAAACAGGTTCTGCTTCCTATGGAAGTGCTATTTCTGGTGATCTGTCTGGTAGCACTGGT

Protein sequence

MVINNDDATKQIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLGVDIASGPVWMEYIAFLKSLPALSSQEESQRMTAVRKVYQKAIITPTHHIEQLWRDYENFENSQAKGLISEYQPKFNSARAVYRERKKYVDEIDCNILAVPPTGSPKAITFPSYDMIGGHIGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDVWYDYATWHANNGSIEAAIKVFQRALNALPGNLVPFLFCRYLSSMSAKKIYESLLSDGINATALAHIQFIRFLRRNEGVEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKMAHNVFEDGMKRFMNEPTYILEYADFLARLNDDRNIRALFERALSTLPLEESTEVWKRFTHFEQTYGDLASMLKVEKRRKEALSQMGDDGASTLEGTLQDVVSRYSFMDLWPCSSSDLDNLSRQEWLAKNINKNSEKSVLPSGPGFLGNSIVLVLLKHFGHICFCWVSSLLFGSDTGSAGLHSIPSTKVVYPDTSQMVIYDPSQKLGTYETPEFYPATAGLPANPTTLPNSVSVASVGPTNVFDEILKATPAALIAFLANLPAVDGPTPDVDVVLSVCLESDIPTVPSIKSGATPAQVSAGPVATTTTSDLSGSSKSHAFSNSSLKHTRDRQSGKRKDYDRQDDDESTTVQSQPLPRDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGSTG

Homology

[Close]

BLAST of MS017042 vs. NCBI nr
Match: XP_022154466.1 (cleavage stimulation factor subunit 77 isoform X1 [Momordica charantia])

HSP 1 Score: 1238.8 bits (3204), Expect = 0.0e+00
Identity = 650/731 (88.92%), Postives = 661/731 (90.42%), Query Frame = 0


Query: 1   MVINNDDATKQIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG 60
           MVINNDDATKQIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG
Sbjct: 69  MVINNDDATKQIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG 128

Query: 61  VDIASGPVWMEYIAFLKSLPALSSQEESQRMTAVRKVYQKAIITPTHHIEQLWRDYENFE 120
           VDIASGPVWMEYIAFLKSLPALSSQEESQRMTAVRKVYQKAIITPTHHIEQLWRDYENFE
Sbjct: 129 VDIASGPVWMEYIAFLKSLPALSSQEESQRMTAVRKVYQKAIITPTHHIEQLWRDYENFE 188

Query: 121 NS----QAKGLISEYQPKFNSARAVYRERKKYVDEIDCNILAVPPTGSPK-AITFPSYD- 180
           NS     AKGLISEYQPKFNSARAVYRERKKYVDEIDCNILAVPPTGSPK  + + S+  
Sbjct: 189 NSVSRQLAKGLISEYQPKFNSARAVYRERKKYVDEIDCNILAVPPTGSPKEELQWMSWKR 248

Query: 181 MIGGHIGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDVWYDYATWHANNGSIEAAIKVFQ 240
           +I    GNPQRIDSASSNKRIIFTYEQCLMYLYHYPDVWYDYATWHANNGSIEAAIKVFQ
Sbjct: 249 LIAFEKGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDVWYDYATWHANNGSIEAAIKVFQ 308

Query: 241 RALNALP-GNLVPFLFCRYLSS----MSAKKIYESLLSDGINATALAHIQFIRFLRRNEG 300
           RALNALP  +++ + +     S     SAKKIYESLLSDGINATALAHIQFIRFLRRNEG
Sbjct: 309 RALNALPDSDMLKYAYAELEESRGTLQSAKKIYESLLSDGINATALAHIQFIRFLRRNEG 368

Query: 301 VEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKMAHNVFEDGMKRFMNEPTYILEY 360
           VEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKMAHNVFEDGMKRFMNEPTYILEY
Sbjct: 369 VEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKMAHNVFEDGMKRFMNEPTYILEY 428

Query: 361 ADFLARLNDDRNIRALFERALSTLPLEESTEVWKRFTHFEQTYGDLASMLKVEKRRKEAL 420
           ADFLARLNDDRNIRALFERALSTLPLEESTEVWK+FTHFEQTYGDLASMLKVEKRRKEAL
Sbjct: 429 ADFLARLNDDRNIRALFERALSTLPLEESTEVWKQFTHFEQTYGDLASMLKVEKRRKEAL 488

Query: 421 SQMGDDGASTLEGTLQDVVSRYSFMDLWPCSSSDLDNLSRQEWLAKNINKNSEKSVLPSG 480
           SQMGDDGASTLEGTLQDVVSRYSFMDLWPCSSSDLDNLSRQEWLAKNINKNSEKSVLPSG
Sbjct: 489 SQMGDDGASTLEGTLQDVVSRYSFMDLWPCSSSDLDNLSRQEWLAKNINKNSEKSVLPSG 548

Query: 481 PGFLGNSIVLVLLKHFGHICFCWVSSLLFGSDTGSAGLHSIPSTKVVYPDTSQMVIYDPS 540
           PGFL                           DTGSAGLHSIPSTKVVYPDTSQMVIYDPS
Sbjct: 549 PGFL---------------------------DTGSAGLHSIPSTKVVYPDTSQMVIYDPS 608

Query: 541 QKLGTYETPEFYPATAGLPANPTTLPNSVSVASVGPTNVFDEILKATPAALIAFLANLPA 600
           QKL            AGLPANPTTLPNSVSV S GPTNVFDEILKATPAALIAFLANLPA
Sbjct: 609 QKL-----------AAGLPANPTTLPNSVSVVSGGPTNVFDEILKATPAALIAFLANLPA 668

Query: 601 VDGPTPDVDVVLSVCLESDIPTVPSIKSGATPAQVSAGPVATTTTSDLSGSSKSHAFSNS 660
           VDGPTPDVDVVLSVCLESDIPT+PSIKSGATPAQVSAGPVATTTTSDLSGSSKSHAFSNS
Sbjct: 669 VDGPTPDVDVVLSVCLESDIPTIPSIKSGATPAQVSAGPVATTTTSDLSGSSKSHAFSNS 728

Query: 661 SLKHTRDRQSGKRKDYDRQDDDESTTVQSQPLPRDFFRIRQIQKARGATSSQTGSASYGS 720
           SLKHTRDRQSGKRKDYDRQDDDESTTVQSQPLPRDFFRIRQIQKARGATSSQTGSASYGS
Sbjct: 729 SLKHTRDRQSGKRKDYDRQDDDESTTVQSQPLPRDFFRIRQIQKARGATSSQTGSASYGS 761

[Close]

BLAST of MS017042 vs. NCBI nr
Match: XP_022154467.1 (cleavage stimulation factor subunit 77 isoform X2 [Momordica charantia])

HSP 1 Score: 1226.8 bits (3173), Expect = 0.0e+00
Identity = 645/731 (88.24%), Postives = 656/731 (89.74%), Query Frame = 0


Query: 1   MVINNDDATKQIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG 60
           MVINNDDATKQIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG
Sbjct: 69  MVINNDDATKQIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG 128

Query: 61  VDIASGPVWMEYIAFLKSLPALSSQEESQRMTAVRKVYQKAIITPTHHIEQLWRDYENFE 120
           VDIASGPVWMEYIAFLKSLPALSSQEESQRMTAVRKVYQKAIITPTHHIEQLWRDYENFE
Sbjct: 129 VDIASGPVWMEYIAFLKSLPALSSQEESQRMTAVRKVYQKAIITPTHHIEQLWRDYENFE 188

Query: 121 NS----QAKGLISEYQPKFNSARAVYRERKKYVDEIDCNILAVPPTGSPK-AITFPSYD- 180
           NS     AKGLISEYQPKFNSARAVYRERKKYVDEIDCNILAVPPTGSPK  + + S+  
Sbjct: 189 NSVSRQLAKGLISEYQPKFNSARAVYRERKKYVDEIDCNILAVPPTGSPKEELQWMSWKR 248

Query: 181 MIGGHIGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDVWYDYATWHANNGSIEAAIKVFQ 240
           +I    GNPQRIDSASSNKRIIFTYEQCLMYLYHYPDVWYDYATWHANNGSIEAAIKVFQ
Sbjct: 249 LIAFEKGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDVWYDYATWHANNGSIEAAIKVFQ 308

Query: 241 RALNALP-GNLVPFLFCRYLSS----MSAKKIYESLLSDGINATALAHIQFIRFLRRNEG 300
           RALNALP  +++ + +     S     SAKKIYESLLSDGINATALAHIQFIRFLRRNEG
Sbjct: 309 RALNALPDSDMLKYAYAELEESRGTLQSAKKIYESLLSDGINATALAHIQFIRFLRRNEG 368

Query: 301 VEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKMAHNVFEDGMKRFMNEPTYILEY 360
           VEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKMAHNVFEDGMKRFMNEPTYILEY
Sbjct: 369 VEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKMAHNVFEDGMKRFMNEPTYILEY 428

Query: 361 ADFLARLNDDRNIRALFERALSTLPLEESTEVWKRFTHFEQTYGDLASMLKVEKRRKEAL 420
           ADFLARLNDDRNIRALFERALSTLPLEESTEVWK+FTHFEQTYGDLASMLKVEKRRKEAL
Sbjct: 429 ADFLARLNDDRNIRALFERALSTLPLEESTEVWKQFTHFEQTYGDLASMLKVEKRRKEAL 488

Query: 421 SQMGDDGASTLEGTLQDVVSRYSFMDLWPCSSSDLDNLSRQEWLAKNINKNSEKSVLPSG 480
           SQMGDDGASTLEGTLQDVVSRYSFMDLWPCSSSDLDNLSRQEWLAKNINKNSEKSVLPSG
Sbjct: 489 SQMGDDGASTLEGTLQDVVSRYSFMDLWPCSSSDLDNLSRQEWLAKNINKNSEKSVLPSG 548

Query: 481 PGFLGNSIVLVLLKHFGHICFCWVSSLLFGSDTGSAGLHSIPSTKVVYPDTSQMVIYDPS 540
           PGFL                                GLHSIPSTKVVYPDTSQMVIYDPS
Sbjct: 549 PGFL--------------------------------GLHSIPSTKVVYPDTSQMVIYDPS 608

Query: 541 QKLGTYETPEFYPATAGLPANPTTLPNSVSVASVGPTNVFDEILKATPAALIAFLANLPA 600
           QKL            AGLPANPTTLPNSVSV S GPTNVFDEILKATPAALIAFLANLPA
Sbjct: 609 QKL-----------AAGLPANPTTLPNSVSVVSGGPTNVFDEILKATPAALIAFLANLPA 668

Query: 601 VDGPTPDVDVVLSVCLESDIPTVPSIKSGATPAQVSAGPVATTTTSDLSGSSKSHAFSNS 660
           VDGPTPDVDVVLSVCLESDIPT+PSIKSGATPAQVSAGPVATTTTSDLSGSSKSHAFSNS
Sbjct: 669 VDGPTPDVDVVLSVCLESDIPTIPSIKSGATPAQVSAGPVATTTTSDLSGSSKSHAFSNS 728

Query: 661 SLKHTRDRQSGKRKDYDRQDDDESTTVQSQPLPRDFFRIRQIQKARGATSSQTGSASYGS 720
           SLKHTRDRQSGKRKDYDRQDDDESTTVQSQPLPRDFFRIRQIQKARGATSSQTGSASYGS
Sbjct: 729 SLKHTRDRQSGKRKDYDRQDDDESTTVQSQPLPRDFFRIRQIQKARGATSSQTGSASYGS 756

[Close]

BLAST of MS017042 vs. NCBI nr
Match: XP_008442046.1 (PREDICTED: cleavage stimulation factor subunit 77 isoform X1 [Cucumis melo])

HSP 1 Score: 1158.7 bits (2996), Expect = 0.0e+00
Identity = 609/733 (83.08%), Postives = 643/733 (87.72%), Query Frame = 0


Query: 1   MVINNDDATKQIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG 60
           MV+NNDDAT+QIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG
Sbjct: 69  MVVNNDDATRQIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG 128

Query: 61  VDIASGPVWMEYIAFLKSLPALSSQEESQRMTAVRKVYQKAIITPTHHIEQLWRDYENFE 120
           VDI+SGPVWMEYIAFLKSLPALSSQEES RMTAVRKVYQKAIITPTHHIEQLWRDYENFE
Sbjct: 129 VDISSGPVWMEYIAFLKSLPALSSQEESHRMTAVRKVYQKAIITPTHHIEQLWRDYENFE 188

Query: 121 NS----QAKGLISEYQPKFNSARAVYRERKKYVDEIDCNILAVPPTGSPK-AITFPSY-D 180
           NS     AKGL+SEYQPKFNSARAVYRERKKYVDEIDCN+LAVPPTGSPK  + + S+  
Sbjct: 189 NSVSRQLAKGLVSEYQPKFNSARAVYRERKKYVDEIDCNMLAVPPTGSPKEELQWMSWRR 248

Query: 181 MIGGHIGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDVWYDYATWHANNGSIEAAIKVFQ 240
           +I    GNPQRIDSASSNKRIIFTYEQCLMYLYHYPDVWYDYA WHA+NGSI+AAIKVFQ
Sbjct: 249 LIAFEKGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDVWYDYALWHASNGSIDAAIKVFQ 308

Query: 241 RALNALP-GNLVPFLFCRYLSS----MSAKKIYESLLSDGINATALAHIQFIRFLRRNEG 300
           RAL ALP  +++ + +     S     +AKKIYESLLSDG+NATALAHIQFIRFLRRNEG
Sbjct: 309 RALKALPDSDMLKYAYAELEESRGSLQAAKKIYESLLSDGVNATALAHIQFIRFLRRNEG 368

Query: 301 VEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKMAHNVFEDGMKRFMNEPTYILEY 360
           VEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPK+AHNVFEDGMKRFMNE TYILEY
Sbjct: 369 VEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKIAHNVFEDGMKRFMNESTYILEY 428

Query: 361 ADFLARLNDDRNIRALFERALSTLPLEESTEVWKRFTHFEQTYGDLASMLKVEKRRKEAL 420
           ADFLARLNDDRNIRALFERALSTLPLEES EVWKRF HFEQTYGDLASMLKVEKRRKEAL
Sbjct: 429 ADFLARLNDDRNIRALFERALSTLPLEESAEVWKRFIHFEQTYGDLASMLKVEKRRKEAL 488

Query: 421 SQMGDDGASTLEGTLQDVVSRYSFMDLWPCSSSDLDNLSRQEWLAKNINKNSEKSVLPSG 480
           SQMG+DGASTLE +LQDVVSRYSFMDLWPC+SSDLDNL+RQEWLAKNI+KNSEKS LP G
Sbjct: 489 SQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQEWLAKNISKNSEKSSLPGG 548

Query: 481 PGFLGNSIVLVLLKHFGHICFCWVSSLLFGSDTGSAGL--HSIPSTKVVYPDTSQMVIYD 540
            GFL                           DTGSAG   HSIPSTKVVYPDTSQMVIYD
Sbjct: 549 TGFL---------------------------DTGSAGFVSHSIPSTKVVYPDTSQMVIYD 608

Query: 541 PSQKLGTYETPEFYPATAGLPANPTTLPNSVSVASVGPTNVFDEILKATPAALIAFLANL 600
           PSQ LG   T      T+GLPANP+   N VSVAS  PTNVFDEILKATPAALIAFLANL
Sbjct: 609 PSQILGILPT----ATTSGLPANPS---NPVSVASGAPTNVFDEILKATPAALIAFLANL 668

Query: 601 PAVDGPTPDVDVVLSVCLESDIPTVPSIKSGATPAQVSAGPVATTTTSDLSGSSKSHAFS 660
           PAVDGPTPD+D+VLSVCLESD+PTVP +KSGATPAQVS GPV   TTSDLSGSSKSHAFS
Sbjct: 669 PAVDGPTPDIDIVLSVCLESDLPTVPLVKSGATPAQVSGGPV--PTTSDLSGSSKSHAFS 728

Query: 661 NSSLKHTRDRQSGKRKDYDRQDDDESTTVQSQPLPRDFFRIRQIQKARGATSSQTGSASY 720
           NSSLKHTRD+QSGKRKDYDRQ+D+ESTTVQSQPLP+DFFRIRQIQKARGATSSQTGSASY
Sbjct: 729 NSSLKHTRDKQSGKRKDYDRQEDNESTTVQSQPLPKDFFRIRQIQKARGATSSQTGSASY 765

[Close]

BLAST of MS017042 vs. NCBI nr
Match: XP_022925033.1 (cleavage stimulation factor subunit 77 [Cucurbita moschata] >XP_022925034.1 cleavage stimulation factor subunit 77 [Cucurbita moschata])

HSP 1 Score: 1157.9 bits (2994), Expect = 0.0e+00
Identity = 607/733 (82.81%), Postives = 641/733 (87.45%), Query Frame = 0


Query: 1   MVINNDDATKQIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG 60
           M+INNDDATKQIFSRCLL CLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG
Sbjct: 69  MIINNDDATKQIFSRCLLTCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG 128

Query: 61  VDIASGPVWMEYIAFLKSLPALSSQEESQRMTAVRKVYQKAIITPTHHIEQLWRDYENFE 120
           VDI+SGPVWMEYIAFLKSLPALSSQEESQRMTA+RKVYQ+AIITPTHHIEQLWRDYENFE
Sbjct: 129 VDISSGPVWMEYIAFLKSLPALSSQEESQRMTAMRKVYQRAIITPTHHIEQLWRDYENFE 188

Query: 121 NS----QAKGLISEYQPKFNSARAVYRERKKYVDEIDCNILAVPPTGSPK-AITFPSYD- 180
           NS     AKGLISEYQPKFNSARAVYRERKKYVDEID N+LAVPPTGSPK  + + S+  
Sbjct: 189 NSVSRQLAKGLISEYQPKFNSARAVYRERKKYVDEIDDNMLAVPPTGSPKEELQWMSWKR 248

Query: 181 MIGGHIGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDVWYDYATWHANNGSIEAAIKVFQ 240
           +I    GNPQRIDS SSNKRIIFTYEQCLMYLYHYPDVWYDYA WHANNGSI+AAIKVFQ
Sbjct: 249 LIAFEKGNPQRIDSTSSNKRIIFTYEQCLMYLYHYPDVWYDYAMWHANNGSIDAAIKVFQ 308

Query: 241 RALNALPG-NLVPFLFCRYLSS----MSAKKIYESLLSDGINATALAHIQFIRFLRRNEG 300
           RAL ALPG +++ + +     S     SAKKIYES+L DGINATAL HIQFIRFLRRNEG
Sbjct: 309 RALKALPGSDMLKYAYAELEESRGSLQSAKKIYESILGDGINATALTHIQFIRFLRRNEG 368

Query: 301 VEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKMAHNVFEDGMKRFMNEPTYILEY 360
           VEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPK+AHN+FEDGMKRFMNE TYILEY
Sbjct: 369 VEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKIAHNIFEDGMKRFMNEATYILEY 428

Query: 361 ADFLARLNDDRNIRALFERALSTLPLEESTEVWKRFTHFEQTYGDLASMLKVEKRRKEAL 420
           ADFLARLNDDRNIRALFERALSTLPLEESTEVWKRF HFEQTYGDLASMLKVEKRRKEAL
Sbjct: 429 ADFLARLNDDRNIRALFERALSTLPLEESTEVWKRFVHFEQTYGDLASMLKVEKRRKEAL 488

Query: 421 SQMGDDGASTLEGTLQDVVSRYSFMDLWPCSSSDLDNLSRQEWLAKNINKNSEKSVLPSG 480
           SQMG+DGASTLE +LQD+VSRYSFMDLWPC+SSDLDNL+RQEWLAKN++KNSEKS+LPSG
Sbjct: 489 SQMGEDGASTLESSLQDIVSRYSFMDLWPCTSSDLDNLARQEWLAKNMSKNSEKSILPSG 548

Query: 481 PGFLGNSIVLVLLKHFGHICFCWVSSLLFGSDTGSAGL--HSIPSTKVVYPDTSQMVIYD 540
            GFL                           DTGSAGL  HS PSTKVVYPDTSQMVIYD
Sbjct: 549 AGFL---------------------------DTGSAGLLSHSNPSTKVVYPDTSQMVIYD 608

Query: 541 PSQKLGTYETPEFYPATAGLPANPTTLPNSVSVASVGPTNVFDEILKATPAALIAFLANL 600
           PSQKLG   T       +GLPANP TL N  SV S GPTNVFDEILKATPAALIAFLANL
Sbjct: 609 PSQKLGMLPT----ATASGLPANPITLSNPASVVSGGPTNVFDEILKATPAALIAFLANL 668

Query: 601 PAVDGPTPDVDVVLSVCLESDIPTVPSIKSGATPAQVSAGPVATTTTSDLSGSSKSHAFS 660
           PAVDGPTPDVD+VLSVCLESDIPTVPS+KSGATPAQ SAGPV TT+    SG+SKSHAFS
Sbjct: 669 PAVDGPTPDVDIVLSVCLESDIPTVPSVKSGATPAQGSAGPVPTTSD---SGTSKSHAFS 728

Query: 661 NSSLKHTRDRQSGKRKDYDRQDDDESTTVQSQPLPRDFFRIRQIQKARGATSSQTGSASY 720
           NSSLKHTRDRQS KRKDYDRQ+D+ESTTVQSQPLP+DFFRIRQIQKARGATSSQTGSASY
Sbjct: 729 NSSLKHTRDRQSAKRKDYDRQEDNESTTVQSQPLPKDFFRIRQIQKARGATSSQTGSASY 767

[Close]

BLAST of MS017042 vs. NCBI nr
Match: XP_038881157.1 (cleavage stimulation factor subunit 77 [Benincasa hispida])

HSP 1 Score: 1156.7 bits (2991), Expect = 0.0e+00
Identity = 612/733 (83.49%), Postives = 641/733 (87.45%), Query Frame = 0


Query: 1   MVINNDDATKQIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG 60
           MV+NNDDAT+QIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG
Sbjct: 69  MVVNNDDATRQIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG 128

Query: 61  VDIASGPVWMEYIAFLKSLPALSSQEESQRMTAVRKVYQKAIITPTHHIEQLWRDYENFE 120
           VDI+SGPVWMEYIAFLKSLPALSSQ ESQRMTAVRKVYQKAIITPTHHIEQLWRDYENFE
Sbjct: 129 VDISSGPVWMEYIAFLKSLPALSSQ-ESQRMTAVRKVYQKAIITPTHHIEQLWRDYENFE 188

Query: 121 NS----QAKGLISEYQPKFNSARAVYRERKKYVDEIDCNILAVPPTGSPK-AITFPSY-D 180
           NS     AKGL+SEYQPKFNSARAVYRERKKYVDEIDCN+LAVPPTGSPK  + + S+  
Sbjct: 189 NSVSRQLAKGLVSEYQPKFNSARAVYRERKKYVDEIDCNMLAVPPTGSPKEELQWMSWRR 248

Query: 181 MIGGHIGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDVWYDYATWHANNGSIEAAIKVFQ 240
           +I    GNPQRIDSASSNKRIIFTYEQCLMYLYHYPDVWYDYA WHANNGS +AAIKVFQ
Sbjct: 249 LIAFEKGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDVWYDYAMWHANNGSTDAAIKVFQ 308

Query: 241 RALNALP-GNLVPFLFCRYLSS----MSAKKIYESLLSDGINATALAHIQFIRFLRRNEG 300
           RAL ALP  +++ + +     S     SAKKIYESLLSDG+NATALAHIQFIRFLRRNEG
Sbjct: 309 RALKALPNSDMLKYAYAELEESRGSLQSAKKIYESLLSDGVNATALAHIQFIRFLRRNEG 368

Query: 301 VEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKMAHNVFEDGMKRFMNEPTYILEY 360
           VEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPK+AHNVFEDGMKRFMNE TYILEY
Sbjct: 369 VEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKIAHNVFEDGMKRFMNESTYILEY 428

Query: 361 ADFLARLNDDRNIRALFERALSTLPLEESTEVWKRFTHFEQTYGDLASMLKVEKRRKEAL 420
           ADFLARLNDDRNIRALFERALSTLPLEES EVWKRF HFEQTYGDLASMLKVEKRRKEAL
Sbjct: 429 ADFLARLNDDRNIRALFERALSTLPLEESAEVWKRFIHFEQTYGDLASMLKVEKRRKEAL 488

Query: 421 SQMGDDGASTLEGTLQDVVSRYSFMDLWPCSSSDLDNLSRQEWLAKNINKNSEKSVLPSG 480
           SQMG+DGASTLE +LQDVVSRYSFMDLWPC+SSDLDNL+RQEWLAKNINKNSEKS LPSG
Sbjct: 489 SQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQEWLAKNINKNSEKSGLPSG 548

Query: 481 PGFLGNSIVLVLLKHFGHICFCWVSSLLFGSDTGSAGL--HSIPSTKVVYPDTSQMVIYD 540
            GFL                           DT SAG   HSIPST VVYPDTSQMVIYD
Sbjct: 549 TGFL---------------------------DTSSAGFMSHSIPSTNVVYPDTSQMVIYD 608

Query: 541 PSQKLGTYETPEFYPATAGLPANPTTLPNSVSVASVGPTNVFDEILKATPAALIAFLANL 600
           PSQKLG   T       +GLPANP+   N VSVAS GPTNVFDEILKATPAALIAFLANL
Sbjct: 609 PSQKLGILPT----ATASGLPANPS---NPVSVASGGPTNVFDEILKATPAALIAFLANL 668

Query: 601 PAVDGPTPDVDVVLSVCLESDIPTVPSIKSGATPAQVSAGPVATTTTSDLSGSSKSHAFS 660
           PAVDGPTPDVD+VLSVCLESDIPTVP +KSGATPAQVS GPV   TTSDLSGSSKSHAFS
Sbjct: 669 PAVDGPTPDVDIVLSVCLESDIPTVPLVKSGATPAQVSGGPV--PTTSDLSGSSKSHAFS 728

Query: 661 NSSLKHTRDRQSGKRKDYDRQDDDESTTVQSQPLPRDFFRIRQIQKARGATSSQTGSASY 720
           NSSLKHTRD+QSGKRKDYDRQ+D+ESTTVQSQPLP+DFFRIRQIQKARGATSSQTGS SY
Sbjct: 729 NSSLKHTRDKQSGKRKDYDRQEDNESTTVQSQPLPKDFFRIRQIQKARGATSSQTGSVSY 764

[Close]

BLAST of MS017042 vs. ExPASy Swiss-Prot
Match: Q8GUP1 (Cleavage stimulation factor subunit 77 OS=Arabidopsis thaliana OX=3702 GN=CSTF77 PE=1 SV=1)

HSP 1 Score: 827.0 bits (2135), Expect = 1.6e-238
Identity = 447/741 (60.32%), Postives = 552/741 (74.49%), Query Frame = 0


Query: 1   MVINNDDATKQIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG 60
           M +NNDDATKQIFSRCLL CL +PLW+CYIRFI+KV ++KG EGQEET KAF+FML+Y+G
Sbjct: 51  MAVNNDDATKQIFSRCLLTCLQVPLWQCYIRFIRKVYDKKGAEGQEETTKAFEFMLNYIG 110

Query: 61  VDIASGPVWMEYIAFLKSLPALSSQEESQRMTAVRKVYQKAIITPTHHIEQLWRDYENFE 120
            DIASGP+W EYIAFLKSLPAL+  E+  R TA+RKVY +AI+TPTHH+EQLW+DYENFE
Sbjct: 111 TDIASGPIWTEYIAFLKSLPALNLNEDLHRKTALRKVYHRAILTPTHHVEQLWKDYENFE 170

Query: 121 NS----QAKGLISEYQPKFNSARAVYRERKKYVDEIDCNILAVPPTGSPKAIT------- 180
           N+     AKGL++EYQPKFNSARAVYRERKKY++EID N+LAVPPTG+ K  T       
Sbjct: 171 NTVNRQLAKGLVNEYQPKFNSARAVYRERKKYIEEIDWNMLAVPPTGTSKEETQWVAWKK 230

Query: 181 FPSYDMIGGHIGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDVWYDYATWHANNGSIEAA 240
           F S++      GNPQRID+ASS KRII+ YEQCLM LYHYPDVWYDYA WH  +GS +AA
Sbjct: 231 FLSFEK-----GNPQRIDTASSTKRIIYAYEQCLMCLYHYPDVWYDYAEWHVKSGSTDAA 290

Query: 241 IKVFQRALNALP-GNLVPFLFCRYLSS----MSAKKIYESLLSDGINATALAHIQFIRFL 300
           IKVFQRAL A+P   ++ + F     S     SAKK+YE++L  G +  +LAHIQ++RFL
Sbjct: 291 IKVFQRALKAIPDSEMLKYAFAEMEESRGAIQSAKKLYENIL--GASTNSLAHIQYLRFL 350

Query: 301 RRNEGVEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKMAHNVFEDGMKRFMNEPT 360
           RR EGVEAARK+FLDARKSP+CTYHVY+A+A MAFC+DK+PK+AHN+FE+G+K +M+EP 
Sbjct: 351 RRAEGVEAARKYFLDARKSPSCTYHVYIAFATMAFCIDKEPKVAHNIFEEGLKLYMSEPV 410

Query: 361 YILEYADFLARLNDDRNIRALFERALSTLPLEESTEVWKRFTHFEQTYGDLASMLKVEKR 420
           YIL+YADFL RLNDDRNIRALFERALSTLP+E+S EVWKRF  FEQTYGDLAS+LKVE+R
Sbjct: 411 YILKYADFLTRLNDDRNIRALFERALSTLPVEDSAEVWKRFIQFEQTYGDLASILKVEQR 470

Query: 421 RKEALSQMGDDGASTLEGTLQDVVSRYSFMDLWPCSSSDLDNLSRQEWLAKNINKNSEKS 480
            KEALS  G++G+S  E +LQDVVSRYS+MDLWPC+S+DLD+L+RQE L KN+NK + K+
Sbjct: 471 MKEALSGKGEEGSSPPESSLQDVVSRYSYMDLWPCTSNDLDHLARQELLVKNLNKKAGKT 530

Query: 481 VLPSGPGFLGNSIVLVLLKHFGHICFCWVSSLLFGSDTGSAGLHSIPSTKVVYPDTSQMV 540
            LP  P  +G+                 V+S                S+KVVYPDTSQMV
Sbjct: 531 NLPHVPAAIGS-----------------VAS----------------SSKVVYPDTSQMV 590

Query: 541 IYDPSQKLGTYETPEFYPATAGLPANPT-TLPNSV-SVASVGPTNVFDEILKATPAALIA 600
           + DP++K       EF  +   + A+ + T P++V + A+ G  + FDEI K TP AL+A
Sbjct: 591 VQDPTKK------SEFASSANPVAASASNTFPSTVTATATHGSASTFDEIPKTTPPALVA 650

Query: 601 FLANLPAVDGPTPDVDVVLSVCLESDIPTVPSIKSGATPAQVSAGPVATTTTSDLSGSSK 660
           FLANLP VDGPTP+VDVVLS+CL+SD PT      G T  Q  A      + +D SG ++
Sbjct: 651 FLANLPIVDGPTPNVDVVLSICLQSDFPT------GQTVKQSFAAKGNPPSQNDPSGPTR 710

Query: 661 SHAFSNSSLKHTRDRQSGKRKDYDRQDDDESTTVQSQPLPRDFFRIRQIQKARG-ATSSQ 720
                  S +  RDR++ KRKD DRQ++D++ TVQSQPLP D FR+RQ++KARG ATSSQ
Sbjct: 711 -----GVSQRLPRDRRATKRKDSDRQEEDDTATVQSQPLPTDVFRLRQMRKARGIATSSQ 734

[Close]

BLAST of MS017042 vs. ExPASy Swiss-Prot
Match: Q12996 (Cleavage stimulation factor subunit 3 OS=Homo sapiens OX=9606 GN=CSTF3 PE=1 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 5.7e-82
Identity = 177/478 (37.03%), Postives = 271/478 (56.69%), Query Frame = 0


Query: 5   NDDATKQIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLGVDIA 64
           N D  +++F RCL+  LHI LW+CY+ ++++  + K    +E+  +A+DF L  +G++I 
Sbjct: 80  NYDKVEKLFQRCLMKVLHIDLWKCYLSYVRE-TKGKLPSYKEKMAQAYDFALDKIGMEIM 139

Query: 65  SGPVWMEYIAFLKSLPALSSQEESQRMTAVRKVYQKAIITPTHHIEQLWRDYENFENS-- 124
           S  +W++YI FLK + A+ S  E+QR+TAVR+VYQ+  + P  +IEQLWRDY  +E    
Sbjct: 140 SYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPMINIEQLWRDYNKYEEGIN 199

Query: 125 --QAKGLISEYQPKFNSARAVYRERKKYVDEIDCNILAVPPTGSPKAITFPSYDMIGGHI 184
              AK +I +    + +AR V +E +  +  +D N  +VPP  +P+       DM   +I
Sbjct: 200 IHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQNTPQEA--QQVDMWKKYI 259

Query: 185 ----GNPQRI-DSASSNKRIIFTYEQCLMYLYHYPDVWYDYATW------------HANN 244
                NP R  D     KR++F YEQCL+ L H+PD+WY+ A +              NN
Sbjct: 260 QWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNN 319

Query: 245 GSI--EAAIKVFQRALNAL--PGNLVPFLFCRYLSSM----SAKKIYESLLSDGINATAL 304
             +  + A  +++RA++ L     L+ F +  Y  S         IY  LL+       L
Sbjct: 320 AKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTL 379

Query: 305 AHIQFIRFLRRNEGVEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKMAHNVFEDG 364
            +IQ+++F RR EG+++ R  F  AR+     +HVYV  A+M +   KD  +A  +FE G
Sbjct: 380 VYIQYMKFARRAEGIKSGRMIFKKAREDTRTRHHVYVTAALMEYYCSKDKSVAFKIFELG 439

Query: 365 MKRFMNEPTYILEYADFLARLNDDRNIRALFERALS--TLPLEESTEVWKRFTHFEQTYG 424
           +K++ + P Y+L Y D+L+ LN+D N R LFER L+  +LP E+S E+W RF  FE   G
Sbjct: 440 LKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIG 499

Query: 425 DLASMLKVEKRRKEALSQMGDDGASTLEGTLQDVVSRYSFMDLWPCSSSDLDNLSRQE 452
           DLAS+LKVEKRR  A  +  +   + L      +V RY FMDL+PCS+S+L  L  ++
Sbjct: 500 DLASILKVEKRRFTAFKEEYEGKETAL------LVDRYKFMDLYPCSASELKALGYKD 548

[Close]

BLAST of MS017042 vs. ExPASy Swiss-Prot
Match: Q5RDW9 (Cleavage stimulation factor subunit 3 OS=Pongo abelii OX=9601 GN=CSTF3 PE=2 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 5.7e-82
Identity = 177/478 (37.03%), Postives = 271/478 (56.69%), Query Frame = 0


Query: 5   NDDATKQIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLGVDIA 64
           N D  +++F RCL+  LHI LW+CY+ ++++  + K    +E+  +A+DF L  +G++I 
Sbjct: 80  NYDKVEKLFQRCLMKVLHIDLWKCYLSYVRE-TKGKLPSYKEKMAQAYDFALDKIGMEIM 139

Query: 65  SGPVWMEYIAFLKSLPALSSQEESQRMTAVRKVYQKAIITPTHHIEQLWRDYENFENS-- 124
           S  +W++YI FLK + A+ S  E+QR+TAVR+VYQ+  + P  +IEQLWRDY  +E    
Sbjct: 140 SYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPMINIEQLWRDYNKYEEGIN 199

Query: 125 --QAKGLISEYQPKFNSARAVYRERKKYVDEIDCNILAVPPTGSPKAITFPSYDMIGGHI 184
              AK +I +    + +AR V +E +  +  +D N  +VPP  +P+       DM   +I
Sbjct: 200 IHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQNTPQEA--QQVDMWKKYI 259

Query: 185 ----GNPQRI-DSASSNKRIIFTYEQCLMYLYHYPDVWYDYATW------------HANN 244
                NP R  D     KR++F YEQCL+ L H+PD+WY+ A +              NN
Sbjct: 260 QWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNN 319

Query: 245 GSI--EAAIKVFQRALNAL--PGNLVPFLFCRYLSSM----SAKKIYESLLSDGINATAL 304
             +  + A  +++RA++ L     L+ F +  Y  S         IY  LL+       L
Sbjct: 320 AKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTL 379

Query: 305 AHIQFIRFLRRNEGVEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKMAHNVFEDG 364
            +IQ+++F RR EG+++ R  F  AR+     +HVYV  A+M +   KD  +A  +FE G
Sbjct: 380 VYIQYMKFARRAEGIKSGRMIFKKAREDTRTRHHVYVTAALMEYYCSKDKSVAFKIFELG 439

Query: 365 MKRFMNEPTYILEYADFLARLNDDRNIRALFERALS--TLPLEESTEVWKRFTHFEQTYG 424
           +K++ + P Y+L Y D+L+ LN+D N R LFER L+  +LP E+S E+W RF  FE   G
Sbjct: 440 LKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIG 499

Query: 425 DLASMLKVEKRRKEALSQMGDDGASTLEGTLQDVVSRYSFMDLWPCSSSDLDNLSRQE 452
           DLAS+LKVEKRR  A  +  +   + L      +V RY FMDL+PCS+S+L  L  ++
Sbjct: 500 DLASILKVEKRRFTAFKEEYEGKETAL------LVDRYKFMDLYPCSASELKALGYKD 548

[Close]

BLAST of MS017042 vs. ExPASy Swiss-Prot
Match: Q99LI7 (Cleavage stimulation factor subunit 3 OS=Mus musculus OX=10090 GN=Cstf3 PE=1 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 7.4e-82
Identity = 177/478 (37.03%), Postives = 271/478 (56.69%), Query Frame = 0


Query: 5   NDDATKQIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLGVDIA 64
           N D  +++F RCL+  LHI LW+CY+ ++++  + K    +E+  +A+DF L  +G++I 
Sbjct: 80  NYDKVEKLFQRCLMKVLHIDLWKCYLSYVRE-TKGKLPSYKEKMAQAYDFALDKIGMEIM 139

Query: 65  SGPVWMEYIAFLKSLPALSSQEESQRMTAVRKVYQKAIITPTHHIEQLWRDYENFENS-- 124
           S  +W++YI FLK + A+ S  E+QR+TAVR+VYQ+  + P  +IEQLWRDY  +E    
Sbjct: 140 SYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPMINIEQLWRDYNKYEEGIN 199

Query: 125 --QAKGLISEYQPKFNSARAVYRERKKYVDEIDCNILAVPPTGSPKAITFPSYDMIGGHI 184
              AK +I +    + +AR V +E +  +  +D N  +VPP  +P+       DM   +I
Sbjct: 200 IHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQNTPQEA--QQVDMWKKYI 259

Query: 185 ----GNPQRI-DSASSNKRIIFTYEQCLMYLYHYPDVWYDYATW------------HANN 244
                NP R  D     KR++F YEQCL+ L H+PD+WY+ A +              NN
Sbjct: 260 QWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNN 319

Query: 245 GSI--EAAIKVFQRALNAL--PGNLVPFLFCRYLSSM----SAKKIYESLLSDGINATAL 304
             +  + A  +++RA++ L     L+ F +  Y  S         IY  LL+       L
Sbjct: 320 AKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTL 379

Query: 305 AHIQFIRFLRRNEGVEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKMAHNVFEDG 364
            +IQ+++F RR EG+++ R  F  AR+     +HVYV  A+M +   KD  +A  +FE G
Sbjct: 380 VYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELG 439

Query: 365 MKRFMNEPTYILEYADFLARLNDDRNIRALFERALS--TLPLEESTEVWKRFTHFEQTYG 424
           +K++ + P Y+L Y D+L+ LN+D N R LFER L+  +LP E+S E+W RF  FE   G
Sbjct: 440 LKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIG 499

Query: 425 DLASMLKVEKRRKEALSQMGDDGASTLEGTLQDVVSRYSFMDLWPCSSSDLDNLSRQE 452
           DLAS+LKVEKRR  A  +  +   + L      +V RY FMDL+PCS+S+L  L  ++
Sbjct: 500 DLASILKVEKRRFTAFREEYEGKETAL------LVDRYKFMDLYPCSASELKALGYKD 548

[Close]

BLAST of MS017042 vs. ExPASy Swiss-Prot
Match: P25991 (Protein suppressor of forked OS=Drosophila melanogaster OX=7227 GN=su(f) PE=1 SV=2)

HSP 1 Score: 253.8 bits (647), Expect = 5.7e-66
Identity = 209/765 (27.32%), Postives = 350/765 (45.75%), Query Frame = 0


Query: 7   DATKQIFSRCLLNCLHIPLWRCYIRFIKKVNERKGME-GQEETRKAFDFMLSYLGVDIAS 66
           +  +++F RCL+  L+I LW+ Y+ ++K+   + G+   +E+  +A+DF L  +G+D+ S
Sbjct: 83  ERVEKLFQRCLVKILNIDLWKLYLTYVKET--KSGLSTHKEKMAQAYDFALEKIGMDLHS 142

Query: 67  GPVWMEYIAFLKSLPALSSQEESQRMTAVRKVYQKAIITPTHHIEQLWRDYENFENS--- 126
             +W +YI FL+ + A+ +  E+Q++TAVR+VYQKA++TP   IEQLW+DY  FE +   
Sbjct: 143 FSIWQDYIYFLRGVEAVGNYAENQKITAVRRVYQKAVVTPIVGIEQLWKDYIAFEQNINP 202

Query: 127 -QAKGLISEYQPKFNSARAVYRERKKYVDEIDCNILAVPPTGSPKAI-------TFPSYD 186
             ++ +  E    + +AR V +E + +   ++ N+ AVPPT + + +        F +Y+
Sbjct: 203 IISEKMSLERSKDYMNARRVAKELEYHTKGLNRNLPAVPPTLTKEEVKQVELWKRFITYE 262

Query: 187 MIGGHIGNPQRI-DSASSNKRIIFTYEQCLMYLYHYPDVWYD------------------ 246
                  NP R  D+A   +R++F  EQCL+ L H+P VW+                   
Sbjct: 263 K-----SNPLRTEDTALVTRRVMFATEQCLLVLTHHPAVWHQASQFLDTSARVLTEKGVR 322

Query: 247 -----------------------YATWHANNGSIEAA-------IKVFQRALNALPGN-- 306
                                  +A W A +  ++AA         + +R++N +     
Sbjct: 323 TSVENISPILCVPVVNQIEWVMAFAWWWAKD--VQAAKIFADECANILERSINGVLNRNA 382

Query: 307 LVPFLFCRY----LSSMSAKKIYESLLSDGINATALAHIQFIRFLRRNEGVEAARKHFLD 366
           L+ F +  +    L       +Y  LL        L ++Q+++F RR EG+++AR  F  
Sbjct: 383 LLYFAYADFEEGRLKYEKVHTMYNKLLQLPDIDPTLVYVQYMKFARRAEGIKSARSIFKK 442

Query: 367 ARKSPNCTYHVYVAYAMMAFCLDKDPKMAHNVFEDGMKRFMNEPTYILEYADFLARLNDD 426
           AR+     YH++VA A+M +   KD ++A  +FE G+KRF   P Y++ Y D+L+ LN+D
Sbjct: 443 AREDVRSRYHIFVAAALMEYYCSKDKEIAFRIFELGLKRFGGSPEYVMCYIDYLSHLNED 502

Query: 427 RNIRALFERALST--LPLEESTEVWKRFTHFEQTYGDLASMLKVEKRRKEALSQMGD-DG 486
            N R LFER LS+  L   +S EVW RF  FE   GDL+S++KVE+RR      + + +G
Sbjct: 503 NNTRVLFERVLSSGGLSPHKSVEVWNRFLEFESNIGDLSSIVKVERRRSAVFENLKEYEG 562

Query: 487 ASTLEGTLQDVVSRYSFMDLWPCSSSDLDNLSRQEWLAKNINKNSEKSVLPSGPGFLGNS 546
             T +     +V RY F+DL+PC+S++L ++   E +   +NK                 
Sbjct: 563 KETAQ-----LVDRYKFLDLYPCTSTELKSIGYAENVGIILNK----------------- 622

Query: 547 IVLVLLKHFGHICFCWVSSLLFGSDTGSAGLHSIPSTKVVYPDTSQMVIYDPSQKLGTYE 606
                           V       +TG     S  +  +  PD SQM+ + P        
Sbjct: 623 ----------------VGGGAQSQNTGEVETDSEATPPLPRPDFSQMIPFKP-------- 682

Query: 607 TPEFYPATAGLPANPTTLPNSVSVASVGPTNVFDEILKATPAALIAFLANLP---AVDGP 666
                         P   P +  +A      VF +     P AL A  A LP   +  GP
Sbjct: 683 -------------RPCAHPGAHPLAG----GVFPQ-----PPALAALCATLPPPNSFRGP 742

Query: 667 TPDVDVVLSVCLESDIPTVPSIKSGATPAQVSAGPVATTT-----TSDLSGSSKSHAFSN 694
              V+++  + +  ++P      +G          +A +      TS  +G    H+ + 
Sbjct: 743 FVSVELLFDIFMRLNLPDSAPQPNGDNELSPKIFDLAKSVHWIVDTSTYTG--VQHSVTA 760

[Close]

BLAST of MS017042 vs. ExPASy TrEMBL
Match: A0A6J1DNS9 (cleavage stimulation factor subunit 77 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021740 PE=4 SV=1)

HSP 1 Score: 1238.8 bits (3204), Expect = 0.0e+00
Identity = 650/731 (88.92%), Postives = 661/731 (90.42%), Query Frame = 0


Query: 1   MVINNDDATKQIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG 60
           MVINNDDATKQIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG
Sbjct: 69  MVINNDDATKQIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG 128

Query: 61  VDIASGPVWMEYIAFLKSLPALSSQEESQRMTAVRKVYQKAIITPTHHIEQLWRDYENFE 120
           VDIASGPVWMEYIAFLKSLPALSSQEESQRMTAVRKVYQKAIITPTHHIEQLWRDYENFE
Sbjct: 129 VDIASGPVWMEYIAFLKSLPALSSQEESQRMTAVRKVYQKAIITPTHHIEQLWRDYENFE 188

Query: 121 NS----QAKGLISEYQPKFNSARAVYRERKKYVDEIDCNILAVPPTGSPK-AITFPSYD- 180
           NS     AKGLISEYQPKFNSARAVYRERKKYVDEIDCNILAVPPTGSPK  + + S+  
Sbjct: 189 NSVSRQLAKGLISEYQPKFNSARAVYRERKKYVDEIDCNILAVPPTGSPKEELQWMSWKR 248

Query: 181 MIGGHIGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDVWYDYATWHANNGSIEAAIKVFQ 240
           +I    GNPQRIDSASSNKRIIFTYEQCLMYLYHYPDVWYDYATWHANNGSIEAAIKVFQ
Sbjct: 249 LIAFEKGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDVWYDYATWHANNGSIEAAIKVFQ 308

Query: 241 RALNALP-GNLVPFLFCRYLSS----MSAKKIYESLLSDGINATALAHIQFIRFLRRNEG 300
           RALNALP  +++ + +     S     SAKKIYESLLSDGINATALAHIQFIRFLRRNEG
Sbjct: 309 RALNALPDSDMLKYAYAELEESRGTLQSAKKIYESLLSDGINATALAHIQFIRFLRRNEG 368

Query: 301 VEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKMAHNVFEDGMKRFMNEPTYILEY 360
           VEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKMAHNVFEDGMKRFMNEPTYILEY
Sbjct: 369 VEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKMAHNVFEDGMKRFMNEPTYILEY 428

Query: 361 ADFLARLNDDRNIRALFERALSTLPLEESTEVWKRFTHFEQTYGDLASMLKVEKRRKEAL 420
           ADFLARLNDDRNIRALFERALSTLPLEESTEVWK+FTHFEQTYGDLASMLKVEKRRKEAL
Sbjct: 429 ADFLARLNDDRNIRALFERALSTLPLEESTEVWKQFTHFEQTYGDLASMLKVEKRRKEAL 488

Query: 421 SQMGDDGASTLEGTLQDVVSRYSFMDLWPCSSSDLDNLSRQEWLAKNINKNSEKSVLPSG 480
           SQMGDDGASTLEGTLQDVVSRYSFMDLWPCSSSDLDNLSRQEWLAKNINKNSEKSVLPSG
Sbjct: 489 SQMGDDGASTLEGTLQDVVSRYSFMDLWPCSSSDLDNLSRQEWLAKNINKNSEKSVLPSG 548

Query: 481 PGFLGNSIVLVLLKHFGHICFCWVSSLLFGSDTGSAGLHSIPSTKVVYPDTSQMVIYDPS 540
           PGFL                           DTGSAGLHSIPSTKVVYPDTSQMVIYDPS
Sbjct: 549 PGFL---------------------------DTGSAGLHSIPSTKVVYPDTSQMVIYDPS 608

Query: 541 QKLGTYETPEFYPATAGLPANPTTLPNSVSVASVGPTNVFDEILKATPAALIAFLANLPA 600
           QKL            AGLPANPTTLPNSVSV S GPTNVFDEILKATPAALIAFLANLPA
Sbjct: 609 QKL-----------AAGLPANPTTLPNSVSVVSGGPTNVFDEILKATPAALIAFLANLPA 668

Query: 601 VDGPTPDVDVVLSVCLESDIPTVPSIKSGATPAQVSAGPVATTTTSDLSGSSKSHAFSNS 660
           VDGPTPDVDVVLSVCLESDIPT+PSIKSGATPAQVSAGPVATTTTSDLSGSSKSHAFSNS
Sbjct: 669 VDGPTPDVDVVLSVCLESDIPTIPSIKSGATPAQVSAGPVATTTTSDLSGSSKSHAFSNS 728

Query: 661 SLKHTRDRQSGKRKDYDRQDDDESTTVQSQPLPRDFFRIRQIQKARGATSSQTGSASYGS 720
           SLKHTRDRQSGKRKDYDRQDDDESTTVQSQPLPRDFFRIRQIQKARGATSSQTGSASYGS
Sbjct: 729 SLKHTRDRQSGKRKDYDRQDDDESTTVQSQPLPRDFFRIRQIQKARGATSSQTGSASYGS 761

[Close]

BLAST of MS017042 vs. ExPASy TrEMBL
Match: A0A6J1DLS0 (cleavage stimulation factor subunit 77 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021740 PE=4 SV=1)

HSP 1 Score: 1226.8 bits (3173), Expect = 0.0e+00
Identity = 645/731 (88.24%), Postives = 656/731 (89.74%), Query Frame = 0


Query: 1   MVINNDDATKQIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG 60
           MVINNDDATKQIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG
Sbjct: 69  MVINNDDATKQIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG 128

Query: 61  VDIASGPVWMEYIAFLKSLPALSSQEESQRMTAVRKVYQKAIITPTHHIEQLWRDYENFE 120
           VDIASGPVWMEYIAFLKSLPALSSQEESQRMTAVRKVYQKAIITPTHHIEQLWRDYENFE
Sbjct: 129 VDIASGPVWMEYIAFLKSLPALSSQEESQRMTAVRKVYQKAIITPTHHIEQLWRDYENFE 188

Query: 121 NS----QAKGLISEYQPKFNSARAVYRERKKYVDEIDCNILAVPPTGSPK-AITFPSYD- 180
           NS     AKGLISEYQPKFNSARAVYRERKKYVDEIDCNILAVPPTGSPK  + + S+  
Sbjct: 189 NSVSRQLAKGLISEYQPKFNSARAVYRERKKYVDEIDCNILAVPPTGSPKEELQWMSWKR 248

Query: 181 MIGGHIGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDVWYDYATWHANNGSIEAAIKVFQ 240
           +I    GNPQRIDSASSNKRIIFTYEQCLMYLYHYPDVWYDYATWHANNGSIEAAIKVFQ
Sbjct: 249 LIAFEKGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDVWYDYATWHANNGSIEAAIKVFQ 308

Query: 241 RALNALP-GNLVPFLFCRYLSS----MSAKKIYESLLSDGINATALAHIQFIRFLRRNEG 300
           RALNALP  +++ + +     S     SAKKIYESLLSDGINATALAHIQFIRFLRRNEG
Sbjct: 309 RALNALPDSDMLKYAYAELEESRGTLQSAKKIYESLLSDGINATALAHIQFIRFLRRNEG 368

Query: 301 VEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKMAHNVFEDGMKRFMNEPTYILEY 360
           VEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKMAHNVFEDGMKRFMNEPTYILEY
Sbjct: 369 VEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKMAHNVFEDGMKRFMNEPTYILEY 428

Query: 361 ADFLARLNDDRNIRALFERALSTLPLEESTEVWKRFTHFEQTYGDLASMLKVEKRRKEAL 420
           ADFLARLNDDRNIRALFERALSTLPLEESTEVWK+FTHFEQTYGDLASMLKVEKRRKEAL
Sbjct: 429 ADFLARLNDDRNIRALFERALSTLPLEESTEVWKQFTHFEQTYGDLASMLKVEKRRKEAL 488

Query: 421 SQMGDDGASTLEGTLQDVVSRYSFMDLWPCSSSDLDNLSRQEWLAKNINKNSEKSVLPSG 480
           SQMGDDGASTLEGTLQDVVSRYSFMDLWPCSSSDLDNLSRQEWLAKNINKNSEKSVLPSG
Sbjct: 489 SQMGDDGASTLEGTLQDVVSRYSFMDLWPCSSSDLDNLSRQEWLAKNINKNSEKSVLPSG 548

Query: 481 PGFLGNSIVLVLLKHFGHICFCWVSSLLFGSDTGSAGLHSIPSTKVVYPDTSQMVIYDPS 540
           PGFL                                GLHSIPSTKVVYPDTSQMVIYDPS
Sbjct: 549 PGFL--------------------------------GLHSIPSTKVVYPDTSQMVIYDPS 608

Query: 541 QKLGTYETPEFYPATAGLPANPTTLPNSVSVASVGPTNVFDEILKATPAALIAFLANLPA 600
           QKL            AGLPANPTTLPNSVSV S GPTNVFDEILKATPAALIAFLANLPA
Sbjct: 609 QKL-----------AAGLPANPTTLPNSVSVVSGGPTNVFDEILKATPAALIAFLANLPA 668

Query: 601 VDGPTPDVDVVLSVCLESDIPTVPSIKSGATPAQVSAGPVATTTTSDLSGSSKSHAFSNS 660
           VDGPTPDVDVVLSVCLESDIPT+PSIKSGATPAQVSAGPVATTTTSDLSGSSKSHAFSNS
Sbjct: 669 VDGPTPDVDVVLSVCLESDIPTIPSIKSGATPAQVSAGPVATTTTSDLSGSSKSHAFSNS 728

Query: 661 SLKHTRDRQSGKRKDYDRQDDDESTTVQSQPLPRDFFRIRQIQKARGATSSQTGSASYGS 720
           SLKHTRDRQSGKRKDYDRQDDDESTTVQSQPLPRDFFRIRQIQKARGATSSQTGSASYGS
Sbjct: 729 SLKHTRDRQSGKRKDYDRQDDDESTTVQSQPLPRDFFRIRQIQKARGATSSQTGSASYGS 756

[Close]

BLAST of MS017042 vs. ExPASy TrEMBL
Match: A0A1S3B5G2 (cleavage stimulation factor subunit 77 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486027 PE=4 SV=1)

HSP 1 Score: 1158.7 bits (2996), Expect = 0.0e+00
Identity = 609/733 (83.08%), Postives = 643/733 (87.72%), Query Frame = 0


Query: 1   MVINNDDATKQIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG 60
           MV+NNDDAT+QIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG
Sbjct: 69  MVVNNDDATRQIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG 128

Query: 61  VDIASGPVWMEYIAFLKSLPALSSQEESQRMTAVRKVYQKAIITPTHHIEQLWRDYENFE 120
           VDI+SGPVWMEYIAFLKSLPALSSQEES RMTAVRKVYQKAIITPTHHIEQLWRDYENFE
Sbjct: 129 VDISSGPVWMEYIAFLKSLPALSSQEESHRMTAVRKVYQKAIITPTHHIEQLWRDYENFE 188

Query: 121 NS----QAKGLISEYQPKFNSARAVYRERKKYVDEIDCNILAVPPTGSPK-AITFPSY-D 180
           NS     AKGL+SEYQPKFNSARAVYRERKKYVDEIDCN+LAVPPTGSPK  + + S+  
Sbjct: 189 NSVSRQLAKGLVSEYQPKFNSARAVYRERKKYVDEIDCNMLAVPPTGSPKEELQWMSWRR 248

Query: 181 MIGGHIGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDVWYDYATWHANNGSIEAAIKVFQ 240
           +I    GNPQRIDSASSNKRIIFTYEQCLMYLYHYPDVWYDYA WHA+NGSI+AAIKVFQ
Sbjct: 249 LIAFEKGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDVWYDYALWHASNGSIDAAIKVFQ 308

Query: 241 RALNALP-GNLVPFLFCRYLSS----MSAKKIYESLLSDGINATALAHIQFIRFLRRNEG 300
           RAL ALP  +++ + +     S     +AKKIYESLLSDG+NATALAHIQFIRFLRRNEG
Sbjct: 309 RALKALPDSDMLKYAYAELEESRGSLQAAKKIYESLLSDGVNATALAHIQFIRFLRRNEG 368

Query: 301 VEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKMAHNVFEDGMKRFMNEPTYILEY 360
           VEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPK+AHNVFEDGMKRFMNE TYILEY
Sbjct: 369 VEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKIAHNVFEDGMKRFMNESTYILEY 428

Query: 361 ADFLARLNDDRNIRALFERALSTLPLEESTEVWKRFTHFEQTYGDLASMLKVEKRRKEAL 420
           ADFLARLNDDRNIRALFERALSTLPLEES EVWKRF HFEQTYGDLASMLKVEKRRKEAL
Sbjct: 429 ADFLARLNDDRNIRALFERALSTLPLEESAEVWKRFIHFEQTYGDLASMLKVEKRRKEAL 488

Query: 421 SQMGDDGASTLEGTLQDVVSRYSFMDLWPCSSSDLDNLSRQEWLAKNINKNSEKSVLPSG 480
           SQMG+DGASTLE +LQDVVSRYSFMDLWPC+SSDLDNL+RQEWLAKNI+KNSEKS LP G
Sbjct: 489 SQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQEWLAKNISKNSEKSSLPGG 548

Query: 481 PGFLGNSIVLVLLKHFGHICFCWVSSLLFGSDTGSAGL--HSIPSTKVVYPDTSQMVIYD 540
            GFL                           DTGSAG   HSIPSTKVVYPDTSQMVIYD
Sbjct: 549 TGFL---------------------------DTGSAGFVSHSIPSTKVVYPDTSQMVIYD 608

Query: 541 PSQKLGTYETPEFYPATAGLPANPTTLPNSVSVASVGPTNVFDEILKATPAALIAFLANL 600
           PSQ LG   T      T+GLPANP+   N VSVAS  PTNVFDEILKATPAALIAFLANL
Sbjct: 609 PSQILGILPT----ATTSGLPANPS---NPVSVASGAPTNVFDEILKATPAALIAFLANL 668

Query: 601 PAVDGPTPDVDVVLSVCLESDIPTVPSIKSGATPAQVSAGPVATTTTSDLSGSSKSHAFS 660
           PAVDGPTPD+D+VLSVCLESD+PTVP +KSGATPAQVS GPV   TTSDLSGSSKSHAFS
Sbjct: 669 PAVDGPTPDIDIVLSVCLESDLPTVPLVKSGATPAQVSGGPV--PTTSDLSGSSKSHAFS 728

Query: 661 NSSLKHTRDRQSGKRKDYDRQDDDESTTVQSQPLPRDFFRIRQIQKARGATSSQTGSASY 720
           NSSLKHTRD+QSGKRKDYDRQ+D+ESTTVQSQPLP+DFFRIRQIQKARGATSSQTGSASY
Sbjct: 729 NSSLKHTRDKQSGKRKDYDRQEDNESTTVQSQPLPKDFFRIRQIQKARGATSSQTGSASY 765

[Close]

BLAST of MS017042 vs. ExPASy TrEMBL
Match: A0A6J1EAY7 (cleavage stimulation factor subunit 77 OS=Cucurbita moschata OX=3662 GN=LOC111432400 PE=4 SV=1)

HSP 1 Score: 1157.9 bits (2994), Expect = 0.0e+00
Identity = 607/733 (82.81%), Postives = 641/733 (87.45%), Query Frame = 0


Query: 1   MVINNDDATKQIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG 60
           M+INNDDATKQIFSRCLL CLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG
Sbjct: 69  MIINNDDATKQIFSRCLLTCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG 128

Query: 61  VDIASGPVWMEYIAFLKSLPALSSQEESQRMTAVRKVYQKAIITPTHHIEQLWRDYENFE 120
           VDI+SGPVWMEYIAFLKSLPALSSQEESQRMTA+RKVYQ+AIITPTHHIEQLWRDYENFE
Sbjct: 129 VDISSGPVWMEYIAFLKSLPALSSQEESQRMTAMRKVYQRAIITPTHHIEQLWRDYENFE 188

Query: 121 NS----QAKGLISEYQPKFNSARAVYRERKKYVDEIDCNILAVPPTGSPK-AITFPSYD- 180
           NS     AKGLISEYQPKFNSARAVYRERKKYVDEID N+LAVPPTGSPK  + + S+  
Sbjct: 189 NSVSRQLAKGLISEYQPKFNSARAVYRERKKYVDEIDDNMLAVPPTGSPKEELQWMSWKR 248

Query: 181 MIGGHIGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDVWYDYATWHANNGSIEAAIKVFQ 240
           +I    GNPQRIDS SSNKRIIFTYEQCLMYLYHYPDVWYDYA WHANNGSI+AAIKVFQ
Sbjct: 249 LIAFEKGNPQRIDSTSSNKRIIFTYEQCLMYLYHYPDVWYDYAMWHANNGSIDAAIKVFQ 308

Query: 241 RALNALPG-NLVPFLFCRYLSS----MSAKKIYESLLSDGINATALAHIQFIRFLRRNEG 300
           RAL ALPG +++ + +     S     SAKKIYES+L DGINATAL HIQFIRFLRRNEG
Sbjct: 309 RALKALPGSDMLKYAYAELEESRGSLQSAKKIYESILGDGINATALTHIQFIRFLRRNEG 368

Query: 301 VEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKMAHNVFEDGMKRFMNEPTYILEY 360
           VEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPK+AHN+FEDGMKRFMNE TYILEY
Sbjct: 369 VEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKIAHNIFEDGMKRFMNEATYILEY 428

Query: 361 ADFLARLNDDRNIRALFERALSTLPLEESTEVWKRFTHFEQTYGDLASMLKVEKRRKEAL 420
           ADFLARLNDDRNIRALFERALSTLPLEESTEVWKRF HFEQTYGDLASMLKVEKRRKEAL
Sbjct: 429 ADFLARLNDDRNIRALFERALSTLPLEESTEVWKRFVHFEQTYGDLASMLKVEKRRKEAL 488

Query: 421 SQMGDDGASTLEGTLQDVVSRYSFMDLWPCSSSDLDNLSRQEWLAKNINKNSEKSVLPSG 480
           SQMG+DGASTLE +LQD+VSRYSFMDLWPC+SSDLDNL+RQEWLAKN++KNSEKS+LPSG
Sbjct: 489 SQMGEDGASTLESSLQDIVSRYSFMDLWPCTSSDLDNLARQEWLAKNMSKNSEKSILPSG 548

Query: 481 PGFLGNSIVLVLLKHFGHICFCWVSSLLFGSDTGSAGL--HSIPSTKVVYPDTSQMVIYD 540
            GFL                           DTGSAGL  HS PSTKVVYPDTSQMVIYD
Sbjct: 549 AGFL---------------------------DTGSAGLLSHSNPSTKVVYPDTSQMVIYD 608

Query: 541 PSQKLGTYETPEFYPATAGLPANPTTLPNSVSVASVGPTNVFDEILKATPAALIAFLANL 600
           PSQKLG   T       +GLPANP TL N  SV S GPTNVFDEILKATPAALIAFLANL
Sbjct: 609 PSQKLGMLPT----ATASGLPANPITLSNPASVVSGGPTNVFDEILKATPAALIAFLANL 668

Query: 601 PAVDGPTPDVDVVLSVCLESDIPTVPSIKSGATPAQVSAGPVATTTTSDLSGSSKSHAFS 660
           PAVDGPTPDVD+VLSVCLESDIPTVPS+KSGATPAQ SAGPV TT+    SG+SKSHAFS
Sbjct: 669 PAVDGPTPDVDIVLSVCLESDIPTVPSVKSGATPAQGSAGPVPTTSD---SGTSKSHAFS 728

Query: 661 NSSLKHTRDRQSGKRKDYDRQDDDESTTVQSQPLPRDFFRIRQIQKARGATSSQTGSASY 720
           NSSLKHTRDRQS KRKDYDRQ+D+ESTTVQSQPLP+DFFRIRQIQKARGATSSQTGSASY
Sbjct: 729 NSSLKHTRDRQSAKRKDYDRQEDNESTTVQSQPLPKDFFRIRQIQKARGATSSQTGSASY 767

[Close]

BLAST of MS017042 vs. ExPASy TrEMBL
Match: A0A0A0KZK4 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G594420 PE=4 SV=1)

HSP 1 Score: 1152.9 bits (2981), Expect = 0.0e+00
Identity = 607/733 (82.81%), Postives = 641/733 (87.45%), Query Frame = 0


Query: 1   MVINNDDATKQIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG 60
           MV+NNDDAT+QIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG
Sbjct: 1   MVVNNDDATRQIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG 60

Query: 61  VDIASGPVWMEYIAFLKSLPALSSQEESQRMTAVRKVYQKAIITPTHHIEQLWRDYENFE 120
           VDI+SGPVWMEYIAFLKSLPALSSQEES RMTAVRKVYQKAIITPTHHIEQLWRDYENFE
Sbjct: 61  VDISSGPVWMEYIAFLKSLPALSSQEESHRMTAVRKVYQKAIITPTHHIEQLWRDYENFE 120

Query: 121 NS----QAKGLISEYQPKFNSARAVYRERKKYVDEIDCNILAVPPTGSPK-AITFPSY-D 180
           NS     AKGL+SEYQPKFNSARAVYRERKKYVDEIDCN+LAVPPTGS K  + + S+  
Sbjct: 121 NSVSRQLAKGLVSEYQPKFNSARAVYRERKKYVDEIDCNMLAVPPTGSSKEELQWMSWRR 180

Query: 181 MIGGHIGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDVWYDYATWHANNGSIEAAIKVFQ 240
           +I    GNPQRIDSASSNKRIIFTYEQCLMYLYHYPDVWYDYA WHA+NGSI+AAIKVFQ
Sbjct: 181 LIAFEKGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDVWYDYAMWHASNGSIDAAIKVFQ 240

Query: 241 RALNALP-GNLVPFLFCRYLSS----MSAKKIYESLLSDGINATALAHIQFIRFLRRNEG 300
           RAL ALP  +++ F +     S     SAKKIYESLLSDG+NATALAHIQFIRFLRRNEG
Sbjct: 241 RALKALPDSDMLKFAYAELEESRGSLQSAKKIYESLLSDGVNATALAHIQFIRFLRRNEG 300

Query: 301 VEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKMAHNVFEDGMKRFMNEPTYILEY 360
           VEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPK+AHNVFEDGMKRFMNEPTYIL+Y
Sbjct: 301 VEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKIAHNVFEDGMKRFMNEPTYILKY 360

Query: 361 ADFLARLNDDRNIRALFERALSTLPLEESTEVWKRFTHFEQTYGDLASMLKVEKRRKEAL 420
           ADFLARLNDDRNIRALFERALSTLPLEES EVWKRF HFEQTYGDLASMLKVEKRRKEAL
Sbjct: 361 ADFLARLNDDRNIRALFERALSTLPLEESAEVWKRFIHFEQTYGDLASMLKVEKRRKEAL 420

Query: 421 SQMGDDGASTLEGTLQDVVSRYSFMDLWPCSSSDLDNLSRQEWLAKNINKNSEKSVLPSG 480
           SQ G+DGASTLE +LQDVVSRYSFMDLWPC+SSDLDNL+RQEWLAKNI+KNSEKS LP G
Sbjct: 421 SQTGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQEWLAKNISKNSEKSSLPGG 480

Query: 481 PGFLGNSIVLVLLKHFGHICFCWVSSLLFGSDTGSAGL--HSIPSTKVVYPDTSQMVIYD 540
            GFL                           DTGSAG   HSIPSTKVVYPDTSQMVIYD
Sbjct: 481 TGFL---------------------------DTGSAGFMSHSIPSTKVVYPDTSQMVIYD 540

Query: 541 PSQKLGTYETPEFYPATAGLPANPTTLPNSVSVASVGPTNVFDEILKATPAALIAFLANL 600
           PSQ LG   T       +GLPANP+   N VSVAS  PT+VFDEILKATPAALIAFLANL
Sbjct: 541 PSQILGILPT----ATASGLPANPS---NPVSVASGAPTSVFDEILKATPAALIAFLANL 600

Query: 601 PAVDGPTPDVDVVLSVCLESDIPTVPSIKSGATPAQVSAGPVATTTTSDLSGSSKSHAFS 660
           PAVDGPTPDVD+VLSVCLESD+PTVP +KSGATPAQVS GPV   TTSDLSGSSKSHAFS
Sbjct: 601 PAVDGPTPDVDIVLSVCLESDLPTVPLVKSGATPAQVSGGPV--PTTSDLSGSSKSHAFS 660

Query: 661 NSSLKHTRDRQSGKRKDYDRQDDDESTTVQSQPLPRDFFRIRQIQKARGATSSQTGSASY 720
           NSSLKHTRD+QSGKRKDYDRQ+D+ESTTVQSQP+P+DFFRIRQIQKARGATSSQTGSASY
Sbjct: 661 NSSLKHTRDKQSGKRKDYDRQEDNESTTVQSQPMPKDFFRIRQIQKARGATSSQTGSASY 697

[Close]

BLAST of MS017042 vs. TAIR 10
Match: AT1G17760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 827.0 bits (2135), Expect = 1.2e-239
Identity = 447/741 (60.32%), Postives = 552/741 (74.49%), Query Frame = 0


Query: 1   MVINNDDATKQIFSRCLLNCLHIPLWRCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLG 60
           M +NNDDATKQIFSRCLL CL +PLW+CYIRFI+KV ++KG EGQEET KAF+FML+Y+G
Sbjct: 51  MAVNNDDATKQIFSRCLLTCLQVPLWQCYIRFIRKVYDKKGAEGQEETTKAFEFMLNYIG 110

Query: 61  VDIASGPVWMEYIAFLKSLPALSSQEESQRMTAVRKVYQKAIITPTHHIEQLWRDYENFE 120
            DIASGP+W EYIAFLKSLPAL+  E+  R TA+RKVY +AI+TPTHH+EQLW+DYENFE
Sbjct: 111 TDIASGPIWTEYIAFLKSLPALNLNEDLHRKTALRKVYHRAILTPTHHVEQLWKDYENFE 170

Query: 121 NS----QAKGLISEYQPKFNSARAVYRERKKYVDEIDCNILAVPPTGSPKAIT------- 180
           N+     AKGL++EYQPKFNSARAVYRERKKY++EID N+LAVPPTG+ K  T       
Sbjct: 171 NTVNRQLAKGLVNEYQPKFNSARAVYRERKKYIEEIDWNMLAVPPTGTSKEETQWVAWKK 230

Query: 181 FPSYDMIGGHIGNPQRIDSASSNKRIIFTYEQCLMYLYHYPDVWYDYATWHANNGSIEAA 240
           F S++      GNPQRID+ASS KRII+ YEQCLM LYHYPDVWYDYA WH  +GS +AA
Sbjct: 231 FLSFEK-----GNPQRIDTASSTKRIIYAYEQCLMCLYHYPDVWYDYAEWHVKSGSTDAA 290

Query: 241 IKVFQRALNALP-GNLVPFLFCRYLSS----MSAKKIYESLLSDGINATALAHIQFIRFL 300
           IKVFQRAL A+P   ++ + F     S     SAKK+YE++L  G +  +LAHIQ++RFL
Sbjct: 291 IKVFQRALKAIPDSEMLKYAFAEMEESRGAIQSAKKLYENIL--GASTNSLAHIQYLRFL 350

Query: 301 RRNEGVEAARKHFLDARKSPNCTYHVYVAYAMMAFCLDKDPKMAHNVFEDGMKRFMNEPT 360
           RR EGVEAARK+FLDARKSP+CTYHVY+A+A MAFC+DK+PK+AHN+FE+G+K +M+EP 
Sbjct: 351 RRAEGVEAARKYFLDARKSPSCTYHVYIAFATMAFCIDKEPKVAHNIFEEGLKLYMSEPV 410

Query: 361 YILEYADFLARLNDDRNIRALFERALSTLPLEESTEVWKRFTHFEQTYGDLASMLKVEKR 420
           YIL+YADFL RLNDDRNIRALFERALSTLP+E+S EVWKRF  FEQTYGDLAS+LKVE+R
Sbjct: 411 YILKYADFLTRLNDDRNIRALFERALSTLPVEDSAEVWKRFIQFEQTYGDLASILKVEQR 470

Query: 421 RKEALSQMGDDGASTLEGTLQDVVSRYSFMDLWPCSSSDLDNLSRQEWLAKNINKNSEKS 480
            KEALS  G++G+S  E +LQDVVSRYS+MDLWPC+S+DLD+L+RQE L KN+NK + K+
Sbjct: 471 MKEALSGKGEEGSSPPESSLQDVVSRYSYMDLWPCTSNDLDHLARQELLVKNLNKKAGKT 530

Query: 481 VLPSGPGFLGNSIVLVLLKHFGHICFCWVSSLLFGSDTGSAGLHSIPSTKVVYPDTSQMV 540
            LP  P  +G+                 V+S                S+KVVYPDTSQMV
Sbjct: 531 NLPHVPAAIGS-----------------VAS----------------SSKVVYPDTSQMV 590

Query: 541 IYDPSQKLGTYETPEFYPATAGLPANPT-TLPNSV-SVASVGPTNVFDEILKATPAALIA 600
           + DP++K       EF  +   + A+ + T P++V + A+ G  + FDEI K TP AL+A
Sbjct: 591 VQDPTKK------SEFASSANPVAASASNTFPSTVTATATHGSASTFDEIPKTTPPALVA 650

Query: 601 FLANLPAVDGPTPDVDVVLSVCLESDIPTVPSIKSGATPAQVSAGPVATTTTSDLSGSSK 660
           FLANLP VDGPTP+VDVVLS+CL+SD PT      G T  Q  A      + +D SG ++
Sbjct: 651 FLANLPIVDGPTPNVDVVLSICLQSDFPT------GQTVKQSFAAKGNPPSQNDPSGPTR 710

Query: 661 SHAFSNSSLKHTRDRQSGKRKDYDRQDDDESTTVQSQPLPRDFFRIRQIQKARG-ATSSQ 720
                  S +  RDR++ KRKD DRQ++D++ TVQSQPLP D FR+RQ++KARG ATSSQ
Sbjct: 711 -----GVSQRLPRDRRATKRKDSDRQEEDDTATVQSQPLPTDVFRLRQMRKARGIATSSQ 734

The following BLAST results are available for this feature:

BLAST of MS017042 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154466.1	0.0e+00	88.92	cleavage stimulation factor subunit 77 isoform X1 [Momordica charantia]	[more]
XP_022154467.1	0.0e+00	88.24	cleavage stimulation factor subunit 77 isoform X2 [Momordica charantia]	[more]
XP_008442046.1	0.0e+00	83.08	PREDICTED: cleavage stimulation factor subunit 77 isoform X1 [Cucumis melo]	[more]
XP_022925033.1	0.0e+00	82.81	cleavage stimulation factor subunit 77 [Cucurbita moschata] >XP_022925034.1 clea...	[more]
XP_038881157.1	0.0e+00	83.49	cleavage stimulation factor subunit 77 [Benincasa hispida]	[more]

BLAST of MS017042 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GUP1	1.6e-238	60.32	Cleavage stimulation factor subunit 77 OS=Arabidopsis thaliana OX=3702 GN=CSTF77...	[more]
Q12996	5.7e-82	37.03	Cleavage stimulation factor subunit 3 OS=Homo sapiens OX=9606 GN=CSTF3 PE=1 SV=1	[more]
Q5RDW9	5.7e-82	37.03	Cleavage stimulation factor subunit 3 OS=Pongo abelii OX=9601 GN=CSTF3 PE=2 SV=1	[more]
Q99LI7	7.4e-82	37.03	Cleavage stimulation factor subunit 3 OS=Mus musculus OX=10090 GN=Cstf3 PE=1 SV=...	[more]
P25991	5.7e-66	27.32	Protein suppressor of forked OS=Drosophila melanogaster OX=7227 GN=su(f) PE=1 SV...	[more]

BLAST of MS017042 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DNS9	0.0e+00	88.92	cleavage stimulation factor subunit 77 isoform X1 OS=Momordica charantia OX=3673...	[more]
A0A6J1DLS0	0.0e+00	88.24	cleavage stimulation factor subunit 77 isoform X2 OS=Momordica charantia OX=3673...	[more]
A0A1S3B5G2	0.0e+00	83.08	cleavage stimulation factor subunit 77 isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1EAY7	0.0e+00	82.81	cleavage stimulation factor subunit 77 OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A0A0KZK4	0.0e+00	82.81	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G594420 ...	[more]

BLAST of MS017042 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17760.1	1.2e-239	60.32	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003107	HAT (Half-A-TPR) repeat	SMART	SM00386	hat_new_1	coord: 4..35 e-value: 0.014 score: 24.6 coord: 190..222 e-value: 370.0 score: 3.9 coord: 224..258 e-value: 20.0 score: 13.2 coord: 357..391 e-value: 5.1E-4 score: 29.4 coord: 43..78 e-value: 2.2 score: 17.3 coord: 89..122 e-value: 0.11 score: 21.6 coord: 323..355 e-value: 15.0 score: 14.2
None	No IPR available	GENE3D	1.25.40.1040		coord: 2..447 e-value: 6.9E-131 score: 439.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 693..720
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 612..720
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 613..648
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 649..673
None	No IPR available	PANTHER	PTHR19980	RNA CLEAVAGE STIMULATION FACTOR	coord: 3..694
IPR008847	Suppressor of forked	PFAM	PF05843	Suf	coord: 275..610 e-value: 2.0E-70 score: 238.1
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 210..243 score: 9.5879
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 4..451

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS017042.1	MS017042.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
biological_process	GO:0006396	RNA processing
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding