MS016969 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTCCCGATTGCAGGAGATCGAAGCTGATGAATCTGTACTCTTGCGCGTAACACATGCCAATCTCAAGTCCTTCACTTCTGATGTTCGTTTTTCCCTTCAGGTATTTCCATTTTCCCAAAGATCGAACGTTATTTTAGTGTTCGTCGCATCAATTGCCGATTGCCCATTATGGGTTTTGTTTAAAAATTGGTTTTGGGTGTCTTAAATTGTAGATGAGCATAGAATCTGTCAAGGAAAAGCTGTGGAAAAAATGTGGTACTTCTGTAAACTCCATGTGCCTTGAACTCTATGATGACTCCGGTGCTAAAATTTCTGATTTGACGGATAATTCCTTGCCCTTGGGATTTTATTCCCCCCTAGATGGGTACTTCTTCTCCCATTTTCTTTCAATGGGTTCTTTACTAATTTTTACACTGCATTTGCTTTGTTTTCCACTCTGCAAATGGTAATTTATATCCCACTGTTGATGAGAAATTTTAATATGTGGATTGTTTCTTTGAAAAGGTACCGGCTACATATTATTGATCTTGACCCCTCATCAGTTACTTCTGGTGGTTGGCTTGAAGATACCTCACTAGTGGAGAAGTACCAGATTTCTGAAGAAGCTTACGATAAACGTGATGGTTAGTTTCTTGCATAGCTTCCCCTGCTATTAGAAAGCTTGTATGTAATTGCCTCGATTGCTTGTCGAATAGGAAGCTCTCTCTGCACTGAAGGACCCCTCCGCCACCAATGGGGTATTGTGAGTCAGAGCCAAGAATTATAGTATAAACAGGCTTAGATTTTGGTCTTAACAATATGAGGTTGATAGCTATTTTCCAAAATTTTATTGAATCTGCATTTTCTTACGACATGAAGCAGCTGCTATTTAGAAAGCTTGTGGAATGTTAAATGTGTGTGCTTAATTTTTCAAAGAATGTGGGAGAACTTCTTTGAGCCAGTAAGCAGCGATTTTGTGGGAAGTGTGGCTCAAATGAGATAGGAGATTTTTCTCTGGGTAAGAGAGGATTACGGATTAGCTGTAGGAAGTAATTGTTTTTCATCCTTCTTAGTGTCTTAGATCTAAATACTTTTGTAAATATTTTCTTTCCTCTATACAAACCAATTGAGATCTTCAGATTGTTTTTCTGCAATAGCTACCTCTTGTATATTTCAACGAAATAGTTCATCATGAAAAGGTATTGTGCATAATTTACCTGAACTAGTTCATCAGGAAAAGGTATTGTGCATAATTTACCTGAAATAGTTCATCATGAAAAGGTATTGTGCATAATTTACCTACTTTTGGATTTTTTTTCAGATACATTCCGAAAATTCAAGGAAAAATTGGCATCCCAGAACCCATCAGCTTTTGAAAGTAAAGTGAGCCTTCTGTATCCTACTTTTGTATTTAACAATTTCCATAGAAACCTTGTTCATCACTAGTGAATTGTAAATTTGATGTAGAGGCTACCAGTACTTTAGTTAAGTGGAGCTGTGTAAGTGCCATCTCTTAGGATCCTTGAAACCTGGTTTTCATCATGCATTATTGTGAAAATCAGATGCATTTCCATCTCCGTACTTGTCATTTTTGGTCTCTATTTACTGACCAGCCATAAATTTACAGATATCTGATACCTACATGGAAGAACTCTGTGCAAATATCAAGGTTAGTTACCTGCTTTAGATGTGTATAACGTATGTATTCTTTAAAACCTACGAGAATCCTTATTTTGAACAGTTAGAACTTTCATGCTTAAAGTTTTTTGGACGAGACTTCATGTTAACCTATGATTTCCTGGAGACAGTTCGGAAAGATTTTAGAATAGTGAAATATTTGTTTCTTGGTCTTCGCACAGTAATTTTTCAGTCATACATATCTATGTTCTGCTCTGATAACTTTTGTTCTGTCAAGTCATCTCTAAGTTTCCTTGAACAAATCCATGGTTTAAGCAGTCCTTTAAATTTTGGCCTGATAGTTCTAATAAATGCCCCTCTTCTCTTCTTTGTTCGTCCTGAATCGGAACATTTTACTCAATGTCGACTTCAGATAGTTAGCATAAATCTTGCGTCCAGAAATTCTTTCATGGGGGAAGTACTCAACTGCTCCTTCAGAGTTCAGACCTCCCTTTTAGTCGCAGTTTGTGCTAAACTTTGACCTTTTTCATAATTTAGGTAGGTGATAGATGTGAAATTGAACCAGGGGAGAAGAGGGGTGTTGTAAAATTTGTTGGCCGGGCTGAATCGCTTGCTCCTGGATTTTGGGTTGGAGTTCAATATGATGAACCATTGGGGAAAAACGATGGCATGTAAGAAAGCCTTTCACTCTCTTCCGCCTGTGATTAATTTGTTTTTCCTTATATTTTTTTTTCGTTATTCCTTTTGAGTAACTCTAGTACTTCGATAATCACAAATGCACACAAAAAAGTTTCTCTTTGAGAGGGACAAAATATACTACGGACTTTGAAACATATATTTTATGATGACAACCTGCCTCAATTTGGGTAAGTTGTTTCATGTGGCTGTTCTGTTACAGAACAATTTTCACTCTGATCATTCTTAAATTCTTTAGGTTTCAACCTTGTCTACTACTTCTTGGGTCATTGTTTGATAAAGTTGTCATCTAAGAAGCACAGACCCGGGACACATCCACGGTGACACACCAATTTCTAAAAATGTAGGACATGAACATGTCCGGGTCATGTTATTTTTTAAAAAAATCTTTTAGATAATATATGTGTATATATTGATGTAGTAATACTTTTAAATGAATTAACCATACAAATTGAATATAACAAAACAAAATGTGCTTCGTTAATACATAAATGACGTAGTAGAGGGAGGGCAGTCAAAAGTGGAGGCGAAGGCAAAGAGCAATTGGAGGGAGGGAGCATTTTTACGAGAATAGTTCTCCTTTGTTTTTTTCCTTTGTTTTTTTCCTTCTCTAAATTATTTCTTTTTTAGAGGATTTTTAGTGCTTGATGGGCTGGCTGGCTGACCTTTTGTTTTTCATTTGGTTTCTTTTAAGCGGGCTTATATTTTTCTTTAAATTTCATGTAAATTTCATATGGTTTGTCCTTGGTGTGTCCACCACATGTCCAAAATATTTTTAAAAAAGAAAGAAAAAGACACATAGTTTCGTGTGTCGGACATGTGTCCATGCTTCCTAAGTTATCCTCATTCATTCGGGTTGACAGATCAGAATTGCGTTAGAATCCAGCTTTTTGTCGATTCGATAAAGTGGTTCTTCCCAGTTTATTGTTTATGCTGCACTCTTCAGAGTTTTTTATCACATGTTGTGTATACTGAACTAGTGAAACTCGGCAGGGTAAAAGGGATCCGCTATTTTGATTGTCCTCCTCTTCATGGTGCGATGGTTAGGCCAGACAAAGTGAAGGTTTGTTTTGCAGCT ATGGCGTCCCGATTGCAGGAGATCGAAGCTGATGAATCTGTACTCTTGCGCGTAACACATGCCAATCTCAAGTCCTTCACTTCTGATGTTCGTTTTTCCCTTCAGATGAGCATAGAATCTGTCAAGGAAAAGCTGTGGAAAAAATGTGGTACTTCTGTAAACTCCATGTGCCTTGAACTCTATGATGACTCCGGTGCTAAAATTTCTGATTTGACGGATAATTCCTTGCCCTTGGGATTTTATTCCCCCCTAGATGGGTACCGGCTACATATTATTGATCTTGACCCCTCATCAGTTACTTCTGGTGGTTGGCTTGAAGATACCTCACTAGTGGAGAAGTACCAGATTTCTGAAGAAGCTTACGATAAACGTGATGATACATTCCGAAAATTCAAGGAAAAATTGGCATCCCAGAACCCATCAGCTTTTGAAAGTAAAATATCTGATACCTACATGGAAGAACTCTGTGCAAATATCAAGGTAGGTGATAGATGTGAAATTGAACCAGGGGAGAAGAGGGGTGTTGTAAAATTTGTTGGCCGGGCTGAATCGCTTGCTCCTGGATTTTGGGTTGGAGTTCAATATGATGAACCATTGGGGAAAAACGATGGCATGGTAAAAGGGATCCGCTATTTTGATTGTCCTCCTCTTCATGGTGCGATGGTTAGGCCAGACAAAGTGAAGGTTTGTTTTGCAGCT ATGGCGTCCCGATTGCAGGAGATCGAAGCTGATGAATCTGTACTCTTGCGCGTAACACATGCCAATCTCAAGTCCTTCACTTCTGATGTTCGTTTTTCCCTTCAGATGAGCATAGAATCTGTCAAGGAAAAGCTGTGGAAAAAATGTGGTACTTCTGTAAACTCCATGTGCCTTGAACTCTATGATGACTCCGGTGCTAAAATTTCTGATTTGACGGATAATTCCTTGCCCTTGGGATTTTATTCCCCCCTAGATGGGTACCGGCTACATATTATTGATCTTGACCCCTCATCAGTTACTTCTGGTGGTTGGCTTGAAGATACCTCACTAGTGGAGAAGTACCAGATTTCTGAAGAAGCTTACGATAAACGTGATGATACATTCCGAAAATTCAAGGAAAAATTGGCATCCCAGAACCCATCAGCTTTTGAAAGTAAAATATCTGATACCTACATGGAAGAACTCTGTGCAAATATCAAGGTAGGTGATAGATGTGAAATTGAACCAGGGGAGAAGAGGGGTGTTGTAAAATTTGTTGGCCGGGCTGAATCGCTTGCTCCTGGATTTTGGGTTGGAGTTCAATATGATGAACCATTGGGGAAAAACGATGGCATGGTAAAAGGGATCCGCTATTTTGATTGTCCTCCTCTTCATGGTGCGATGGTTAGGCCAGACAAAGTGAAGGTTTGTTTTGCAGCT MASRLQEIEADESVLLRVTHANLKSFTSDVRFSLQMSIESVKEKLWKKCGTSVNSMCLELYDDSGAKISDLTDNSLPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEAYDKRDDTFRKFKEKLASQNPSAFESKISDTYMEELCANIKVGDRCEIEPGEKRGVVKFVGRAESLAPGFWVGVQYDEPLGKNDGMVKGIRYFDCPPLHGAMVRPDKVKVCFAA Homology
BLAST of MS016969 vs. NCBI nr
Match: XP_022153874.1 (tubulin-folding cofactor B [Momordica charantia]) HSP 1 Score: 465.7 bits (1197), Expect = 2.4e-127 Identity = 228/229 (99.56%), Postives = 229/229 (100.00%), Query Frame = 0
BLAST of MS016969 vs. NCBI nr
Match: XP_008455690.1 (PREDICTED: tubulin-folding cofactor B isoform X1 [Cucumis melo]) HSP 1 Score: 450.3 bits (1157), Expect = 1.0e-122 Identity = 218/233 (93.56%), Postives = 227/233 (97.42%), Query Frame = 0
BLAST of MS016969 vs. NCBI nr
Match: KAG6595702.1 (Tubulin-folding cofactor B, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 449.9 bits (1156), Expect = 1.3e-122 Identity = 218/229 (95.20%), Postives = 224/229 (97.82%), Query Frame = 0
BLAST of MS016969 vs. NCBI nr
Match: XP_023517149.1 (tubulin-folding cofactor B [Cucurbita pepo subsp. pepo]) HSP 1 Score: 449.1 bits (1154), Expect = 2.3e-122 Identity = 218/229 (95.20%), Postives = 224/229 (97.82%), Query Frame = 0
BLAST of MS016969 vs. NCBI nr
Match: KAG7027664.1 (Tubulin-folding cofactor B [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 448.4 bits (1152), Expect = 3.9e-122 Identity = 217/228 (95.18%), Postives = 223/228 (97.81%), Query Frame = 0
BLAST of MS016969 vs. ExPASy Swiss-Prot
Match: Q67Z52 (Tubulin-folding cofactor B OS=Arabidopsis thaliana OX=3702 GN=TFCB PE=1 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 2.5e-100 Identity = 171/229 (74.67%), Postives = 201/229 (87.77%), Query Frame = 0
BLAST of MS016969 vs. ExPASy Swiss-Prot
Match: Q20728 (Tubulin-specific chaperone B OS=Caenorhabditis elegans OX=6239 GN=tbcb-1 PE=1 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 1.4e-37 Identity = 90/213 (42.25%), Postives = 124/213 (58.22%), Query Frame = 0
BLAST of MS016969 vs. ExPASy Swiss-Prot
Match: Q9D1E6 (Tubulin-folding cofactor B OS=Mus musculus OX=10090 GN=Tbcb PE=1 SV=2) HSP 1 Score: 142.5 bits (358), Expect = 6.0e-33 Identity = 89/221 (40.27%), Postives = 122/221 (55.20%), Query Frame = 0
BLAST of MS016969 vs. ExPASy Swiss-Prot
Match: Q5E951 (Tubulin-folding cofactor B OS=Bos taurus OX=9913 GN=TBCB PE=2 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 7.8e-33 Identity = 88/219 (40.18%), Postives = 124/219 (56.62%), Query Frame = 0
BLAST of MS016969 vs. ExPASy Swiss-Prot
Match: Q99426 (Tubulin-folding cofactor B OS=Homo sapiens OX=9606 GN=TBCB PE=1 SV=2) HSP 1 Score: 141.7 bits (356), Expect = 1.0e-32 Identity = 89/219 (40.64%), Postives = 121/219 (55.25%), Query Frame = 0
BLAST of MS016969 vs. ExPASy TrEMBL
Match: A0A6J1DKD2 (tubulin-folding cofactor B OS=Momordica charantia OX=3673 GN=LOC111021286 PE=4 SV=1) HSP 1 Score: 465.7 bits (1197), Expect = 1.1e-127 Identity = 228/229 (99.56%), Postives = 229/229 (100.00%), Query Frame = 0
BLAST of MS016969 vs. ExPASy TrEMBL
Match: A0A1S3C118 (tubulin-folding cofactor B isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495804 PE=4 SV=1) HSP 1 Score: 450.3 bits (1157), Expect = 5.0e-123 Identity = 218/233 (93.56%), Postives = 227/233 (97.42%), Query Frame = 0
BLAST of MS016969 vs. ExPASy TrEMBL
Match: A0A6J1HTU0 (tubulin-folding cofactor B OS=Cucurbita maxima OX=3661 GN=LOC111466096 PE=4 SV=1) HSP 1 Score: 448.4 bits (1152), Expect = 1.9e-122 Identity = 218/229 (95.20%), Postives = 224/229 (97.82%), Query Frame = 0
BLAST of MS016969 vs. ExPASy TrEMBL
Match: A0A1S3C1L1 (tubulin-folding cofactor B isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495804 PE=4 SV=1) HSP 1 Score: 447.2 bits (1149), Expect = 4.2e-122 Identity = 216/229 (94.32%), Postives = 224/229 (97.82%), Query Frame = 0
BLAST of MS016969 vs. ExPASy TrEMBL
Match: A0A0A0L346 (CAP-Gly domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G354120 PE=4 SV=1) HSP 1 Score: 446.8 bits (1148), Expect = 5.5e-122 Identity = 216/233 (92.70%), Postives = 225/233 (96.57%), Query Frame = 0
BLAST of MS016969 vs. TAIR 10
Match: AT3G10220.1 (tubulin folding cofactor B ) HSP 1 Score: 366.3 bits (939), Expect = 1.8e-101 Identity = 171/229 (74.67%), Postives = 201/229 (87.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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