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MS017020 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATTTTGCTTATGAGGCCTGTTGGTTTTCAGCCAAAAATTTTTAATGGAGTTCGACTTCGAAATGTCTCTTTTGTTGAAAATACGGCGTCATTGATTGTCAAAGCTACGTCTGAGATTGATGGTACGGGAGAGACTGACAGTAATGAACCGCAGCCCCCTGCAGAAGCTAAAAAAGAGGATGTTCCAGTTGACAAACTTCCCTTAGAATCAAAGCTCCAGGAGAGACTGGAGCAGAAGACGAGGATGAAGTTAGCAAAAAAGATTAGGCTGCGGAGGAAGCGGCTTGTTCGGAAGCGCCATTTGAGGAAGAAGGGACGATGGCCTCCTTCAAAGATGAAGAAGTTGAAGAATGTT ATTTTGCTTATGAGGCCTGTTGGTTTTCAGCCAAAAATTTTTAATGGAGTTCGACTTCGAAATGTCTCTTTTGTTGAAAATACGGCGTCATTGATTGTCAAAGCTACGTCTGAGATTGATGGTACGGGAGAGACTGACAGTAATGAACCGCAGCCCCCTGCAGAAGCTAAAAAAGAGGATGTTCCAGTTGACAAACTTCCCTTAGAATCAAAGCTCCAGGAGAGACTGGAGCAGAAGACGAGGATGAAGTTAGCAAAAAAGATTAGGCTGCGGAGGAAGCGGCTTGTTCGGAAGCGCCATTTGAGGAAGAAGGGACGATGGCCTCCTTCAAAGATGAAGAAGTTGAAGAATGTT ATTTTGCTTATGAGGCCTGTTGGTTTTCAGCCAAAAATTTTTAATGGAGTTCGACTTCGAAATGTCTCTTTTGTTGAAAATACGGCGTCATTGATTGTCAAAGCTACGTCTGAGATTGATGGTACGGGAGAGACTGACAGTAATGAACCGCAGCCCCCTGCAGAAGCTAAAAAAGAGGATGTTCCAGTTGACAAACTTCCCTTAGAATCAAAGCTCCAGGAGAGACTGGAGCAGAAGACGAGGATGAAGTTAGCAAAAAAGATTAGGCTGCGGAGGAAGCGGCTTGTTCGGAAGCGCCATTTGAGGAAGAAGGGACGATGGCCTCCTTCAAAGATGAAGAAGTTGAAGAATGTT ILLMRPVGFQPKIFNGVRLRNVSFVENTASLIVKATSEIDGTGETDSNEPQPPAEAKKEDVPVDKLPLESKLQERLEQKTRMKLAKKIRLRRKRLVRKRHLRKKGRWPPSKMKKLKNV Homology
BLAST of MS017020 vs. NCBI nr
Match: XP_022154476.1 (50S ribosomal protein 5, chloroplastic [Momordica charantia]) HSP 1 Score: 216.1 bits (549), Expect = 1.6e-52 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of MS017020 vs. NCBI nr
Match: XP_022949869.1 (50S ribosomal protein 5 alpha, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 193.4 bits (490), Expect = 1.1e-45 Identity = 106/118 (89.83%), Postives = 109/118 (92.37%), Query Frame = 0
BLAST of MS017020 vs. NCBI nr
Match: XP_023543496.1 (50S ribosomal protein 5 alpha, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 191.4 bits (485), Expect = 4.3e-45 Identity = 105/118 (88.98%), Postives = 108/118 (91.53%), Query Frame = 0
BLAST of MS017020 vs. NCBI nr
Match: XP_022967912.1 (50S ribosomal protein 5 alpha, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 191.0 bits (484), Expect = 5.7e-45 Identity = 105/116 (90.52%), Postives = 107/116 (92.24%), Query Frame = 0
BLAST of MS017020 vs. NCBI nr
Match: KAG7013851.1 (50S ribosomal protein 5, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 189.5 bits (480), Expect = 1.6e-44 Identity = 105/118 (88.98%), Postives = 108/118 (91.53%), Query Frame = 0
BLAST of MS017020 vs. ExPASy Swiss-Prot
Match: Q9LER7 (50S ribosomal protein 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSRP5 PE=1 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.7e-15 Identity = 63/122 (51.64%), Postives = 76/122 (62.30%), Query Frame = 0
BLAST of MS017020 vs. ExPASy Swiss-Prot
Match: P11891 (50S ribosomal protein 5, chloroplastic OS=Pisum sativum OX=3888 GN=PSRP5 PE=2 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 4.1e-14 Identity = 49/67 (73.13%), Postives = 57/67 (85.07%), Query Frame = 0
BLAST of MS017020 vs. ExPASy Swiss-Prot
Match: P27684 (50S ribosomal protein 5 alpha, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSRP5 PE=1 SV=2) HSP 1 Score: 77.4 bits (189), Expect = 1.2e-13 Identity = 46/80 (57.50%), Postives = 59/80 (73.75%), Query Frame = 0
BLAST of MS017020 vs. ExPASy TrEMBL
Match: A0A6J1DNT9 (50S ribosomal protein 5, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111021747 PE=4 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 8.0e-53 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of MS017020 vs. ExPASy TrEMBL
Match: A0A6J1GE62 (50S ribosomal protein 5 alpha, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111453134 PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 5.5e-46 Identity = 106/118 (89.83%), Postives = 109/118 (92.37%), Query Frame = 0
BLAST of MS017020 vs. ExPASy TrEMBL
Match: A0A6J1HS41 (50S ribosomal protein 5 alpha, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111467286 PE=4 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 2.7e-45 Identity = 105/116 (90.52%), Postives = 107/116 (92.24%), Query Frame = 0
BLAST of MS017020 vs. ExPASy TrEMBL
Match: A0A0A0L3F4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G419580 PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 1.8e-44 Identity = 103/118 (87.29%), Postives = 110/118 (93.22%), Query Frame = 0
BLAST of MS017020 vs. ExPASy TrEMBL
Match: A0A5D3CEM6 (50S ribosomal protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G00820 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 8.8e-44 Identity = 102/118 (86.44%), Postives = 108/118 (91.53%), Query Frame = 0
BLAST of MS017020 vs. TAIR 10
Match: AT3G56910.1 (plastid-specific 50S ribosomal protein 5 ) HSP 1 Score: 83.6 bits (205), Expect = 1.2e-16 Identity = 63/122 (51.64%), Postives = 76/122 (62.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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