MS016940 (gene) Bitter gourd (TR) v1

Overview


Name	MS016940
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	shootin-1-like
Location	scaffold976: 55247 .. 59717 (-)
RNA-Seq Expression	MS016940
Synteny	MS016940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCCTCAAACCACAGCTCCATCTCCACCTACTCAGCCATTGCCTCCTCTTCCTCCCAAATCCAAGAAGAGGCCACTCGACAGAAGCGTTTTTGTCCAATATTCTAAGATGCGCGCCGTTATTAAGGATCTTCGTCCTCATTTTGTCGAGGTAATCGATCCAGCTGAGTTTCCAAAACACAGCTAATTTGTCGTAATCTGTAGTAGCTGTGGACGATTTCTGGATTTTTGTTTCTGGGTTTTCTTCGAATCTGGTAGAAAAAGTTAGCGGCTCGGTTTTAAGACAAATCTTTCTTTTCCTGTTAGTGGGTTTGAGACTGAATTTTGGTGTGGTTTTTCTGCTTTTTGTTGAAGGTTTTGAAGGCTCCCGACTTCCGCAACTGCAAGGCAGCTAATGAAATTCGAGAAAGTAAGTGCATTGTGATTCTCGTTTGTGCCTTTTTTCCATCTATGTTGAAGACATTCTTACTATGTTCAAAATCTGTGTTTCTATGAAACATTTTGACATTTTTTGAACTGTTTGAAATGGTTGTTGTTTGGAACTAATTTGTGAATGAGTTTTCTGTATTCTCGAACAAAAATTGAGGAAAAAACATATTTGACTGATTGTTATCTTAAAATGGTCTTCTCCTCTCCCTCTTGTTCTCACAAGTCACTAGGCAAGAAACAGCTGAAGTTGTTGTTTCGTCTAAATTCATGGATTTGTGATAATGAGTTCAAGTGAAGAAAAACCTTAAATCTTTGCGAGCCACTTGAACTAAAACAACTCATAAAAAGAGCCTTCCAAACAAAAGCGGAAAGCTATTTTCAAAACCACCCCTCCTGTTTCCAGTCCCCATCTTGTTTTCTCATAGTCATTGGTTATTTAATGGTGTTTTCATTCCATTGTTGCTTGTCTAAGTTGTTGAGATTTACCTCAAGAGCGAGTAACAAAAATCAGATTCCCATAAACAAAATCAAGTTGTTCATCTCTAAAAATTCTCTTGTTTCTTAGCAAGATGCACCAAAAATGAACACTGATCATCAGATCTCAATGCACCTTTTCCTCCTTTTGTCAATGGATGACAACCAAGGGAGATTTCCAAAAAGCCTAAATTGAGGAGGGGGCGGCTAGGGAGAAACTGAAATAACTAAGCACGGAAGGCCGAATAAACAAAGGAAGACCTTTACTTTTTTTCTTCCCCTTGACATTTTTGATAGAAACTAGAAATTGGAGTAGAAATGAGTACTTGATATTTTGCGAGTTTCCTTAGCAACCAAATGTAGTCAAGTGGTTGTCCTGTGAGATTAGTCGAAGTACATACAAGCTAGCCTAGATATTCACCGATGTACTAAAAAAAGTTGAAAATTAATCGGGAACGCTGTTGATGTAATAAAGGAAAATTACAAAGTTCCAAGATTTTTGATAGGCAGGGTACTCTTCTGCTGCTACAGTTCAAAATTTGCCTCCCCCCAAATCCCTCCGACAAATGCCTTAGCTAATGACTAATATATGCCTATATCCTAATATTCACCTACTGATATTCATGAATTACTTTGCTCCAGAACTCACCCTGTCCTCAAGATGTGGTTTACCAACCGATTCTCCCGAAACAAATTAAAAAATTGTAGATGGAGTATTAAACTGCACGACCTCATTGAAGAATAAATGCAAAATAACCTTAGAGACAAAAGACGCTCAACATGAAAATTCCAGTAGCCAACCCCATTGCTTTCCATTCGTTTTCTCCTCTATTTGCTGGAATTGTTGGACCCATTCCAACCAAACTGCCCAACCCCTCTAGCACCAATAATGAAACTCCTCTCTTCGAAATAGTTACCTTCAGCTCTTGGCTTTTGAGCCAAGCCCTTGCCCTACTCCAGCCCTCTCCATCGACTTGTTATCTTGTAGAAGTTAGATGATTGCGTAATGTTTTTTTTTTTTTTTTGTGAAAGAAACAATTTCATTGATATATGAAATTACAAGGAGCCCATATAAGGGAGTACAAAAGCCCATAGATGGGTTACAAAAGGCACTTCCAATTGGACAAGAGGGAAGTGTAGCTATAGTAAAGAAAAGTAGGAGAAGTTTTACACCATGATATAGCTTTAAACACTATAGCATCAAAAAAACGCTCAAAAGATTGTGACTTGTCAATGAAGATCCTTTGATTTCTTTCACCCCAAGTAGTCCACAGAAAGGCTCGGATGAAGTTTGTCCATAGCTGTTCCTTTATGTTTTTGAAGGGGTGTCCCATTAAGGTGGCCTCAAGGAGAAGTTTAGGGTCATCTGGTAATGCTGTGGACCAACCAAAAGCCAAGAGGATGACATTCCAAAAATCAGAAGCAAAAGTACAGGAAGTGAAGAGATGTTGTTGAGATTCCATGCTGTTCTTGCAAATGATACACCATTGTGGAGAAATAGCCATAAAAGGGAGTCTTCTTTGTAGCTTATCGTTGGTACTGATGGCTTGGTTACTAAGTTCCCATAGGAAGAAATTCACTTTTTTAGGGCAATTTCCTTTCCAAATAATGTTGTATAGGCTAGTTTGTGGAACTTGGTTGCTATGTGTGAGGTCCTTTGTGAGGGAGCTGGTGGAAAAAGAACCATTTGTTTCTAGTTTCCAGTAAACAACGTCTCTATCTGTTGTTAAATGAATCTCTGATAGCCTAAGGTTAAGATCAGCCCATTCAATTATCTCATGCACAGAGTACGCAACCTCCCCAATCTCCCATGCACAGATTGCGTAATGTTTTTAGCTTCATAATTTGAAGAAAATACTAACTCAATCATCACCCTCATTTTAGCATGAAATCAAGGAAACTGCGACCTTTAGAGACTTCTTACCCTTGAATTGGGAAGCCTAAGAATACATGGTAGAGTTCATGCTCAAGTTTCCTTGATTGGCTCCTAAATTCCAGTGCCATCTTTGCTGTTGTTACAGCCTTGCGGCTGCCCACCTATGTTAACTCCAATCCAAATTTTCAATTTTGGAAGAGATTTTCTCACTCGGGTTTAAAGGGAAGGGGAAATTATTTTACTTCTGTGCCGAGCATTGTTAACCACCCTAGCCTCCAAAGTCCAAACCTTCCAATGAGTGATCAAACCCAATAATCTAACCCTCCCTCAAATGGTAATTCACACAAGCAACTGGGTCTTTATGAGGCTTTGAGTGTAGGTAGGTTTGACTTAAGACATGGAACTCATGTTTGTCTCATAGGTTTATCAAGCTTGGGGTATTTAGGTGGACAAACTCACAAGTTTCAACGGTACGGTACACCAAAACCCCTTTCCGGCTTTCCCTTACACCATGTTTCTAAACCCTTCCTTAATCTACACTCCAAATATAGGTTTCCAAAACTTAGGCTTCCTAACCTTCTACTTAGATCCCTAATCCCCAAGCTTAACAAAATTCCAAACTTGCATCCCAAACGCGCCCAAGGTGTAACCCCAACTTCCACAGATACTTCGGCCCATGATGTTCTTAACACTTCCACAGATACTTAGTCCAGTCCAGCATTGGCTAACAAAAGTATATTTCTTTTTCGAACGGGAGTATAGTCTGGGAAAACGGGAGGGGAGACCCACTTTACTTATATTAAGTCTTCATTCCTCAGAAAGGGTTTGTTCATGGATTCATCCAAGCATAGTTGAAGACCCAAAGACGTTTTTGGTTGGACTGATCCATTTGTACAGCATCTCTTCAGTAAATACCAATTTGCTTTTCTTAATGCAGACTTATTTTTTTGGTGGGACAAATTCAAGAAAATACTCTGAGGTGGAGCGAAAAAGGAAATTGTCCCTGCTGAGTTCATTTAAGGTTAACAGAATTATATAGAAAGGTTCAAGATTTTAAAGTTTTTTCTCTAATTTGCTCCTAAGTTTTTATATTATATATATATATAAATAGGTAGACTGTGTCCATCTGTACAAATTTCTGGTTCGCTACTGTTTAGACTCTGATTTTTTGATTGGTTTGTTTGTTTAAACTTTTCTTCAGTGATGCAAAAATAATAGTCGAATGAAATTACCATAAGACCAATAATTGTGGATGGCACAATCTGAGTTAAGACATGCTGTATAATTAATTTTCTAGGAAGTGTATCTAAACAAACACCTTAAACTTGCAGGAATAAAGCTTCTTCAAGACATGTATAAATTGATGATGGCATCAACTGCAGAAACTCTTTACATCGAGAAGACAACTAACATACTCAATGGTCAGTCCTTGTCAGTTGATAATCAAGATAATCGACGACCCCGAGAGCCACACCATGACGTTAAATTGGGGGATAAGTCATCCGTAAGGTCATATGAAAGTAATTACCTTGAAAAGCAGCGGGTGAATGATGGGCATTCTTCTGGGGCCTATATCGTTGGCGGATCCGCGTTCGGCTGGAATTTCATCACCTTCATGGGGAATGAACCGGTATACTATGGCGTTACGAAGGAAGCATATCGAGAAAAAAATCCCATTGTATCATCAGAATCA

mRNA sequence

CCTCCTCAAACCACAGCTCCATCTCCACCTACTCAGCCATTGCCTCCTCTTCCTCCCAAATCCAAGAAGAGGCCACTCGACAGAAGCGTTTTTGTCCAATATTCTAAGATGCGCGCCGTTATTAAGGATCTTCGTCCTCATTTTGTCGAGGTTTTGAAGGCTCCCGACTTCCGCAACTGCAAGGCAGCTAATGAAATTCGAGAAAGAATAAAGCTTCTTCAAGACATGTATAAATTGATGATGGCATCAACTGCAGAAACTCTTTACATCGAGAAGACAACTAACATACTCAATGGTCAGTCCTTGTCAGTTGATAATCAAGATAATCGACGACCCCGAGAGCCACACCATGACGTTAAATTGGGGGATAAGTCATCCGTAAGGTCATATGAAAGTAATTACCTTGAAAAGCAGCGGGTGAATGATGGGCATTCTTCTGGGGCCTATATCGTTGGCGGATCCGCGTTCGGCTGGAATTTCATCACCTTCATGGGGAATGAACCGGTATACTATGGCGTTACGAAGGAAGCATATCGAGAAAAAAATCCCATTGTATCATCAGAATCA

Coding sequence (CDS)

CCTCCTCAAACCACAGCTCCATCTCCACCTACTCAGCCATTGCCTCCTCTTCCTCCCAAATCCAAGAAGAGGCCACTCGACAGAAGCGTTTTTGTCCAATATTCTAAGATGCGCGCCGTTATTAAGGATCTTCGTCCTCATTTTGTCGAGGTTTTGAAGGCTCCCGACTTCCGCAACTGCAAGGCAGCTAATGAAATTCGAGAAAGAATAAAGCTTCTTCAAGACATGTATAAATTGATGATGGCATCAACTGCAGAAACTCTTTACATCGAGAAGACAACTAACATACTCAATGGTCAGTCCTTGTCAGTTGATAATCAAGATAATCGACGACCCCGAGAGCCACACCATGACGTTAAATTGGGGGATAAGTCATCCGTAAGGTCATATGAAAGTAATTACCTTGAAAAGCAGCGGGTGAATGATGGGCATTCTTCTGGGGCCTATATCGTTGGCGGATCCGCGTTCGGCTGGAATTTCATCACCTTCATGGGGAATGAACCGGTATACTATGGCGTTACGAAGGAAGCATATCGAGAAAAAAATCCCATTGTATCATCAGAATCA

Protein sequence

PPQTTAPSPPTQPLPPLPPKSKKRPLDRSVFVQYSKMRAVIKDLRPHFVEVLKAPDFRNCKAANEIRERIKLLQDMYKLMMASTAETLYIEKTTNILNGQSLSVDNQDNRRPREPHHDVKLGDKSSVRSYESNYLEKQRVNDGHSSGAYIVGGSAFGWNFITFMGNEPVYYGVTKEAYREKNPIVSSES

Homology

[Close]

BLAST of MS016940 vs. NCBI nr
Match: XP_022156104.1 (uncharacterized protein LOC111023072 [Momordica charantia])

HSP 1 Score: 370.9 bits (951), Expect = 6.4e-99
Identity = 188/189 (99.47%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   PPQTTAPSPPTQPLPPLPPKSKKRPLDRSVFVQYSKMRAVIKDLRPHFVEVLKAPDFRNC 60
           PPQTTAPSPPTQPLPPLPPKSKKRPLDRSVFVQYSKMRAVIKDLRPHFVEVLKAPDFRNC
Sbjct: 11  PPQTTAPSPPTQPLPPLPPKSKKRPLDRSVFVQYSKMRAVIKDLRPHFVEVLKAPDFRNC 70

Query: 61  KAANEIRERIKLLQDMYKLMMASTAETLYIEKTTNILNGQSLSVDNQDNRRPREPHHDVK 120
           KAANEIRERIKLLQDMYKLMMASTAETLYIEKTTNIL+GQSLSVDNQDNRRPREPHHDVK
Sbjct: 71  KAANEIRERIKLLQDMYKLMMASTAETLYIEKTTNILDGQSLSVDNQDNRRPREPHHDVK 130

Query: 121 LGDKSSVRSYESNYLEKQRVNDGHSSGAYIVGGSAFGWNFITFMGNEPVYYGVTKEAYRE 180
           LGDKSSVRSYESNYLEKQRVNDGHSSGAYIVGGSAFGWNFITFMGNEPVYYGVTKEAYRE
Sbjct: 131 LGDKSSVRSYESNYLEKQRVNDGHSSGAYIVGGSAFGWNFITFMGNEPVYYGVTKEAYRE 190

Query: 181 KNPIVSSES 190
           KNPIVSSES
Sbjct: 191 KNPIVSSES 199

[Close]

BLAST of MS016940 vs. NCBI nr
Match: XP_038874738.1 (uncharacterized protein LOC120067276 [Benincasa hispida])

HSP 1 Score: 282.3 bits (721), Expect = 3.0e-72
Identity = 147/193 (76.17%), Postives = 164/193 (84.97%), Query Frame = 0


Query: 2   PQTTAPSPPTQPLPPLPPKSKKRPLDRSVFVQYSKMRAVIKDLRPHFVEVLKAPDFRNCK 61
           P +TAPS   Q LPPLPPK KKRPLDR+ ++QY+KMRAVI+DLRPHF+EVLK PDFRNCK
Sbjct: 17  PPSTAPS---QTLPPLPPKLKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTPDFRNCK 76

Query: 62  AANEIRERIKLLQDMYKLMMASTAETLYIEKTTNILNGQSLSVDNQDNRRPREPHHDVKL 121
           AANEIRERIK+LQDMY LMMA+T+ETLYIEKT+N+L+GQS SVDNQD RR RE HHD KL
Sbjct: 77  AANEIRERIKVLQDMYILMMATTSETLYIEKTSNVLDGQSSSVDNQD-RRSREQHHDGKL 136

Query: 122 GDKSSVRSYESN-----YLEKQRVNDGHSSGAYIVGGSAFGWNFITFMGNEPVYYGVTKE 181
           GDKSS +SYESN       EKQR NDG  SG+YIVGGSAFGWNFI F G EPVYYG+TKE
Sbjct: 137 GDKSSTKSYESNNPSSYATEKQRANDGQISGSYIVGGSAFGWNFIAFTGTEPVYYGITKE 196

Query: 182 AYREKNPIVSSES 190
            +REKNPIVSSES
Sbjct: 197 VFREKNPIVSSES 205

[Close]

BLAST of MS016940 vs. NCBI nr
Match: KAG6575171.1 (hypothetical protein SDJN03_25810, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 281.2 bits (718), Expect = 6.7e-72
Identity = 144/193 (74.61%), Postives = 165/193 (85.49%), Query Frame = 0


Query: 2   PQTTAPSPPTQPLPPLPPKSKKRPLDRSVFVQYSKMRAVIKDLRPHFVEVLKAPDFRNCK 61
           P +TAPS PT PLPPLPPK KKRPLDR+ ++QY+KMRAVI+DLRPHF+EVLK P+FRNCK
Sbjct: 13  PPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTPEFRNCK 72

Query: 62  AANEIRERIKLLQDMYKLMMASTAETLYIEKTTNILNGQSLSVDNQDNRRPREPHHDVKL 121
           AANEIRERIKLLQDMY +MMA+T+E+LYIEKT+N+L+GQSLSVDNQD +R RE HHD K 
Sbjct: 73  AANEIRERIKLLQDMYIMMMATTSESLYIEKTSNVLDGQSLSVDNQD-QRSREQHHDGKQ 132

Query: 122 GDKSSVRSYESNY-----LEKQRVNDGHSSGAYIVGGSAFGWNFITFMGNEPVYYGVTKE 181
           G KSS +SYESN+      EKQ  NDG +SG YIVGGSAFGWNFI F G EPVYYGVTKE
Sbjct: 133 GGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKE 192

Query: 182 AYREKNPIVSSES 190
            +R+KNPIVSSES
Sbjct: 193 EFRKKNPIVSSES 204

[Close]

BLAST of MS016940 vs. NCBI nr
Match: XP_023006667.1 (uncharacterized protein LOC111499323 [Cucurbita maxima])

HSP 1 Score: 280.4 bits (716), Expect = 1.1e-71
Identity = 144/193 (74.61%), Postives = 165/193 (85.49%), Query Frame = 0


Query: 2   PQTTAPSPPTQPLPPLPPKSKKRPLDRSVFVQYSKMRAVIKDLRPHFVEVLKAPDFRNCK 61
           P +TAPS PT PLPPLPPK KKRPLDR+ ++QY+KMRAVI+DLRPHF+EVLK P+FRNCK
Sbjct: 13  PPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTPEFRNCK 72

Query: 62  AANEIRERIKLLQDMYKLMMASTAETLYIEKTTNILNGQSLSVDNQDNRRPREPHHDVKL 121
           AANEIRERIKLLQDMY LMMA+T+E+LYIEKT+N+L+GQS+SVDNQD +R RE +HD K 
Sbjct: 73  AANEIRERIKLLQDMYILMMATTSESLYIEKTSNVLDGQSISVDNQD-QRSREQYHDGKQ 132

Query: 122 GDKSSVRSYESNY-----LEKQRVNDGHSSGAYIVGGSAFGWNFITFMGNEPVYYGVTKE 181
           G KSS +SYESN+      EKQ  NDG +SG YIVGGSAFGWNFI F G EPVYYGVTKE
Sbjct: 133 GGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKE 192

Query: 182 AYREKNPIVSSES 190
            +REKNPIVSSES
Sbjct: 193 EFREKNPIVSSES 204

[Close]

BLAST of MS016940 vs. NCBI nr
Match: XP_023548253.1 (uncharacterized protein LOC111806942 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 280.0 bits (715), Expect = 1.5e-71
Identity = 145/193 (75.13%), Postives = 164/193 (84.97%), Query Frame = 0


Query: 2   PQTTAPSPPTQPLPPLPPKSKKRPLDRSVFVQYSKMRAVIKDLRPHFVEVLKAPDFRNCK 61
           P +TAPS PT PLPPLPPK KKRPLDR+ ++QY+KMRAVI+DLRPHF+EVLK P+FRNCK
Sbjct: 13  PPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTPEFRNCK 72

Query: 62  AANEIRERIKLLQDMYKLMMASTAETLYIEKTTNILNGQSLSVDNQDNRRPREPHHDVKL 121
           AANEIRERIKLLQDMY LMMA+T+E+LYIEKT+ +L+GQSLSVDNQD +R RE HHD K 
Sbjct: 73  AANEIRERIKLLQDMYILMMATTSESLYIEKTSIVLDGQSLSVDNQD-QRSREQHHDGKQ 132

Query: 122 GDKSSVRSYESNY-----LEKQRVNDGHSSGAYIVGGSAFGWNFITFMGNEPVYYGVTKE 181
           G KSS +SYESN+      EKQ  NDG +SG YIVGGSAFGWNFI F G EPVYYGVTKE
Sbjct: 133 GGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKE 192

Query: 182 AYREKNPIVSSES 190
            +REKNPIVSSES
Sbjct: 193 EFREKNPIVSSES 204

[Close]

BLAST of MS016940 vs. ExPASy TrEMBL
Match: A0A6J1DSC5 (uncharacterized protein LOC111023072 OS=Momordica charantia OX=3673 GN=LOC111023072 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 3.1e-99
Identity = 188/189 (99.47%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   PPQTTAPSPPTQPLPPLPPKSKKRPLDRSVFVQYSKMRAVIKDLRPHFVEVLKAPDFRNC 60
           PPQTTAPSPPTQPLPPLPPKSKKRPLDRSVFVQYSKMRAVIKDLRPHFVEVLKAPDFRNC
Sbjct: 11  PPQTTAPSPPTQPLPPLPPKSKKRPLDRSVFVQYSKMRAVIKDLRPHFVEVLKAPDFRNC 70

Query: 61  KAANEIRERIKLLQDMYKLMMASTAETLYIEKTTNILNGQSLSVDNQDNRRPREPHHDVK 120
           KAANEIRERIKLLQDMYKLMMASTAETLYIEKTTNIL+GQSLSVDNQDNRRPREPHHDVK
Sbjct: 71  KAANEIRERIKLLQDMYKLMMASTAETLYIEKTTNILDGQSLSVDNQDNRRPREPHHDVK 130

Query: 121 LGDKSSVRSYESNYLEKQRVNDGHSSGAYIVGGSAFGWNFITFMGNEPVYYGVTKEAYRE 180
           LGDKSSVRSYESNYLEKQRVNDGHSSGAYIVGGSAFGWNFITFMGNEPVYYGVTKEAYRE
Sbjct: 131 LGDKSSVRSYESNYLEKQRVNDGHSSGAYIVGGSAFGWNFITFMGNEPVYYGVTKEAYRE 190

Query: 181 KNPIVSSES 190
           KNPIVSSES
Sbjct: 191 KNPIVSSES 199

[Close]

BLAST of MS016940 vs. ExPASy TrEMBL
Match: A0A6J1KWG6 (uncharacterized protein LOC111499323 OS=Cucurbita maxima OX=3661 GN=LOC111499323 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 5.5e-72
Identity = 144/193 (74.61%), Postives = 165/193 (85.49%), Query Frame = 0


Query: 2   PQTTAPSPPTQPLPPLPPKSKKRPLDRSVFVQYSKMRAVIKDLRPHFVEVLKAPDFRNCK 61
           P +TAPS PT PLPPLPPK KKRPLDR+ ++QY+KMRAVI+DLRPHF+EVLK P+FRNCK
Sbjct: 13  PPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTPEFRNCK 72

Query: 62  AANEIRERIKLLQDMYKLMMASTAETLYIEKTTNILNGQSLSVDNQDNRRPREPHHDVKL 121
           AANEIRERIKLLQDMY LMMA+T+E+LYIEKT+N+L+GQS+SVDNQD +R RE +HD K 
Sbjct: 73  AANEIRERIKLLQDMYILMMATTSESLYIEKTSNVLDGQSISVDNQD-QRSREQYHDGKQ 132

Query: 122 GDKSSVRSYESNY-----LEKQRVNDGHSSGAYIVGGSAFGWNFITFMGNEPVYYGVTKE 181
           G KSS +SYESN+      EKQ  NDG +SG YIVGGSAFGWNFI F G EPVYYGVTKE
Sbjct: 133 GGKSSTKSYESNHPSSHAPEKQGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKE 192

Query: 182 AYREKNPIVSSES 190
            +REKNPIVSSES
Sbjct: 193 EFREKNPIVSSES 204

[Close]

BLAST of MS016940 vs. ExPASy TrEMBL
Match: A0A6J1H517 (uncharacterized protein LOC111460466 OS=Cucurbita moschata OX=3662 GN=LOC111460466 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.2e-71
Identity = 143/193 (74.09%), Postives = 164/193 (84.97%), Query Frame = 0


Query: 2   PQTTAPSPPTQPLPPLPPKSKKRPLDRSVFVQYSKMRAVIKDLRPHFVEVLKAPDFRNCK 61
           P +TAPS PT PLPPLPPK KKRPLDR+ ++QY+KMRAVI+DLRPHF+EVLK P+FRNCK
Sbjct: 13  PPSTAPSQPTPPLPPLPPKPKKRPLDRNAYIQYTKMRAVIRDLRPHFLEVLKTPEFRNCK 72

Query: 62  AANEIRERIKLLQDMYKLMMASTAETLYIEKTTNILNGQSLSVDNQDNRRPREPHHDVKL 121
           AANEIRERIKLLQDMY +MMA+T+E+LYIEKT+N+L+GQSLSVDNQD +R RE HHD K 
Sbjct: 73  AANEIRERIKLLQDMYIMMMATTSESLYIEKTSNVLDGQSLSVDNQD-QRSREQHHDGKQ 132

Query: 122 GDKSSVRSYESNY-----LEKQRVNDGHSSGAYIVGGSAFGWNFITFMGNEPVYYGVTKE 181
           G KSS +SYESN+      EK   NDG +SG YIVGGSAFGWNFI F G EPVYYGVTKE
Sbjct: 133 GGKSSTKSYESNHPSSHAPEKHGANDGQTSGTYIVGGSAFGWNFIAFTGTEPVYYGVTKE 192

Query: 182 AYREKNPIVSSES 190
            +R+KNPIVSSES
Sbjct: 193 EFRKKNPIVSSES 204

[Close]

BLAST of MS016940 vs. ExPASy TrEMBL
Match: A0A1S3C7F7 (uncharacterized protein LOC103497729 OS=Cucumis melo OX=3656 GN=LOC103497729 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 8.0e-63
Identity = 132/193 (68.39%), Postives = 151/193 (78.24%), Query Frame = 0


Query: 2   PQTTAPSPPTQPLPPLPPKSKKRPLDRSVFVQYSKMRAVIKDLRPHFVEVLKAPDFRNCK 61
           P TTAPS   Q LPPLPPK KKRPLDR+ +VQ++KMRAVI+DLRPHF+EV+K PDFRNCK
Sbjct: 9   PPTTAPS---QTLPPLPPKLKKRPLDRNAYVQFTKMRAVIRDLRPHFLEVMKTPDFRNCK 68

Query: 62  AANEIRERIKLLQDMYKLMMASTAETLYIEKTTNILNGQSLSVDNQDNRRPREPHHDVKL 121
           AA EIRERIK+LQDMY  MM++T+ETLYIEKT N+L+G +           RE HHD KL
Sbjct: 69  AATEIRERIKVLQDMYASMMSATSETLYIEKTCNVLDGLA-----------REQHHDGKL 128

Query: 122 GDKSSVRSYESN-----YLEKQRVNDGHSSGAYIVGGSAFGWNFITFMGNEPVYYGVTKE 181
           GDKSS +SYESN       EKQR NDG  SG+Y+VGGSAFGWNFI F G EPVYYG+TKE
Sbjct: 129 GDKSSTKSYESNNPSSYAPEKQRANDGPISGSYVVGGSAFGWNFIAFTGTEPVYYGITKE 187

Query: 182 AYREKNPIVSSES 190
            +REKNPI SSES
Sbjct: 189 VFREKNPIDSSES 187

[Close]

BLAST of MS016940 vs. ExPASy TrEMBL
Match: A0A0A0K7F0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G003420 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.8e-60
Identity = 125/193 (64.77%), Postives = 150/193 (77.72%), Query Frame = 0


Query: 3   QTTAPSPPTQPLPPLPPKSKKRPLDRSVFVQYSKMRAVIKDLRPHFVEVLKAPDFRNCKA 62
           +T A + P+Q LPPLPPK KKRP DR+ ++Q++KMR VI+DLRPHF+EV+K PDFRNCKA
Sbjct: 3   ETKATTAPSQTLPPLPPKLKKRPFDRNAYIQFTKMRTVIRDLRPHFLEVIKTPDFRNCKA 62

Query: 63  ANEIRERIKLLQDMYKLMMASTAETLYIEKT-TNILNGQSLSVDNQDNRRPREPHHDVKL 122
           A EIRERIK+LQD+Y +MMA+T+ETLYIEKT +N+L+G +           RE HHD  L
Sbjct: 63  ATEIRERIKVLQDVYTMMMAATSETLYIEKTSSNVLDGLA-----------REQHHDGNL 122

Query: 123 GDKSSVRSYE-----SNYLEKQRVNDGHSSGAYIVGGSAFGWNFITFMGNEPVYYGVTKE 182
           GDKSS +SYE     SN  EKQR NDG  SG+Y+VGGSAFGWNFI F G EPVYYG+TKE
Sbjct: 123 GDKSSTKSYESNNPSSNAPEKQRANDGQISGSYVVGGSAFGWNFIAFTGTEPVYYGITKE 182

Query: 183 AYREKNPIVSSES 190
            +REKNPI SSES
Sbjct: 183 VFREKNPIDSSES 184

[Close]

BLAST of MS016940 vs. TAIR 10
Match: AT1G01730.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 1; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 98.2 bits (243), Expect = 7.5e-21
Identity = 72/194 (37.11%), Postives = 109/194 (56.19%), Query Frame = 0


Query: 1   PPQTTAPSPPTQPLPPLPPKSKKRPLDRSVFVQ---YSKMRAVIKDLRPHFVEVLKAPDF 60
           P Q TAP P T    P   + +KR L+ ++ ++   Y KMR ++KDLRPH +EVL+ PD 
Sbjct: 46  PAQMTAP-PSTVTTDP-SSRGRKRALEANLQIESSNYYKMRLLVKDLRPHVLEVLRTPDL 105

Query: 61  RNCKAANEIRERIKLLQDMYKLMMASTAETLYIEKTTNILNGQSLSVDNQDNRRPREPHH 120
           RN KA  EI+E++KL+  +Y+ M+  + +     K+ ++ NG++ +              
Sbjct: 106 RNSKAVIEIQEKMKLMLQLYEEMIGESPKREKTAKSDSLSNGKATTTTTTTT-------- 165

Query: 121 DVKLGDKSSVRSYESNYLEKQRVNDGHSSGAYIVGGSAFGWNFITF--MGNEPVYYGVTK 180
                  S +RS E+    ++  +DG   G  +VGGSAFGWNFIT    G EPVY G++K
Sbjct: 166 -------SVLRSSET----EKHSSDG--DGDKVVGGSAFGWNFITSGGPGTEPVYSGMSK 216

Query: 181 EAYREKNPIVSSES 190
           E YR  +PI+  E+
Sbjct: 226 EEYRSSHPIMQVEA 216

The following BLAST results are available for this feature:

BLAST of MS016940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156104.1	6.4e-99	99.47	uncharacterized protein LOC111023072 [Momordica charantia]	[more]
XP_038874738.1	3.0e-72	76.17	uncharacterized protein LOC120067276 [Benincasa hispida]	[more]
KAG6575171.1	6.7e-72	74.61	hypothetical protein SDJN03_25810, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023006667.1	1.1e-71	74.61	uncharacterized protein LOC111499323 [Cucurbita maxima]	[more]
XP_023548253.1	1.5e-71	75.13	uncharacterized protein LOC111806942 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS016940 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS016940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DSC5	3.1e-99	99.47	uncharacterized protein LOC111023072 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1KWG6	5.5e-72	74.61	uncharacterized protein LOC111499323 OS=Cucurbita maxima OX=3661 GN=LOC111499323...	[more]
A0A6J1H517	1.2e-71	74.09	uncharacterized protein LOC111460466 OS=Cucurbita moschata OX=3662 GN=LOC1114604...	[more]
A0A1S3C7F7	8.0e-63	68.39	uncharacterized protein LOC103497729 OS=Cucumis melo OX=3656 GN=LOC103497729 PE=...	[more]
A0A0A0K7F0	2.8e-60	64.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G003420 PE=4 SV=1	[more]

BLAST of MS016940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01730.1	7.5e-21	37.11	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR35459:SF2	T1N6.14 PROTEIN	coord: 5..183
None	No IPR available	PANTHER	PTHR35459	T1N6.14 PROTEIN	coord: 5..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS016940.1	MS016940.1	mRNA