Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCTCACACACTACAGATTTCCATTTCCCCCCAAAGCCTATGAAGAAGAGAAGGTCCCATAAAAGAAAGCTTCCCCGGGAATCTCAAATCAACATGGCGGAGGCCAGAAGACAGGTAGCTCAAGCTTTGCAACTCCACAGATCGTCCTTGTCGTCTTCGACCATGGCCGCTGCAGGACCCACCGGGGAAAACCCCATCTTTTCAGGTTCGCAGCATTTTTGTTATTCGATACTGGAGTCTATGCCACTTCCTCAACCCACATGGTCCACCACTGCACCTTGTGTGCTGCGTAGTTCGCCGCTGGCGGCCATGGAAGAGCAGGAAATTTTTGAGTGGGGAGATTATGGAGAGAATGGAGATGGGCCAGCTTCCTACACGTGGTGGCTTGGATTTTTGAAGGCCTTGGATGTTAATAGCAAACCAGAGTATCCTAATGCAGAGATCACTCAGTGCCAGGATGGGTTGGAACGTGGAGAGGCACTGTTTCTCGAGCCAAGTGACCACAGCTCGTTTCCAGATGAATGGTTGATAGTTCCAATTAGTGAAGATGGGGGGTTTATTGACAACAACTGCCTTGGAAATGAATTCGCATCTAAC
mRNA sequence
ATCTCACACACTACAGATTTCCATTTCCCCCCAAAGCCTATGAAGAAGAGAAGGTCCCATAAAAGAAAGCTTCCCCGGGAATCTCAAATCAACATGGCGGAGGCCAGAAGACAGGTAGCTCAAGCTTTGCAACTCCACAGATCGTCCTTGTCGTCTTCGACCATGGCCGCTGCAGGACCCACCGGGGAAAACCCCATCTTTTCAGGTTCGCAGCATTTTTGTTATTCGATACTGGAGTCTATGCCACTTCCTCAACCCACATGGTCCACCACTGCACCTTGTGTGCTGCGTAGTTCGCCGCTGGCGGCCATGGAAGAGCAGGAAATTTTTGAGTGGGGAGATTATGGAGAGAATGGAGATGGGCCAGCTTCCTACACGTGGTGGCTTGGATTTTTGAAGGCCTTGGATGTTAATAGCAAACCAGAGTATCCTAATGCAGAGATCACTCAGTGCCAGGATGGGTTGGAACGTGGAGAGGCACTGTTTCTCGAGCCAAGTGACCACAGCTCGTTTCCAGATGAATGGTTGATAGTTCCAATTAGTGAAGATGGGGGGTTTATTGACAACAACTGCCTTGGAAATGAATTCGCATCTAAC
Coding sequence (CDS)
ATCTCACACACTACAGATTTCCATTTCCCCCCAAAGCCTATGAAGAAGAGAAGGTCCCATAAAAGAAAGCTTCCCCGGGAATCTCAAATCAACATGGCGGAGGCCAGAAGACAGGTAGCTCAAGCTTTGCAACTCCACAGATCGTCCTTGTCGTCTTCGACCATGGCCGCTGCAGGACCCACCGGGGAAAACCCCATCTTTTCAGGTTCGCAGCATTTTTGTTATTCGATACTGGAGTCTATGCCACTTCCTCAACCCACATGGTCCACCACTGCACCTTGTGTGCTGCGTAGTTCGCCGCTGGCGGCCATGGAAGAGCAGGAAATTTTTGAGTGGGGAGATTATGGAGAGAATGGAGATGGGCCAGCTTCCTACACGTGGTGGCTTGGATTTTTGAAGGCCTTGGATGTTAATAGCAAACCAGAGTATCCTAATGCAGAGATCACTCAGTGCCAGGATGGGTTGGAACGTGGAGAGGCACTGTTTCTCGAGCCAAGTGACCACAGCTCGTTTCCAGATGAATGGTTGATAGTTCCAATTAGTGAAGATGGGGGGTTTATTGACAACAACTGCCTTGGAAATGAATTCGCATCTAAC
Protein sequence
ISHTTDFHFPPKPMKKRRSHKRKLPRESQINMAEARRQVAQALQLHRSSLSSSTMAAAGPTGENPIFSGSQHFCYSILESMPLPQPTWSTTAPCVLRSSPLAAMEEQEIFEWGDYGENGDGPASYTWWLGFLKALDVNSKPEYPNAEITQCQDGLERGEALFLEPSDHSSFPDEWLIVPISEDGGFIDNNCLGNEFASN
Homology
BLAST of MS016768 vs. NCBI nr
Match:
KAG6580440.1 (hypothetical protein SDJN03_20442, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 259.2 bits (661), Expect = 2.9e-65
Identity = 141/207 (68.12%), Postives = 156/207 (75.36%), Query Frame = 0
Query: 16 KRRSHKRKLPRESQINMAEARRQVAQALQLHRSSLSSS---TMAAAGPTG-------ENP 75
KRRSH RK+PRES + MAEARRQ+AQALQLHRSS++SS TM+ A P G +
Sbjct: 2 KRRSHTRKIPRESVVKMAEARRQIAQALQLHRSSMASSFSTTMSMAEPIGCQGRDFEKKL 61
Query: 76 IFSGSQHFCYSILESMPLPQPTWSTTAPCVLRSSPLAAMEEQEIFEWGDYGENGDGPASY 135
+FSGSQHFCYSILESMP+PQPTWSTTAP VLR SP A MEEQEIFEW GDG ASY
Sbjct: 62 MFSGSQHFCYSILESMPVPQPTWSTTAPSVLR-SPEAPMEEQEIFEW------GDGQASY 121
Query: 136 TWWLGFLKALDVNSK--PEYPNA-----------EITQCQDGLERGEALFLEPSDHSSFP 195
WWLGFLKALDV+S EYPNA +TQCQDGLE GEALFLE SD++SF
Sbjct: 122 AWWLGFLKALDVDSSNDTEYPNAGNGNAVGMSSMVLTQCQDGLESGEALFLEASDNTSFT 181
Query: 196 DEWLIVPISEDGGFIDNNCLGNEFASN 200
DEWLI+PI EDGGFIDNNCLGN+ ASN
Sbjct: 182 DEWLIIPIGEDGGFIDNNCLGNDLASN 201
BLAST of MS016768 vs. NCBI nr
Match:
KGN58710.1 (hypothetical protein Csa_002623 [Cucumis sativus])
HSP 1 Score: 256.5 bits (654), Expect = 1.9e-64
Identity = 141/214 (65.89%), Postives = 158/214 (73.83%), Query Frame = 0
Query: 9 FPPKPMKKRRSHKRKLPRESQINMAEARRQVAQALQLHRSSLSSS---TMAAAGPTG--- 68
FP KP KRRSH RK+P E+ INMAEARRQ+A+ALQLHRSSLSSS T + A P+G
Sbjct: 7 FPRKP-TKRRSHTRKVPTEAVINMAEARRQIAEALQLHRSSLSSSSSTTTSMAEPSGCYV 66
Query: 69 ----ENPIFSGSQHFCYSILESMPLPQPTWSTTAPCVLRSSPLAAMEEQEIFEWGDYGEN 128
+ PI SGSQHFCYSI+ESMP+PQPTWSTT P V+R SP+A MEEQEIFEW
Sbjct: 67 FQFEKKPIVSGSQHFCYSIMESMPVPQPTWSTTEPSVVR-SPVAPMEEQEIFEW------ 126
Query: 129 GDGPASYTWWLGFLKALDVN--SKPEYPNA-----------EITQCQDGLERGEALFLEP 188
GDG ASY WWLGFLKALDVN + EY NA +T+CQDGLE GEALFLE
Sbjct: 127 GDGQASYAWWLGFLKALDVNISNDTEYENAGSGSAVGMSSMVLTRCQDGLESGEALFLEA 186
Query: 189 SDHSSFPDEWLIVPISEDGGFIDNNCLGNEFASN 200
SDH+S DEWLI+PI EDGGFIDNNCLGN+ ASN
Sbjct: 187 SDHTSLADEWLIIPIGEDGGFIDNNCLGNDLASN 212
BLAST of MS016768 vs. NCBI nr
Match:
KAA0044211.1 (TPRXL protein [Cucumis melo var. makuwa])
HSP 1 Score: 243.4 bits (620), Expect = 1.6e-60
Identity = 131/196 (66.84%), Postives = 146/196 (74.49%), Query Frame = 0
Query: 27 ESQINMAEARRQVAQALQLHRSSLSS---STMAAAGPTG-------ENPIFSGSQHFCYS 86
E+ INMAEARRQ+A+ALQLHRSSLSS +T + A P+G + PI SGSQHFCYS
Sbjct: 2 EAVINMAEARRQIAEALQLHRSSLSSTFPTTTSMAEPSGCYVFQFEKKPIVSGSQHFCYS 61
Query: 87 ILESMPLPQPTWSTTAPCVLRSSPLAAMEEQEIFEWGDYGENGDGPASYTWWLGFLKALD 146
I+ESMP+PQPTWSTT P V+R SP+A MEEQEIFEW GDG ASY WWLGFLKALD
Sbjct: 62 IMESMPVPQPTWSTTEPSVVR-SPVAPMEEQEIFEW------GDGQASYAWWLGFLKALD 121
Query: 147 VNS--KPEYPNAEI-----------TQCQDGLERGEALFLEPSDHSSFPDEWLIVPISED 200
VNS + EY NA I TQCQDGLE GEALFLE SDH+S DEWLI+PI ED
Sbjct: 122 VNSSNETEYENARIGSAVGMSSMVLTQCQDGLESGEALFLEASDHTSLADEWLIIPIGED 181
BLAST of MS016768 vs. NCBI nr
Match:
KAF3975449.1 (hypothetical protein CMV_001294 [Castanea mollissima])
HSP 1 Score: 151.0 bits (380), Expect = 1.1e-32
Identity = 97/207 (46.86%), Postives = 125/207 (60.39%), Query Frame = 0
Query: 12 KPMKKRRSHKRKLPRESQ----INMAEARRQVAQALQLHRSSLSSSTMAAA--------- 71
KPM++R SH R+ S INMA+ARR++A AL +HRSS S+S+ +++
Sbjct: 27 KPMRRRSSHGRRASSSSSQNCAINMAKARREIAHALHIHRSSSSTSSSSSSSSCVTNVQP 86
Query: 72 ---GPTGEN-----PIFSGSQHFCYSILES----MPLPQPTWSTTAPCVLRSSPLAAMEE 131
G T N P F GSQ +CYS++ES MP+P P WSTTAP +L + P ME
Sbjct: 87 ILLGNTYNNYDFTRPSFGGSQ-YCYSLMESMTMTMPIPDPIWSTTAPSILAAPPQPGMEA 146
Query: 132 QEIFEWGDYGENGDGPASYTWWLGFLKALD--VNSKPEYP-NAEITQC-QDGLERGEALF 190
E FEWG+ + AS+TWWLGFLK LD N +P+YP A +QC Q+G + GE F
Sbjct: 147 VE-FEWGE-----NNQASHTWWLGFLKTLDSKYNEEPKYPLGALFSQCQQEGPKIGEPPF 206
BLAST of MS016768 vs. NCBI nr
Match:
ESR42757.1 (hypothetical protein CICLE_v10013769mg [Citrus clementina])
HSP 1 Score: 139.8 bits (351), Expect = 2.5e-29
Identity = 84/183 (45.90%), Postives = 112/183 (61.20%), Query Frame = 0
Query: 12 KPMKKRRSHKRKLPRESQINMAEARRQVAQALQLHRSSLSSSTMAAAGPTGENPIFSGSQ 71
KPM +RRS R++ ++S INMAEARR++ QALQLHRSS ++ AAA T + S S
Sbjct: 12 KPM-RRRSQTRRMLQDSVINMAEARREIVQALQLHRSSTRTAAAAAATTTSASATTSSSA 71
Query: 72 HFC-YSILESMPLPQPTWSTTAPCV--LRSSPLAAMEEQEIFEWGDYGENGDGPASYTWW 131
C YS+ E+MP+P+P WSTTAP + S+ AA E FEWG A+Y WW
Sbjct: 72 QCCYYSLTEAMPIPEPIWSTTAPTIPAAPSATAAAAMESLEFEWGQ-----SQAAAYNWW 131
Query: 132 LGFLKALD-----VNSKPEYPNAEITQCQDGLERGEALF-LEPSD--HSSFPDEWLIVPI 184
LGFLK LD V + +YP++ + CQD L+ GE F ++ SD ++ PDEWL P
Sbjct: 132 LGFLKTLDGKINNVENYSKYPHSRVFGCQDNLKLGEGKFAVDASDDQQNTAPDEWLTFPT 188
BLAST of MS016768 vs. ExPASy TrEMBL
Match:
A0A0A0L9R9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G730740 PE=4 SV=1)
HSP 1 Score: 256.5 bits (654), Expect = 9.0e-65
Identity = 141/214 (65.89%), Postives = 158/214 (73.83%), Query Frame = 0
Query: 9 FPPKPMKKRRSHKRKLPRESQINMAEARRQVAQALQLHRSSLSSS---TMAAAGPTG--- 68
FP KP KRRSH RK+P E+ INMAEARRQ+A+ALQLHRSSLSSS T + A P+G
Sbjct: 7 FPRKP-TKRRSHTRKVPTEAVINMAEARRQIAEALQLHRSSLSSSSSTTTSMAEPSGCYV 66
Query: 69 ----ENPIFSGSQHFCYSILESMPLPQPTWSTTAPCVLRSSPLAAMEEQEIFEWGDYGEN 128
+ PI SGSQHFCYSI+ESMP+PQPTWSTT P V+R SP+A MEEQEIFEW
Sbjct: 67 FQFEKKPIVSGSQHFCYSIMESMPVPQPTWSTTEPSVVR-SPVAPMEEQEIFEW------ 126
Query: 129 GDGPASYTWWLGFLKALDVN--SKPEYPNA-----------EITQCQDGLERGEALFLEP 188
GDG ASY WWLGFLKALDVN + EY NA +T+CQDGLE GEALFLE
Sbjct: 127 GDGQASYAWWLGFLKALDVNISNDTEYENAGSGSAVGMSSMVLTRCQDGLESGEALFLEA 186
Query: 189 SDHSSFPDEWLIVPISEDGGFIDNNCLGNEFASN 200
SDH+S DEWLI+PI EDGGFIDNNCLGN+ ASN
Sbjct: 187 SDHTSLADEWLIIPIGEDGGFIDNNCLGNDLASN 212
BLAST of MS016768 vs. ExPASy TrEMBL
Match:
A0A5A7TRK0 (TPRXL protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G005700 PE=4 SV=1)
HSP 1 Score: 243.4 bits (620), Expect = 7.9e-61
Identity = 131/196 (66.84%), Postives = 146/196 (74.49%), Query Frame = 0
Query: 27 ESQINMAEARRQVAQALQLHRSSLSS---STMAAAGPTG-------ENPIFSGSQHFCYS 86
E+ INMAEARRQ+A+ALQLHRSSLSS +T + A P+G + PI SGSQHFCYS
Sbjct: 2 EAVINMAEARRQIAEALQLHRSSLSSTFPTTTSMAEPSGCYVFQFEKKPIVSGSQHFCYS 61
Query: 87 ILESMPLPQPTWSTTAPCVLRSSPLAAMEEQEIFEWGDYGENGDGPASYTWWLGFLKALD 146
I+ESMP+PQPTWSTT P V+R SP+A MEEQEIFEW GDG ASY WWLGFLKALD
Sbjct: 62 IMESMPVPQPTWSTTEPSVVR-SPVAPMEEQEIFEW------GDGQASYAWWLGFLKALD 121
Query: 147 VNS--KPEYPNAEI-----------TQCQDGLERGEALFLEPSDHSSFPDEWLIVPISED 200
VNS + EY NA I TQCQDGLE GEALFLE SDH+S DEWLI+PI ED
Sbjct: 122 VNSSNETEYENARIGSAVGMSSMVLTQCQDGLESGEALFLEASDHTSLADEWLIIPIGED 181
BLAST of MS016768 vs. ExPASy TrEMBL
Match:
A0A2N9GPB2 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS32169 PE=4 SV=1)
HSP 1 Score: 152.1 bits (383), Expect = 2.4e-33
Identity = 89/187 (47.59%), Postives = 119/187 (63.64%), Query Frame = 0
Query: 17 RRSHKRKLPRESQINMAEARRQVAQALQLHRSSLSSSTMAAAGPTGE----NPIFSGSQH 76
RR H RK ++ INM +ARR++A ALQLHRSS SS+T G P F+G+Q
Sbjct: 2 RRRHTRKASQDCVINMVKARREIAHALQLHRSSSSSTTTTTLGNNFNYDFIRPSFAGTQ- 61
Query: 77 FCYSILES--MPLPQPTWSTTAPCVLRS---SPLAAMEEQEIFEWGDYGENGDGPASYTW 136
+CYS++ES MP+P+P WSTTAP +L + P+ AME E FEWG+ + AS+TW
Sbjct: 62 YCYSLMESMTMPIPEPIWSTTAPSILAAPPPPPVPAMEALE-FEWGE-----NNQASHTW 121
Query: 137 WLGFLKALD--VNSKPEYP--NAEITQCQDGLERGEALFLEPSDHSSFPDEWLIVPISED 191
WLGFL+ LD N +P+YP N+ I Q+ + GE F++ SD S FPDEWLI P +ED
Sbjct: 122 WLGFLQTLDSKYNEEPKYPLGNSRIVFSQEAPKLGEPPFVDESDQSGFPDEWLIFPTTED 181
BLAST of MS016768 vs. ExPASy TrEMBL
Match:
A0A2N9G9P4 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24097 PE=4 SV=1)
HSP 1 Score: 150.6 bits (379), Expect = 6.9e-33
Identity = 89/188 (47.34%), Postives = 119/188 (63.30%), Query Frame = 0
Query: 17 RRSHKRKLPRESQINMAEARRQVAQALQLHRSSLSSSTMAAAGPTGEN-----PIFSGSQ 76
RR H RK ++ INM +ARR++A ALQLHRSS SS+T N P F+G+Q
Sbjct: 2 RRRHTRKASQDCVINMVKARREIAHALQLHRSSSSSTTTTTTLGNNFNYDFIRPSFAGTQ 61
Query: 77 HFCYSILES--MPLPQPTWSTTAPCVLRS---SPLAAMEEQEIFEWGDYGENGDGPASYT 136
+CYS++ES MP+P+P WSTTAP +L + P+ AME E FEWG+ + AS+T
Sbjct: 62 -YCYSLMESMTMPIPEPIWSTTAPSILAAPPPPPVPAMEALE-FEWGE-----NNQASHT 121
Query: 137 WWLGFLKALD--VNSKPEYP--NAEITQCQDGLERGEALFLEPSDHSSFPDEWLIVPISE 191
WWLGFL+ LD N +P+YP N+ I Q+ + GE F++ SD S FPDEWLI P +E
Sbjct: 122 WWLGFLQTLDSKYNEEPKYPLGNSRIVFSQEAPKLGEPPFVDESDQSGFPDEWLIFPTTE 181
BLAST of MS016768 vs. ExPASy TrEMBL
Match:
V4SPZ8 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10013769mg PE=4 SV=1)
HSP 1 Score: 139.8 bits (351), Expect = 1.2e-29
Identity = 84/183 (45.90%), Postives = 112/183 (61.20%), Query Frame = 0
Query: 12 KPMKKRRSHKRKLPRESQINMAEARRQVAQALQLHRSSLSSSTMAAAGPTGENPIFSGSQ 71
KPM +RRS R++ ++S INMAEARR++ QALQLHRSS ++ AAA T + S S
Sbjct: 12 KPM-RRRSQTRRMLQDSVINMAEARREIVQALQLHRSSTRTAAAAAATTTSASATTSSSA 71
Query: 72 HFC-YSILESMPLPQPTWSTTAPCV--LRSSPLAAMEEQEIFEWGDYGENGDGPASYTWW 131
C YS+ E+MP+P+P WSTTAP + S+ AA E FEWG A+Y WW
Sbjct: 72 QCCYYSLTEAMPIPEPIWSTTAPTIPAAPSATAAAAMESLEFEWGQ-----SQAAAYNWW 131
Query: 132 LGFLKALD-----VNSKPEYPNAEITQCQDGLERGEALF-LEPSD--HSSFPDEWLIVPI 184
LGFLK LD V + +YP++ + CQD L+ GE F ++ SD ++ PDEWL P
Sbjct: 132 LGFLKTLDGKINNVENYSKYPHSRVFGCQDNLKLGEGKFAVDASDDQQNTAPDEWLTFPT 188
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG6580440.1 | 2.9e-65 | 68.12 | hypothetical protein SDJN03_20442, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KGN58710.1 | 1.9e-64 | 65.89 | hypothetical protein Csa_002623 [Cucumis sativus] | [more] |
KAA0044211.1 | 1.6e-60 | 66.84 | TPRXL protein [Cucumis melo var. makuwa] | [more] |
KAF3975449.1 | 1.1e-32 | 46.86 | hypothetical protein CMV_001294 [Castanea mollissima] | [more] |
ESR42757.1 | 2.5e-29 | 45.90 | hypothetical protein CICLE_v10013769mg [Citrus clementina] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0L9R9 | 9.0e-65 | 65.89 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G730740 PE=4 SV=1 | [more] |
A0A5A7TRK0 | 7.9e-61 | 66.84 | TPRXL protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G005700... | [more] |
A0A2N9GPB2 | 2.4e-33 | 47.59 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS32169 PE=4 SV=1 | [more] |
A0A2N9G9P4 | 6.9e-33 | 47.34 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24097 PE=4 SV=1 | [more] |
V4SPZ8 | 1.2e-29 | 45.90 | Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10013769mg PE=4 ... | [more] |
Match Name | E-value | Identity | Description | |