MS016973 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TGGAAACTAAAAATCCAGTCCAAAATTAAGAACTTTATTTGGAGGATTTTTAGTGACTGTATTCCCTTTATGGGGAACTTACTGAAGAAAGGGCTGGACGTGTATTCGAAGTGTCAGGTTTGTGGAAAGCAGGTTGAAACAACATATCATGTTCTTTTCAAATGTAAAAGAGCGAGAGAAGTGTGG TGGAAACTAAAAATCCAGTCCAAAATTAAGAACTTTATTTGGAGGATTTTTAGTGACTGTATTCCCTTTATGGGGAACTTACTGAAGAAAGGGCTGGACGTGTATTCGAAGTGTCAGGTTTGTGGAAAGCAGGTTGAAACAACATATCATGTTCTTTTCAAATGTAAAAGAGCGAGAGAAGTGTGG TGGAAACTAAAAATCCAGTCCAAAATTAAGAACTTTATTTGGAGGATTTTTAGTGACTGTATTCCCTTTATGGGGAACTTACTGAAGAAAGGGCTGGACGTGTATTCGAAGTGTCAGGTTTGTGGAAAGCAGGTTGAAACAACATATCATGTTCTTTTCAAATGTAAAAGAGCGAGAGAAGTGTGG WKLKIQSKIKNFIWRIFSDCIPFMGNLLKKGLDVYSKCQVCGKQVETTYHVLFKCKRAREVW Homology
BLAST of MS016973 vs. NCBI nr
Match: XP_022145060.1 (uncharacterized protein LOC111014578 [Momordica charantia]) HSP 1 Score: 85.5 bits (210), Expect = 1.8e-13 Identity = 33/51 (64.71%), Postives = 42/51 (82.35%), Query Frame = 0
BLAST of MS016973 vs. NCBI nr
Match: GER49483.1 (RNA-directed DNA polymerase (reversetranscriptase)-related family protein [Striga asiatica]) HSP 1 Score: 79.7 bits (195), Expect = 9.7e-12 Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 0
BLAST of MS016973 vs. NCBI nr
Match: GER28724.1 (RNA-directed DNA polymerase (reversetranscriptase)-related family protein [Striga asiatica]) HSP 1 Score: 78.6 bits (192), Expect = 2.2e-11 Identity = 30/62 (48.39%), Postives = 43/62 (69.35%), Query Frame = 0
BLAST of MS016973 vs. NCBI nr
Match: XP_033139897.1 (uncharacterized protein LOC117131724 [Brassica rapa]) HSP 1 Score: 75.5 bits (184), Expect = 1.8e-10 Identity = 29/62 (46.77%), Postives = 45/62 (72.58%), Query Frame = 0
BLAST of MS016973 vs. NCBI nr
Match: GER31074.1 (RNA-directed DNA polymerase-like protein [Striga asiatica]) HSP 1 Score: 75.5 bits (184), Expect = 1.8e-10 Identity = 28/62 (45.16%), Postives = 45/62 (72.58%), Query Frame = 0
BLAST of MS016973 vs. ExPASy TrEMBL
Match: A0A6J1CTE3 (uncharacterized protein LOC111014578 OS=Momordica charantia OX=3673 GN=LOC111014578 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 8.5e-14 Identity = 33/51 (64.71%), Postives = 42/51 (82.35%), Query Frame = 0
BLAST of MS016973 vs. ExPASy TrEMBL
Match: A0A5A7QVV0 (RNA-directed DNA polymerase (Reversetranscriptase)-related family protein OS=Striga asiatica OX=4170 GN=STAS_26733 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 4.7e-12 Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 0
BLAST of MS016973 vs. ExPASy TrEMBL
Match: A0A5A7P850 (RNA-directed DNA polymerase (Reversetranscriptase)-related family protein OS=Striga asiatica OX=4170 GN=STAS_04536 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.0e-11 Identity = 30/62 (48.39%), Postives = 43/62 (69.35%), Query Frame = 0
BLAST of MS016973 vs. ExPASy TrEMBL
Match: A0A5A7PEH8 (RNA-directed DNA polymerase-like protein OS=Striga asiatica OX=4170 GN=STAS_07050 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 8.8e-11 Identity = 28/62 (45.16%), Postives = 45/62 (72.58%), Query Frame = 0
BLAST of MS016973 vs. ExPASy TrEMBL
Match: A0A5A7PA33 (RNA-directed DNA polymerase (Reversetranscriptase)-related family protein OS=Striga asiatica OX=4170 GN=STAS_05256 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.5e-10 Identity = 29/62 (46.77%), Postives = 42/62 (67.74%), Query Frame = 0
BLAST of MS016973 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 55.8 bits (133), Expect = 1.4e-08 Identity = 22/62 (35.48%), Postives = 38/62 (61.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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