MS016891 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGATAATGGAGAAACGGCCGTATCGGTCGGTGAAGGAAGCCGTCGAGCTGTACGGCAAACGAATTTTAGAACCGGACCTCTACGCCAACGTTCTCCACCAGGTCAATTTTCAATTTACTACATCTCAACTCAATTCACACACGTATATATATATATATATTTGTAATTTTAGTACATTATTATTGATATATATGATAAAATATTTTTTTTAATCCTCCAATCTCACCGTTCTTTTTTTTTTATATCATTATGTCTCCAATCCCACCGCTGATGAAAAACAACTATTTATCAAGGAATGAACAACTATTTCCTTGCCACTATTAAATATCTGACGATTAAAGGAGAAAAATATAAAAGTAAAGTTTTTTCTAAGCAAGTTCCTCTTTATTAGAAAATAGTAAAAAGTTAAATACTTTTCATACCAATTATATTTTTGATAAGTAAGAAAGAGAAATGTATGAAAAAAGAAAGGAAAATATTTGACTCCAGAGAGAATGGATCTTGTCCTCGCCACAAACTAAGATAAATAAATGTAAAAATAGAGATTTTTTTTAAATAATAAGTTTTCAATTTTACAATTGCGCAATGACAGTATCACTCCTAAGATTGAAAAGTAAAAAGAGATTAAAAAATCTACAATTTTTCATTTGTTTAATTTAGAACATACTACTTTTTGTAATTTTTGAAAAAGAAAAACATGATGTAACCTTTATACCATATATCCGAAATTAATATCAATATATATCTCCATGAATTAAAAGATTTAACATATTAGGGGGCAATCCAATATTTTTATATATCTGAAAAATATGATTATATATCAAAATGTCAACAAAAACATCATATTATAACTTCTTTTTTTGTTTTCGTGATTTATAAAAAAATATATAAGAAGTTTTGACATGTATGTCTACATTAACAGTTTAATTCTAACTTTTAAAAAGTGACAAGAAATACGACAATGTTAATAGATAATGAATATTTGGCTTTTGTGAATAAATTTGATTTAATATATTGGTGCCATAGATGGAGAGTGAAGAAAATGAAGACGAGAACAACCTTATGAAGATCAAAAGCGTGAGAGATGAATTAGATATTGCAAAGCAAAATTTGGAGAAAGCAAAAGAACGAAGTGTAGTCATGGCACGATCTCTGTCTTCTCTCCAAGAAGAGCTGGAAGATACAAAGCGTAAGCTCCAAATGCTCAAAGAAAGAGAATCCATGGGAAGTTTTGAAACTGTGGATGGTTCTTGGAAATTTGATTTCAAGACGCAATCGCAGAGATTCGAAGAAGAAGAAGAAAGTGAAGCTAATTGTGAGAAGCAACATGTGAATATCGATGCACAGAATGGTCCATCTGTGAAGAAGAAGGTAAGAGACACGATGAAGAAATCATCAATATTGATGAAGGGATTTTTTTCTAAGAAAAGG ATGAAGATAATGGAGAAACGGCCGTATCGGTCGGTGAAGGAAGCCGTCGAGCTGTACGGCAAACGAATTTTAGAACCGGACCTCTACGCCAACGTTCTCCACCAGATGGAGAGTGAAGAAAATGAAGACGAGAACAACCTTATGAAGATCAAAAGCGTGAGAGATGAATTAGATATTGCAAAGCAAAATTTGGAGAAAGCAAAAGAACGAAGTGTAGTCATGGCACGATCTCTGTCTTCTCTCCAAGAAGAGCTGGAAGATACAAAGCGTAAGCTCCAAATGCTCAAAGAAAGAGAATCCATGGGAAGTTTTGAAACTGTGGATGGTTCTTGGAAATTTGATTTCAAGACGCAATCGCAGAGATTCGAAGAAGAAGAAGAAAGTGAAGCTAATTGTGAGAAGCAACATGTGAATATCGATGCACAGAATGGTCCATCTGTGAAGAAGAAGGTAAGAGACACGATGAAGAAATCATCAATATTGATGAAGGGATTTTTTTCTAAGAAAAGG ATGAAGATAATGGAGAAACGGCCGTATCGGTCGGTGAAGGAAGCCGTCGAGCTGTACGGCAAACGAATTTTAGAACCGGACCTCTACGCCAACGTTCTCCACCAGATGGAGAGTGAAGAAAATGAAGACGAGAACAACCTTATGAAGATCAAAAGCGTGAGAGATGAATTAGATATTGCAAAGCAAAATTTGGAGAAAGCAAAAGAACGAAGTGTAGTCATGGCACGATCTCTGTCTTCTCTCCAAGAAGAGCTGGAAGATACAAAGCGTAAGCTCCAAATGCTCAAAGAAAGAGAATCCATGGGAAGTTTTGAAACTGTGGATGGTTCTTGGAAATTTGATTTCAAGACGCAATCGCAGAGATTCGAAGAAGAAGAAGAAAGTGAAGCTAATTGTGAGAAGCAACATGTGAATATCGATGCACAGAATGGTCCATCTGTGAAGAAGAAGGTAAGAGACACGATGAAGAAATCATCAATATTGATGAAGGGATTTTTTTCTAAGAAAAGG MKIMEKRPYRSVKEAVELYGKRILEPDLYANVLHQMESEENEDENNLMKIKSVRDELDIAKQNLEKAKERSVVMARSLSSLQEELEDTKRKLQMLKERESMGSFETVDGSWKFDFKTQSQRFEEEEESEANCEKQHVNIDAQNGPSVKKKVRDTMKKSSILMKGFFSKKR Homology
BLAST of MS016891 vs. NCBI nr
Match: XP_022144350.1 (WEB family protein At1g75720-like [Momordica charantia]) HSP 1 Score: 308.9 bits (790), Expect = 2.7e-80 Identity = 167/170 (98.24%), Postives = 168/170 (98.82%), Query Frame = 0
BLAST of MS016891 vs. NCBI nr
Match: XP_038886273.1 (WEB family protein At1g75720-like [Benincasa hispida]) HSP 1 Score: 188.7 bits (478), Expect = 4.1e-44 Identity = 112/170 (65.88%), Postives = 133/170 (78.24%), Query Frame = 0
BLAST of MS016891 vs. NCBI nr
Match: XP_022962569.1 (WEB family protein At1g75720-like [Cucurbita moschata] >KAG7029434.1 WEB family protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 185.3 bits (469), Expect = 4.5e-43 Identity = 112/173 (64.74%), Postives = 136/173 (78.61%), Query Frame = 0
BLAST of MS016891 vs. NCBI nr
Match: XP_023546352.1 (WEB family protein At1g75720-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 183.7 bits (465), Expect = 1.3e-42 Identity = 110/173 (63.58%), Postives = 133/173 (76.88%), Query Frame = 0
BLAST of MS016891 vs. NCBI nr
Match: XP_022996992.1 (WEB family protein At1g75720-like [Cucurbita maxima]) HSP 1 Score: 182.2 bits (461), Expect = 3.8e-42 Identity = 111/173 (64.16%), Postives = 135/173 (78.03%), Query Frame = 0
BLAST of MS016891 vs. ExPASy Swiss-Prot
Match: F4I0N3 (WEB family protein At1g75720 OS=Arabidopsis thaliana OX=3702 GN=At1g75720 PE=3 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 6.1e-11 Identity = 64/182 (35.16%), Postives = 98/182 (53.85%), Query Frame = 0
BLAST of MS016891 vs. ExPASy Swiss-Prot
Match: Q9SD24 (WEB family protein At3g51220 OS=Arabidopsis thaliana OX=3702 GN=At3g51220 PE=2 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 1.7e-05 Identity = 51/167 (30.54%), Postives = 83/167 (49.70%), Query Frame = 0
BLAST of MS016891 vs. ExPASy TrEMBL
Match: A0A6J1CRD7 (WEB family protein At1g75720-like OS=Momordica charantia OX=3673 GN=LOC111014055 PE=4 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 1.3e-80 Identity = 167/170 (98.24%), Postives = 168/170 (98.82%), Query Frame = 0
BLAST of MS016891 vs. ExPASy TrEMBL
Match: A0A6J1HHG9 (WEB family protein At1g75720-like OS=Cucurbita moschata OX=3662 GN=LOC111462966 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 2.2e-43 Identity = 112/173 (64.74%), Postives = 136/173 (78.61%), Query Frame = 0
BLAST of MS016891 vs. ExPASy TrEMBL
Match: A0A6J1K3K7 (WEB family protein At1g75720-like OS=Cucurbita maxima OX=3661 GN=LOC111492056 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 1.8e-42 Identity = 111/173 (64.16%), Postives = 135/173 (78.03%), Query Frame = 0
BLAST of MS016891 vs. ExPASy TrEMBL
Match: A0A0A0LLM0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368250 PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 5.3e-42 Identity = 113/174 (64.94%), Postives = 133/174 (76.44%), Query Frame = 0
BLAST of MS016891 vs. ExPASy TrEMBL
Match: A0A1S3BB69 (WEB family protein At1g75720-like OS=Cucumis melo OX=3656 GN=LOC103488040 PE=4 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 1.0e-40 Identity = 113/176 (64.20%), Postives = 127/176 (72.16%), Query Frame = 0
BLAST of MS016891 vs. TAIR 10
Match: AT1G75720.2 (Plant protein of unknown function (DUF827) ) HSP 1 Score: 68.9 bits (167), Expect = 4.4e-12 Identity = 64/182 (35.16%), Postives = 98/182 (53.85%), Query Frame = 0
BLAST of MS016891 vs. TAIR 10
Match: AT1G75720.1 (Plant protein of unknown function (DUF827) ) HSP 1 Score: 65.5 bits (158), Expect = 4.8e-11 Identity = 65/187 (34.76%), Postives = 99/187 (52.94%), Query Frame = 0
BLAST of MS016891 vs. TAIR 10
Match: AT3G51220.1 (Plant protein of unknown function (DUF827) ) HSP 1 Score: 50.8 bits (120), Expect = 1.2e-06 Identity = 51/167 (30.54%), Postives = 83/167 (49.70%), Query Frame = 0
BLAST of MS016891 vs. TAIR 10
Match: AT2G17940.1 (Plant protein of unknown function (DUF827) ) HSP 1 Score: 42.7 bits (99), Expect = 3.3e-04 Identity = 49/184 (26.63%), Postives = 85/184 (46.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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