MS016933 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TCTTCCACTTATTTGATGGGATGGTTAAGAGATTATCTATGGTTAAACTCTTCACAACTTATCAATGGATATAATCCTTTTGGTATGAATAGTTTATCAGTCTGGGCGTGGGTGTTCTTATTTGGACATCTTGTTTGGGCTACTGGATTTATGTTCTTAATTTCCTGGCGCGGATATTGGCAAGAATTGATTGAAACTTTAGCATGGGCTCACGAACGCACACCTTTGGCT TCTTCCACTTATTTGATGGGATGGTTAAGAGATTATCTATGGTTAAACTCTTCACAACTTATCAATGGATATAATCCTTTTGGTATGAATAGTTTATCAGTCTGGGCGTGGGTGTTCTTATTTGGACATCTTGTTTGGGCTACTGGATTTATGTTCTTAATTTCCTGGCGCGGATATTGGCAAGAATTGATTGAAACTTTAGCATGGGCTCACGAACGCACACCTTTGGCT TCTTCCACTTATTTGATGGGATGGTTAAGAGATTATCTATGGTTAAACTCTTCACAACTTATCAATGGATATAATCCTTTTGGTATGAATAGTTTATCAGTCTGGGCGTGGGTGTTCTTATTTGGACATCTTGTTTGGGCTACTGGATTTATGTTCTTAATTTCCTGGCGCGGATATTGGCAAGAATTGATTGAAACTTTAGCATGGGCTCACGAACGCACACCTTTGGCT SSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWVFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLA Homology
BLAST of MS016933 vs. NCBI nr
Match: YP_009776565.1 (photosystem I P700 apoprotein A2 [Phyllanthus amarus] >QJA27051.1 photosystem I P700 apoprotein A2 [Phyllanthus amarus]) HSP 1 Score: 171.0 bits (432), Expect = 4.0e-39 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of MS016933 vs. NCBI nr
Match: QBA68155.1 (photosystem I P700 chlorophyll a apoprotein A2 [Amphilophium dasytrichum]) HSP 1 Score: 171.0 bits (432), Expect = 4.0e-39 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of MS016933 vs. NCBI nr
Match: YP_009662617.1 (photosystem I P700 apoprotein A2 [Amphilophium dolichoides] >YP_009662714.1 photosystem I P700 apoprotein A2 [Amphilophium carolinae] >QBA68153.1 photosystem I P700 chlorophyll a apoprotein A2 [Amphilophium crucigerum] >QBA68150.1 photosystem I P700 chlorophyll a apoprotein A2 [Amphilophium carolinae] >QBA68156.1 photosystem I P700 chlorophyll a apoprotein A2 [Amphilophium dolichoides] >QCU48139.1 photosystem I P700 apoprotein A2 [Amphilophium dolichoides] >QCU48236.1 photosystem I P700 apoprotein A2 [Amphilophium carolinae]) HSP 1 Score: 171.0 bits (432), Expect = 4.0e-39 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of MS016933 vs. NCBI nr
Match: YP_009662530.1 (photosystem I P700 apoprotein A2 [Amphilophium lactiflorum] >QBA68164.1 photosystem I P700 chlorophyll a apoprotein A2 [Amphilophium lactiflorum] >QCU48052.1 photosystem I P700 apoprotein A2 [Amphilophium lactiflorum]) HSP 1 Score: 171.0 bits (432), Expect = 4.0e-39 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of MS016933 vs. NCBI nr
Match: YP_009661179.1 (photosystem I P700 apoprotein A2 [Amphilophium chocoense] >YP_009661266.1 photosystem I P700 apoprotein A2 [Amphilophium cuneifolium] >QBA68144.1 photosystem I P700 chlorophyll a apoprotein A2 [Amphilophium arenarium] >QBA68152.1 photosystem I P700 chlorophyll a apoprotein A2 [Amphilophium cremersii] >QBA68159.1 photosystem I P700 chlorophyll a apoprotein A2 [Amphilophium elongatum] >QBA68151.1 photosystem I P700 chlorophyll a apoprotein A2 [Amphilophium chocoense] >QBA68154.1 photosystem I P700 chlorophyll a apoprotein A2 [Amphilophium cuneifolium]) HSP 1 Score: 171.0 bits (432), Expect = 4.0e-39 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of MS016933 vs. ExPASy Swiss-Prot
Match: Q85FM0 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Adiantum capillus-veneris OX=13818 GN=psaB PE=2 SV=2) HSP 1 Score: 169.9 bits (429), Expect = 1.2e-41 Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of MS016933 vs. ExPASy Swiss-Prot
Match: A4QJB4 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Aethionema cordifolium OX=434059 GN=psaB PE=3 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 1.2e-41 Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of MS016933 vs. ExPASy Swiss-Prot
Match: A4QJJ8 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Aethionema grandiflorum OX=72657 GN=psaB PE=3 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 1.2e-41 Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of MS016933 vs. ExPASy Swiss-Prot
Match: A1EA07 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Agrostis stolonifera OX=63632 GN=psaB PE=3 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 1.2e-41 Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of MS016933 vs. ExPASy Swiss-Prot
Match: Q33332 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Antirrhinum majus OX=4151 GN=psaB PE=3 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 1.2e-41 Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of MS016933 vs. ExPASy TrEMBL
Match: A0A411EH35 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Amphilophium ecuadorense OX=2358314 GN=psaB PE=3 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 1.9e-39 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of MS016933 vs. ExPASy TrEMBL
Match: A0A411EGX5 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Amphilophium dusenianum OX=2358313 GN=psaB PE=3 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 1.9e-39 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of MS016933 vs. ExPASy TrEMBL
Match: A0A411EH45 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Amphilophium paniculatum OX=353927 GN=psaB PE=3 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 1.9e-39 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of MS016933 vs. ExPASy TrEMBL
Match: A0A411EGX9 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Amphilophium chocoense OX=2358323 GN=psaB PE=3 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 1.9e-39 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of MS016933 vs. ExPASy TrEMBL
Match: A0A411EH24 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Amphilophium pilosum OX=2358320 GN=psaB PE=3 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 1.9e-39 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of MS016933 vs. TAIR 10
Match: ATCG00340.1 (Photosystem I, PsaA/PsaB protein ) HSP 1 Score: 169.9 bits (429), Expect = 8.2e-43 Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of MS016933 vs. TAIR 10
Match: ATCG00350.1 (Photosystem I, PsaA/PsaB protein ) HSP 1 Score: 81.6 bits (200), Expect = 2.9e-16 Identity = 39/77 (50.65%), Postives = 49/77 (63.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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