MS016998 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TCGTGGAAAGCAAATGTAGTGCCGAAAATAAAGATTGCATGCTGGAAGTTTGTGAACGATATTATTCCTACAAAAACTAATCTTTGCAAGAAAGGACTTTCTACTAACTTGTGTTGTGTTTTTTGTAGGAAGGATGAAGAA TCGTGGAAAGCAAATGTAGTGCCGAAAATAAAGATTGCATGCTGGAAGTTTGTGAACGATATTATTCCTACAAAAACTAATCTTTGCAAGAAAGGACTTTCTACTAACTTGTGTTGTGTTTTTTGTAGGAAGGATGAAGAA TCGTGGAAAGCAAATGTAGTGCCGAAAATAAAGATTGCATGCTGGAAGTTTGTGAACGATATTATTCCTACAAAAACTAATCTTTGCAAGAAAGGACTTTCTACTAACTTGTGTTGTGTTTTTTGTAGGAAGGATGAAGAA SWKANVVPKIKIACWKFVNDIIPTKTNLCKKGLSTNLCCVFCRKDEE Homology
BLAST of MS016998 vs. NCBI nr
Match: XP_021849886.1 (uncharacterized protein LOC110789515 [Spinacia oleracea]) HSP 1 Score: 55.8 bits (133), Expect = 1.1e-04 Identity = 23/45 (51.11%), Postives = 31/45 (68.89%), Query Frame = 0
BLAST of MS016998 vs. NCBI nr
Match: KAB2636102.1 (hypothetical protein D8674_026636 [Pyrus ussuriensis x Pyrus communis]) HSP 1 Score: 55.5 bits (132), Expect = 1.5e-04 Identity = 24/46 (52.17%), Postives = 29/46 (63.04%), Query Frame = 0
BLAST of MS016998 vs. NCBI nr
Match: RXH82922.1 (hypothetical protein DVH24_003420 [Malus domestica]) HSP 1 Score: 54.3 bits (129), Expect = 3.3e-04 Identity = 22/46 (47.83%), Postives = 30/46 (65.22%), Query Frame = 0
BLAST of MS016998 vs. NCBI nr
Match: KGN63144.1 (hypothetical protein Csa_022313 [Cucumis sativus]) HSP 1 Score: 53.9 bits (128), Expect = 4.3e-04 Identity = 20/46 (43.48%), Postives = 31/46 (67.39%), Query Frame = 0
BLAST of MS016998 vs. NCBI nr
Match: XP_021838610.1 (ABC transporter G family member 39-like [Spinacia oleracea]) HSP 1 Score: 53.5 bits (127), Expect = 5.6e-04 Identity = 21/41 (51.22%), Postives = 29/41 (70.73%), Query Frame = 0
BLAST of MS016998 vs. ExPASy TrEMBL
Match: A0A5N5IC60 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_026636 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 7.2e-05 Identity = 24/46 (52.17%), Postives = 29/46 (63.04%), Query Frame = 0
BLAST of MS016998 vs. ExPASy TrEMBL
Match: A0A498ILS0 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_003420 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.6e-04 Identity = 22/46 (47.83%), Postives = 30/46 (65.22%), Query Frame = 0
BLAST of MS016998 vs. ExPASy TrEMBL
Match: A0A0A0LQ43 (zf-RVT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G404950 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 2.1e-04 Identity = 20/46 (43.48%), Postives = 31/46 (67.39%), Query Frame = 0
BLAST of MS016998 vs. ExPASy TrEMBL
Match: A0A540NSN9 (zf-RVT domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_000397 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 3.6e-04 Identity = 22/46 (47.83%), Postives = 28/46 (60.87%), Query Frame = 0
BLAST of MS016998 vs. ExPASy TrEMBL
Match: A0A5E4GGB8 (PREDICTED: reverse mRNAase (Fragment) OS=Prunus dulcis OX=3755 GN=ALMOND_2B018728 PE=4 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 7.9e-04 Identity = 21/41 (51.22%), Postives = 27/41 (65.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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