MS016758 (gene) Bitter gourd (TR) v1

Overview


Name	MS016758
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein TIC 56, chloroplastic
Location	scaffold563: 670287 .. 673663 (+)
RNA-Seq Expression	MS016758
Synteny	MS016758

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCAATCAACTTCAATCCCTTCGAAAACTGGTTCTCCAGACGTCCTAATCCCATCCCTCCCCTCAATCTCACTGCATTTAGAGACTCGTTGTCTCAGAAATCCTCAACGTCCCCAAACTTTGCTTCTACGAGCCTCTCGAATTTCTTCAAGAGGTCGCAGAAACCAAAGAAAGCATCCGACGAACCAGGATACTACGGCAAAATGCTAGAGCAATTCGACTGGGAATGCGACAACTTACCCGATTACAGACACACCCCCGAGGTGGAGAAAATCTTGAACGAAGATCCTGTACTGGATAATAAAGAGAATCCAAGCGAAGAGGAGGTCGAAAAGAACGAGAAGCTATGGAAAGCGTTGCGAGCCAGCCCTGTTGTGCAATTCCTGGAACGTGCGGAGGAAATTGCAGCCAAATACAACGAGTTAGAGCTGAAGGAGAATGAGAATCCATACAGAAATGAGGACAAGAAGCTATGGAGGGCCATTCCTCATGTGCCTGGGCTTGACGGGCGGCCTATGCCGAGGAAAGCAATTAAGACGAAGAGGGAATCCGACGACAAATTTTGGGATTTTGCGAGACAGTTCTTTTTTGGGCTGTGGGGCTTCCGGCAGAGACCATATCCACCTGGTCGCCCGATCGATGTTGCGCAGGCCATTGGGTATAAGCGCCTCGAGAAGCGGTACTATGATTGTAAGTCTAAATTGGCGTGTTATTTGAAGAATGTGCTTCTGTTTTCCATTTGCCAAGTCTTTTCCTTAAGCTAAAATTCAGCTGATGAGGCCAAACTGATATGAGATATCTGAATTTCATCATGATATGAGTTCATACAAGTTCTGCTTCTGCTCATGTTTCTTAGATCTTCACTGCATCATTTTGGTGCTAAAACTTAAAAAATTTTAGATGGGCACTTTACTTTGTCATGAGTTTTACTTTTACAGTGTTTGATGAACCCATATAATCCACATTTCAATCTTTTTTGATCAGTTTCCTAGTGTTTCCTTCTAGTTCATGGTTCTTAGCATGATTGTTTCTGACTTGGCAGTTATCATGAGGAGTGGAGGTTGGTACTATAAGGATCGGTTGGGTCGTACTCGGGGACCATTGGAACTAATTACTCTTAAAACAGCTTGGGGAGGTGGGATTATTGACAAGGACACATTTATTTGGGGGGAGGACATGGACGAATGGGCTCCAATTCACATGGTTTATGGATTGGAGCGTGCAATTGCCACTTGGGAAGGTTAGTTAAACTTTATCTTTTCATTTGTTCAAGGTATCCATTATATTGGCTATCAAGAAATCTTCCCTGAGTTGGTAGCAGCAATTATCGTATGTTTAATTCGAGCACTAATTATTATTAGTCTTTTAGTAGATTGACACGTTATAGACTAATCTTGACTGTTTCCAGTTAGTTCATTGAGGGCACGTCATAAATCGGTTTAGAATATTATTCATTTCCTTCAAGTCAGCCTTTATCATCTATACATCATGATAGTCAAATTCAGAATTGACATGTCATGAGCAAGCATTTTTTACTTATTAGTGCATATAGATGCTCTTTTTTGGCAAATTCGCTCCCTACCTGACGCAGAAATCTATTATCACTCATTTGTTTAGTGTTCTTAAACAGTTGCCAAAATCAGGAAAATGTGAATAAGCTGCAGAATACACCTGCTTAATTGAGTGTAACTTGAACCGTTGTAGAATATCATGTGCAACTCTTGTTAAGTTAAATGGCAAGTAAGATAACAAACGGTAAAAGTTTTGTTAAAATGAACTCAAACGATCCCATTTATCACATCATCATCCAGTTGTACACATGCTTCATAAGATGTAGCACTACAGTAACTCACCGAGGACAGATCGGATACTGCAAATCCTTTTTGTGTCTTTTGCCATCTCTACGAACATCTTGGAAAACTAGCTAAGCCTGACACCATATTGAAAAGAACCTTCAATCCACTGTCAATTGTGACTAGCTTGCATTCTTTAACAGAGTTCTATTTTTATGCTCTTATGGTGCTTGTTACGTCTCATTTATAGTTCCAGCTGGGCCCCTGTTCGACTTTTCTGTCCATCTAGTTGATTTATAAACATGTGACAGTATCAAGTTCCTGTTACAAAGGGGTTTACTGGCTTGCGGTTGTTTTTACAGTTCGACTCGGTGCTGCTGCCACTGCTTTCCTTCACAAATTGCAAAAAGGCATACCTCCATGGGTTCCTCTTAAGGGACATGAGAAGAAAACCTACAAGCAACTCCAACAAGAGGCTTTAGAGAGCAAGAGACGGGATCTAGCAGTGCTAGCAGCTAACGACGGTGTTTGGCCTGGAGTGAGAATTCCTAGTCACGCCCTGTTTCTCTGGGCCAGCGGATCTGAGTTGACATCTATTTTGGAGGCAGATCACATGCCAAACAAGTACATTCCTAAGGATCTAAGGTACGTTCATAAACCCAGCATCCTATCTCTACCATTGGAAATACAATCATTTTAGTTATACCTTCACGGTGGTATCTTGAAGACAACGACACTTGAGAGGGTCTTGGTAAAGTCATTGGTGATTGGCAAATGCATATACTGTCCTCTTTAAATAAGACTGTACCATAACAGAAAATGAAATGCTTAGGTGATTTATTTCCTTAAACGGTTCCTTCTATTGTTCTGGATAAAGTTTTCTTCTTGACGTTGTGGTACTTTTTTTTTAATAAATTCTATTTGTAGATTTCTTATTCATTAGATTCTTATACTTGTGTCATGGTTGCCTATGGCAGGTACAAGTTAGCTAAAATTATACCTGGCTTAAGACCCTGGGAGGTTCTCAGTGTGGAGCAGGCGATGGAACAGATAACATATAATGGCGAATGGCATCGTGAACCACTAGGGACATACACGACTGGCCCTCCTTACATCAGGCATTGGAATAAAGATGTCAAGGTACAGTACTTATAATTTCCTATAAGTTTGCTCATCTCAAATTCACCTTTGCCCCTCATCGAGAACGGGAAAAGGAAAAAATAGAGAACATGGAGATGGGTGTCTATATTTTTGTCATGAAACTCTTGCACTTTTCTATATGCAATAGCTGCATAGAAATCTTCTACTAGGTTACTGCAGTTTAAATTTGAATCGGGACAATAGTCGTGCCTTGTAACGAAACCTTTGCCCCTTGCTTGCAGAGAATGTTTAGGATATTCTTCAACCTCAGCACCCGAGTTTACAATAAAATGGAGAGGACAATTCCTGGTTTCAGTAAAATAATGGATAAAGTCCAGGCCGATGCTGCTGCCAGAGATGCTAGGCGGAAGGAGAGGAGGGAGGCGTTGAAGAGAGCCGAATTCGAGAGAATGATCTTCGGCACAGTAAAAAAAGATCAG

mRNA sequence

ATGGCGTCAATCAACTTCAATCCCTTCGAAAACTGGTTCTCCAGACGTCCTAATCCCATCCCTCCCCTCAATCTCACTGCATTTAGAGACTCGTTGTCTCAGAAATCCTCAACGTCCCCAAACTTTGCTTCTACGAGCCTCTCGAATTTCTTCAAGAGGTCGCAGAAACCAAAGAAAGCATCCGACGAACCAGGATACTACGGCAAAATGCTAGAGCAATTCGACTGGGAATGCGACAACTTACCCGATTACAGACACACCCCCGAGGTGGAGAAAATCTTGAACGAAGATCCTGTACTGGATAATAAAGAGAATCCAAGCGAAGAGGAGGTCGAAAAGAACGAGAAGCTATGGAAAGCGTTGCGAGCCAGCCCTGTTGTGCAATTCCTGGAACGTGCGGAGGAAATTGCAGCCAAATACAACGAGTTAGAGCTGAAGGAGAATGAGAATCCATACAGAAATGAGGACAAGAAGCTATGGAGGGCCATTCCTCATGTGCCTGGGCTTGACGGGCGGCCTATGCCGAGGAAAGCAATTAAGACGAAGAGGGAATCCGACGACAAATTTTGGGATTTTGCGAGACAGTTCTTTTTTGGGCTGTGGGGCTTCCGGCAGAGACCATATCCACCTGGTCGCCCGATCGATGTTGCGCAGGCCATTGGGTATAAGCGCCTCGAGAAGCGGTACTATGATTTTATCATGAGGAGTGGAGGTTGGTACTATAAGGATCGGTTGGGTCGTACTCGGGGACCATTGGAACTAATTACTCTTAAAACAGCTTGGGGAGGTGGGATTATTGACAAGGACACATTTATTTGGGGGGAGGACATGGACGAATGGGCTCCAATTCACATGGTTTATGGATTGGAGCGTGCAATTGCCACTTGGGAAGTTCGACTCGGTGCTGCTGCCACTGCTTTCCTTCACAAATTGCAAAAAGGCATACCTCCATGGGTTCCTCTTAAGGGACATGAGAAGAAAACCTACAAGCAACTCCAACAAGAGGCTTTAGAGAGCAAGAGACGGGATCTAGCAGTGCTAGCAGCTAACGACGGTGTTTGGCCTGGAGTGAGAATTCCTAGTCACGCCCTGTTTCTCTGGGCCAGCGGATCTGAGTTGACATCTATTTTGGAGGCAGATCACATGCCAAACAAGTACATTCCTAAGGATCTAAGGTACAAGTTAGCTAAAATTATACCTGGCTTAAGACCCTGGGAGGTTCTCAGTGTGGAGCAGGCGATGGAACAGATAACATATAATGGCGAATGGCATCGTGAACCACTAGGGACATACACGACTGGCCCTCCTTACATCAGGCATTGGAATAAAGATGTCAAGAGAATGTTTAGGATATTCTTCAACCTCAGCACCCGAGTTTACAATAAAATGGAGAGGACAATTCCTGGTTTCAGTAAAATAATGGATAAAGTCCAGGCCGATGCTGCTGCCAGAGATGCTAGGCGGAAGGAGAGGAGGGAGGCGTTGAAGAGAGCCGAATTCGAGAGAATGATCTTCGGCACAGTAAAAAAAGATCAG

Coding sequence (CDS)

ATGGCGTCAATCAACTTCAATCCCTTCGAAAACTGGTTCTCCAGACGTCCTAATCCCATCCCTCCCCTCAATCTCACTGCATTTAGAGACTCGTTGTCTCAGAAATCCTCAACGTCCCCAAACTTTGCTTCTACGAGCCTCTCGAATTTCTTCAAGAGGTCGCAGAAACCAAAGAAAGCATCCGACGAACCAGGATACTACGGCAAAATGCTAGAGCAATTCGACTGGGAATGCGACAACTTACCCGATTACAGACACACCCCCGAGGTGGAGAAAATCTTGAACGAAGATCCTGTACTGGATAATAAAGAGAATCCAAGCGAAGAGGAGGTCGAAAAGAACGAGAAGCTATGGAAAGCGTTGCGAGCCAGCCCTGTTGTGCAATTCCTGGAACGTGCGGAGGAAATTGCAGCCAAATACAACGAGTTAGAGCTGAAGGAGAATGAGAATCCATACAGAAATGAGGACAAGAAGCTATGGAGGGCCATTCCTCATGTGCCTGGGCTTGACGGGCGGCCTATGCCGAGGAAAGCAATTAAGACGAAGAGGGAATCCGACGACAAATTTTGGGATTTTGCGAGACAGTTCTTTTTTGGGCTGTGGGGCTTCCGGCAGAGACCATATCCACCTGGTCGCCCGATCGATGTTGCGCAGGCCATTGGGTATAAGCGCCTCGAGAAGCGGTACTATGATTTTATCATGAGGAGTGGAGGTTGGTACTATAAGGATCGGTTGGGTCGTACTCGGGGACCATTGGAACTAATTACTCTTAAAACAGCTTGGGGAGGTGGGATTATTGACAAGGACACATTTATTTGGGGGGAGGACATGGACGAATGGGCTCCAATTCACATGGTTTATGGATTGGAGCGTGCAATTGCCACTTGGGAAGTTCGACTCGGTGCTGCTGCCACTGCTTTCCTTCACAAATTGCAAAAAGGCATACCTCCATGGGTTCCTCTTAAGGGACATGAGAAGAAAACCTACAAGCAACTCCAACAAGAGGCTTTAGAGAGCAAGAGACGGGATCTAGCAGTGCTAGCAGCTAACGACGGTGTTTGGCCTGGAGTGAGAATTCCTAGTCACGCCCTGTTTCTCTGGGCCAGCGGATCTGAGTTGACATCTATTTTGGAGGCAGATCACATGCCAAACAAGTACATTCCTAAGGATCTAAGGTACAAGTTAGCTAAAATTATACCTGGCTTAAGACCCTGGGAGGTTCTCAGTGTGGAGCAGGCGATGGAACAGATAACATATAATGGCGAATGGCATCGTGAACCACTAGGGACATACACGACTGGCCCTCCTTACATCAGGCATTGGAATAAAGATGTCAAGAGAATGTTTAGGATATTCTTCAACCTCAGCACCCGAGTTTACAATAAAATGGAGAGGACAATTCCTGGTTTCAGTAAAATAATGGATAAAGTCCAGGCCGATGCTGCTGCCAGAGATGCTAGGCGGAAGGAGAGGAGGGAGGCGTTGAAGAGAGCCGAATTCGAGAGAATGATCTTCGGCACAGTAAAAAAAGATCAG

Protein sequence

MASINFNPFENWFSRRPNPIPPLNLTAFRDSLSQKSSTSPNFASTSLSNFFKRSQKPKKASDEPGYYGKMLEQFDWECDNLPDYRHTPEVEKILNEDPVLDNKENPSEEEVEKNEKLWKALRASPVVQFLERAEEIAAKYNELELKENENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIKTKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWYYKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRLGAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIPSHALFLWASGSELTSILEADHMPNKYIPKDLRYKLAKIIPGLRPWEVLSVEQAMEQITYNGEWHREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFSKIMDKVQADAAARDARRKERREALKRAEFERMIFGTVKKDQ

Homology

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BLAST of MS016758 vs. NCBI nr
Match: XP_022145657.1 (protein TIC 56, chloroplastic [Momordica charantia])

HSP 1 Score: 1052.4 bits (2720), Expect = 1.3e-303
Identity = 507/512 (99.02%), Postives = 510/512 (99.61%), Query Frame = 0


Query: 1   MASINFNPFENWFSRRPNPIPPLNLTAFRDSLSQKSSTSPNFASTSLSNFFKRSQKPKKA 60
           MASINFNPFENWFSRRPNPIPPLNLTAFRDSLSQKSSTSPNFASTSLSNFFK+SQKPKKA
Sbjct: 1   MASINFNPFENWFSRRPNPIPPLNLTAFRDSLSQKSSTSPNFASTSLSNFFKKSQKPKKA 60

Query: 61  SDEPGYYGKMLEQFDWECDNLPDYRHTPEVEKILNEDPVLDNKENPSEEEVEKNEKLWKA 120
           SDEPGYYGKMLEQF WECDNLPDYRHTPEVEKILNEDPVLDNKENPSEEEVEKNEKLWKA
Sbjct: 61  SDEPGYYGKMLEQFFWECDNLPDYRHTPEVEKILNEDPVLDNKENPSEEEVEKNEKLWKA 120

Query: 121 LRASPVVQFLERAEEIAAKYNELELKENENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK 180
           LRASPVVQFLERAEEIAAKYNELELKENENPYR+EDKKLWRAIPHVPGLDGRPMPRKAIK
Sbjct: 121 LRASPVVQFLERAEEIAAKYNELELKENENPYRDEDKKLWRAIPHVPGLDGRPMPRKAIK 180

Query: 181 TKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240
           TKRES+DKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY
Sbjct: 181 TKRESEDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240

Query: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
           YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300

Query: 301 GAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
           GAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP
Sbjct: 301 GAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360

Query: 361 SHALFLWASGSELTSILEADHMPNKYIPKDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420
           SHALFLWASGSELTSILEADHMPNKYIPKDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN
Sbjct: 361 SHALFLWASGSELTSILEADHMPNKYIPKDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420

Query: 421 GEWHREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFSKIMDKVQAD 480
           GEWHREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFSKIMDKVQAD
Sbjct: 421 GEWHREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFSKIMDKVQAD 480

Query: 481 AAARDARRKERREALKRAEFERMIFGTVKKDQ 513
           AAARDARRKERREALKRAEFERMIFG VKKDQ
Sbjct: 481 AAARDARRKERREALKRAEFERMIFGRVKKDQ 512

[Close]

BLAST of MS016758 vs. NCBI nr
Match: XP_038905710.1 (protein TIC 56, chloroplastic [Benincasa hispida])

HSP 1 Score: 994.2 bits (2569), Expect = 4.2e-286
Identity = 475/512 (92.77%), Postives = 493/512 (96.29%), Query Frame = 0


Query: 1   MASINFNPFENWFSRRPNPIPPLNLTAFRDSLSQKSSTSPNFASTSLSNFFKRSQKPKKA 60
           MASINFNPFENWFSRRPNPIP  NL AFRDSLSQKSS SPNFAS SLSN FK+ QKP+KA
Sbjct: 1   MASINFNPFENWFSRRPNPIPSHNLIAFRDSLSQKSSPSPNFASRSLSNVFKKRQKPEKA 60

Query: 61  SDEPGYYGKMLEQFDWECDNLPDYRHTPEVEKILNEDPVLDNKENPSEEEVEKNEKLWKA 120
           SDEPGYYGKMLEQF WEC+NLPDYRH PEVEKIL+EDPV +NKENP++EE+EKNEKLWK 
Sbjct: 61  SDEPGYYGKMLEQFYWECENLPDYRHAPEVEKILSEDPVFENKENPTQEELEKNEKLWKG 120

Query: 121 LRASPVVQFLERAEEIAAKYNELELKENENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK 180
           +R SPVV+FLERAEEIAAKYNELELKENENPYR+EDKKLWRAIPHVPGLDGRPMPRKAIK
Sbjct: 121 IRDSPVVKFLERAEEIAAKYNELELKENENPYRDEDKKLWRAIPHVPGLDGRPMPRKAIK 180

Query: 181 TKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240
           TKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY
Sbjct: 181 TKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240

Query: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
           YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300

Query: 301 GAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
           GAAATAFLHKLQKGIPPWVPLKG EKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP
Sbjct: 301 GAAATAFLHKLQKGIPPWVPLKGQEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360

Query: 361 SHALFLWASGSELTSILEADHMPNKYIPKDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420
           SHALFLWASGSELTS LEADHMPNKYIP+DLRYKLAKIIPGLRPWEVLSVEQAMEQITYN
Sbjct: 361 SHALFLWASGSELTSTLEADHMPNKYIPRDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420

Query: 421 GEWHREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFSKIMDKVQAD 480
           GEWHREPLGTYTTGPPYIRHWNKDVKRMFR FF+LSTRVYNKMERTIPGFSKIM+KVQ D
Sbjct: 421 GEWHREPLGTYTTGPPYIRHWNKDVKRMFRTFFSLSTRVYNKMERTIPGFSKIMEKVQGD 480

Query: 481 AAARDARRKERREALKRAEFERMIFGTVKKDQ 513
           AAAR+ARRKERREA+KRAEFER IFG V+ D+
Sbjct: 481 AAARNARRKERREAMKRAEFERKIFGEVRNDR 512

[Close]

BLAST of MS016758 vs. NCBI nr
Match: TYK24935.1 (protein TIC 56 [Cucumis melo var. makuwa])

HSP 1 Score: 931.0 bits (2405), Expect = 4.3e-267
Identity = 439/511 (85.91%), Postives = 474/511 (92.76%), Query Frame = 0


Query: 1   MASINFNPFENWFSRRPNPIPPLNLTAFRDSLSQKSSTSPNFASTSLSNFFKRSQKPKKA 60
           M SINFNPFENWFSRRPNPIPPLNL AFRDSLSQKSSTSPNFAS SLSN FKR +KPKKA
Sbjct: 115 MTSINFNPFENWFSRRPNPIPPLNLFAFRDSLSQKSSTSPNFASISLSNIFKRPRKPKKA 174

Query: 61  SDEPGYYGKMLEQFDWECDNLPDYRHTPEVEKILNEDPVLDNKENPSEEEVEKNEKLWKA 120
           +DEPGYYGKMLEQF WECDNLPDYRHTPEVEKIL+EDPV +NKE P++EE+EKNEKLWKA
Sbjct: 175 TDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILSEDPVFENKETPTQEELEKNEKLWKA 234

Query: 121 LRASPVVQFLERAEEIAAKYNELELKENENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK 180
           +R SPVVQFLERAEEIAAKYNELELK NENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK
Sbjct: 235 MRDSPVVQFLERAEEIAAKYNELELKANENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK 294

Query: 181 TKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240
           T RESDDKFWDFARQFFFGLWGF+QRPYPPGRPIDVAQAIGYKRLEKRYYDFIM+SGGWY
Sbjct: 295 TDRESDDKFWDFARQFFFGLWGFQQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMKSGGWY 354

Query: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
           YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 355 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 414

Query: 301 GAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
           GAAATAFLHKLQKGIPPWVPLKG EKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP
Sbjct: 415 GAAATAFLHKLQKGIPPWVPLKGREKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 474

Query: 361 SHALFLWASGSELTSILEADHMPNKYIPKDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420
           SHALFLWASG ELTS+LE DHMPNKYIP+DLRY+LA++IPGLRPWEVLSVEQAM+QITYN
Sbjct: 475 SHALFLWASGPELTSLLEEDHMPNKYIPRDLRYQLAEVIPGLRPWEVLSVEQAMDQITYN 534

Query: 421 GEWHREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFSKIMDKVQAD 480
           GEWHRE LG+Y+TGPPYIR WNK+ K +   +  +S  V N++ER+IPGF K+M+K++AD
Sbjct: 535 GEWHREALGSYSTGPPYIREWNKNFKHLVNSYIKISASVCNRLERSIPGFDKVMEKIEAD 594

Query: 481 AAARDARRKERREALKRAEFERMIFGTVKKD 512
             AR  RR+ERR+A +RAE +R IF  ++ D
Sbjct: 595 RNARYRRRRERRKARRRAELKRKIFVKLRND 625

[Close]

BLAST of MS016758 vs. NCBI nr
Match: XP_008442373.1 (PREDICTED: protein TIC 56, chloroplastic [Cucumis melo])

HSP 1 Score: 931.0 bits (2405), Expect = 4.3e-267
Identity = 439/511 (85.91%), Postives = 474/511 (92.76%), Query Frame = 0


Query: 1   MASINFNPFENWFSRRPNPIPPLNLTAFRDSLSQKSSTSPNFASTSLSNFFKRSQKPKKA 60
           M SINFNPFENWFSRRPNPIPPLNL AFRDSLSQKSSTSPNFAS SLSN FKR +KPKKA
Sbjct: 1   MTSINFNPFENWFSRRPNPIPPLNLFAFRDSLSQKSSTSPNFASISLSNIFKRPRKPKKA 60

Query: 61  SDEPGYYGKMLEQFDWECDNLPDYRHTPEVEKILNEDPVLDNKENPSEEEVEKNEKLWKA 120
           +DEPGYYGKMLEQF WECDNLPDYRHTPEVEKIL+EDPV +NKE P++EE+EKNEKLWKA
Sbjct: 61  TDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILSEDPVFENKETPTQEELEKNEKLWKA 120

Query: 121 LRASPVVQFLERAEEIAAKYNELELKENENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK 180
           +R SPVVQFLERAEEIAAKYNELELK NENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK
Sbjct: 121 MRDSPVVQFLERAEEIAAKYNELELKANENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK 180

Query: 181 TKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240
           T RESDDKFWDFARQFFFGLWGF+QRPYPPGRPIDVAQAIGYKRLEKRYYDFIM+SGGWY
Sbjct: 181 TDRESDDKFWDFARQFFFGLWGFQQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMKSGGWY 240

Query: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
           YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300

Query: 301 GAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
           GAAATAFLHKLQKGIPPWVPLKG EKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP
Sbjct: 301 GAAATAFLHKLQKGIPPWVPLKGREKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360

Query: 361 SHALFLWASGSELTSILEADHMPNKYIPKDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420
           SHALFLWASG ELTS+LE DHMPNKYIP+DLRY+LA++IPGLRPWEVLSVEQAM+QITYN
Sbjct: 361 SHALFLWASGPELTSLLEEDHMPNKYIPRDLRYQLAEVIPGLRPWEVLSVEQAMDQITYN 420

Query: 421 GEWHREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFSKIMDKVQAD 480
           GEWHRE LG+Y+TGPPYIR WNK+ K +   +  +S  V N++ER+IPGF K+M+K++AD
Sbjct: 421 GEWHREALGSYSTGPPYIREWNKNFKHLVNSYIKISASVCNRLERSIPGFDKVMEKIEAD 480

Query: 481 AAARDARRKERREALKRAEFERMIFGTVKKD 512
             AR  RR+ERR+A +RAE +R IF  ++ D
Sbjct: 481 RNARYRRRRERRKARRRAELKRKIFVKLRND 511

[Close]

BLAST of MS016758 vs. NCBI nr
Match: KAA0044197.1 (protein TIC 56 [Cucumis melo var. makuwa])

HSP 1 Score: 928.7 bits (2399), Expect = 2.2e-266
Identity = 438/511 (85.71%), Postives = 473/511 (92.56%), Query Frame = 0


Query: 1   MASINFNPFENWFSRRPNPIPPLNLTAFRDSLSQKSSTSPNFASTSLSNFFKRSQKPKKA 60
           M SINFNPFENWFSRRPNPIPPLNL AFRDSLSQKSSTSPNFAS SLSN FKR +KPKKA
Sbjct: 115 MTSINFNPFENWFSRRPNPIPPLNLFAFRDSLSQKSSTSPNFASISLSNIFKRPRKPKKA 174

Query: 61  SDEPGYYGKMLEQFDWECDNLPDYRHTPEVEKILNEDPVLDNKENPSEEEVEKNEKLWKA 120
           +DEPGYYGKMLEQF WECDNLPDYRHTPEVEKIL+EDPV +NKE P++EE+EKNEKLWKA
Sbjct: 175 TDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILSEDPVFENKETPTQEELEKNEKLWKA 234

Query: 121 LRASPVVQFLERAEEIAAKYNELELKENENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK 180
           +R SPVVQFLERAEEIAAKYNELELK NENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK
Sbjct: 235 MRDSPVVQFLERAEEIAAKYNELELKANENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK 294

Query: 181 TKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240
           T RESDDKFWDFARQFFFGLWGF+QRPYPPGRPIDVAQAIGYKRLEKRYYDFIM+SGGWY
Sbjct: 295 TDRESDDKFWDFARQFFFGLWGFQQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMKSGGWY 354

Query: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
           YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 355 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 414

Query: 301 GAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
           GAAATAFLHKLQKGIPPWVPLKG EKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP
Sbjct: 415 GAAATAFLHKLQKGIPPWVPLKGREKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 474

Query: 361 SHALFLWASGSELTSILEADHMPNKYIPKDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420
           SHALFLWASG ELTS+LE DHMPNKYIP+DLRY+LA++IPGLRPWEVLSVEQAM+QITYN
Sbjct: 475 SHALFLWASGPELTSLLEEDHMPNKYIPRDLRYQLAEVIPGLRPWEVLSVEQAMDQITYN 534

Query: 421 GEWHREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFSKIMDKVQAD 480
           GEWHRE LG+Y+TGPPYIR WNK+ K +   +  +S  V N++ER+IPGF K+M+K++AD
Sbjct: 535 GEWHREALGSYSTGPPYIREWNKNFKHLVNSYIKISASVCNRLERSIPGFDKVMEKIEAD 594

Query: 481 AAARDARRKERREALKRAEFERMIFGTVKKD 512
             AR  RR+ER +A +RAE +R IF  ++ D
Sbjct: 595 RNARYRRRRERSKARRRAELKRKIFVKLRND 625

[Close]

BLAST of MS016758 vs. ExPASy Swiss-Prot
Match: Q7Y1W1 (Protein TIC 56, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC56 PE=1 SV=1)

HSP 1 Score: 797.0 bits (2057), Expect = 1.3e-229
Identity = 373/513 (72.71%), Postives = 433/513 (84.41%), Query Frame = 0


Query: 1   MASINFNPFENWFSRRPNPIPPLNLTAFRDSLSQKSSTSPNFASTSLSNFFKRSQKPKKA 60
           M+S+NFNPF+NWF + PNP+P +N  +  DS   KS  SPNFAS  L  F K+S KP+ A
Sbjct: 1   MSSMNFNPFQNWFEKPPNPVPSINFVSLADSFFPKSQ-SPNFASIGLPKFSKKSPKPETA 60

Query: 61  -SDEPGYYGKMLEQFDWECDNLPDYRHTPEVEKILNEDPVLDNKENPSEEEVEKNEKLWK 120
            +DEPG Y ++ EQF WEC+N+PDYRHTPEV+K+LNEDPV + KENPS EE+E  +K W+
Sbjct: 61  GTDEPGPYKQIAEQFLWECENIPDYRHTPEVDKLLNEDPVFEKKENPSTEEIEAEQKWWE 120

Query: 121 ALRASPVVQFLERAEEIAAKYNELELKENENPYRNEDKKLWRAIPHVPGLDGRPMPRKAI 180
           + RASPVVQF+ RAEEIA   N++EL++N+ PYR EDK  WRAIPHVPG DGRPMPRKAI
Sbjct: 121 SFRASPVVQFMTRAEEIADDMNKMELEDNDTPYRKEDKDYWRAIPHVPGFDGRPMPRKAI 180

Query: 181 KTKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGW 240
           K+K ESDDKFWDF +QF FGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIM++GGW
Sbjct: 181 KSKEESDDKFWDFMKQFLFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMKTGGW 240

Query: 241 YYKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVR 300
           +YKDRLGR+RGP E+ITLKTA+G GIID+DTFIWGEDMDEWAPIHMVYGLE AIATWEVR
Sbjct: 241 WYKDRLGRSRGPCEIITLKTAYGAGIIDRDTFIWGEDMDEWAPIHMVYGLEPAIATWEVR 300

Query: 301 LGAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRI 360
           LGAAATAFLHKLQKGIPPWVPLKG E KTYKQLQ+EA+ESK+RD+AVL AN GVWPGVR 
Sbjct: 301 LGAAATAFLHKLQKGIPPWVPLKGREPKTYKQLQKEAIESKKRDMAVLEANGGVWPGVRT 360

Query: 361 PSHALFLWASGSELTSILEADHMPNKYIPKDLRYKLAKIIPGLRPWEVLSVEQAMEQITY 420
           PSHALFLWASGSELT++LE+DHMPNK+IPK LR +LAK+IPGLRPWEV+S+EQAM+QI+Y
Sbjct: 361 PSHALFLWASGSELTTVLESDHMPNKFIPKQLRLELAKVIPGLRPWEVISIEQAMDQISY 420

Query: 421 NGEWHREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFSKIMDKVQA 480
            GEW+REPLGTYTTGPPYIR WN+ V R+FRIF+NLS RV  K+ERT+PGF  IMDKVQ 
Sbjct: 421 GGEWYREPLGTYTTGPPYIREWNRSVMRLFRIFYNLSVRVGQKLERTVPGFDTIMDKVQK 480

Query: 481 DAAARDARRKERREALKRAEFERMIFGTVKKDQ 513
           D   R ARR +RRE   R E  +   G   +D+
Sbjct: 481 DYDKRIARRMKRREEELREEDLKHYSGRTDEDE 512

[Close]

BLAST of MS016758 vs. ExPASy TrEMBL
Match: A0A6J1CXB7 (protein TIC 56, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111015055 PE=4 SV=1)

HSP 1 Score: 1052.4 bits (2720), Expect = 6.3e-304
Identity = 507/512 (99.02%), Postives = 510/512 (99.61%), Query Frame = 0


Query: 1   MASINFNPFENWFSRRPNPIPPLNLTAFRDSLSQKSSTSPNFASTSLSNFFKRSQKPKKA 60
           MASINFNPFENWFSRRPNPIPPLNLTAFRDSLSQKSSTSPNFASTSLSNFFK+SQKPKKA
Sbjct: 1   MASINFNPFENWFSRRPNPIPPLNLTAFRDSLSQKSSTSPNFASTSLSNFFKKSQKPKKA 60

Query: 61  SDEPGYYGKMLEQFDWECDNLPDYRHTPEVEKILNEDPVLDNKENPSEEEVEKNEKLWKA 120
           SDEPGYYGKMLEQF WECDNLPDYRHTPEVEKILNEDPVLDNKENPSEEEVEKNEKLWKA
Sbjct: 61  SDEPGYYGKMLEQFFWECDNLPDYRHTPEVEKILNEDPVLDNKENPSEEEVEKNEKLWKA 120

Query: 121 LRASPVVQFLERAEEIAAKYNELELKENENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK 180
           LRASPVVQFLERAEEIAAKYNELELKENENPYR+EDKKLWRAIPHVPGLDGRPMPRKAIK
Sbjct: 121 LRASPVVQFLERAEEIAAKYNELELKENENPYRDEDKKLWRAIPHVPGLDGRPMPRKAIK 180

Query: 181 TKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240
           TKRES+DKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY
Sbjct: 181 TKRESEDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240

Query: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
           YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300

Query: 301 GAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
           GAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP
Sbjct: 301 GAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360

Query: 361 SHALFLWASGSELTSILEADHMPNKYIPKDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420
           SHALFLWASGSELTSILEADHMPNKYIPKDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN
Sbjct: 361 SHALFLWASGSELTSILEADHMPNKYIPKDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420

Query: 421 GEWHREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFSKIMDKVQAD 480
           GEWHREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFSKIMDKVQAD
Sbjct: 421 GEWHREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFSKIMDKVQAD 480

Query: 481 AAARDARRKERREALKRAEFERMIFGTVKKDQ 513
           AAARDARRKERREALKRAEFERMIFG VKKDQ
Sbjct: 481 AAARDARRKERREALKRAEFERMIFGRVKKDQ 512

[Close]

BLAST of MS016758 vs. ExPASy TrEMBL
Match: A0A5D3DMT8 (Protein TIC 56 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00500 PE=4 SV=1)

HSP 1 Score: 931.0 bits (2405), Expect = 2.1e-267
Identity = 439/511 (85.91%), Postives = 474/511 (92.76%), Query Frame = 0


Query: 1   MASINFNPFENWFSRRPNPIPPLNLTAFRDSLSQKSSTSPNFASTSLSNFFKRSQKPKKA 60
           M SINFNPFENWFSRRPNPIPPLNL AFRDSLSQKSSTSPNFAS SLSN FKR +KPKKA
Sbjct: 115 MTSINFNPFENWFSRRPNPIPPLNLFAFRDSLSQKSSTSPNFASISLSNIFKRPRKPKKA 174

Query: 61  SDEPGYYGKMLEQFDWECDNLPDYRHTPEVEKILNEDPVLDNKENPSEEEVEKNEKLWKA 120
           +DEPGYYGKMLEQF WECDNLPDYRHTPEVEKIL+EDPV +NKE P++EE+EKNEKLWKA
Sbjct: 175 TDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILSEDPVFENKETPTQEELEKNEKLWKA 234

Query: 121 LRASPVVQFLERAEEIAAKYNELELKENENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK 180
           +R SPVVQFLERAEEIAAKYNELELK NENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK
Sbjct: 235 MRDSPVVQFLERAEEIAAKYNELELKANENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK 294

Query: 181 TKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240
           T RESDDKFWDFARQFFFGLWGF+QRPYPPGRPIDVAQAIGYKRLEKRYYDFIM+SGGWY
Sbjct: 295 TDRESDDKFWDFARQFFFGLWGFQQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMKSGGWY 354

Query: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
           YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 355 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 414

Query: 301 GAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
           GAAATAFLHKLQKGIPPWVPLKG EKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP
Sbjct: 415 GAAATAFLHKLQKGIPPWVPLKGREKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 474

Query: 361 SHALFLWASGSELTSILEADHMPNKYIPKDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420
           SHALFLWASG ELTS+LE DHMPNKYIP+DLRY+LA++IPGLRPWEVLSVEQAM+QITYN
Sbjct: 475 SHALFLWASGPELTSLLEEDHMPNKYIPRDLRYQLAEVIPGLRPWEVLSVEQAMDQITYN 534

Query: 421 GEWHREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFSKIMDKVQAD 480
           GEWHRE LG+Y+TGPPYIR WNK+ K +   +  +S  V N++ER+IPGF K+M+K++AD
Sbjct: 535 GEWHREALGSYSTGPPYIREWNKNFKHLVNSYIKISASVCNRLERSIPGFDKVMEKIEAD 594

Query: 481 AAARDARRKERREALKRAEFERMIFGTVKKD 512
             AR  RR+ERR+A +RAE +R IF  ++ D
Sbjct: 595 RNARYRRRRERRKARRRAELKRKIFVKLRND 625

[Close]

BLAST of MS016758 vs. ExPASy TrEMBL
Match: A0A1S3B5J8 (protein TIC 56, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486261 PE=4 SV=1)

HSP 1 Score: 931.0 bits (2405), Expect = 2.1e-267
Identity = 439/511 (85.91%), Postives = 474/511 (92.76%), Query Frame = 0


Query: 1   MASINFNPFENWFSRRPNPIPPLNLTAFRDSLSQKSSTSPNFASTSLSNFFKRSQKPKKA 60
           M SINFNPFENWFSRRPNPIPPLNL AFRDSLSQKSSTSPNFAS SLSN FKR +KPKKA
Sbjct: 1   MTSINFNPFENWFSRRPNPIPPLNLFAFRDSLSQKSSTSPNFASISLSNIFKRPRKPKKA 60

Query: 61  SDEPGYYGKMLEQFDWECDNLPDYRHTPEVEKILNEDPVLDNKENPSEEEVEKNEKLWKA 120
           +DEPGYYGKMLEQF WECDNLPDYRHTPEVEKIL+EDPV +NKE P++EE+EKNEKLWKA
Sbjct: 61  TDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILSEDPVFENKETPTQEELEKNEKLWKA 120

Query: 121 LRASPVVQFLERAEEIAAKYNELELKENENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK 180
           +R SPVVQFLERAEEIAAKYNELELK NENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK
Sbjct: 121 MRDSPVVQFLERAEEIAAKYNELELKANENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK 180

Query: 181 TKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240
           T RESDDKFWDFARQFFFGLWGF+QRPYPPGRPIDVAQAIGYKRLEKRYYDFIM+SGGWY
Sbjct: 181 TDRESDDKFWDFARQFFFGLWGFQQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMKSGGWY 240

Query: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
           YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300

Query: 301 GAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
           GAAATAFLHKLQKGIPPWVPLKG EKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP
Sbjct: 301 GAAATAFLHKLQKGIPPWVPLKGREKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360

Query: 361 SHALFLWASGSELTSILEADHMPNKYIPKDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420
           SHALFLWASG ELTS+LE DHMPNKYIP+DLRY+LA++IPGLRPWEVLSVEQAM+QITYN
Sbjct: 361 SHALFLWASGPELTSLLEEDHMPNKYIPRDLRYQLAEVIPGLRPWEVLSVEQAMDQITYN 420

Query: 421 GEWHREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFSKIMDKVQAD 480
           GEWHRE LG+Y+TGPPYIR WNK+ K +   +  +S  V N++ER+IPGF K+M+K++AD
Sbjct: 421 GEWHREALGSYSTGPPYIREWNKNFKHLVNSYIKISASVCNRLERSIPGFDKVMEKIEAD 480

Query: 481 AAARDARRKERREALKRAEFERMIFGTVKKD 512
             AR  RR+ERR+A +RAE +R IF  ++ D
Sbjct: 481 RNARYRRRRERRKARRRAELKRKIFVKLRND 511

[Close]

BLAST of MS016758 vs. ExPASy TrEMBL
Match: A0A5A7TQS2 (Protein TIC 56 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G005560 PE=4 SV=1)

HSP 1 Score: 928.7 bits (2399), Expect = 1.0e-266
Identity = 438/511 (85.71%), Postives = 473/511 (92.56%), Query Frame = 0


Query: 1   MASINFNPFENWFSRRPNPIPPLNLTAFRDSLSQKSSTSPNFASTSLSNFFKRSQKPKKA 60
           M SINFNPFENWFSRRPNPIPPLNL AFRDSLSQKSSTSPNFAS SLSN FKR +KPKKA
Sbjct: 115 MTSINFNPFENWFSRRPNPIPPLNLFAFRDSLSQKSSTSPNFASISLSNIFKRPRKPKKA 174

Query: 61  SDEPGYYGKMLEQFDWECDNLPDYRHTPEVEKILNEDPVLDNKENPSEEEVEKNEKLWKA 120
           +DEPGYYGKMLEQF WECDNLPDYRHTPEVEKIL+EDPV +NKE P++EE+EKNEKLWKA
Sbjct: 175 TDEPGYYGKMLEQFYWECDNLPDYRHTPEVEKILSEDPVFENKETPTQEELEKNEKLWKA 234

Query: 121 LRASPVVQFLERAEEIAAKYNELELKENENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK 180
           +R SPVVQFLERAEEIAAKYNELELK NENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK
Sbjct: 235 MRDSPVVQFLERAEEIAAKYNELELKANENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK 294

Query: 181 TKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240
           T RESDDKFWDFARQFFFGLWGF+QRPYPPGRPIDVAQAIGYKRLEKRYYDFIM+SGGWY
Sbjct: 295 TDRESDDKFWDFARQFFFGLWGFQQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMKSGGWY 354

Query: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
           YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL
Sbjct: 355 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 414

Query: 301 GAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
           GAAATAFLHKLQKGIPPWVPLKG EKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP
Sbjct: 415 GAAATAFLHKLQKGIPPWVPLKGREKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 474

Query: 361 SHALFLWASGSELTSILEADHMPNKYIPKDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420
           SHALFLWASG ELTS+LE DHMPNKYIP+DLRY+LA++IPGLRPWEVLSVEQAM+QITYN
Sbjct: 475 SHALFLWASGPELTSLLEEDHMPNKYIPRDLRYQLAEVIPGLRPWEVLSVEQAMDQITYN 534

Query: 421 GEWHREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFSKIMDKVQAD 480
           GEWHRE LG+Y+TGPPYIR WNK+ K +   +  +S  V N++ER+IPGF K+M+K++AD
Sbjct: 535 GEWHREALGSYSTGPPYIREWNKNFKHLVNSYIKISASVCNRLERSIPGFDKVMEKIEAD 594

Query: 481 AAARDARRKERREALKRAEFERMIFGTVKKD 512
             AR  RR+ER +A +RAE +R IF  ++ D
Sbjct: 595 RNARYRRRRERSKARRRAELKRKIFVKLRND 625

[Close]

BLAST of MS016758 vs. ExPASy TrEMBL
Match: A0A6J1J5K7 (protein TIC 56, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481500 PE=4 SV=1)

HSP 1 Score: 913.7 bits (2360), Expect = 3.5e-262
Identity = 426/502 (84.86%), Postives = 474/502 (94.42%), Query Frame = 0


Query: 1   MASINFNPFENWFSRRPNPIPPLNLTAFRDSLSQKSSTSPNFASTSLSNFFKRSQKPKKA 60
           MASINFNPFENWFSRRPNPI PLNL AFRDSLSQKSSTSPNFAS +LSN FK+ +KP++A
Sbjct: 1   MASINFNPFENWFSRRPNPISPLNLIAFRDSLSQKSSTSPNFASITLSNVFKKQKKPEEA 60

Query: 61  SDEPGYYGKMLEQFDWECDNLPDYRHTPEVEKILNEDPVLDNKENPSEEEVEKNEKLWKA 120
            ++PGYY +ML+QF WEC+NLPDYRHTPEVEKIL+EDPV + KENP+EEE+EKNEKLWKA
Sbjct: 61  PEKPGYYREMLDQFYWECENLPDYRHTPEVEKILSEDPVFEKKENPTEEELEKNEKLWKA 120

Query: 121 LRASPVVQFLERAEEIAAKYNELELKENENPYRNEDKKLWRAIPHVPGLDGRPMPRKAIK 180
           +R SPVVQFLERAE+IAAKYNE+ELKENENPYR ED+KLWRAIPHV GLDGRPMPRKAIK
Sbjct: 121 IRDSPVVQFLERAEKIAAKYNEIELKENENPYRREDRKLWRAIPHVTGLDGRPMPRKAIK 180

Query: 181 TKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGWY 240
           T++ESDDKFWDFARQFF GLWG+RQRPYPPGRPIDVAQAIGYKRLE+RYYDFIM+SGGWY
Sbjct: 181 TRKESDDKFWDFARQFFLGLWGYRQRPYPPGRPIDVAQAIGYKRLEERYYDFIMKSGGWY 240

Query: 241 YKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVRL 300
           YKDRLGRTRGPLELITLKTAWG GIIDKDTFIWGEDMDEWAPIHMVYG+ERAIATWEVRL
Sbjct: 241 YKDRLGRTRGPLELITLKTAWGSGIIDKDTFIWGEDMDEWAPIHMVYGMERAIATWEVRL 300

Query: 301 GAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRIP 360
           GAAATAF+HKLQ+GIPPWVPLKG EKKTYKQLQQEALESKRRDLAVLAANDGVWPGVR P
Sbjct: 301 GAAATAFIHKLQRGIPPWVPLKGQEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRTP 360

Query: 361 SHALFLWASGSELTSILEADHMPNKYIPKDLRYKLAKIIPGLRPWEVLSVEQAMEQITYN 420
           SHALFLWASG+ELT++LEADHMPNKYIP+DLRYKLAKI+PGLRPWEVLSVEQAM+QITY+
Sbjct: 361 SHALFLWASGTELTTLLEADHMPNKYIPRDLRYKLAKILPGLRPWEVLSVEQAMDQITYS 420

Query: 421 GEWHREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFSKIMDKVQAD 480
           G+WHRE LG+YTTGPPYIRHWN DVKR+ R+F NLS RVY+++ER IPGF K+++K QAD
Sbjct: 421 GKWHRERLGSYTTGPPYIRHWNDDVKRLLRLFSNLSARVYSRLERRIPGFDKVVEKAQAD 480

Query: 481 AAARDARRKERREALKRAEFER 503
           AAAR A R E+R+ALKR+++ER
Sbjct: 481 AAARRAARLEKRKALKRSKYER 502

[Close]

BLAST of MS016758 vs. TAIR 10
Match: AT5G01590.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to 59 proteins in 31 species: Archae - 0; Bacteria - 20; Metazoa - 1; Fungi - 2; Plants - 33; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 797.0 bits (2057), Expect = 9.1e-231
Identity = 373/513 (72.71%), Postives = 433/513 (84.41%), Query Frame = 0


Query: 1   MASINFNPFENWFSRRPNPIPPLNLTAFRDSLSQKSSTSPNFASTSLSNFFKRSQKPKKA 60
           M+S+NFNPF+NWF + PNP+P +N  +  DS   KS  SPNFAS  L  F K+S KP+ A
Sbjct: 1   MSSMNFNPFQNWFEKPPNPVPSINFVSLADSFFPKSQ-SPNFASIGLPKFSKKSPKPETA 60

Query: 61  -SDEPGYYGKMLEQFDWECDNLPDYRHTPEVEKILNEDPVLDNKENPSEEEVEKNEKLWK 120
            +DEPG Y ++ EQF WEC+N+PDYRHTPEV+K+LNEDPV + KENPS EE+E  +K W+
Sbjct: 61  GTDEPGPYKQIAEQFLWECENIPDYRHTPEVDKLLNEDPVFEKKENPSTEEIEAEQKWWE 120

Query: 121 ALRASPVVQFLERAEEIAAKYNELELKENENPYRNEDKKLWRAIPHVPGLDGRPMPRKAI 180
           + RASPVVQF+ RAEEIA   N++EL++N+ PYR EDK  WRAIPHVPG DGRPMPRKAI
Sbjct: 121 SFRASPVVQFMTRAEEIADDMNKMELEDNDTPYRKEDKDYWRAIPHVPGFDGRPMPRKAI 180

Query: 181 KTKRESDDKFWDFARQFFFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMRSGGW 240
           K+K ESDDKFWDF +QF FGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIM++GGW
Sbjct: 181 KSKEESDDKFWDFMKQFLFGLWGFRQRPYPPGRPIDVAQAIGYKRLEKRYYDFIMKTGGW 240

Query: 241 YYKDRLGRTRGPLELITLKTAWGGGIIDKDTFIWGEDMDEWAPIHMVYGLERAIATWEVR 300
           +YKDRLGR+RGP E+ITLKTA+G GIID+DTFIWGEDMDEWAPIHMVYGLE AIATWEVR
Sbjct: 241 WYKDRLGRSRGPCEIITLKTAYGAGIIDRDTFIWGEDMDEWAPIHMVYGLEPAIATWEVR 300

Query: 301 LGAAATAFLHKLQKGIPPWVPLKGHEKKTYKQLQQEALESKRRDLAVLAANDGVWPGVRI 360
           LGAAATAFLHKLQKGIPPWVPLKG E KTYKQLQ+EA+ESK+RD+AVL AN GVWPGVR 
Sbjct: 301 LGAAATAFLHKLQKGIPPWVPLKGREPKTYKQLQKEAIESKKRDMAVLEANGGVWPGVRT 360

Query: 361 PSHALFLWASGSELTSILEADHMPNKYIPKDLRYKLAKIIPGLRPWEVLSVEQAMEQITY 420
           PSHALFLWASGSELT++LE+DHMPNK+IPK LR +LAK+IPGLRPWEV+S+EQAM+QI+Y
Sbjct: 361 PSHALFLWASGSELTTVLESDHMPNKFIPKQLRLELAKVIPGLRPWEVISIEQAMDQISY 420

Query: 421 NGEWHREPLGTYTTGPPYIRHWNKDVKRMFRIFFNLSTRVYNKMERTIPGFSKIMDKVQA 480
            GEW+REPLGTYTTGPPYIR WN+ V R+FRIF+NLS RV  K+ERT+PGF  IMDKVQ 
Sbjct: 421 GGEWYREPLGTYTTGPPYIREWNRSVMRLFRIFYNLSVRVGQKLERTVPGFDTIMDKVQK 480

Query: 481 DAAARDARRKERREALKRAEFERMIFGTVKKDQ 513
           D   R ARR +RRE   R E  +   G   +D+
Sbjct: 481 DYDKRIARRMKRREEELREEDLKHYSGRTDEDE 512

The following BLAST results are available for this feature:

BLAST of MS016758 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145657.1	1.3e-303	99.02	protein TIC 56, chloroplastic [Momordica charantia]	[more]
XP_038905710.1	4.2e-286	92.77	protein TIC 56, chloroplastic [Benincasa hispida]	[more]
TYK24935.1	4.3e-267	85.91	protein TIC 56 [Cucumis melo var. makuwa]	[more]
XP_008442373.1	4.3e-267	85.91	PREDICTED: protein TIC 56, chloroplastic [Cucumis melo]	[more]
KAA0044197.1	2.2e-266	85.71	protein TIC 56 [Cucumis melo var. makuwa]	[more]

BLAST of MS016758 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7Y1W1	1.3e-229	72.71	Protein TIC 56, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC56 PE=1 SV=1	[more]

BLAST of MS016758 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CXB7	6.3e-304	99.02	protein TIC 56, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111015055 PE=...	[more]
A0A5D3DMT8	2.1e-267	85.91	Protein TIC 56 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00500...	[more]
A0A1S3B5J8	2.1e-267	85.91	protein TIC 56, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486261 PE=4 SV=1	[more]
A0A5A7TQS2	1.0e-266	85.71	Protein TIC 56 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G00556...	[more]
A0A6J1J5K7	3.5e-262	84.86	protein TIC 56, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481500 PE=4 S...	[more]

BLAST of MS016758 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01590.1	9.1e-231	72.71	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 126..146
IPR025640	GYF domain 2	PFAM	PF14237	GYF_2	coord: 239..289 e-value: 1.3E-10 score: 40.9
IPR037471	Protein TIC56	PANTHER	PTHR37755	PROTEIN TIC 56, CHLOROPLASTIC	coord: 1..511

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS016758.1	MS016758.1	mRNA