MS017002 (gene) Bitter gourd (TR) v1

Overview


Name	MS017002
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	HTH myb-type domain-containing protein
Location	scaffold197: 564291 .. 565190 (+)
RNA-Seq Expression	MS017002
Synteny	MS017002

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGAAGAACACTCGAATTGGTTCTCGAGGTGGGAAGAGGAGCTTCCTTCGCCGGATGAATTGATGCCGCTTTCTCAAACCCTAATTACCCCCGATCTAGCTCTGGCTTTTGATATTCAAAATCCCACCAATAGCAGCCCGCCGCTGCCCTGCCCGTCCCCTCCTCTTTCGAATCCCCTGCCCGGCTCCGGCAACGGAATTGCGCCGCCCAACTCGGCGGATTTCGGCGATTCCGCCGATTTGGGCTCCGGCGGCGCCAGCGACGAGCCGGCCCGGACCCTCAAGCGGCCGCGTCTCGTCTGGACGCCGCAGCTCCACAAGCGATTCGTGGACGCCGTGGCGCATTTGGGGATCAAAAATGCCGTCCCCAAGACCATAATGCAGCTAATGAGTGTCGATGGCTTGACCAGAGAGAACGTAGCTTCCCATTTGCAGAAGTACCGCCTCTACCTCAAGCGGATGCAGGGCTTGTCCGCCGGCGGCGGCGGCGGCGGTGGCTTGGTTGCTTCCTCCGATCCCGCCACCGACCACTTGTTCGCTAGCTCCCCGGTCCCGCCCCATTTGCTGCACTCTGCCCGCGCCAGTTCGGACCATTTCTTGCCCTTTGTTCCCATGGCCACTCTGCAGCAGCACCACCATCACCAGCAGCAGATGGCTGCTGCTGCTGCGGTTGTCGCCCATCCCCAGCTGCAGCCACCATATCACCGGCAGGTCGGGCATTTCGGGTCGCCTCCGAACGGCCAGTTTGAGCATCCATTTTTAGCTAGACAGTCACAGCCCATCCATAGAATGGGGGCACCAGTGCATAATTCAGTACCAAATTACATTGAGGATTTGGAATCAGCCAATGCAACTGGAGGAAGAAAAGTCCTCACCTTATTTCCCACTGGGGATGAT

mRNA sequence

ATGAGGGAAGAACACTCGAATTGGTTCTCGAGGTGGGAAGAGGAGCTTCCTTCGCCGGATGAATTGATGCCGCTTTCTCAAACCCTAATTACCCCCGATCTAGCTCTGGCTTTTGATATTCAAAATCCCACCAATAGCAGCCCGCCGCTGCCCTGCCCGTCCCCTCCTCTTTCGAATCCCCTGCCCGGCTCCGGCAACGGAATTGCGCCGCCCAACTCGGCGGATTTCGGCGATTCCGCCGATTTGGGCTCCGGCGGCGCCAGCGACGAGCCGGCCCGGACCCTCAAGCGGCCGCGTCTCGTCTGGACGCCGCAGCTCCACAAGCGATTCGTGGACGCCGTGGCGCATTTGGGGATCAAAAATGCCGTCCCCAAGACCATAATGCAGCTAATGAGTGTCGATGGCTTGACCAGAGAGAACGTAGCTTCCCATTTGCAGAAGTACCGCCTCTACCTCAAGCGGATGCAGGGCTTGTCCGCCGGCGGCGGCGGCGGCGGTGGCTTGGTTGCTTCCTCCGATCCCGCCACCGACCACTTGTTCGCTAGCTCCCCGGTCCCGCCCCATTTGCTGCACTCTGCCCGCGCCAGTTCGGACCATTTCTTGCCCTTTGTTCCCATGGCCACTCTGCAGCAGCACCACCATCACCAGCAGCAGATGGCTGCTGCTGCTGCGGTTGTCGCCCATCCCCAGCTGCAGCCACCATATCACCGGCAGGTCGGGCATTTCGGGTCGCCTCCGAACGGCCAGTTTGAGCATCCATTTTTAGCTAGACAGTCACAGCCCATCCATAGAATGGGGGCACCAGTGCATAATTCAGTACCAAATTACATTGAGGATTTGGAATCAGCCAATGCAACTGGAGGAAGAAAAGTCCTCACCTTATTTCCCACTGGGGATGAT

Coding sequence (CDS)

ATGAGGGAAGAACACTCGAATTGGTTCTCGAGGTGGGAAGAGGAGCTTCCTTCGCCGGATGAATTGATGCCGCTTTCTCAAACCCTAATTACCCCCGATCTAGCTCTGGCTTTTGATATTCAAAATCCCACCAATAGCAGCCCGCCGCTGCCCTGCCCGTCCCCTCCTCTTTCGAATCCCCTGCCCGGCTCCGGCAACGGAATTGCGCCGCCCAACTCGGCGGATTTCGGCGATTCCGCCGATTTGGGCTCCGGCGGCGCCAGCGACGAGCCGGCCCGGACCCTCAAGCGGCCGCGTCTCGTCTGGACGCCGCAGCTCCACAAGCGATTCGTGGACGCCGTGGCGCATTTGGGGATCAAAAATGCCGTCCCCAAGACCATAATGCAGCTAATGAGTGTCGATGGCTTGACCAGAGAGAACGTAGCTTCCCATTTGCAGAAGTACCGCCTCTACCTCAAGCGGATGCAGGGCTTGTCCGCCGGCGGCGGCGGCGGCGGTGGCTTGGTTGCTTCCTCCGATCCCGCCACCGACCACTTGTTCGCTAGCTCCCCGGTCCCGCCCCATTTGCTGCACTCTGCCCGCGCCAGTTCGGACCATTTCTTGCCCTTTGTTCCCATGGCCACTCTGCAGCAGCACCACCATCACCAGCAGCAGATGGCTGCTGCTGCTGCGGTTGTCGCCCATCCCCAGCTGCAGCCACCATATCACCGGCAGGTCGGGCATTTCGGGTCGCCTCCGAACGGCCAGTTTGAGCATCCATTTTTAGCTAGACAGTCACAGCCCATCCATAGAATGGGGGCACCAGTGCATAATTCAGTACCAAATTACATTGAGGATTTGGAATCAGCCAATGCAACTGGAGGAAGAAAAGTCCTCACCTTATTTCCCACTGGGGATGAT

Protein sequence

MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNSSPPLPCPSPPLSNPLPGSGNGIAPPNSADFGDSADLGSGGASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAGGGGGGGLVASSDPATDHLFASSPVPPHLLHSARASSDHFLPFVPMATLQQHHHHQQQMAAAAAVVAHPQLQPPYHRQVGHFGSPPNGQFEHPFLARQSQPIHRMGAPVHNSVPNYIEDLESANATGGRKVLTLFPTGDD

Homology

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BLAST of MS017002 vs. NCBI nr
Match: XP_038882973.1 (transcription factor MYBC1-like [Benincasa hispida])

HSP 1 Score: 583.6 bits (1503), Expect = 1.0e-162
Identity = 289/301 (96.01%), Postives = 292/301 (97.01%), Query Frame = 0


Query: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNSSPPLPCPSPPLSNP 60
           MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNP+NSSPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIAPPNSADFGDSADLGSGGASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGIAPPNSADFGDSADLGSG A DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIAPPNSADFGDSADLGSGAAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAGGGGGGG-LVASSDPATDHL 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS GGGGGGG LV SSDPATDHL
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGGALVGSSDPATDHL 180

Query: 181 FASSPVPPHLLHSARASSDHFLPFVPMATLQQHHHHQQQMAAAAAVVAHPQLQPPYHRQV 240
           FASSPVPPHLLHSAR SSDHFLPFVPMATLQQHHHHQQQMAAAAAV +H QLQPPYHRQV
Sbjct: 181 FASSPVPPHLLHSARTSSDHFLPFVPMATLQQHHHHQQQMAAAAAVASHSQLQPPYHRQV 240

Query: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGAPVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300
           GHFGSPPNGQFEHPFLARQSQPIHRMGA VHNSVPNYIEDLESANA+GGRKVLTLFPTGD
Sbjct: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGASVHNSVPNYIEDLESANASGGRKVLTLFPTGD 300

[Close]

BLAST of MS017002 vs. NCBI nr
Match: XP_004144322.1 (transcription factor MYBC1 [Cucumis sativus] >KGN54684.1 hypothetical protein Csa_012282 [Cucumis sativus])

HSP 1 Score: 581.6 bits (1498), Expect = 3.8e-162
Identity = 287/301 (95.35%), Postives = 290/301 (96.35%), Query Frame = 0


Query: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNSSPPLPCPSPPLSNP 60
           MREEHSNWFSRWE+ELPSPDELMPLSQTLITPDLALAFDIQNP+NSSPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIAPPNSADFGDSADLGSGGASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGI PPNSADFGDSADLGSG ASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAGGGGGG-GLVASSDPATDHL 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS GGGGGG  LV SSDPATDHL
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAALVGSSDPATDHL 180

Query: 181 FASSPVPPHLLHSARASSDHFLPFVPMATLQQHHHHQQQMAAAAAVVAHPQLQPPYHRQV 240
           FASSPVPPHLLHSAR SSDHFLP+VPMATLQQHHHHQQQMAAAAAV  H QLQPPYHRQV
Sbjct: 181 FASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQV 240

Query: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGAPVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300
           GHFGSPPNGQFEHPFLARQSQPIHRMG PVHNSVPNYIEDLESANATGGRKVLTLFPTGD
Sbjct: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300

[Close]

BLAST of MS017002 vs. NCBI nr
Match: XP_008455739.1 (PREDICTED: transcription factor PCL1-like [Cucumis melo] >KAA0025859.1 transcription factor PCL1-like [Cucumis melo var. makuwa] >TYK22606.1 transcription factor PCL1-like [Cucumis melo var. makuwa])

HSP 1 Score: 578.6 bits (1490), Expect = 3.2e-161
Identity = 287/301 (95.35%), Postives = 288/301 (95.68%), Query Frame = 0


Query: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNSSPPLPCPSPPLSNP 60
           MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNP+NSSPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIAPPNSADFGDSADLGSGGASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGI PPNSADFGDSADLGSG ASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAGG-GGGGGLVASSDPATDHL 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS GG GGG  LV SSDPATDHL
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGAGGGAALVGSSDPATDHL 180

Query: 181 FASSPVPPHLLHSARASSDHFLPFVPMATLQQHHHHQQQMAAAAAVVAHPQLQPPYHRQV 240
           FASSPVPPHLLHSAR SSDHFLPFVPMATLQQHHHHQQQMAAAAAV  H QLQPPYHRQV
Sbjct: 181 FASSPVPPHLLHSARTSSDHFLPFVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQV 240

Query: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGAPVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300
           GHFGSPPNGQFEHPFLARQSQPIHRMG  VHNSVPNYIEDLESANATGGRKVLTLFPTGD
Sbjct: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGTSVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300

[Close]

BLAST of MS017002 vs. NCBI nr
Match: XP_023543478.1 (transcription factor MYBC1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 570.5 bits (1469), Expect = 8.7e-159
Identity = 285/304 (93.75%), Postives = 292/304 (96.05%), Query Frame = 0


Query: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNSSPPLPCPSPPLSNP 60
           MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQN +N+SPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNSSNTSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIAPPNSADFGDSADLGSGGASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGIAPPNSADFGDSADLGSG ASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIAPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSA--GGGGGGGLVASSDPATDH 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS+  GGGGGGGLVASSDP TDH
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGGGGGGLVASSDP-TDH 180

Query: 181 LFASSPVPPHLLHSARASSDHFLPFVPMATLQQHHHHQQQM--AAAAAVVAHPQLQPPYH 240
           LFASSPVPPHLLHSAR++SDHFLPFVPMATLQQHHHHQQ M  AAAAAV  HPQLQP YH
Sbjct: 181 LFASSPVPPHLLHSARSTSDHFLPFVPMATLQQHHHHQQHMAAAAAAAVAGHPQLQPSYH 240

Query: 241 RQVGHFGSPPNGQFEHPFLARQSQPIHRMGAPVHNSVPNYIEDLESANATGGRKVLTLFP 300
           RQVGHFGSPPNGQFEHPFLARQSQP+HRMGAPVHNS+PNYIEDLESANA GGRKVLTLFP
Sbjct: 241 RQVGHFGSPPNGQFEHPFLARQSQPVHRMGAPVHNSIPNYIEDLESANANGGRKVLTLFP 300

[Close]

BLAST of MS017002 vs. NCBI nr
Match: KAG6604300.1 (Transcription factor MYBC1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 568.9 bits (1465), Expect = 2.5e-158
Identity = 284/305 (93.11%), Postives = 292/305 (95.74%), Query Frame = 0


Query: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNSSPPLPCPSPPLSNP 60
           MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQN +N+SPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNSSNTSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIAPPNSADFGDSADLGSGGASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGIAPPNSADFGDSADLGSG ASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIAPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSA---GGGGGGGLVASSDPATD 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS+   GGGGGGGLVAS+DP TD
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGGGGGGGLVASTDP-TD 180

Query: 181 HLFASSPVPPHLLHSARASSDHFLPFVPMATLQQHHHHQQQM--AAAAAVVAHPQLQPPY 240
           HLFASSPVPPHLLHSAR++SDHFLPFVPMATLQQHHHHQQ M  AAAAAV  HPQLQP Y
Sbjct: 181 HLFASSPVPPHLLHSARSTSDHFLPFVPMATLQQHHHHQQHMAAAAAAAVAGHPQLQPSY 240

Query: 241 HRQVGHFGSPPNGQFEHPFLARQSQPIHRMGAPVHNSVPNYIEDLESANATGGRKVLTLF 300
           HRQVGHFGSPPNGQFEHPFLARQSQP+HRMGAPVHNS+PNYIEDLESANA GGRKVLTLF
Sbjct: 241 HRQVGHFGSPPNGQFEHPFLARQSQPVHRMGAPVHNSIPNYIEDLESANANGGRKVLTLF 300

[Close]

BLAST of MS017002 vs. ExPASy Swiss-Prot
Match: O22210 (Transcription factor MYBC1 OS=Arabidopsis thaliana OX=3702 GN=MYBC1 PE=1 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 7.4e-60
Identity = 139/237 (58.65%), Postives = 161/237 (67.93%), Query Frame = 0


Query: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNP----------------- 60
           MRE++ NWF RWEEELPSP+EL+P+SQTLITP LALAF I +P                 
Sbjct: 1   MREDNPNWFLRWEEELPSPEELIPISQTLITPHLALAFQIGSPNHHLGSKRTTAIYHQKL 60

Query: 61  -TNSSPPLPCPSPPLSNPLPGSGNGIAPPNSADF--GDSADLGSGGASDEPARTLKRPRL 120
            ++++P  P P+PP   P+           ++DF  GDS DLGSG    EPARTLKRPRL
Sbjct: 61  QSSTTPTTPTPTPP---PM---------MMNSDFGGGDSTDLGSGSIGGEPARTLKRPRL 120

Query: 121 VWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSA 180
           VWTPQLHKRFVDAV HLGIKNAVPKTIMQLMSV+GLTRENVASHLQKYRLYL+RMQG   
Sbjct: 121 VWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYRLYLRRMQG-GN 180

Query: 181 GGGGGGGLVASSDPATDHLFASSPVPPHLLHSARASSDHFLPFVPMATLQQHHHHQQ 218
           G G  GG V  SD ATD LFASSPVP H L     S D+ +P +  + + +H   QQ
Sbjct: 181 GNGITGGHVIVSDSATDRLFASSPVPAHFL-----SPDYLMPPLEHSYMGKHVITQQ 219

[Close]

BLAST of MS017002 vs. ExPASy Swiss-Prot
Match: Q9SNB4 (Transcription factor LUX OS=Arabidopsis thaliana OX=3702 GN=LUX PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.3e-37
Identity = 122/306 (39.87%), Postives = 151/306 (49.35%), Query Frame = 0


Query: 10  SRWEEELPSPDELMPLSQTLITPDLALAFDI----------------------------- 69
           S WE  LPS ++L  LS +LI P+LA+AF I                             
Sbjct: 20  SEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSSLRGGSSGP 79

Query: 70  ------------QNPTNSSPPLPCPSPPLSNPLPGSGNGIAPPNSADFGDSADLGSGGAS 129
                           +SSP         SN     G G+ P    D   +A+ G  G  
Sbjct: 80  NTSSSNNNVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDP----DSAMAAEEGDSGTE 139

Query: 130 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 189
           D   +TLKRPRLVWTPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQKY
Sbjct: 140 DLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKY 199

Query: 190 RLYLKRMQGLSAGGGGGGGLVASSDPATDHLFASSPVPPHL---LHSARASSDHFLPFVP 249
           RLYLKRMQGL+  G            A+D LF+S+PVPP     +     SS +    +P
Sbjct: 200 RLYLKRMQGLTNEG----------PSASDKLFSSTPVPPQSFQDIGGGGGSSGNVGVPIP 259

Query: 250 MATLQQHHHHQQQMAAAAAVVAHPQLQ---------PPYHR-QVGHFGSPPNGQFE-HPF 261
            A      +  QQM        H  +Q          PYH+    H G+  NG FE +P+
Sbjct: 260 GA------YGTQQMMQMPVYAHHMGMQGYHHQNHNHDPYHQNHRHHHGAGGNGAFESNPY 305

[Close]

BLAST of MS017002 vs. ExPASy Swiss-Prot
Match: Q94DH3 (Transcription factor PCL1 OS=Oryza sativa subsp. japonica OX=39947 GN=PCL1 PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.6e-36
Identity = 109/233 (46.78%), Postives = 131/233 (56.22%), Query Frame = 0


Query: 12  WEEELPSPDELMPLSQTLITPDLALAF-----------DIQNPTNSS-PPLPCPSPPLSN 71
           WE  LP  DEL PLSQ L+   LA AF           D+   + ++   L   S   S+
Sbjct: 22  WETGLPGADELTPLSQPLVPAGLAAAFRIPPEPGRTLLDVHRASAATVSRLRRASSSSSS 81

Query: 72  PLP-----GSGNGIAPPNSADFGDSADLGSGGASDEPARTLKRPRLVWTPQLHKRFVDAV 131
             P     G+G G    + A+ G  AD G+G  ++  +   KR RLVWTPQLHKRFV+ V
Sbjct: 82  SFPAFASKGAGTG---ADEAESGGGADGGNGNTNNSSS---KRARLVWTPQLHKRFVEVV 141

Query: 132 AHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAGGGGGGGLVASSDP 191
           AHLG+KNAVPKTIMQLM+V+GLTRENVASHLQKYRLY+KRMQGLS  G            
Sbjct: 142 AHLGMKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYVKRMQGLSNEG----------PS 201

Query: 192 ATDHLFASSPVPPHLLHSARASSDHFLPFVPMATLQQHHHHQQQMAAAAAVVA 228
            +DH+FAS+PVP   LH    S  H  P          HHH    AA AA V+
Sbjct: 202 PSDHIFASTPVPHASLHDQVPSPYHPHP----------HHHSYNNAAYAATVS 228

[Close]

BLAST of MS017002 vs. ExPASy Swiss-Prot
Match: Q9LTH4 (Transcription factor BOA OS=Arabidopsis thaliana OX=3702 GN=BOA PE=2 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 8.2e-35
Identity = 107/267 (40.07%), Postives = 140/267 (52.43%), Query Frame = 0


Query: 12  WEEELPSPDELMPLSQTLITPDLALAF----------------------DIQNPTNSSPP 71
           WE  LP+ D+L PLSQ L+   LALAF                       +++ TN+S  
Sbjct: 29  WEIGLPNGDDLTPLSQYLVPSILALAFSMIPERSRTIHDVNRASQITLSSLRSSTNASSV 88

Query: 72  LPCPSPPLSNPLPGSGNGIAPPNSADFGD-------SADLGSGGASDEPARTLKRPRLVW 131
           +      + + +PGS         +D G+       +A+ G  G  D   +T KRPRLVW
Sbjct: 89  MEEVVDRVESSVPGSDP--KKQKKSDGGEAAAVEDSTAEEGDSGPEDASGKTSKRPRLVW 148

Query: 132 TPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAGG 191
           TPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQKYRLYLKR+QGL+   
Sbjct: 149 TPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRIQGLT--- 208

Query: 192 GGGGGLVASSDP--ATDHLFASSPVPPHLLHSARASSDHFLPFVPMATLQQHHHHQQQMA 248
                     DP  ++D LF+S+PVPP        S+      VP+ ++     +  QM 
Sbjct: 209 -------TEEDPYSSSDQLFSSTPVPPQSFQDGGGSNGKLGVPVPVPSMVPIPGYGNQMG 268

[Close]

BLAST of MS017002 vs. ExPASy Swiss-Prot
Match: Q940D0 (Two-component response regulator ARR1 OS=Arabidopsis thaliana OX=3702 GN=ARR1 PE=1 SV=2)

HSP 1 Score: 99.8 bits (247), Expect = 5.7e-20
Identity = 47/79 (59.49%), Postives = 62/79 (78.48%), Query Frame = 0


Query: 85  GGASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH 144
           G   DE A  LK+PR+VW+ +LH++FV AV  LG++ AVPK I++LM+V GLTRENVASH
Sbjct: 225 GDDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKKILELMNVPGLTRENVASH 284

Query: 145 LQKYRLYLKRMQGLSAGGG 164
           LQKYR+YL+R+ G+S   G
Sbjct: 285 LQKYRIYLRRLGGVSQHQG 303

[Close]

BLAST of MS017002 vs. ExPASy TrEMBL
Match: A0A0A0L0V3 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G425730 PE=4 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 1.8e-162
Identity = 287/301 (95.35%), Postives = 290/301 (96.35%), Query Frame = 0


Query: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNSSPPLPCPSPPLSNP 60
           MREEHSNWFSRWE+ELPSPDELMPLSQTLITPDLALAFDIQNP+NSSPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEDELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIAPPNSADFGDSADLGSGGASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGI PPNSADFGDSADLGSG ASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAGGGGGG-GLVASSDPATDHL 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS GGGGGG  LV SSDPATDHL
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAALVGSSDPATDHL 180

Query: 181 FASSPVPPHLLHSARASSDHFLPFVPMATLQQHHHHQQQMAAAAAVVAHPQLQPPYHRQV 240
           FASSPVPPHLLHSAR SSDHFLP+VPMATLQQHHHHQQQMAAAAAV  H QLQPPYHRQV
Sbjct: 181 FASSPVPPHLLHSARTSSDHFLPYVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQV 240

Query: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGAPVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300
           GHFGSPPNGQFEHPFLARQSQPIHRMG PVHNSVPNYIEDLESANATGGRKVLTLFPTGD
Sbjct: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGTPVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300

[Close]

BLAST of MS017002 vs. ExPASy TrEMBL
Match: A0A5A7SKT7 (Transcription factor PCL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00270 PE=4 SV=1)

HSP 1 Score: 578.6 bits (1490), Expect = 1.6e-161
Identity = 287/301 (95.35%), Postives = 288/301 (95.68%), Query Frame = 0


Query: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNSSPPLPCPSPPLSNP 60
           MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNP+NSSPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIAPPNSADFGDSADLGSGGASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGI PPNSADFGDSADLGSG ASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAGG-GGGGGLVASSDPATDHL 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS GG GGG  LV SSDPATDHL
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGAGGGAALVGSSDPATDHL 180

Query: 181 FASSPVPPHLLHSARASSDHFLPFVPMATLQQHHHHQQQMAAAAAVVAHPQLQPPYHRQV 240
           FASSPVPPHLLHSAR SSDHFLPFVPMATLQQHHHHQQQMAAAAAV  H QLQPPYHRQV
Sbjct: 181 FASSPVPPHLLHSARTSSDHFLPFVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQV 240

Query: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGAPVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300
           GHFGSPPNGQFEHPFLARQSQPIHRMG  VHNSVPNYIEDLESANATGGRKVLTLFPTGD
Sbjct: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGTSVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300

[Close]

BLAST of MS017002 vs. ExPASy TrEMBL
Match: A0A1S3C2U8 (transcription factor PCL1-like OS=Cucumis melo OX=3656 GN=LOC103495840 PE=4 SV=1)

HSP 1 Score: 578.6 bits (1490), Expect = 1.6e-161
Identity = 287/301 (95.35%), Postives = 288/301 (95.68%), Query Frame = 0


Query: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNSSPPLPCPSPPLSNP 60
           MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNP+NSSPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPSNSSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIAPPNSADFGDSADLGSGGASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGI PPNSADFGDSADLGSG ASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIVPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAGG-GGGGGLVASSDPATDHL 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS GG GGG  LV SSDPATDHL
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGAGGGAALVGSSDPATDHL 180

Query: 181 FASSPVPPHLLHSARASSDHFLPFVPMATLQQHHHHQQQMAAAAAVVAHPQLQPPYHRQV 240
           FASSPVPPHLLHSAR SSDHFLPFVPMATLQQHHHHQQQMAAAAAV  H QLQPPYHRQV
Sbjct: 181 FASSPVPPHLLHSARTSSDHFLPFVPMATLQQHHHHQQQMAAAAAVAGHTQLQPPYHRQV 240

Query: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGAPVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300
           GHFGSPPNGQFEHPFLARQSQPIHRMG  VHNSVPNYIEDLESANATGGRKVLTLFPTGD
Sbjct: 241 GHFGSPPNGQFEHPFLARQSQPIHRMGTSVHNSVPNYIEDLESANATGGRKVLTLFPTGD 300

[Close]

BLAST of MS017002 vs. ExPASy TrEMBL
Match: A0A6J1HT87 (transcription factor MYBC1-like OS=Cucurbita maxima OX=3661 GN=LOC111467241 PE=4 SV=1)

HSP 1 Score: 568.2 bits (1463), Expect = 2.1e-158
Identity = 284/305 (93.11%), Postives = 292/305 (95.74%), Query Frame = 0


Query: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNSSPPLPCPSPPLSNP 60
           MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQN +N+SPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNSSNTSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIAPPNSADFGDSADLGSGGASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGIAPPNSADFGDSADLGSG ASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIAPPNSADFGDSADLGSGAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSA--GGGGGGGLVASSDPATDH 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS+  GGGGGGGLVASSDP TDH
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGGGGGGLVASSDP-TDH 180

Query: 181 LFASSPVPPHLLHSARASSDHFLPFVPMATLQQHHHHQQQM---AAAAAVVAHPQLQPPY 240
           LFASSPVPPHLLHSAR++SDHFLPFVPMATLQQHHHHQQ M   AAAAAV  HPQLQP Y
Sbjct: 181 LFASSPVPPHLLHSARSTSDHFLPFVPMATLQQHHHHQQHMAAAAAAAAVAGHPQLQPSY 240

Query: 241 HRQVGHFGSPPNGQFEHPFLARQSQPIHRMGAPVHNSVPNYIEDLESANATGGRKVLTLF 300
           HRQVGHFGSPPNGQFEHPFLARQSQP+HRMGAPVH+S+PNYIEDLESANA GGRKVLTLF
Sbjct: 241 HRQVGHFGSPPNGQFEHPFLARQSQPVHRMGAPVHSSIPNYIEDLESANANGGRKVLTLF 300

[Close]

BLAST of MS017002 vs. ExPASy TrEMBL
Match: A0A6J1F331 (transcription factor MYBC1-like OS=Cucurbita moschata OX=3662 GN=LOC111439239 PE=4 SV=1)

HSP 1 Score: 566.6 bits (1459), Expect = 6.1e-158
Identity = 284/305 (93.11%), Postives = 291/305 (95.41%), Query Frame = 0


Query: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPTNSSPPLPCPSPPLSNP 60
           MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQN +N+SPPLPCPSPPLSNP
Sbjct: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNSSNTSPPLPCPSPPLSNP 60

Query: 61  LPGSGNGIAPPNSADFGDSADLGSGGASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120
           LPGSGNGIAPPNSADFGDSADLGS  ASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK
Sbjct: 61  LPGSGNGIAPPNSADFGDSADLGSVAASDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIK 120

Query: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSA---GGGGGGGLVASSDPATD 180
           NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS+   GGGGGGGLVASSDP TD
Sbjct: 121 NAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGGGGGGGLVASSDP-TD 180

Query: 181 HLFASSPVPPHLLHSARASSDHFLPFVPMATLQQHHHHQQQM--AAAAAVVAHPQLQPPY 240
           HLFASSPVPPHLLHSAR++SDHFLPFVPMATLQQHHHHQQ M  AAAAAV  HPQLQP Y
Sbjct: 181 HLFASSPVPPHLLHSARSTSDHFLPFVPMATLQQHHHHQQHMAAAAAAAVAGHPQLQPSY 240

Query: 241 HRQVGHFGSPPNGQFEHPFLARQSQPIHRMGAPVHNSVPNYIEDLESANATGGRKVLTLF 300
           HRQVGHFGSPPNGQFEHPFLARQSQP+HRMGAPVHNS+PNYIEDLESANA GGRKVLTLF
Sbjct: 241 HRQVGHFGSPPNGQFEHPFLARQSQPVHRMGAPVHNSIPNYIEDLESANANGGRKVLTLF 300

[Close]

BLAST of MS017002 vs. TAIR 10
Match: AT3G10760.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 357.1 bits (915), Expect = 1.4e-98
Identity = 222/349 (63.61%), Postives = 243/349 (69.63%), Query Frame = 0


Query: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNPT----NSSPP------L 60
           MRE+ S+WF+RWEEELPSP+ELMP+SQ+LI+PDLALAFDI+ P     NS+ P       
Sbjct: 1   MREDDSDWFARWEEELPSPEELMPISQSLISPDLALAFDIRTPNHGNGNSNQPHHHHHHQ 60

Query: 61  PCPSPPLSNPLPGSGNGIAPPNSADF-GDSADLGSGGAS-DEPARTLKRPRLVWTPQLHK 120
             P  P    LP S       +SA+F  DSADLGSGGA+ DEPARTLKRPRLVWTPQLHK
Sbjct: 61  TTPPTPSQLQLPSS----QANSSAEFAADSADLGSGGAAGDEPARTLKRPRLVWTPQLHK 120

Query: 121 RFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAGGGGGGGL 180
           RFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS+GGG G   
Sbjct: 121 RFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGGGAG--- 180

Query: 181 VASSDPATDHLFASSPVPPHLLHSARA-SSDHFLP-FVPMATLQQHHHHQQQM--AAAAA 240
              SDPATD LFASSPVP H LH  R  SSDHF+P FVP+ATLQQ    QQQM  AAAAA
Sbjct: 181 ---SDPATDRLFASSPVPAHFLHPNRVPSSDHFMPSFVPIATLQQ----QQQMAAAAAAA 240

Query: 241 VVAHPQLQPP-YHRQV--GHFGSPPNGQFEHP--------------------------FL 300
             A+P LQPP +HRQ+   HFGSP NG F  P                          FL
Sbjct: 241 AAANPHLQPPQFHRQIAAAHFGSPTNGGFSSPTSNGQFGSPTSNGFGSPTTNGKFDPSFL 300

[Close]

BLAST of MS017002 vs. TAIR 10
Match: AT5G05090.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 288.5 bits (737), Expect = 6.2e-78
Identity = 179/311 (57.56%), Postives = 209/311 (67.20%), Query Frame = 0


Query: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDI--QNPTNSSPPLPCPSPPLS 60
           MREE SNWF++WEEELPSP+EL+PLSQ+LITPDLA+AFD+   N +NS  PLP  +PP  
Sbjct: 1   MREEDSNWFAKWEEELPSPEELIPLSQSLITPDLAIAFDLHRNNNSNSGQPLPQTTPP-- 60

Query: 61  NPLPGSGNGIAPPNSADFGDSADLGSGGASDEPARTLKRPRLVWTPQLHKRFVDAVAHLG 120
                       PNS     SA++      DEPARTLKRPRLVWTPQLHKRFVDAVAHLG
Sbjct: 61  -----------QPNS-----SAEIAGDSTGDEPARTLKRPRLVWTPQLHKRFVDAVAHLG 120

Query: 121 IKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAGGGGGGGLVASSDPATDH 180
           IKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRM+  S GGGGG G        +DH
Sbjct: 121 IKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMK--SGGGGGGSG-------DSDH 180

Query: 181 LFASSPVPPHLLH-SARASSDHFLP-FVPMATLQQHHHHQQQMAAAAAVVAHPQLQPPYH 240
           LFASSPVPPH LH ++R SSD F+P FVP++T QQH             +A P  Q   H
Sbjct: 181 LFASSPVPPHFLHPTSRQSSDLFIPSFVPISTQQQH-------------IAAPPSQ-FLH 240

Query: 241 RQVG--HFGSPPNGQFEHPFLARQ----SQPIHRMGA-PVHNSVPNYIEDLESANATGGR 300
           RQ+   +F SP     +  FLARQ     QP+ +  +  +H+ V NY +DL+S    G +
Sbjct: 241 RQISAVNFTSPTKATDQAMFLARQQSELQQPVFKPSSLHLHSQVANYTQDLKS----GAK 266

[Close]

BLAST of MS017002 vs. TAIR 10
Match: AT2G40970.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 232.3 bits (591), Expect = 5.3e-61
Identity = 139/237 (58.65%), Postives = 161/237 (67.93%), Query Frame = 0


Query: 1   MREEHSNWFSRWEEELPSPDELMPLSQTLITPDLALAFDIQNP----------------- 60
           MRE++ NWF RWEEELPSP+EL+P+SQTLITP LALAF I +P                 
Sbjct: 1   MREDNPNWFLRWEEELPSPEELIPISQTLITPHLALAFQIGSPNHHLGSKRTTAIYHQKL 60

Query: 61  -TNSSPPLPCPSPPLSNPLPGSGNGIAPPNSADF--GDSADLGSGGASDEPARTLKRPRL 120
            ++++P  P P+PP   P+           ++DF  GDS DLGSG    EPARTLKRPRL
Sbjct: 61  QSSTTPTTPTPTPP---PM---------MMNSDFGGGDSTDLGSGSIGGEPARTLKRPRL 120

Query: 121 VWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSA 180
           VWTPQLHKRFVDAV HLGIKNAVPKTIMQLMSV+GLTRENVASHLQKYRLYL+RMQG   
Sbjct: 121 VWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYRLYLRRMQG-GN 180

Query: 181 GGGGGGGLVASSDPATDHLFASSPVPPHLLHSARASSDHFLPFVPMATLQQHHHHQQ 218
           G G  GG V  SD ATD LFASSPVP H L     S D+ +P +  + + +H   QQ
Sbjct: 181 GNGITGGHVIVSDSATDRLFASSPVPAHFL-----SPDYLMPPLEHSYMGKHVITQQ 219

[Close]

BLAST of MS017002 vs. TAIR 10
Match: AT3G46640.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 157.5 bits (397), Expect = 1.6e-38
Identity = 122/306 (39.87%), Postives = 151/306 (49.35%), Query Frame = 0


Query: 10  SRWEEELPSPDELMPLSQTLITPDLALAFDI----------------------------- 69
           S WE  LPS ++L  LS +LI P+LA+AF I                             
Sbjct: 20  SEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSSLRGGSSGP 79

Query: 70  ------------QNPTNSSPPLPCPSPPLSNPLPGSGNGIAPPNSADFGDSADLGSGGAS 129
                           +SSP         SN     G G+ P    D   +A+ G  G  
Sbjct: 80  NTSSSNNNVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDP----DSAMAAEEGDSGTE 139

Query: 130 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 189
           D   +TLKRPRLVWTPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQKY
Sbjct: 140 DLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKY 199

Query: 190 RLYLKRMQGLSAGGGGGGGLVASSDPATDHLFASSPVPPHL---LHSARASSDHFLPFVP 249
           RLYLKRMQGL+  G            A+D LF+S+PVPP     +     SS +    +P
Sbjct: 200 RLYLKRMQGLTNEG----------PSASDKLFSSTPVPPQSFQDIGGGGGSSGNVGVPIP 259

Query: 250 MATLQQHHHHQQQMAAAAAVVAHPQLQ---------PPYHR-QVGHFGSPPNGQFE-HPF 261
            A      +  QQM        H  +Q          PYH+    H G+  NG FE +P+
Sbjct: 260 GA------YGTQQMMQMPVYAHHMGMQGYHHQNHNHDPYHQNHRHHHGAGGNGAFESNPY 305

[Close]

BLAST of MS017002 vs. TAIR 10
Match: AT3G46640.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 157.5 bits (397), Expect = 1.6e-38
Identity = 122/306 (39.87%), Postives = 151/306 (49.35%), Query Frame = 0


Query: 10  SRWEEELPSPDELMPLSQTLITPDLALAFDI----------------------------- 69
           S WE  LPS ++L  LS +LI P+LA+AF I                             
Sbjct: 20  SEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSSLRGGSSGP 79

Query: 70  ------------QNPTNSSPPLPCPSPPLSNPLPGSGNGIAPPNSADFGDSADLGSGGAS 129
                           +SSP         SN     G G+ P    D   +A+ G  G  
Sbjct: 80  NTSSSNNNVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDP----DSAMAAEEGDSGTE 139

Query: 130 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 189
           D   +TLKRPRLVWTPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQKY
Sbjct: 140 DLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKY 199

Query: 190 RLYLKRMQGLSAGGGGGGGLVASSDPATDHLFASSPVPPHL---LHSARASSDHFLPFVP 249
           RLYLKRMQGL+  G            A+D LF+S+PVPP     +     SS +    +P
Sbjct: 200 RLYLKRMQGLTNEG----------PSASDKLFSSTPVPPQSFQDIGGGGGSSGNVGVPIP 259

Query: 250 MATLQQHHHHQQQMAAAAAVVAHPQLQ---------PPYHR-QVGHFGSPPNGQFE-HPF 261
            A      +  QQM        H  +Q          PYH+    H G+  NG FE +P+
Sbjct: 260 GA------YGTQQMMQMPVYAHHMGMQGYHHQNHNHDPYHQNHRHHHGAGGNGAFESNPY 305

The following BLAST results are available for this feature:

BLAST of MS017002 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882973.1	1.0e-162	96.01	transcription factor MYBC1-like [Benincasa hispida]	[more]
XP_004144322.1	3.8e-162	95.35	transcription factor MYBC1 [Cucumis sativus] >KGN54684.1 hypothetical protein Cs...	[more]
XP_008455739.1	3.2e-161	95.35	PREDICTED: transcription factor PCL1-like [Cucumis melo] >KAA0025859.1 transcrip...	[more]
XP_023543478.1	8.7e-159	93.75	transcription factor MYBC1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6604300.1	2.5e-158	93.11	Transcription factor MYBC1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of MS017002 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22210	7.4e-60	58.65	Transcription factor MYBC1 OS=Arabidopsis thaliana OX=3702 GN=MYBC1 PE=1 SV=1	[more]
Q9SNB4	2.3e-37	39.87	Transcription factor LUX OS=Arabidopsis thaliana OX=3702 GN=LUX PE=1 SV=1	[more]
Q94DH3	2.6e-36	46.78	Transcription factor PCL1 OS=Oryza sativa subsp. japonica OX=39947 GN=PCL1 PE=2 ...	[more]
Q9LTH4	8.2e-35	40.07	Transcription factor BOA OS=Arabidopsis thaliana OX=3702 GN=BOA PE=2 SV=1	[more]
Q940D0	5.7e-20	59.49	Two-component response regulator ARR1 OS=Arabidopsis thaliana OX=3702 GN=ARR1 PE...	[more]

BLAST of MS017002 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0V3	1.8e-162	95.35	HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G42573...	[more]
A0A5A7SKT7	1.6e-161	95.35	Transcription factor PCL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3C2U8	1.6e-161	95.35	transcription factor PCL1-like OS=Cucumis melo OX=3656 GN=LOC103495840 PE=4 SV=1	[more]
A0A6J1HT87	2.1e-158	93.11	transcription factor MYBC1-like OS=Cucurbita maxima OX=3661 GN=LOC111467241 PE=4...	[more]
A0A6J1F331	6.1e-158	93.11	transcription factor MYBC1-like OS=Cucurbita moschata OX=3662 GN=LOC111439239 PE...	[more]

BLAST of MS017002 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10760.1	1.4e-98	63.61	Homeodomain-like superfamily protein	[more]
AT5G05090.1	6.2e-78	57.56	Homeodomain-like superfamily protein	[more]
AT2G40970.1	5.3e-61	58.65	Homeodomain-like superfamily protein	[more]
AT3G46640.1	1.6e-38	39.87	Homeodomain-like superfamily protein	[more]
AT3G46640.2	1.6e-38	39.87	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 101..149 e-value: 2.2E-8 score: 34.2
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 102..153 score: 11.409622
None	No IPR available	GENE3D	1.10.10.60		coord: 94..156 e-value: 7.8E-32 score: 111.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..96
None	No IPR available	PANTHER	PTHR31442:SF31	HOMEODOMAIN-LIKE PROTEIN-RELATED	coord: 1..300
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 98..150 e-value: 3.2E-24 score: 83.0
IPR044841	Transcription factor LUX/BOA-like	PANTHER	PTHR31442	HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 1..300
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 94..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS017002.1	MS017002.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity