MS016841 (gene) Bitter gourd (TR) v1

Overview


Name	MS016841
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Proteasome subunit alpha type
Location	scaffold9_1: 380588 .. 383902 (-)
RNA-Seq Expression	MS016841
Synteny	MS016841

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTAGGAATCAGTACGACACGGACGTCACCACATGGAGCCCCGCCGGAAGGCTGTTTCAGGTGGAGTACGCGATGGAGGCGGTGAAGCAAGGCTCTGCGGCCATTGGCCTCCGATCCAAGACCCACGTGGTTCTAGCCTGCGTCAATAAGGCCAACTCCGAGCTATCCTCGCACCAGAAGAAGATCTTCAAAGTCGATGATCACATCGGCGTCGCCATTTCCGGCCTTACTGCTGATGGACGCGTTCTTTCCCGCTATATGAGATCTGAGTGTATCAATTACAGCTACACCTATGAATCCCCGCTTCCCGTCGGTCGTCTTGTAGTTCAACTGGCCGATAAGGCTCAGGTTCGTGAATGATGCCCTCATTCTGTTCACAATTTGCTGCTGCTTTGAATTTCTTACGCATTTGTTTGATTTTAGCTGTCTGTGCCGTGGGTTTGCATATGCTTGAATTTGTTTGGTTAGTGGCGGGACTTACGAATTGTTGCTGCCTGACAATTGAAGGGAAACTTTTTTTATTTATTAAGCTCTCTAACATGCGGAGTATCCTTAGTCAGTAACCGAGATTAGGGAACATTTGGCTTGGGGAATGGCACAAGGTCTATGCGTCTTCTTATTTACAGCATTTCGAGCTTTAAATCTAGCCAAAGATTATAGCCTTTATGTCTGTTACTTATCCTATGTTGTTGTATTTGTTAGGTTTATTCTTAACCGTACAGTGGTAGACACGGACTAGGACTTTAAGATCTTTGATTCGTGCGTTTATTTTAATTGTTGAATTAGTTAAAACCCACCTAGCGTTGCTGGTAGTTTGTTCTTTATAAATTATTTCTGCTTAATGGTTTAGGTTTTAGTAGAATCTGGTAACTAGAGAAATTATTCTGACACAATGTGGCTATCACCAATGCACATATATGTCATATGTGATTGATGGACTTAAGAGTTGTGGACAAGAATTATATGCAGCTGGATAATTGAGGCCATGGTTGCATATTAGGGTTCAACTTTTGGAAAGTTCTCACATATTTTCCTTGCACTGTCACTGTCTTCGATCAATAATCTTAAGGGTCCTCAAAGTTTGAGGAATCGGGTTTAATAATTAATATGTGATGGGATGTTGAGAGGCACGAGGATGAAGCATTTTCTGCCTTCAAATTTAAGCTGGAGAAAATTGCAGTTCTAGAATTTTGTTGCACTGTGGTAGCGTTGTGTTGAATTTGGTTTTAGTAGATCCTTTGTAGCGTTAGATTCTGCTTCAAGTTCTTTGGTCTAACTTGAATTAAAAAAAAAAAAAAAAAATTGTTTTTTATTTTATTTGACCTTTTTTTTTTCCTCTTTTGCTATTCATTTTTACCGGCTCACTCCTAGCTTTGCTAGCAATATAGGGAATAAAATTTTGGTATTTATACCAAAATGCTCGTATTATAGCATAGAAAAAAAATTAATCTTGAATAAACCTTGCTTGCTGTATTTATCTCCATCTTTTTTGATTTTACAAGAGACCATGTATTCAAAACAAGAGTAAAGAAAAAAGTCAAAACAATGTAGATGCTAGAGGCTAGAGGCAAAGAGTAGAGGCCTTGCAAACTAGGTCGATGTAAAATACTGTGTAGTTACCAGACAAATTTATGTGAAGGGCACTCTTAACTAGAGGCTGTATGAATAAAATCACAAAATTTATTATTATTATTTTTTTTTTTGGGTTAAGAAACTTATAAAAAGACCTTCCAGGACATTGTTGAGACTATAGTTAGTAAAAGGGAGATAAAAACATTTACACTAACCAAAGCTGTGACTGGAACATTATCAAAGAGATAGACGTTGTTGAATATCCTGTTGTTCCTTTCTAGATAAATTTTCTGGACGAAAGCCCGATTAGTCATACCCATACGATTCCAGCTTCCTTCTTGAACAGGTGACCCACCAAGAGCGCTTGAAGAAAAAGCTTTAATTGAACTTGTACTCATATGGATGGAGTTTTCTTTGTCATGAAAGACTATAGTTTCTTTCTAACCAGATGAGCCACAAAAAAACTCTGATGGCACACCTCCAAATGGCTCTTGCTTTTCCTTTCAGCCACCAGTTGGAAAGAGCGTCAAGGAACCAATCTTCAATGCATTTGGGAAGGCAAACTGAGAAATGATTTTATCCCCCCTTCGACCCCTACTTTTTTTCTGCATTAAGTTAGGTTGCATCAACCTATATGGATCGAAGCCTCAAAGGGGAGATTATAATATCAAACTTCCTCATGGCCTTGCTATTCGGCACCTGATGTAGGTTACTTGATGTTGGTTATCCTATCATGATCTCTGTGGACCACCATTTCGATTCACCCTGTTCTTTCTCTGTGGAGACAGATTTCAACTGCTTTGTGCAACTGCTTTTGATAACTCGGTGGTGAATTCCTTCCCACAATAATATTTTGAAGTATTCAGGATATACCTAATGTTGTTGTATTGGATGTAATTGTTGGTGTCATTAATACTTGCTCGAATCATCTAGATGTCTGTCCCTAGACTATAGGATCCACTCCAGACAGGTAATTAACAACTTCAAAAGCCATGCCTTCTTGGCCTGGTGTAATACTGGGTTTCTAATATTTTCCTTGACTAGAAAGTTTATCCATATTTGCTAGGAGGGGCAAAAACCACAGACATTAGGTATGGTGAAATAGGAATAACACTAGGTACTTTACTGAGGTATTATCTCTTATTTGTATTTCCAGGGTTCCAGGCATGGTTGTTTTAATAGGGAAGACCAATTTCACACGTTCATAAACTTATGCCTTTCTCTAATTATCTTGGCCACTGGTTGCAGGTCTGCACCCAGCGCTCGTGGAAACGGCCATATGGAGTCGGTCTGCTGGTAGGTGGTCTGGATGAGTCTGGCGCTCACCTTTATTACAACTGCCCAAGTGGGAACTACTTCGAATATCAAGCTTTTGCCATAGGATCCCGTTCACAGGCTGCCAAGACATACTTGGAACGGAGATTTGATAACTTCAAGGACTCATCTAGAGACGACTTGATCAAAGATGCACTGATCGCTACCAGAGAAACCTTGCAAGGAGAAAAACTGACTTCCTCCATATGCACGGTTGCGATCTTAGGAGTTGGGGAGCCTTTCCATATATTGGATAGGGAAACTGTTCAGAAGTTGATTGATGAGTTTGAGATTGTTAAGGAGGATGATGTTCCTGCTGCGGATCAGGATGTTGCTGCCGAGCAGGGTGATTCTGCCGCCCCTGAACAAGCTGCAGGGACAGACCAAGGCAGTGCCCCAGATCAAGGCGTGGCCCCGATGGATATC

mRNA sequence

ATGTTTAGGAATCAGTACGACACGGACGTCACCACATGGAGCCCCGCCGGAAGGCTGTTTCAGGTGGAGTACGCGATGGAGGCGGTGAAGCAAGGCTCTGCGGCCATTGGCCTCCGATCCAAGACCCACGTGGTTCTAGCCTGCGTCAATAAGGCCAACTCCGAGCTATCCTCGCACCAGAAGAAGATCTTCAAAGTCGATGATCACATCGGCGTCGCCATTTCCGGCCTTACTGCTGATGGACGCGTTCTTTCCCGCTATATGAGATCTGAGTGTATCAATTACAGCTACACCTATGAATCCCCGCTTCCCGTCGGTCGTCTTGTAGTTCAACTGGCCGATAAGGCTCAGGTCTGCACCCAGCGCTCGTGGAAACGGCCATATGGAGTCGGTCTGCTGGTAGGTGGTCTGGATGAGTCTGGCGCTCACCTTTATTACAACTGCCCAAGTGGGAACTACTTCGAATATCAAGCTTTTGCCATAGGATCCCGTTCACAGGCTGCCAAGACATACTTGGAACGGAGATTTGATAACTTCAAGGACTCATCTAGAGACGACTTGATCAAAGATGCACTGATCGCTACCAGAGAAACCTTGCAAGGAGAAAAACTGACTTCCTCCATATGCACGGTTGCGATCTTAGGAGTTGGGGAGCCTTTCCATATATTGGATAGGGAAACTGTTCAGAAGTTGATTGATGAGTTTGAGATTGTTAAGGAGGATGATGTTCCTGCTGCGGATCAGGATGTTGCTGCCGAGCAGGGTGATTCTGCCGCCCCTGAACAAGCTGCAGGGACAGACCAAGGCAGTGCCCCAGATCAAGGCGTGGCCCCGATGGATATC

Coding sequence (CDS)

ATGTTTAGGAATCAGTACGACACGGACGTCACCACATGGAGCCCCGCCGGAAGGCTGTTTCAGGTGGAGTACGCGATGGAGGCGGTGAAGCAAGGCTCTGCGGCCATTGGCCTCCGATCCAAGACCCACGTGGTTCTAGCCTGCGTCAATAAGGCCAACTCCGAGCTATCCTCGCACCAGAAGAAGATCTTCAAAGTCGATGATCACATCGGCGTCGCCATTTCCGGCCTTACTGCTGATGGACGCGTTCTTTCCCGCTATATGAGATCTGAGTGTATCAATTACAGCTACACCTATGAATCCCCGCTTCCCGTCGGTCGTCTTGTAGTTCAACTGGCCGATAAGGCTCAGGTCTGCACCCAGCGCTCGTGGAAACGGCCATATGGAGTCGGTCTGCTGGTAGGTGGTCTGGATGAGTCTGGCGCTCACCTTTATTACAACTGCCCAAGTGGGAACTACTTCGAATATCAAGCTTTTGCCATAGGATCCCGTTCACAGGCTGCCAAGACATACTTGGAACGGAGATTTGATAACTTCAAGGACTCATCTAGAGACGACTTGATCAAAGATGCACTGATCGCTACCAGAGAAACCTTGCAAGGAGAAAAACTGACTTCCTCCATATGCACGGTTGCGATCTTAGGAGTTGGGGAGCCTTTCCATATATTGGATAGGGAAACTGTTCAGAAGTTGATTGATGAGTTTGAGATTGTTAAGGAGGATGATGTTCCTGCTGCGGATCAGGATGTTGCTGCCGAGCAGGGTGATTCTGCCGCCCCTGAACAAGCTGCAGGGACAGACCAAGGCAGTGCCCCAGATCAAGGCGTGGCCCCGATGGATATC

Protein sequence

MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQKKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFDNFKDSSRDDLIKDALIATRETLQGEKLTSSICTVAILGVGEPFHILDRETVQKLIDEFEIVKEDDVPAADQDVAAEQGDSAAPEQAAGTDQGSAPDQGVAPMDI

Homology

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BLAST of MS016841 vs. NCBI nr
Match: XP_022144277.1 (proteasome subunit alpha type-1-B [Momordica charantia])

HSP 1 Score: 554.7 bits (1428), Expect = 4.6e-154
Identity = 280/281 (99.64%), Postives = 281/281 (100.00%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFDNFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFDNFK
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFDNFK 180

Query: 181 DSSRDDLIKDALIATRETLQGEKLTSSICTVAILGVGEPFHILDRETVQKLIDEFEIVKE 240
           DSSRD+LIKDALIATRETLQGEKLTSSICTVAILGVGEPFHILDRETVQKLIDEFEIVKE
Sbjct: 181 DSSRDNLIKDALIATRETLQGEKLTSSICTVAILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDVPAADQDVAAEQGDSAAPEQAAGTDQGSAPDQGVAPMDI 282
           DDVPAADQDVAAEQGDSAAPEQAAGTDQGSAPDQGVAPMDI
Sbjct: 241 DDVPAADQDVAAEQGDSAAPEQAAGTDQGSAPDQGVAPMDI 281

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BLAST of MS016841 vs. NCBI nr
Match: XP_023546840.1 (proteasome subunit alpha type-1-B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 546.6 bits (1407), Expect = 1.3e-151
Identity = 274/281 (97.51%), Postives = 279/281 (99.29%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFDNFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF+NFK
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALIATRETLQGEKLTSSICTVAILGVGEPFHILDRETVQKLIDEFEIVKE 240
           DSSRDDLIKDAL+ATRETLQGEKLTSSICT++ILGVGEPFHILDRETVQ+LIDEFEIVKE
Sbjct: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQQLIDEFEIVKE 240

Query: 241 DDVPAADQDVAAEQGDSAAPEQAAGTDQGSAPDQGVAPMDI 282
           DDVPAADQDVA EQGDSAAPE AAGTDQGSAPDQGVAPMDI
Sbjct: 241 DDVPAADQDVAPEQGDSAAPEPAAGTDQGSAPDQGVAPMDI 281

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BLAST of MS016841 vs. NCBI nr
Match: XP_008444739.1 (PREDICTED: proteasome subunit alpha type-1-B-like [Cucumis melo] >KAA0065218.1 proteasome subunit alpha type-1-B-like [Cucumis melo var. makuwa])

HSP 1 Score: 546.6 bits (1407), Expect = 1.3e-151
Identity = 274/281 (97.51%), Postives = 278/281 (98.93%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRS THVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFDNFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF+NFK
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALIATRETLQGEKLTSSICTVAILGVGEPFHILDRETVQKLIDEFEIVKE 240
           DSSRD+LIKDALIATRETLQGEKLTSSICT+AILGVGEPFHILDRETVQKLIDEFEIVKE
Sbjct: 181 DSSRDELIKDALIATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDVPAADQDVAAEQGDSAAPEQAAGTDQGSAPDQGVAPMDI 282
           DDVPAADQD+A EQGDSAAPE AAGTDQGSAPDQGVAPMDI
Sbjct: 241 DDVPAADQDIAPEQGDSAAPEPAAGTDQGSAPDQGVAPMDI 281

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BLAST of MS016841 vs. NCBI nr
Match: XP_038886220.1 (proteasome subunit alpha type-1-B-like [Benincasa hispida])

HSP 1 Score: 545.4 bits (1404), Expect = 2.8e-151
Identity = 272/281 (96.80%), Postives = 278/281 (98.93%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFDNFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF+NFK
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALIATRETLQGEKLTSSICTVAILGVGEPFHILDRETVQKLIDEFEIVKE 240
           DSSRD+LIKDALIATRETLQGEKLTSSICT+AILGVGEPFHILDRETVQKLIDEFEIVK+
Sbjct: 181 DSSRDELIKDALIATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQKLIDEFEIVKD 240

Query: 241 DDVPAADQDVAAEQGDSAAPEQAAGTDQGSAPDQGVAPMDI 282
           DD+PAADQD+A EQGDSA PE AAGTDQGSAPDQGVAPMDI
Sbjct: 241 DDIPAADQDIAPEQGDSAVPEAAAGTDQGSAPDQGVAPMDI 281

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BLAST of MS016841 vs. NCBI nr
Match: XP_004152689.1 (proteasome subunit alpha type-1-B [Cucumis sativus] >KGN62618.1 hypothetical protein Csa_022520 [Cucumis sativus])

HSP 1 Score: 545.0 bits (1403), Expect = 3.7e-151
Identity = 273/281 (97.15%), Postives = 277/281 (98.58%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRS THVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFDNFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF+NFK
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALIATRETLQGEKLTSSICTVAILGVGEPFHILDRETVQKLIDEFEIVKE 240
           DSSRD+LIKDALIATRETLQGEKLTSSICT+AILGVGEPFHILDRETVQKLIDEFEIVKE
Sbjct: 181 DSSRDELIKDALIATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDVPAADQDVAAEQGDSAAPEQAAGTDQGSAPDQGVAPMDI 282
           DDVPA DQD+A EQGDSAAPE AAGTDQGSAPDQGVAPMDI
Sbjct: 241 DDVPAVDQDIAPEQGDSAAPEPAAGTDQGSAPDQGVAPMDI 281

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BLAST of MS016841 vs. ExPASy Swiss-Prot
Match: O23712 (Proteasome subunit alpha type-1-B OS=Arabidopsis thaliana OX=3702 GN=PAF2 PE=1 SV=2)

HSP 1 Score: 442.2 bits (1136), Expect = 4.4e-123
Identity = 221/281 (78.65%), Postives = 250/281 (88.97%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSP GRLFQVEYAMEAVKQGSAAIGLRS++HVVLACVNKA SELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           +KIFKVDDHIGVAI+GLTADGRVLSRYMRSE IN+S+TYESPLPVGRLVV LADKAQVCT
Sbjct: 61  RKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFDNFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLER+F++F+
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFESFQ 180

Query: 181 DSSRDDLIKDALIATRETLQGEKLTSSICTVAILGVGEPFHILDRETVQKLIDEFEIVKE 240
           +SS++DLIKDA++A RETLQGE L SS+CTV++LGV EPFH LD+E++QK+ID FE V E
Sbjct: 181 ESSKEDLIKDAIMAIRETLQGETLKSSLCTVSVLGVDEPFHFLDQESIQKVIDTFEKVPE 240

Query: 241 DDVPAADQDVAAEQGDSAAPEQAAGTDQGSAPDQGVAPMDI 282
           ++  A + +   E    AAP  A   +QG + DQ VAPM+I
Sbjct: 241 EEEDAGEGEAEPE----AAPGAAGTGEQGGSGDQDVAPMEI 277

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BLAST of MS016841 vs. ExPASy Swiss-Prot
Match: P34066 (Proteasome subunit alpha type-1-A OS=Arabidopsis thaliana OX=3702 GN=PAF1 PE=1 SV=3)

HSP 1 Score: 441.0 bits (1133), Expect = 9.8e-123
Identity = 223/281 (79.36%), Postives = 245/281 (87.19%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSP GRLFQVEYAMEAVKQGSAAIGLRS++HVVLACVNKA SELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           +KIFKVDDHIGVAI+GLTADGRVLSRYMRSE IN+S+TYESPLPVGRLVV LADKAQVCT
Sbjct: 61  RKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFDNFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF++F 
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFESFG 180

Query: 181 DSSRDDLIKDALIATRETLQGEKLTSSICTVAILGVGEPFHILDRETVQKLIDEFEIVKE 240
           DSSR+DLIKDA++A RETLQGE L SS+CTVAILGV EPFH LD+E +QK+ID FE V E
Sbjct: 181 DSSREDLIKDAILAVRETLQGETLKSSLCTVAILGVDEPFHFLDQEAIQKVIDTFEKVPE 240

Query: 241 DDVPAADQDVAAEQGDSAAPEQAAGTDQGSAPDQGVAPMDI 282
           ++    +      +   AAP +  G   G A DQ VAPM++
Sbjct: 241 EEEGEGEAGEGEAEAAEAAPAERGG---GVAGDQDVAPMEM 278

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BLAST of MS016841 vs. ExPASy Swiss-Prot
Match: P52428 (Proteasome subunit alpha type-1 OS=Oryza sativa subsp. japonica OX=39947 GN=PAF1 PE=2 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 3.2e-105
Identity = 196/286 (68.53%), Postives = 229/286 (80.07%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSA +GLRS+TH VLA  NKA SELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSACVGLRSRTHAVLAAANKAASELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           +K+F+V DH GVA++GLTADGRVLSR++RSECIN+++ Y++PLPV RL ++LADKAQVCT
Sbjct: 61  RKVFRVADHAGVALAGLTADGRVLSRFLRSECINHAFVYDAPLPVSRLALRLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFDNFK 180
           QRSWKRPYGVGLLV GLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKT+LERRF+ + 
Sbjct: 121 QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLERRFEGYN 180

Query: 181 DSSRDDLIKDALIATRETLQGEKLTSSICTVAIL-----GVGEPFHILDRETVQKLIDEF 240
           D + + LIKDAL A +ETLQGEKLTSS CTVAI+     G  EPF ++D + +Q++ID  
Sbjct: 181 DYTPEQLIKDALSAIKETLQGEKLTSSNCTVAIVGRKDDGTVEPFEMIDVKRIQEIIDSM 240

Query: 241 EIVKEDDVPAADQDVAAEQGDSAAPEQAAGTDQGSAPDQGVAPMDI 282
           E        AA++  AAE   S+  E+  GTD         APMDI
Sbjct: 241 E--------AAEEAPAAEAESSSMQEEDKGTD--------AAPMDI 270

[Close]

BLAST of MS016841 vs. ExPASy Swiss-Prot
Match: Q27562 (Proteasome subunit alpha type-1 OS=Dictyostelium discoideum OX=44689 GN=psmA1 PE=3 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.6e-72
Identity = 130/238 (54.62%), Postives = 179/238 (75.21%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           M+RNQYD+D+TT+SP+GR+ Q+EYAMEAVKQG AA+ L+SK   VL  + +++SEL S+Q
Sbjct: 1   MYRNQYDSDITTFSPSGRIHQIEYAMEAVKQGGAAVALKSKQFAVLVSLKRSSSELGSYQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIF VDDH+G+AISGLTAD R+L  YMR+EC NY+Y YES + V RLV ++ADK QV T
Sbjct: 61  KKIFVVDDHVGIAISGLTADARMLCNYMRNECSNYNYVYESQMRVERLVTKVADKHQVHT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFDNFK 180
           QR  +RPYGVGLLV G D+ GAH+Y  CPSGN+++Y++ +IGSRSQ+AKTYLE+ F++F+
Sbjct: 121 QRYGRRPYGVGLLVAGYDQLGAHIYQTCPSGNFYDYKSISIGSRSQSAKTYLEKHFESFE 180

Query: 181 DSSRDDLIKDALIATRETLQG--EKLTSSICTVAILGVGEPFHILDRETVQKLIDEFE 237
           + + + LI   L A RET+    + L S   ++ I+G G+PF I++    Q  ++  E
Sbjct: 181 ECTLEQLITHGLRALRETIPNTDDTLNSKNVSIGIVGEGQPFKIIEEADAQPYLNLLE 238

[Close]

BLAST of MS016841 vs. ExPASy Swiss-Prot
Match: P18420 (Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2)

HSP 1 Score: 260.8 bits (665), Expect = 1.8e-68
Identity = 130/258 (50.39%), Postives = 175/258 (67.83%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYD DVT WSP GR+ Q+EYAMEAVKQGSA +GL+SKTH VL  + +A SEL++HQ
Sbjct: 1   MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKI  VD+HIG++I+GLTAD R+L  +MR EC++  + ++ PLPV RLV  +  K Q+ T
Sbjct: 61  KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFDNFK 180
           QR  +RPYGVGLL+ G D+ G H++  CPS NYF+ +A +IG+RSQ+A+TYLER    F 
Sbjct: 121 QRYGRRPYGVGLLIAGYDDMGPHVFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFM 180

Query: 181 DSSRDDLIKDALIATRETLQGEK-LTSSICTVAILGVGEPFHILDRETVQKLIDEFEIVK 240
             + D+L+K  L A RETL  E+ LT+   ++ I+G    F I D + V   +D  E   
Sbjct: 181 QCNLDELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLDGLEERP 240

Query: 241 EDDV-PAADQDVAAEQGD 257
           +    P+   D  AE+ D
Sbjct: 241 QRKAQPSQAADEPAEKAD 258

[Close]

BLAST of MS016841 vs. ExPASy TrEMBL
Match: A0A6J1CT84 (Proteasome subunit alpha type OS=Momordica charantia OX=3673 GN=LOC111013999 PE=3 SV=1)

HSP 1 Score: 554.7 bits (1428), Expect = 2.2e-154
Identity = 280/281 (99.64%), Postives = 281/281 (100.00%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFDNFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFDNFK
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFDNFK 180

Query: 181 DSSRDDLIKDALIATRETLQGEKLTSSICTVAILGVGEPFHILDRETVQKLIDEFEIVKE 240
           DSSRD+LIKDALIATRETLQGEKLTSSICTVAILGVGEPFHILDRETVQKLIDEFEIVKE
Sbjct: 181 DSSRDNLIKDALIATRETLQGEKLTSSICTVAILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDVPAADQDVAAEQGDSAAPEQAAGTDQGSAPDQGVAPMDI 282
           DDVPAADQDVAAEQGDSAAPEQAAGTDQGSAPDQGVAPMDI
Sbjct: 241 DDVPAADQDVAAEQGDSAAPEQAAGTDQGSAPDQGVAPMDI 281

[Close]

BLAST of MS016841 vs. ExPASy TrEMBL
Match: A0A5A7VC66 (Proteasome subunit alpha type OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005560 PE=3 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 6.1e-152
Identity = 274/281 (97.51%), Postives = 278/281 (98.93%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRS THVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFDNFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF+NFK
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALIATRETLQGEKLTSSICTVAILGVGEPFHILDRETVQKLIDEFEIVKE 240
           DSSRD+LIKDALIATRETLQGEKLTSSICT+AILGVGEPFHILDRETVQKLIDEFEIVKE
Sbjct: 181 DSSRDELIKDALIATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDVPAADQDVAAEQGDSAAPEQAAGTDQGSAPDQGVAPMDI 282
           DDVPAADQD+A EQGDSAAPE AAGTDQGSAPDQGVAPMDI
Sbjct: 241 DDVPAADQDIAPEQGDSAAPEPAAGTDQGSAPDQGVAPMDI 281

[Close]

BLAST of MS016841 vs. ExPASy TrEMBL
Match: A0A1S3BBW8 (Proteasome subunit alpha type OS=Cucumis melo OX=3656 GN=LOC103487987 PE=3 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 6.1e-152
Identity = 274/281 (97.51%), Postives = 278/281 (98.93%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRS THVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFDNFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF+NFK
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALIATRETLQGEKLTSSICTVAILGVGEPFHILDRETVQKLIDEFEIVKE 240
           DSSRD+LIKDALIATRETLQGEKLTSSICT+AILGVGEPFHILDRETVQKLIDEFEIVKE
Sbjct: 181 DSSRDELIKDALIATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDVPAADQDVAAEQGDSAAPEQAAGTDQGSAPDQGVAPMDI 282
           DDVPAADQD+A EQGDSAAPE AAGTDQGSAPDQGVAPMDI
Sbjct: 241 DDVPAADQDIAPEQGDSAAPEPAAGTDQGSAPDQGVAPMDI 281

[Close]

BLAST of MS016841 vs. ExPASy TrEMBL
Match: A0A0A0LLH5 (Proteasome subunit alpha type OS=Cucumis sativus OX=3659 GN=Csa_2G361820 PE=3 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 1.8e-151
Identity = 273/281 (97.15%), Postives = 277/281 (98.58%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRS THVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFDNFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF+NFK
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALIATRETLQGEKLTSSICTVAILGVGEPFHILDRETVQKLIDEFEIVKE 240
           DSSRD+LIKDALIATRETLQGEKLTSSICT+AILGVGEPFHILDRETVQKLIDEFEIVKE
Sbjct: 181 DSSRDELIKDALIATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDVPAADQDVAAEQGDSAAPEQAAGTDQGSAPDQGVAPMDI 282
           DDVPA DQD+A EQGDSAAPE AAGTDQGSAPDQGVAPMDI
Sbjct: 241 DDVPAVDQDIAPEQGDSAAPEPAAGTDQGSAPDQGVAPMDI 281

[Close]

BLAST of MS016841 vs. ExPASy TrEMBL
Match: A0A6J1HD20 (Proteasome subunit alpha type OS=Cucurbita moschata OX=3662 GN=LOC111462503 PE=3 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 5.2e-151
Identity = 275/282 (97.52%), Postives = 279/282 (98.94%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFDNFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF+NFK
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALIATRETLQGEKLTSSICTVAILGVGEPFHILDRETVQKLIDEFEIVKE 240
           DSSRDDLIKDAL+ATRETLQGEKLTSSICT++ILGVGEPFHILDRETVQKLIDEFEIVKE
Sbjct: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDVPAADQDVAAEQGDSAAPE-QAAGTDQGSAPDQGVAPMDI 282
           DDVPAADQDVA EQGDSAAPE  AAGTDQGSAPDQGVAPMDI
Sbjct: 241 DDVPAADQDVAPEQGDSAAPEPAAAGTDQGSAPDQGVAPMDI 282

[Close]

BLAST of MS016841 vs. TAIR 10
Match: AT1G47250.1 (20S proteasome alpha subunit F2 )

HSP 1 Score: 442.2 bits (1136), Expect = 3.1e-124
Identity = 221/281 (78.65%), Postives = 250/281 (88.97%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSP GRLFQVEYAMEAVKQGSAAIGLRS++HVVLACVNKA SELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           +KIFKVDDHIGVAI+GLTADGRVLSRYMRSE IN+S+TYESPLPVGRLVV LADKAQVCT
Sbjct: 61  RKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFDNFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLER+F++F+
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFESFQ 180

Query: 181 DSSRDDLIKDALIATRETLQGEKLTSSICTVAILGVGEPFHILDRETVQKLIDEFEIVKE 240
           +SS++DLIKDA++A RETLQGE L SS+CTV++LGV EPFH LD+E++QK+ID FE V E
Sbjct: 181 ESSKEDLIKDAIMAIRETLQGETLKSSLCTVSVLGVDEPFHFLDQESIQKVIDTFEKVPE 240

Query: 241 DDVPAADQDVAAEQGDSAAPEQAAGTDQGSAPDQGVAPMDI 282
           ++  A + +   E    AAP  A   +QG + DQ VAPM+I
Sbjct: 241 EEEDAGEGEAEPE----AAPGAAGTGEQGGSGDQDVAPMEI 277

[Close]

BLAST of MS016841 vs. TAIR 10
Match: AT5G42790.1 (proteasome alpha subunit F1 )

HSP 1 Score: 441.0 bits (1133), Expect = 7.0e-124
Identity = 223/281 (79.36%), Postives = 245/281 (87.19%), Query Frame = 0


Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSP GRLFQVEYAMEAVKQGSAAIGLRS++HVVLACVNKA SELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           +KIFKVDDHIGVAI+GLTADGRVLSRYMRSE IN+S+TYESPLPVGRLVV LADKAQVCT
Sbjct: 61  RKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFDNFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF++F 
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFESFG 180

Query: 181 DSSRDDLIKDALIATRETLQGEKLTSSICTVAILGVGEPFHILDRETVQKLIDEFEIVKE 240
           DSSR+DLIKDA++A RETLQGE L SS+CTVAILGV EPFH LD+E +QK+ID FE V E
Sbjct: 181 DSSREDLIKDAILAVRETLQGETLKSSLCTVAILGVDEPFHFLDQEAIQKVIDTFEKVPE 240

Query: 241 DDVPAADQDVAAEQGDSAAPEQAAGTDQGSAPDQGVAPMDI 282
           ++    +      +   AAP +  G   G A DQ VAPM++
Sbjct: 241 EEEGEGEAGEGEAEAAEAAPAERGG---GVAGDQDVAPMEM 278

[Close]

BLAST of MS016841 vs. TAIR 10
Match: AT1G53850.1 (20S proteasome alpha subunit E1 )

HSP 1 Score: 156.0 bits (393), Expect = 4.5e-38
Identity = 95/235 (40.43%), Postives = 137/235 (58.30%), Query Frame = 0


Query: 3   RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSEL--SSHQ 62
           R +YD  V T+SP GRLFQVEYA+EA+K GS AIG+++K  VVLA   +  S L   S  
Sbjct: 5   RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSV 64

Query: 63  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA---Q 122
           +KI ++DDHIG A+SGL AD R L  + R E  N+ ++Y  P+ V      L D A    
Sbjct: 65  EKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFG 124

Query: 123 VCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFD 182
              + S  RP+GV LL+ G DE+G  LYY  PSG +++  A AIGS S+ A + L+ +F+
Sbjct: 125 EGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFN 184

Query: 183 NFKDSSRDDLIKDALIATRETLQGEKLTSSICTVAILGVGEPFHILDRETVQKLI 233
             KD S  +    A+   ++ ++ EK+T +   V I  V   +H+   + V+ +I
Sbjct: 185 --KDLSLQEAETIAVSILKQVME-EKVTPN--NVDIAKVAPAYHLYTPQEVEAVI 234

[Close]

BLAST of MS016841 vs. TAIR 10
Match: AT1G53850.2 (20S proteasome alpha subunit E1 )

HSP 1 Score: 156.0 bits (393), Expect = 4.5e-38
Identity = 95/235 (40.43%), Postives = 137/235 (58.30%), Query Frame = 0


Query: 3   RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSEL--SSHQ 62
           R +YD  V T+SP GRLFQVEYA+EA+K GS AIG+++K  VVLA   +  S L   S  
Sbjct: 5   RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSV 64

Query: 63  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA---Q 122
           +KI ++DDHIG A+SGL AD R L  + R E  N+ ++Y  P+ V      L D A    
Sbjct: 65  EKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFG 124

Query: 123 VCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFD 182
              + S  RP+GV LL+ G DE+G  LYY  PSG +++  A AIGS S+ A + L+ +F+
Sbjct: 125 EGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFN 184

Query: 183 NFKDSSRDDLIKDALIATRETLQGEKLTSSICTVAILGVGEPFHILDRETVQKLI 233
             KD S  +    A+   ++ ++ EK+T +   V I  V   +H+   + V+ +I
Sbjct: 185 --KDLSLQEAETIAVSILKQVME-EKVTPN--NVDIAKVAPAYHLYTPQEVEAVI 234

[Close]

BLAST of MS016841 vs. TAIR 10
Match: AT3G14290.1 (20S proteasome alpha subunit E2 )

HSP 1 Score: 154.8 bits (390), Expect = 1.0e-37
Identity = 94/235 (40.00%), Postives = 137/235 (58.30%), Query Frame = 0


Query: 3   RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSEL--SSHQ 62
           R +YD  V T+SP GRLFQVEYA+EA+K GS AIG+++K  VVLA   +  S L   S  
Sbjct: 5   RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSV 64

Query: 63  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA---Q 122
           +KI ++DDHIG A+SGL AD R L  + R E  N+ ++Y  P+ V      L D A    
Sbjct: 65  EKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFG 124

Query: 123 VCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFD 182
              + S  RP+GV LL+ G DE+G  LYY  PSG +++  A AIGS S+ A + L+ +F+
Sbjct: 125 EGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFN 184

Query: 183 NFKDSSRDDLIKDALIATRETLQGEKLTSSICTVAILGVGEPFHILDRETVQKLI 233
             KD +  +    A+   ++ ++ EK+T +   V I  V   +H+   + V+ +I
Sbjct: 185 --KDITLQEAETIAVSILKQVME-EKVTPN--NVDIAKVAPAYHLYTPQEVEAVI 234

The following BLAST results are available for this feature:

BLAST of MS016841 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144277.1	4.6e-154	99.64	proteasome subunit alpha type-1-B [Momordica charantia]	[more]
XP_023546840.1	1.3e-151	97.51	proteasome subunit alpha type-1-B-like [Cucurbita pepo subsp. pepo]	[more]
XP_008444739.1	1.3e-151	97.51	PREDICTED: proteasome subunit alpha type-1-B-like [Cucumis melo] >KAA0065218.1 p...	[more]
XP_038886220.1	2.8e-151	96.80	proteasome subunit alpha type-1-B-like [Benincasa hispida]	[more]
XP_004152689.1	3.7e-151	97.15	proteasome subunit alpha type-1-B [Cucumis sativus] >KGN62618.1 hypothetical pro...	[more]

BLAST of MS016841 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23712	4.4e-123	78.65	Proteasome subunit alpha type-1-B OS=Arabidopsis thaliana OX=3702 GN=PAF2 PE=1 S...	[more]
P34066	9.8e-123	79.36	Proteasome subunit alpha type-1-A OS=Arabidopsis thaliana OX=3702 GN=PAF1 PE=1 S...	[more]
P52428	3.2e-105	68.53	Proteasome subunit alpha type-1 OS=Oryza sativa subsp. japonica OX=39947 GN=PAF1...	[more]
Q27562	1.6e-72	54.62	Proteasome subunit alpha type-1 OS=Dictyostelium discoideum OX=44689 GN=psmA1 PE...	[more]
P18420	1.8e-68	50.39	Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2	[more]

BLAST of MS016841 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CT84	2.2e-154	99.64	Proteasome subunit alpha type OS=Momordica charantia OX=3673 GN=LOC111013999 PE=...	[more]
A0A5A7VC66	6.1e-152	97.51	Proteasome subunit alpha type OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3BBW8	6.1e-152	97.51	Proteasome subunit alpha type OS=Cucumis melo OX=3656 GN=LOC103487987 PE=3 SV=1	[more]
A0A0A0LLH5	1.8e-151	97.15	Proteasome subunit alpha type OS=Cucumis sativus OX=3659 GN=Csa_2G361820 PE=3 SV...	[more]
A0A6J1HD20	5.2e-151	97.52	Proteasome subunit alpha type OS=Cucurbita moschata OX=3662 GN=LOC111462503 PE=3...	[more]

BLAST of MS016841 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47250.1	3.1e-124	78.65	20S proteasome alpha subunit F2	[more]
AT5G42790.1	7.0e-124	79.36	proteasome alpha subunit F1	[more]
AT1G53850.1	4.5e-38	40.43	20S proteasome alpha subunit E1	[more]
AT1G53850.2	4.5e-38	40.43	20S proteasome alpha subunit E1	[more]
AT3G14290.1	1.0e-37	40.00	20S proteasome alpha subunit E2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000426	Proteasome alpha-subunit, N-terminal domain	SMART	SM00948	Proteasome_A_N_2	coord: 6..28 e-value: 4.5E-10 score: 49.5
IPR000426	Proteasome alpha-subunit, N-terminal domain	PFAM	PF10584	Proteasome_A_N	coord: 6..28 e-value: 6.8E-14 score: 51.2
IPR000426	Proteasome alpha-subunit, N-terminal domain	PROSITE	PS00388	PROTEASOME_ALPHA_1	coord: 6..28
IPR001353	Proteasome, subunit alpha/beta	PFAM	PF00227	Proteasome	coord: 29..213 e-value: 1.4E-57 score: 194.2
IPR029055	Nucleophile aminohydrolases, N-terminal	GENE3D	3.60.20.10	Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1	coord: 2..232 e-value: 1.6E-84 score: 284.7
IPR029055	Nucleophile aminohydrolases, N-terminal	SUPERFAMILY	56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	coord: 4..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 243..281
None	No IPR available	PANTHER	PTHR11599	PROTEASOME SUBUNIT ALPHA/BETA	coord: 1..272
None	No IPR available	PANTHER	PTHR11599:SF182	PROTEASOME SUBUNIT ALPHA TYPE	coord: 1..272
IPR023332	Proteasome alpha-type subunit	PROSITE	PS51475	PROTEASOME_ALPHA_2	coord: 21..232 score: 76.424675
IPR035144	Proteasome subunit alpha 1	CDD	cd03749	proteasome_alpha_type_1	coord: 6..215 e-value: 6.49328E-145 score: 403.21

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS016841.1	MS016841.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051603	proteolysis involved in cellular protein catabolic process
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005839	proteasome core complex
cellular_component	GO:0019773	proteasome core complex, alpha-subunit complex