MS016831 (gene) Bitter gourd (TR) v1

Overview


Name	MS016831
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Protein RER1
Location	scaffold9_1: 319956 .. 321120 (+)
RNA-Seq Expression	MS016831
Synteny	MS016831

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGAGTTGGGGACGACGCGGCCTCAGCAGTAGCACCTCTGGCCAAGTGGAGAAACGATTTTGCCAGAGCATTTCAGTATTACTTGGATCGATCCACTCCTCACCCAGTCCAGAGGTGGTTGGGAACCCTTCTTGTTGCAGCAATTTATGTGTTGCGTGTTTTCTACGTTCAAGGGTTTTATGTTGTTTCATATGGCTTGGGAATCTATATCTTGAATCTCTTGATTGGGTTTCTGTCGCCGAAGGTTGATCCCGAGCTCGATGTTTTAGACGGAGCTTCCTTGCCTACTAAAGGTTCTGATGAGTTTAGGCCCTTCATACGCCGCCTTCCGGAGTTCAAGTTTTGGTATTCCTCTTTGCTTTAGCTAGTTTAGTAATTTTGCTTTCTGCATTTCATTGCGTTTAATTTTGGAAATGGTTTTTGGCTAACTATCATGTAAGTTATGTTCTGGTTTTTTCTAGCAATAATTAAAAGAAGAGTTTATTGCTGAAAACTATTATGCGGTGCTGCATTTGATATTCCTTTCTCGCTCTTGATTTTGAAATGTTGTAAAAAATTATATATATAACTTGCACTCTGAAAAAGATTAATGTGTACTTCTGTAAGGTTCTTCTTGCCAAGTGTAAACATATTGCAAAAACTTGTCATTGCATGGAGATGGGGTGAGTTTGATGTCGGTGGTGAACTCGTTTTCTCTTGTCAAGTGTCAACTTATTTCAGACACTTGCCATTTCATGATCAGGATCGACATTCACTGAATTGTGAAGTATTAGATACTATTAGTGAATTGTGCAGCATTACATACTTTTGGCTTTGATGATTCCGGTGGACTCTTTCACTTTCAAGTGTCCAACTTAATGCAAATGATTGTCATTGCTCGAGGTTGGAGTGAAATGTGCAGCATCTGCCACTGGTATCATTTAGTTGAATTCATGACTTAGTGGACTCTTGAGCCTTTTTTTCCTTTCTTTTTTTCCAGGTACGCCATCACCAAAGCTTTTTGTATTGCCTTCTTCATGACCTTCTTCTCACTCTTTGATGTTCCTGTCTTCTGGCCCATTCTTCTTTGCTATTGGATTGTTCTATTTGTCCTGACAATGAAGCGCCAGATCATGCACATGATCAAATACAAATATATTCCTTTCAGCATTGGGAAACAG

mRNA sequence

ATGGAAGGAGTTGGGGACGACGCGGCCTCAGCAGTAGCACCTCTGGCCAAGTGGAGAAACGATTTTGCCAGAGCATTTCAGTATTACTTGGATCGATCCACTCCTCACCCAGTCCAGAGGTGGTTGGGAACCCTTCTTGTTGCAGCAATTTATGTGTTGCGTGTTTTCTACGTTCAAGGGTTTTATGTTGTTTCATATGGCTTGGGAATCTATATCTTGAATCTCTTGATTGGGTTTCTGTCGCCGAAGGTTGATCCCGAGCTCGATGTTTTAGACGGAGCTTCCTTGCCTACTAAAGGTTCTGATGAGTTTAGGCCCTTCATACGCCGCCTTCCGGAGTTCAAGTTTTGGTACGCCATCACCAAAGCTTTTTGTATTGCCTTCTTCATGACCTTCTTCTCACTCTTTGATGTTCCTGTCTTCTGGCCCATTCTTCTTTGCTATTGGATTGTTCTATTTGTCCTGACAATGAAGCGCCAGATCATGCACATGATCAAATACAAATATATTCCTTTCAGCATTGGGAAACAG

Coding sequence (CDS)

ATGGAAGGAGTTGGGGACGACGCGGCCTCAGCAGTAGCACCTCTGGCCAAGTGGAGAAACGATTTTGCCAGAGCATTTCAGTATTACTTGGATCGATCCACTCCTCACCCAGTCCAGAGGTGGTTGGGAACCCTTCTTGTTGCAGCAATTTATGTGTTGCGTGTTTTCTACGTTCAAGGGTTTTATGTTGTTTCATATGGCTTGGGAATCTATATCTTGAATCTCTTGATTGGGTTTCTGTCGCCGAAGGTTGATCCCGAGCTCGATGTTTTAGACGGAGCTTCCTTGCCTACTAAAGGTTCTGATGAGTTTAGGCCCTTCATACGCCGCCTTCCGGAGTTCAAGTTTTGGTACGCCATCACCAAAGCTTTTTGTATTGCCTTCTTCATGACCTTCTTCTCACTCTTTGATGTTCCTGTCTTCTGGCCCATTCTTCTTTGCTATTGGATTGTTCTATTTGTCCTGACAATGAAGCGCCAGATCATGCACATGATCAAATACAAATATATTCCTTTCAGCATTGGGAAACAG

Protein sequence

MEGVGDDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAITKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ

Homology

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BLAST of MS016831 vs. NCBI nr
Match: XP_022144203.1 (protein RER1B-like [Momordica charantia] >XP_022144204.1 protein RER1B-like [Momordica charantia])

HSP 1 Score: 355.9 bits (912), Expect = 2.0e-94
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MEGVGDDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG 60
           MEGVGDDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG
Sbjct: 1   MEGVGDDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG 60

Query: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAI 120
           FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAI
Sbjct: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAI 120

Query: 121 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ 178
           TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ
Sbjct: 121 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ 177

[Close]

BLAST of MS016831 vs. NCBI nr
Match: XP_022961870.1 (protein RER1B-like [Cucurbita moschata])

HSP 1 Score: 354.4 bits (908), Expect = 5.8e-94
Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MEGVGDDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG 60
           MEGVGDDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG
Sbjct: 1   MEGVGDDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG 60

Query: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAI 120
           FYVVSYGLGIYILNLLIGFLSPKVDPELDVL+GASLPTKGSDEFRPFIRRLPEFKFWYAI
Sbjct: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLEGASLPTKGSDEFRPFIRRLPEFKFWYAI 120

Query: 121 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ 178
           TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ
Sbjct: 121 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ 177

[Close]

BLAST of MS016831 vs. NCBI nr
Match: KAG6598452.1 (Protein RER1B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 354.4 bits (908), Expect = 5.8e-94
Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MEGVGDDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG 60
           MEGVGDDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG
Sbjct: 64  MEGVGDDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG 123

Query: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAI 120
           FYVVSYGLGIYILNLLIGFLSPKVDPELDVL+GASLPTKGSDEFRPFIRRLPEFKFWYAI
Sbjct: 124 FYVVSYGLGIYILNLLIGFLSPKVDPELDVLEGASLPTKGSDEFRPFIRRLPEFKFWYAI 183

Query: 121 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ 178
           TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ
Sbjct: 184 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ 240

[Close]

BLAST of MS016831 vs. NCBI nr
Match: KAG7029392.1 (Protein RER1B, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 354.4 bits (908), Expect = 5.8e-94
Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MEGVGDDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG 60
           MEGVGDDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG
Sbjct: 67  MEGVGDDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG 126

Query: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAI 120
           FYVVSYGLGIYILNLLIGFLSPKVDPELDVL+GASLPTKGSDEFRPFIRRLPEFKFWYAI
Sbjct: 127 FYVVSYGLGIYILNLLIGFLSPKVDPELDVLEGASLPTKGSDEFRPFIRRLPEFKFWYAI 186

Query: 121 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ 178
           TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ
Sbjct: 187 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ 243

[Close]

BLAST of MS016831 vs. NCBI nr
Match: XP_023547095.1 (protein RER1B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 354.0 bits (907), Expect = 7.6e-94
Identity = 175/177 (98.87%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MEGVGDDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG 60
           MEGVGDDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG
Sbjct: 1   MEGVGDDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG 60

Query: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAI 120
           FYVVSYGLGIYILNLLIGFLSPKVDPELDVL+GASLPTKGSDEFRPFIRRLPEFKFWYAI
Sbjct: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLEGASLPTKGSDEFRPFIRRLPEFKFWYAI 120

Query: 121 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ 178
           TKAFC+AFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ
Sbjct: 121 TKAFCVAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ 177

[Close]

BLAST of MS016831 vs. ExPASy Swiss-Prot
Match: O48671 (Protein RER1B OS=Arabidopsis thaliana OX=3702 GN=RER1B PE=1 SV=2)

HSP 1 Score: 270.8 bits (691), Expect = 1.1e-71
Identity = 128/177 (72.32%), Postives = 152/177 (85.88%), Query Frame = 0


Query: 1   MEGVGDDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG 60
           MEG G D+ S   P+ K  ++  R +QYYLD++TPH   RW+GTL+   IY LRV+ + G
Sbjct: 1   MEGSGGDSGSMATPVQKKVHEAWRVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYSIHG 60

Query: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAI 120
           FY++SYGLGIY+LNLLIGFLSP VDPEL+V DGA+LPT+GSDEF+PFIRRLPEFKFWY++
Sbjct: 61  FYIISYGLGIYLLNLLIGFLSPLVDPELEVSDGATLPTRGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ 178
           TKAFCIAF MTFFS+FDVPVFWPILLCYW+VLFVLTM+RQI HMIK+KYIPFSIGKQ
Sbjct: 121 TKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKHKYIPFSIGKQ 177

[Close]

BLAST of MS016831 vs. ExPASy Swiss-Prot
Match: O48670 (Protein RER1A OS=Arabidopsis thaliana OX=3702 GN=RER1A PE=1 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 2.3e-69
Identity = 127/178 (71.35%), Postives = 151/178 (84.83%), Query Frame = 0


Query: 1   MEGVGDDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG 60
           M+  G D+ S   P+ +  ++  R +Q+YLD++TPH   RW+GTL+VA IY LRV+Y+QG
Sbjct: 1   MDESGGDSGSVATPVQQRAHEAWRIYQHYLDKTTPHANYRWIGTLVVALIYCLRVYYIQG 60

Query: 61  FYVVSYGLGIYILNLLIGFLSPKVDPEL-DVLDGASLPTKGSDEFRPFIRRLPEFKFWYA 120
           FY+++YGLGIY+LNLLIGFLSP VDPE   V DG SLPT+GSDEF+PFIRRLPEFKFWY+
Sbjct: 61  FYIIAYGLGIYLLNLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRRLPEFKFWYS 120

Query: 121 ITKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ 178
           +TKAFCIAF MTFFS+FDVPVFWPILLCYWIVLFVLTM+RQI HMIKYKYIPFS GKQ
Sbjct: 121 MTKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSFGKQ 178

[Close]

BLAST of MS016831 vs. ExPASy Swiss-Prot
Match: Q9ZPV7 (Protein RER1D OS=Arabidopsis thaliana OX=3702 GN=At2g18240 PE=2 SV=2)

HSP 1 Score: 236.1 bits (601), Expect = 3.0e-61
Identity = 116/175 (66.29%), Postives = 141/175 (80.57%), Query Frame = 0


Query: 3   GVGDDAASAVA-PLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGF 62
           G  ++A + VA PLAKWR +F+++FQ YLDRS P+ V+RWL TL+ A IY+ RV+ V G+
Sbjct: 6   GSENEADTIVASPLAKWRIEFSKSFQNYLDRSAPNIVRRWLVTLVAAVIYIYRVYSVYGY 65

Query: 63  YVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAIT 122
           +V+SYGL  YILNLLIGFLSPKVDPEL+ LD  SLP   SDE++PF+RRLPEFKFWYA T
Sbjct: 66  FVISYGLATYILNLLIGFLSPKVDPELEALDPDSLPVDESDEYKPFVRRLPEFKFWYAAT 125

Query: 123 KAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGK 177
           KAF +AF MTFFS  DVPVFWPILLCYW+VL+ LTMKR I+HM KY+Y PF + K
Sbjct: 126 KAFVVAFVMTFFSFLDVPVFWPILLCYWLVLYSLTMKRLIVHMFKYRYFPFDVRK 180

[Close]

BLAST of MS016831 vs. ExPASy Swiss-Prot
Match: Q9ZWI7 (Protein RER1C OS=Arabidopsis thaliana OX=3702 GN=RER1C PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.3e-53
Identity = 95/171 (55.56%), Postives = 133/171 (77.78%), Query Frame = 0


Query: 7   DAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSY 66
           D++S    + +  + F++  Q+ LD++ PH + RW+  L V  IY++RV++V+GFY+++Y
Sbjct: 29  DSSSPADAVNRLIHAFSQRQQHLLDKTVPHVLYRWIACLCVVLIYIVRVYFVEGFYIITY 88

Query: 67  GLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAITKAFCI 126
            +GIY+LNL+I FLSP+ DPE  +  G SLPT+ SDE+RPF+RRLPEFKFW +I +AF I
Sbjct: 89  AIGIYLLNLIIAFLSPQEDPEASLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIRAFII 148

Query: 127 AFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ 178
            F MTFF +FDVPVFWPILL YW++LF LTM++QI HMIKY+Y+PFS GK+
Sbjct: 149 GFMMTFFEVFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPFSFGKK 199

[Close]

BLAST of MS016831 vs. ExPASy Swiss-Prot
Match: A5PJ65 (Protein RER1 OS=Bos taurus OX=9913 GN=RER1 PE=2 SV=2)

HSP 1 Score: 196.4 bits (498), Expect = 2.7e-49
Identity = 100/178 (56.18%), Postives = 131/178 (73.60%), Query Frame = 0


Query: 2   EGVGDDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGF 61
           + VGD      + + ++     + +Q +LD+STPH   RW+ TL ++ IY++RV+ +QG+
Sbjct: 5   DSVGDSVHGKPSVVYRFFTRLGQIYQSWLDKSTPHTAVRWVVTLGLSFIYMIRVYLLQGW 64

Query: 62  YVVSYGLGIYILNLLIGFLSPKVDPEL--DVLDGASLPTKGSDEFRPFIRRLPEFKFWYA 121
           Y+V+Y LGIY LNL I FLSPKVDP L  D  DG SLPTK ++EFRPFIRRLPEFKFW+A
Sbjct: 65  YIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHA 124

Query: 122 ITKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ 178
            TK   +A   TFF  F+VPVFWPIL+ Y+I+LF +TMKRQI HMIKY+YIPF+ GK+
Sbjct: 125 ATKGILVAMVCTFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKR 182

[Close]

BLAST of MS016831 vs. ExPASy TrEMBL
Match: A0A6J1CRM0 (Protein RER1 OS=Momordica charantia OX=3673 GN=LOC111013953 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 9.7e-95
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MEGVGDDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG 60
           MEGVGDDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG
Sbjct: 1   MEGVGDDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG 60

Query: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAI 120
           FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAI
Sbjct: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAI 120

Query: 121 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ 178
           TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ
Sbjct: 121 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ 177

[Close]

BLAST of MS016831 vs. ExPASy TrEMBL
Match: A0A6J1HDF6 (Protein RER1 OS=Cucurbita moschata OX=3662 GN=LOC111462507 PE=3 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 2.8e-94
Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MEGVGDDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG 60
           MEGVGDDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG
Sbjct: 1   MEGVGDDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG 60

Query: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAI 120
           FYVVSYGLGIYILNLLIGFLSPKVDPELDVL+GASLPTKGSDEFRPFIRRLPEFKFWYAI
Sbjct: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLEGASLPTKGSDEFRPFIRRLPEFKFWYAI 120

Query: 121 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ 178
           TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ
Sbjct: 121 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ 177

[Close]

BLAST of MS016831 vs. ExPASy TrEMBL
Match: A0A6J1K2P6 (Protein RER1 OS=Cucurbita maxima OX=3661 GN=LOC111491857 PE=3 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.1e-93
Identity = 175/177 (98.87%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 1   MEGVGDDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG 60
           MEGVGDDAAS VAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG
Sbjct: 1   MEGVGDDAASPVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG 60

Query: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAI 120
           FYVVSYGLGIYILNLLIGFLSPKVDPELDVL+GASLPTKGSDEFRPFIRRLPEFKFWYAI
Sbjct: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLEGASLPTKGSDEFRPFIRRLPEFKFWYAI 120

Query: 121 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ 178
           TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ
Sbjct: 121 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ 177

[Close]

BLAST of MS016831 vs. ExPASy TrEMBL
Match: A0A6J1KLH6 (Protein RER1 OS=Cucurbita maxima OX=3661 GN=LOC111496327 PE=3 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.2e-92
Identity = 174/177 (98.31%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 1   MEGVGDDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG 60
           MEGV  DAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTL+VAAIYVLRVFYVQG
Sbjct: 1   MEGVEGDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLVVAAIYVLRVFYVQG 60

Query: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAI 120
           FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAI
Sbjct: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAI 120

Query: 121 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ 178
           TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ
Sbjct: 121 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ 177

[Close]

BLAST of MS016831 vs. ExPASy TrEMBL
Match: A0A1S3BBV8 (Protein RER1 OS=Cucumis melo OX=3656 GN=LOC103487976 PE=3 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.0e-92
Identity = 173/177 (97.74%), Postives = 174/177 (98.31%), Query Frame = 0


Query: 1   MEGVGDDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG 60
           MEGVG D ASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG
Sbjct: 1   MEGVGGDTASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG 60

Query: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAI 120
           FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEF+PFIRRLPEFKFWYAI
Sbjct: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFKPFIRRLPEFKFWYAI 120

Query: 121 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ 178
           TKAFCIAF MTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ
Sbjct: 121 TKAFCIAFLMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ 177

[Close]

BLAST of MS016831 vs. TAIR 10
Match: AT2G21600.1 (endoplasmatic reticulum retrieval protein 1B )

HSP 1 Score: 270.8 bits (691), Expect = 7.9e-73
Identity = 128/177 (72.32%), Postives = 152/177 (85.88%), Query Frame = 0


Query: 1   MEGVGDDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG 60
           MEG G D+ S   P+ K  ++  R +QYYLD++TPH   RW+GTL+   IY LRV+ + G
Sbjct: 1   MEGSGGDSGSMATPVQKKVHEAWRVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYSIHG 60

Query: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAI 120
           FY++SYGLGIY+LNLLIGFLSP VDPEL+V DGA+LPT+GSDEF+PFIRRLPEFKFWY++
Sbjct: 61  FYIISYGLGIYLLNLLIGFLSPLVDPELEVSDGATLPTRGSDEFKPFIRRLPEFKFWYSM 120

Query: 121 TKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ 178
           TKAFCIAF MTFFS+FDVPVFWPILLCYW+VLFVLTM+RQI HMIK+KYIPFSIGKQ
Sbjct: 121 TKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKHKYIPFSIGKQ 177

[Close]

BLAST of MS016831 vs. TAIR 10
Match: AT4G39220.1 (Rer1 family protein )

HSP 1 Score: 263.1 bits (671), Expect = 1.6e-70
Identity = 127/178 (71.35%), Postives = 151/178 (84.83%), Query Frame = 0


Query: 1   MEGVGDDAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG 60
           M+  G D+ S   P+ +  ++  R +Q+YLD++TPH   RW+GTL+VA IY LRV+Y+QG
Sbjct: 1   MDESGGDSGSVATPVQQRAHEAWRIYQHYLDKTTPHANYRWIGTLVVALIYCLRVYYIQG 60

Query: 61  FYVVSYGLGIYILNLLIGFLSPKVDPEL-DVLDGASLPTKGSDEFRPFIRRLPEFKFWYA 120
           FY+++YGLGIY+LNLLIGFLSP VDPE   V DG SLPT+GSDEF+PFIRRLPEFKFWY+
Sbjct: 61  FYIIAYGLGIYLLNLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRRLPEFKFWYS 120

Query: 121 ITKAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ 178
           +TKAFCIAF MTFFS+FDVPVFWPILLCYWIVLFVLTM+RQI HMIKYKYIPFS GKQ
Sbjct: 121 MTKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSFGKQ 178

[Close]

BLAST of MS016831 vs. TAIR 10
Match: AT2G18240.1 (Rer1 family protein )

HSP 1 Score: 236.1 bits (601), Expect = 2.1e-62
Identity = 116/175 (66.29%), Postives = 141/175 (80.57%), Query Frame = 0


Query: 3   GVGDDAASAVA-PLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGF 62
           G  ++A + VA PLAKWR +F+++FQ YLDRS P+ V+RWL TL+ A IY+ RV+ V G+
Sbjct: 6   GSENEADTIVASPLAKWRIEFSKSFQNYLDRSAPNIVRRWLVTLVAAVIYIYRVYSVYGY 65

Query: 63  YVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAIT 122
           +V+SYGL  YILNLLIGFLSPKVDPEL+ LD  SLP   SDE++PF+RRLPEFKFWYA T
Sbjct: 66  FVISYGLATYILNLLIGFLSPKVDPELEALDPDSLPVDESDEYKPFVRRLPEFKFWYAAT 125

Query: 123 KAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGK 177
           KAF +AF MTFFS  DVPVFWPILLCYW+VL+ LTMKR I+HM KY+Y PF + K
Sbjct: 126 KAFVVAFVMTFFSFLDVPVFWPILLCYWLVLYSLTMKRLIVHMFKYRYFPFDVRK 180

[Close]

BLAST of MS016831 vs. TAIR 10
Match: AT2G18240.2 (Rer1 family protein )

HSP 1 Score: 236.1 bits (601), Expect = 2.1e-62
Identity = 116/175 (66.29%), Postives = 141/175 (80.57%), Query Frame = 0


Query: 3   GVGDDAASAVA-PLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGF 62
           G  ++A + VA PLAKWR +F+++FQ YLDRS P+ V+RWL TL+ A IY+ RV+ V G+
Sbjct: 6   GSENEADTIVASPLAKWRIEFSKSFQNYLDRSAPNIVRRWLVTLVAAVIYIYRVYSVYGY 65

Query: 63  YVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAIT 122
           +V+SYGL  YILNLLIGFLSPKVDPEL+ LD  SLP   SDE++PF+RRLPEFKFWYA T
Sbjct: 66  FVISYGLATYILNLLIGFLSPKVDPELEALDPDSLPVDESDEYKPFVRRLPEFKFWYAAT 125

Query: 123 KAFCIAFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGK 177
           KAF +AF MTFFS  DVPVFWPILLCYW+VL+ LTMKR I+HM KY+Y PF + K
Sbjct: 126 KAFVVAFVMTFFSFLDVPVFWPILLCYWLVLYSLTMKRLIVHMFKYRYFPFDVRK 180

[Close]

BLAST of MS016831 vs. TAIR 10
Match: AT2G23310.1 (Rer1 family protein )

HSP 1 Score: 209.9 bits (533), Expect = 1.6e-54
Identity = 95/171 (55.56%), Postives = 133/171 (77.78%), Query Frame = 0


Query: 7   DAASAVAPLAKWRNDFARAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQGFYVVSY 66
           D++S    + +  + F++  Q+ LD++ PH + RW+  L V  IY++RV++V+GFY+++Y
Sbjct: 29  DSSSPADAVNRLIHAFSQRQQHLLDKTVPHVLYRWIACLCVVLIYIVRVYFVEGFYIITY 88

Query: 67  GLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFRPFIRRLPEFKFWYAITKAFCI 126
            +GIY+LNL+I FLSP+ DPE  +  G SLPT+ SDE+RPF+RRLPEFKFW +I +AF I
Sbjct: 89  AIGIYLLNLIIAFLSPQEDPEASLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIRAFII 148

Query: 127 AFFMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQ 178
            F MTFF +FDVPVFWPILL YW++LF LTM++QI HMIKY+Y+PFS GK+
Sbjct: 149 GFMMTFFEVFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPFSFGKK 199

The following BLAST results are available for this feature:

BLAST of MS016831 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144203.1	2.0e-94	100.00	protein RER1B-like [Momordica charantia] >XP_022144204.1 protein RER1B-like [Mom...	[more]
XP_022961870.1	5.8e-94	99.44	protein RER1B-like [Cucurbita moschata]	[more]
KAG6598452.1	5.8e-94	99.44	Protein RER1B, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7029392.1	5.8e-94	99.44	Protein RER1B, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023547095.1	7.6e-94	98.87	protein RER1B-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS016831 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48671	1.1e-71	72.32	Protein RER1B OS=Arabidopsis thaliana OX=3702 GN=RER1B PE=1 SV=2	[more]
O48670	2.3e-69	71.35	Protein RER1A OS=Arabidopsis thaliana OX=3702 GN=RER1A PE=1 SV=1	[more]
Q9ZPV7	3.0e-61	66.29	Protein RER1D OS=Arabidopsis thaliana OX=3702 GN=At2g18240 PE=2 SV=2	[more]
Q9ZWI7	2.3e-53	55.56	Protein RER1C OS=Arabidopsis thaliana OX=3702 GN=RER1C PE=2 SV=1	[more]
A5PJ65	2.7e-49	56.18	Protein RER1 OS=Bos taurus OX=9913 GN=RER1 PE=2 SV=2	[more]

BLAST of MS016831 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CRM0	9.7e-95	100.00	Protein RER1 OS=Momordica charantia OX=3673 GN=LOC111013953 PE=3 SV=1	[more]
A0A6J1HDF6	2.8e-94	99.44	Protein RER1 OS=Cucurbita moschata OX=3662 GN=LOC111462507 PE=3 SV=1	[more]
A0A6J1K2P6	1.1e-93	98.87	Protein RER1 OS=Cucurbita maxima OX=3661 GN=LOC111491857 PE=3 SV=1	[more]
A0A6J1KLH6	1.2e-92	98.31	Protein RER1 OS=Cucurbita maxima OX=3661 GN=LOC111496327 PE=3 SV=1	[more]
A0A1S3BBV8	2.0e-92	97.74	Protein RER1 OS=Cucumis melo OX=3656 GN=LOC103487976 PE=3 SV=1	[more]

BLAST of MS016831 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21600.1	7.9e-73	72.32	endoplasmatic reticulum retrieval protein 1B	[more]
AT4G39220.1	1.6e-70	71.35	Rer1 family protein	[more]
AT2G18240.1	2.1e-62	66.29	Rer1 family protein	[more]
AT2G18240.2	2.1e-62	66.29	Rer1 family protein	[more]
AT2G23310.1	1.6e-54	55.56	Rer1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004932	Retrieval of early ER protein Rer1	PFAM	PF03248	Rer1	coord: 18..177 e-value: 1.6E-72 score: 242.8
IPR004932	Retrieval of early ER protein Rer1	PIRSF	PIRSF016013	AtER_Rer1p	coord: 1..177 e-value: 2.5E-81 score: 269.9
IPR004932	Retrieval of early ER protein Rer1	PANTHER	PTHR10743	PROTEIN RER1	coord: 1..177
None	No IPR available	PANTHER	PTHR10743:SF18	PROTEIN RER1D	coord: 1..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS016831.1	MS016831.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane