MS016867 (gene) Bitter gourd (TR) v1

Overview


Name	MS016867
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Zinc finger, B-box
Location	scaffold9_1: 656317 .. 657045 (-)
RNA-Seq Expression	MS016867
Synteny	MS016867

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATTCAGTGCGATGTCTGTGAAAAAGGCGATGCCTCGGTGTTCTGTACGGCGGACGAGGCGGTGCTCTGTAATCTCTGCGACCACCGCGTCCACCATGCCAATAAGCTCGCTTCGAAGCACCGGCGATTTTCCCTCCTCCGCCCATCCGCGGCGGAGGCCCCCGTCTGCGACGTCTGCCGGGTTTGGCCTAAGATCTGAGTTCTGGCTGAAATTTTGGGGGGTTTACTCTGTTTTTCCGATGTGAGTCTGATTTGATTTTTTGTTTTTGTTTTGGAATGTGATTTATTTTAGGAGCGGCGAGGTTTCTTGTTCTGTCAGCAGGACAGAGCGATTCTGTGCAGAGAGTGCGATGATCCGATTCATTCGGCCAACGAACTCACTAAGAAGCACGACAGGTTTCTTCTGACTGGTGTTAAGCTCTCCACCACTGCCGCTCTGTACACGCCGCCGCCCTCGGGCGAGAAGCCGATCGGAAGTGGTGGCCGTGGTGTTTCTGATCCCAAGTCAAAGCGTTCCGTTAAGAACCCACCAGCCGTTTCCCCTGCCCCAATAACATGCCCACCAAGTGTTCGCGTAAATGCCCCACAGAACATTCCCCCGGCGGCAGCGGTGAACAAGGGCGGCGGAGGTCTGATTCCGACCGGCGGCGGTGGCTTGGCGAGTAGCATATCGGAATATTTGATGGAGACACTCCCCGGGTGGCACTTCGAAGACTTCCTCGAT

mRNA sequence

ATGAAGATTCAGTGCGATGTCTGTGAAAAAGGCGATGCCTCGGTGTTCTGTACGGCGGACGAGGCGGTGCTCTGTAATCTCTGCGACCACCGCGTCCACCATGCCAATAAGCTCGCTTCGAAGCACCGGCGATTTTCCCTCCTCCGCCCATCCGCGGCGGAGGCCCCCGTCTGCGACGTCTGCCGGGAGCGGCGAGGTTTCTTGTTCTGTCAGCAGGACAGAGCGATTCTGTGCAGAGAGTGCGATGATCCGATTCATTCGGCCAACGAACTCACTAAGAAGCACGACAGGTTTCTTCTGACTGGTGTTAAGCTCTCCACCACTGCCGCTCTGTACACGCCGCCGCCCTCGGGCGAGAAGCCGATCGGAAGTGGTGGCCGTGGTGTTTCTGATCCCAAGTCAAAGCGTTCCGTTAAGAACCCACCAGCCGTTTCCCCTGCCCCAATAACATGCCCACCAAGTGTTCGCGTAAATGCCCCACAGAACATTCCCCCGGCGGCAGCGGTGAACAAGGGCGGCGGAGGTCTGATTCCGACCGGCGGCGGTGGCTTGGCGAGTAGCATATCGGAATATTTGATGGAGACACTCCCCGGGTGGCACTTCGAAGACTTCCTCGAT

Coding sequence (CDS)

ATGAAGATTCAGTGCGATGTCTGTGAAAAAGGCGATGCCTCGGTGTTCTGTACGGCGGACGAGGCGGTGCTCTGTAATCTCTGCGACCACCGCGTCCACCATGCCAATAAGCTCGCTTCGAAGCACCGGCGATTTTCCCTCCTCCGCCCATCCGCGGCGGAGGCCCCCGTCTGCGACGTCTGCCGGGAGCGGCGAGGTTTCTTGTTCTGTCAGCAGGACAGAGCGATTCTGTGCAGAGAGTGCGATGATCCGATTCATTCGGCCAACGAACTCACTAAGAAGCACGACAGGTTTCTTCTGACTGGTGTTAAGCTCTCCACCACTGCCGCTCTGTACACGCCGCCGCCCTCGGGCGAGAAGCCGATCGGAAGTGGTGGCCGTGGTGTTTCTGATCCCAAGTCAAAGCGTTCCGTTAAGAACCCACCAGCCGTTTCCCCTGCCCCAATAACATGCCCACCAAGTGTTCGCGTAAATGCCCCACAGAACATTCCCCCGGCGGCAGCGGTGAACAAGGGCGGCGGAGGTCTGATTCCGACCGGCGGCGGTGGCTTGGCGAGTAGCATATCGGAATATTTGATGGAGACACTCCCCGGGTGGCACTTCGAAGACTTCCTCGAT

Protein sequence

MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAEAPVCDVCRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSGEKPIGSGGRGVSDPKSKRSVKNPPAVSPAPITCPPSVRVNAPQNIPPAAAVNKGGGGLIPTGGGGLASSISEYLMETLPGWHFEDFLD

Homology

[Close]

BLAST of MS016867 vs. NCBI nr
Match: XP_022144185.1 (B-box zinc finger protein 21-like isoform X1 [Momordica charantia])

HSP 1 Score: 426.0 bits (1094), Expect = 1.8e-115
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAEAPVCDV 60
           MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAEAPVCDV
Sbjct: 1   MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAEAPVCDV 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSGEK 120
           CRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSGEK
Sbjct: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSGEK 120

Query: 121 PIGSGGRGVSDPKSKRSVKNPPAVSPAPITCPPSVRVNAPQNIPPAAAVNKGGGGLIPTG 180
           PIGSGGRGVSDPKSKRSVKNPPAVSPAPITCPPSVRVNAPQNIPPAAAVNKGGGGLIPTG
Sbjct: 121 PIGSGGRGVSDPKSKRSVKNPPAVSPAPITCPPSVRVNAPQNIPPAAAVNKGGGGLIPTG 180

Query: 181 GGGLASSISEYLMETLPGWHFEDFLD 207
           GGGLASSISEYLMETLPGWHFEDFLD
Sbjct: 181 GGGLASSISEYLMETLPGWHFEDFLD 206

[Close]

BLAST of MS016867 vs. NCBI nr
Match: XP_022144186.1 (B-box zinc finger protein 21-like isoform X2 [Momordica charantia])

HSP 1 Score: 426.0 bits (1094), Expect = 1.8e-115
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAEAPVCDV 60
           MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAEAPVCDV
Sbjct: 1   MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAEAPVCDV 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSGEK 120
           CRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSGEK
Sbjct: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSGEK 120

Query: 121 PIGSGGRGVSDPKSKRSVKNPPAVSPAPITCPPSVRVNAPQNIPPAAAVNKGGGGLIPTG 180
           PIGSGGRGVSDPKSKRSVKNPPAVSPAPITCPPSVRVNAPQNIPPAAAVNKGGGGLIPTG
Sbjct: 121 PIGSGGRGVSDPKSKRSVKNPPAVSPAPITCPPSVRVNAPQNIPPAAAVNKGGGGLIPTG 180

Query: 181 GGGLASSISEYLMETLPGWHFEDFLD 207
           GGGLASSISEYLMETLPGWHFEDFLD
Sbjct: 181 GGGLASSISEYLMETLPGWHFEDFLD 206

[Close]

BLAST of MS016867 vs. NCBI nr
Match: XP_038885493.1 (B-box zinc finger protein 20-like [Benincasa hispida])

HSP 1 Score: 364.8 bits (935), Expect = 5.0e-97
Identity = 178/206 (86.41%), Postives = 183/206 (88.83%), Query Frame = 0


Query: 1   MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAEAPVCDV 60
           MKIQCDVCEKGDA+VFCTADEA LCNLCDHRVHHANKLASKHRRFSLLRP A EAPVCDV
Sbjct: 1   MKIQCDVCEKGDAAVFCTADEAALCNLCDHRVHHANKLASKHRRFSLLRPDAGEAPVCDV 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSGEK 120
           CRERRGFLFCQQDRAILCRECDDPIHSANE T KHDRFLLTG+KLS +AALY PPPSGEK
Sbjct: 61  CRERRGFLFCQQDRAILCRECDDPIHSANEHTMKHDRFLLTGIKLSASAALYVPPPSGEK 120

Query: 121 PIGSGGRGVSDPKSKRSVKNPPAVSPAPITCPPSVRVNAPQNIPPAAAVNKGGGGLIPTG 180
           P+GSGGR VS+PKSK SVK   AVS AP  CPPSV VNAP NI PAA VNKGGGG I TG
Sbjct: 121 PVGSGGRVVSEPKSKGSVKKAAAVSKAPKICPPSVCVNAPTNITPAAVVNKGGGGQIATG 180

Query: 181 GGGLASSISEYLMETLPGWHFEDFLD 207
           G G ASSISEYLMETLPGWHFEDFLD
Sbjct: 181 GNGSASSISEYLMETLPGWHFEDFLD 206

[Close]

BLAST of MS016867 vs. NCBI nr
Match: XP_004152665.1 (B-box zinc finger protein 20 [Cucumis sativus] >KGN62650.1 hypothetical protein Csa_022601 [Cucumis sativus])

HSP 1 Score: 355.5 bits (911), Expect = 3.0e-94
Identity = 176/206 (85.44%), Postives = 180/206 (87.38%), Query Frame = 0


Query: 1   MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAEAPVCDV 60
           MKIQCDVCEKGDA VFCTADEA LCNLCDHRVHHANKLASKHRRFSLLRP A EAPVCDV
Sbjct: 1   MKIQCDVCEKGDAVVFCTADEAALCNLCDHRVHHANKLASKHRRFSLLRPDAGEAPVCDV 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSGEK 120
           C+ERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTG+KLS +AALY P PSGEK
Sbjct: 61  CKERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGIKLSASAALYAPSPSGEK 120

Query: 121 PIGSGGRGVSDPKSKRSVKNPPAVSPAPITCPPSVRVNAPQNIPPAAAVNKGGGGLIPTG 180
           PIGSGG  VS  KSK SVK   AVS AP  C P+V VNAP NI PAA VNKGGGG I TG
Sbjct: 121 PIGSGGCVVSASKSKGSVKKVAAVSKAPTICTPNVCVNAPTNITPAAVVNKGGGGQIATG 180

Query: 181 GGGLASSISEYLMETLPGWHFEDFLD 207
           GGG ASSISEYLMETLPGWHFEDFLD
Sbjct: 181 GGGSASSISEYLMETLPGWHFEDFLD 206

[Close]

BLAST of MS016867 vs. NCBI nr
Match: XP_022951058.1 (B-box zinc finger protein 20-like [Cucurbita moschata])

HSP 1 Score: 354.4 bits (908), Expect = 6.8e-94
Identity = 175/206 (84.95%), Postives = 180/206 (87.38%), Query Frame = 0


Query: 1   MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAEAPVCDV 60
           MKIQCDVCEKGDASVFCTADEA LCNLCDHRVHHANKLASKHRRFSLLR +AAEAPVCDV
Sbjct: 1   MKIQCDVCEKGDASVFCTADEAALCNLCDHRVHHANKLASKHRRFSLLRSAAAEAPVCDV 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSGEK 120
           CRERRGFLFCQQDRAILCRECDDPIHSANELT KHDRFLLTG+KLSTTAALY PPPS EK
Sbjct: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTMKHDRFLLTGIKLSTTAALYAPPPSDEK 120

Query: 121 PIGSGGRGVSDPKSKRSVKNPPAVSPAPITCPPSVRVNAPQNIPPAAAVNKGGGGLIPTG 180
           PI +G R  SD KSK SVK P  V  AP+ C  SV VNA  NIPPA A+NKGGGG IPTG
Sbjct: 121 PIKTGHRTGSDHKSKGSVKKPTVVPAAPVGCTSSVCVNASTNIPPAVAMNKGGGGQIPTG 180

Query: 181 GGGLASSISEYLMETLPGWHFEDFLD 207
           GGG ASSISEYLMETLPGWHFED LD
Sbjct: 181 GGGSASSISEYLMETLPGWHFEDLLD 206

[Close]

BLAST of MS016867 vs. ExPASy Swiss-Prot
Match: Q9LQZ7 (B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 3.4e-56
Identity = 117/208 (56.25%), Postives = 145/208 (69.71%), Query Frame = 0


Query: 1   MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAA--EAPVC 60
           MKI+CDVC+K +ASVFCTADEA LC  CDH+VHHANKLASKH RFSLL PS++   +P+C
Sbjct: 1   MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60

Query: 61  DVCRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSG 120
           D+C++++  LFCQQDRAILC++CD  IH+ANE TKKHDRFLLTGVKLS T+++Y  P S 
Sbjct: 61  DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVY-KPTSK 120

Query: 121 EKPIGSGGRGVSDPKSKRSVKNPPAVSPAPITCPPSVRVNAPQNIPPAAAVNKGGGGLIP 180
                S  +  S P S  S+ NPP +   P++ PP         I P + +N   GG   
Sbjct: 121 SSSSSSSNQDFSVPGS--SISNPPPLK-KPLSAPPQ-----SNKIQPFSKIN---GGDAS 180

Query: 181 TGGGGLASSISEYLMETLPGWHFEDFLD 207
               G  S+ISEYLM+TLPGWH EDFLD
Sbjct: 181 VNQWGSTSTISEYLMDTLPGWHVEDFLD 196

[Close]

BLAST of MS016867 vs. ExPASy Swiss-Prot
Match: Q0IGM7 (B-box zinc finger protein 20 OS=Arabidopsis thaliana OX=3702 GN=BBX20 PE=1 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.3e-47
Identity = 107/206 (51.94%), Postives = 124/206 (60.19%), Query Frame = 0


Query: 1   MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAEAPVCDV 60
           MKI C VC+K +ASVFC ADEA LCN CD  VH ANKLA KH RFSL  P+  +AP+CD+
Sbjct: 1   MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSGEK 120
           C ERR  LFCQ+DRAILCRECD PIH ANE TKKH+RFLLTGVK+S + + Y P  S   
Sbjct: 61  CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAY-PRASNSN 120

Query: 121 PIGSGGRGVSDPKSKRSVKNPPAVSPAPITCPPSVRVNAPQNIPPAAAVNKGGGGLIPTG 180
              + GR  + PKS  S     A +    +   +   N    I          G      
Sbjct: 121 SAAAFGRAKTRPKSVSSEVPSSASNEVFTSSSSTTTSNCYYGIEENYHHVSDSG-----S 180

Query: 181 GGGLASSISEYLMETLPGWHFEDFLD 207
           G G   SISEYLMETLPGW  ED L+
Sbjct: 181 GSGCTGSISEYLMETLPGWRVEDLLE 200

[Close]

BLAST of MS016867 vs. ExPASy Swiss-Prot
Match: Q96288 (B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.2e-30
Identity = 66/152 (43.42%), Postives = 94/152 (61.84%), Query Frame = 0


Query: 1   MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAEAPVCDV 60
           MKIQCDVCEK  A+V C ADEA LC  CD  +H ANKLASKH+R   L   + + P CD+
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLH-LNSLSTKFPRCDI 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSGEK 120
           C+E+  F+FC +DRA+LCR+CD+ IH AN  +  H RFL TG+K++ T+ + +      +
Sbjct: 61  CQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQ 120

Query: 121 PIGSGGRGVSDPKSKRSV----KNPPAVSPAP 149
           P  S  +  ++    +S     + P + +P P
Sbjct: 121 PEPSNNQQKANQIPAKSTSQQQQQPSSATPLP 151

[Close]

BLAST of MS016867 vs. ExPASy Swiss-Prot
Match: Q9SYM2 (B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2)

HSP 1 Score: 132.1 bits (331), Expect = 7.2e-30
Identity = 63/121 (52.07%), Postives = 80/121 (66.12%), Query Frame = 0


Query: 1   MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAEAPVCDV 60
           MKIQC+VCE  +A+V C ADEA LC  CD ++H ANKLA KH+R   L  SA+  P CD+
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVP-LSASASSIPKCDI 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSGEK 120
           C+E  GF FC QDRA+LCR+CD  IH+ N     H RFLLTG+K+    ++ T P +   
Sbjct: 61  CQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVG-LESIDTGPSTKSS 119

Query: 121 P 122
           P
Sbjct: 121 P 119

[Close]

BLAST of MS016867 vs. ExPASy Swiss-Prot
Match: O82617 (B-box zinc finger protein 23 OS=Arabidopsis thaliana OX=3702 GN=BBX23 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.5e-29
Identity = 58/111 (52.25%), Postives = 80/111 (72.07%), Query Frame = 0


Query: 1   MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAE-----A 60
           MKIQC+VCEK +A V C +DEAVLC  CD +VH ANKL  +H R +L + +A+      A
Sbjct: 1   MKIQCEVCEKAEAEVLCCSDEAVLCKPCDIKVHEANKLFQRHHRVALQKDAASATTASGA 60

Query: 61  PVCDVCRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLS 107
           P+CD+C+ER+G+ FC +DRA+LC +CD+ IH+ N     H RFLL+GV++S
Sbjct: 61  PLCDICQERKGYFFCLEDRAMLCNDCDEAIHTCN----SHQRFLLSGVQVS 107

[Close]

BLAST of MS016867 vs. ExPASy TrEMBL
Match: A0A6J1CQY0 (B-box zinc finger protein 21-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013937 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 8.8e-116
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAEAPVCDV 60
           MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAEAPVCDV
Sbjct: 1   MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAEAPVCDV 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSGEK 120
           CRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSGEK
Sbjct: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSGEK 120

Query: 121 PIGSGGRGVSDPKSKRSVKNPPAVSPAPITCPPSVRVNAPQNIPPAAAVNKGGGGLIPTG 180
           PIGSGGRGVSDPKSKRSVKNPPAVSPAPITCPPSVRVNAPQNIPPAAAVNKGGGGLIPTG
Sbjct: 121 PIGSGGRGVSDPKSKRSVKNPPAVSPAPITCPPSVRVNAPQNIPPAAAVNKGGGGLIPTG 180

Query: 181 GGGLASSISEYLMETLPGWHFEDFLD 207
           GGGLASSISEYLMETLPGWHFEDFLD
Sbjct: 181 GGGLASSISEYLMETLPGWHFEDFLD 206

[Close]

BLAST of MS016867 vs. ExPASy TrEMBL
Match: A0A6J1CSK3 (B-box zinc finger protein 21-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013937 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 8.8e-116
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAEAPVCDV 60
           MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAEAPVCDV
Sbjct: 1   MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAEAPVCDV 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSGEK 120
           CRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSGEK
Sbjct: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSGEK 120

Query: 121 PIGSGGRGVSDPKSKRSVKNPPAVSPAPITCPPSVRVNAPQNIPPAAAVNKGGGGLIPTG 180
           PIGSGGRGVSDPKSKRSVKNPPAVSPAPITCPPSVRVNAPQNIPPAAAVNKGGGGLIPTG
Sbjct: 121 PIGSGGRGVSDPKSKRSVKNPPAVSPAPITCPPSVRVNAPQNIPPAAAVNKGGGGLIPTG 180

Query: 181 GGGLASSISEYLMETLPGWHFEDFLD 207
           GGGLASSISEYLMETLPGWHFEDFLD
Sbjct: 181 GGGLASSISEYLMETLPGWHFEDFLD 206

[Close]

BLAST of MS016867 vs. ExPASy TrEMBL
Match: A0A0A0LL53 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G365080 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.5e-94
Identity = 176/206 (85.44%), Postives = 180/206 (87.38%), Query Frame = 0


Query: 1   MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAEAPVCDV 60
           MKIQCDVCEKGDA VFCTADEA LCNLCDHRVHHANKLASKHRRFSLLRP A EAPVCDV
Sbjct: 1   MKIQCDVCEKGDAVVFCTADEAALCNLCDHRVHHANKLASKHRRFSLLRPDAGEAPVCDV 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSGEK 120
           C+ERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTG+KLS +AALY P PSGEK
Sbjct: 61  CKERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGIKLSASAALYAPSPSGEK 120

Query: 121 PIGSGGRGVSDPKSKRSVKNPPAVSPAPITCPPSVRVNAPQNIPPAAAVNKGGGGLIPTG 180
           PIGSGG  VS  KSK SVK   AVS AP  C P+V VNAP NI PAA VNKGGGG I TG
Sbjct: 121 PIGSGGCVVSASKSKGSVKKVAAVSKAPTICTPNVCVNAPTNITPAAVVNKGGGGQIATG 180

Query: 181 GGGLASSISEYLMETLPGWHFEDFLD 207
           GGG ASSISEYLMETLPGWHFEDFLD
Sbjct: 181 GGGSASSISEYLMETLPGWHFEDFLD 206

[Close]

BLAST of MS016867 vs. ExPASy TrEMBL
Match: A0A6J1KQG9 (B-box zinc finger protein 21-like OS=Cucurbita maxima OX=3661 GN=LOC111496282 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.3e-94
Identity = 175/206 (84.95%), Postives = 180/206 (87.38%), Query Frame = 0


Query: 1   MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAEAPVCDV 60
           MKIQCDVCEKGDASVFCTADEA LCNLCDHRVHHANKLASKHRRFSLLR +AAEAPVCDV
Sbjct: 1   MKIQCDVCEKGDASVFCTADEAALCNLCDHRVHHANKLASKHRRFSLLRSAAAEAPVCDV 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSGEK 120
           CRERRGFLFCQQDRAILCRECDDPIHSANELT KHDRFLLTG+KLSTTAALY PPPS EK
Sbjct: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTMKHDRFLLTGIKLSTTAALYAPPPSDEK 120

Query: 121 PIGSGGRGVSDPKSKRSVKNPPAVSPAPITCPPSVRVNAPQNIPPAAAVNKGGGGLIPTG 180
           PI +G R  SD KSK SVK P  V  AP+ C  SV VNA  NIPPA A+NKGGGG IPTG
Sbjct: 121 PIKTGHRTGSDHKSKGSVKKPTVVPAAPVGCTSSVCVNASTNIPPAVAMNKGGGGQIPTG 180

Query: 181 GGGLASSISEYLMETLPGWHFEDFLD 207
           GGG ASSISEYLMETLPGWHFED LD
Sbjct: 181 GGGSASSISEYLMETLPGWHFEDLLD 206

[Close]

BLAST of MS016867 vs. ExPASy TrEMBL
Match: A0A6J1GGM7 (B-box zinc finger protein 20-like OS=Cucurbita moschata OX=3662 GN=LOC111454020 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.3e-94
Identity = 175/206 (84.95%), Postives = 180/206 (87.38%), Query Frame = 0


Query: 1   MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAEAPVCDV 60
           MKIQCDVCEKGDASVFCTADEA LCNLCDHRVHHANKLASKHRRFSLLR +AAEAPVCDV
Sbjct: 1   MKIQCDVCEKGDASVFCTADEAALCNLCDHRVHHANKLASKHRRFSLLRSAAAEAPVCDV 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSGEK 120
           CRERRGFLFCQQDRAILCRECDDPIHSANELT KHDRFLLTG+KLSTTAALY PPPS EK
Sbjct: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTMKHDRFLLTGIKLSTTAALYAPPPSDEK 120

Query: 121 PIGSGGRGVSDPKSKRSVKNPPAVSPAPITCPPSVRVNAPQNIPPAAAVNKGGGGLIPTG 180
           PI +G R  SD KSK SVK P  V  AP+ C  SV VNA  NIPPA A+NKGGGG IPTG
Sbjct: 121 PIKTGHRTGSDHKSKGSVKKPTVVPAAPVGCTSSVCVNASTNIPPAVAMNKGGGGQIPTG 180

Query: 181 GGGLASSISEYLMETLPGWHFEDFLD 207
           GGG ASSISEYLMETLPGWHFED LD
Sbjct: 181 GGGSASSISEYLMETLPGWHFEDLLD 206

[Close]

BLAST of MS016867 vs. TAIR 10
Match: AT1G75540.1 (salt tolerance homolog2 )

HSP 1 Score: 219.5 bits (558), Expect = 2.4e-57
Identity = 117/208 (56.25%), Postives = 145/208 (69.71%), Query Frame = 0


Query: 1   MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAA--EAPVC 60
           MKI+CDVC+K +ASVFCTADEA LC  CDH+VHHANKLASKH RFSLL PS++   +P+C
Sbjct: 1   MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60

Query: 61  DVCRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSG 120
           D+C++++  LFCQQDRAILC++CD  IH+ANE TKKHDRFLLTGVKLS T+++Y  P S 
Sbjct: 61  DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVY-KPTSK 120

Query: 121 EKPIGSGGRGVSDPKSKRSVKNPPAVSPAPITCPPSVRVNAPQNIPPAAAVNKGGGGLIP 180
                S  +  S P S  S+ NPP +   P++ PP         I P + +N   GG   
Sbjct: 121 SSSSSSSNQDFSVPGS--SISNPPPLK-KPLSAPPQ-----SNKIQPFSKIN---GGDAS 180

Query: 181 TGGGGLASSISEYLMETLPGWHFEDFLD 207
               G  S+ISEYLM+TLPGWH EDFLD
Sbjct: 181 VNQWGSTSTISEYLMDTLPGWHVEDFLD 196

[Close]

BLAST of MS016867 vs. TAIR 10
Match: AT4G39070.1 (B-box zinc finger family protein )

HSP 1 Score: 191.0 bits (484), Expect = 9.2e-49
Identity = 107/206 (51.94%), Postives = 124/206 (60.19%), Query Frame = 0


Query: 1   MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAEAPVCDV 60
           MKI C VC+K +ASVFC ADEA LCN CD  VH ANKLA KH RFSL  P+  +AP+CD+
Sbjct: 1   MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSGEK 120
           C ERR  LFCQ+DRAILCRECD PIH ANE TKKH+RFLLTGVK+S + + Y P  S   
Sbjct: 61  CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAY-PRASNSN 120

Query: 121 PIGSGGRGVSDPKSKRSVKNPPAVSPAPITCPPSVRVNAPQNIPPAAAVNKGGGGLIPTG 180
              + GR  + PKS  S     A +    +   +   N    I          G      
Sbjct: 121 SAAAFGRAKTRPKSVSSEVPSSASNEVFTSSSSTTTSNCYYGIEENYHHVSDSG-----S 180

Query: 181 GGGLASSISEYLMETLPGWHFEDFLD 207
           G G   SISEYLMETLPGW  ED L+
Sbjct: 181 GSGCTGSISEYLMETLPGWRVEDLLE 200

[Close]

BLAST of MS016867 vs. TAIR 10
Match: AT1G06040.2 (B-box zinc finger family protein )

HSP 1 Score: 132.9 bits (333), Expect = 3.0e-31
Identity = 66/152 (43.42%), Postives = 94/152 (61.84%), Query Frame = 0


Query: 1   MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAEAPVCDV 60
           MKIQCDVCEK  A+V C ADEA LC  CD  +H ANKLASKH+R   L   + + P CD+
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLH-LNSLSTKFPRCDI 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSGEK 120
           C+E+  F+FC +DRA+LCR+CD+ IH AN  +  H RFL TG+K++ T+ + +      +
Sbjct: 61  CQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQ 120

Query: 121 PIGSGGRGVSDPKSKRSV----KNPPAVSPAP 149
           P  S  +  ++    +S     + P + +P P
Sbjct: 121 PEPSNNQQKANQIPAKSTSQQQQQPSSATPLP 151

[Close]

BLAST of MS016867 vs. TAIR 10
Match: AT1G06040.1 (B-box zinc finger family protein )

HSP 1 Score: 132.9 bits (333), Expect = 3.0e-31
Identity = 66/152 (43.42%), Postives = 94/152 (61.84%), Query Frame = 0


Query: 1   MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAEAPVCDV 60
           MKIQCDVCEK  A+V C ADEA LC  CD  +H ANKLASKH+R   L   + + P CD+
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLH-LNSLSTKFPRCDI 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSGEK 120
           C+E+  F+FC +DRA+LCR+CD+ IH AN  +  H RFL TG+K++ T+ + +      +
Sbjct: 61  CQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQ 120

Query: 121 PIGSGGRGVSDPKSKRSV----KNPPAVSPAP 149
           P  S  +  ++    +S     + P + +P P
Sbjct: 121 PEPSNNQQKANQIPAKSTSQQQQQPSSATPLP 151

[Close]

BLAST of MS016867 vs. TAIR 10
Match: AT1G78600.1 (light-regulated zinc finger protein 1 )

HSP 1 Score: 132.1 bits (331), Expect = 5.1e-31
Identity = 63/121 (52.07%), Postives = 80/121 (66.12%), Query Frame = 0


Query: 1   MKIQCDVCEKGDASVFCTADEAVLCNLCDHRVHHANKLASKHRRFSLLRPSAAEAPVCDV 60
           MKIQC+VCE  +A+V C ADEA LC  CD ++H ANKLA KH+R   L  SA+  P CD+
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVP-LSASASSIPKCDI 60

Query: 61  CRERRGFLFCQQDRAILCRECDDPIHSANELTKKHDRFLLTGVKLSTTAALYTPPPSGEK 120
           C+E  GF FC QDRA+LCR+CD  IH+ N     H RFLLTG+K+    ++ T P +   
Sbjct: 61  CQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVG-LESIDTGPSTKSS 119

Query: 121 P 122
           P
Sbjct: 121 P 119

The following BLAST results are available for this feature:

BLAST of MS016867 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144185.1	1.8e-115	100.00	B-box zinc finger protein 21-like isoform X1 [Momordica charantia]	[more]
XP_022144186.1	1.8e-115	100.00	B-box zinc finger protein 21-like isoform X2 [Momordica charantia]	[more]
XP_038885493.1	5.0e-97	86.41	B-box zinc finger protein 20-like [Benincasa hispida]	[more]
XP_004152665.1	3.0e-94	85.44	B-box zinc finger protein 20 [Cucumis sativus] >KGN62650.1 hypothetical protein ...	[more]
XP_022951058.1	6.8e-94	84.95	B-box zinc finger protein 20-like [Cucurbita moschata]	[more]

BLAST of MS016867 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQZ7	3.4e-56	56.25	B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1	[more]
Q0IGM7	1.3e-47	51.94	B-box zinc finger protein 20 OS=Arabidopsis thaliana OX=3702 GN=BBX20 PE=1 SV=1	[more]
Q96288	4.2e-30	43.42	B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1	[more]
Q9SYM2	7.2e-30	52.07	B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2	[more]
O82617	3.5e-29	52.25	B-box zinc finger protein 23 OS=Arabidopsis thaliana OX=3702 GN=BBX23 PE=1 SV=1	[more]

BLAST of MS016867 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQY0	8.8e-116	100.00	B-box zinc finger protein 21-like isoform X1 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1CSK3	8.8e-116	100.00	B-box zinc finger protein 21-like isoform X2 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A0A0LL53	1.5e-94	85.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G365080 PE=4 SV=1	[more]
A0A6J1KQG9	3.3e-94	84.95	B-box zinc finger protein 21-like OS=Cucurbita maxima OX=3661 GN=LOC111496282 PE...	[more]
A0A6J1GGM7	3.3e-94	84.95	B-box zinc finger protein 20-like OS=Cucurbita moschata OX=3662 GN=LOC111454020 ...	[more]

BLAST of MS016867 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75540.1	2.4e-57	56.25	salt tolerance homolog2	[more]
AT4G39070.1	9.2e-49	51.94	B-box zinc finger family protein	[more]
AT1G06040.2	3.0e-31	43.42	B-box zinc finger family protein	[more]
AT1G06040.1	3.0e-31	43.42	B-box zinc finger family protein	[more]
AT1G78600.1	5.1e-31	52.07	light-regulated zinc finger protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 53..100 e-value: 1.4E-14 score: 64.4 coord: 4..47 e-value: 4.9E-6 score: 36.1
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 54..96 e-value: 7.6E-6 score: 26.0 coord: 4..43 e-value: 3.9E-5 score: 23.7
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 53..100 score: 9.93996
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 1..47 score: 10.466262
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 1..96 e-value: 5.7E-10 score: 41.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..153
None	No IPR available	PANTHER	PTHR31832:SF18	B-BOX ZINC FINGER PROTEIN 21	coord: 1..206
None	No IPR available	PANTHER	PTHR31832	B-BOX ZINC FINGER PROTEIN 22	coord: 1..206
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 57..100 e-value: 7.88448E-16 score: 66.5523
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 5..47 e-value: 1.23017E-14 score: 63.4707

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS016867.1	MS016867.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding