MS016713 (gene) Bitter gourd (TR) v1

Overview
NameMS016713
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionjosephin-like protein
Locationscaffold563: 257621 .. 257992 (+)
RNA-Seq ExpressionMS016713
SyntenyMS016713
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGAGGAAATCGAGCAAGCGAGTCAGCTTCAGTCCTGATGTGAATGATAAGCCACCAGTCGTGCTGAAACACAGCGGCAGCGACGGCGGTGGTGGCGCCGGGATGTGGAGCTTCGGCCTGAGCAGAGAGACGAGGTACTTGCCAGTGAGGTTTCTACAGAGCCTCAAGGCCAGGGTAAGTGAAGCCATTCGCTTTGTATCCACCAGAAAATCTTCACGGAAGGTATCTTCAGCCTCCACATTTACAAGGTCAAGGTCAGTCTCGGATTCCATGGACTCCCATCGAGCCGAAGCTATTGAAGATTGCATTGAATTCTTAAACCACTCTTCATCCCTGTCAAGATCAAATTCAGTCTCTGGAAGTAGTTAC

mRNA sequence

ATGTCGAGGAAATCGAGCAAGCGAGTCAGCTTCAGTCCTGATGTGAATGATAAGCCACCAGTCGTGCTGAAACACAGCGGCAGCGACGGCGGTGGTGGCGCCGGGATGTGGAGCTTCGGCCTGAGCAGAGAGACGAGGTACTTGCCAGTGAGGTTTCTACAGAGCCTCAAGGCCAGGGTAAGTGAAGCCATTCGCTTTGTATCCACCAGAAAATCTTCACGGAAGGTATCTTCAGCCTCCACATTTACAAGGTCAAGGTCAGTCTCGGATTCCATGGACTCCCATCGAGCCGAAGCTATTGAAGATTGCATTGAATTCTTAAACCACTCTTCATCCCTGTCAAGATCAAATTCAGTCTCTGGAAGTAGTTAC

Coding sequence (CDS)

ATGTCGAGGAAATCGAGCAAGCGAGTCAGCTTCAGTCCTGATGTGAATGATAAGCCACCAGTCGTGCTGAAACACAGCGGCAGCGACGGCGGTGGTGGCGCCGGGATGTGGAGCTTCGGCCTGAGCAGAGAGACGAGGTACTTGCCAGTGAGGTTTCTACAGAGCCTCAAGGCCAGGGTAAGTGAAGCCATTCGCTTTGTATCCACCAGAAAATCTTCACGGAAGGTATCTTCAGCCTCCACATTTACAAGGTCAAGGTCAGTCTCGGATTCCATGGACTCCCATCGAGCCGAAGCTATTGAAGATTGCATTGAATTCTTAAACCACTCTTCATCCCTGTCAAGATCAAATTCAGTCTCTGGAAGTAGTTAC

Protein sequence

MSRKSSKRVSFSPDVNDKPPVVLKHSGSDGGGGAGMWSFGLSRETRYLPVRFLQSLKARVSEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVSGSSY
Homology
BLAST of MS016713 vs. NCBI nr
Match: XP_022145644.1 (josephin-like protein [Momordica charantia])

HSP 1 Score: 231.5 bits (589), Expect = 4.0e-57
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0

Query: 1   MSRKSSKRVSFSPDVNDKPPVVLKHSGSDGGGGAGMWSFGLSRETRYLPVRFLQSLKARV 60
           MSRKSSKRVSFSPDVNDKPPVVLKHSGSDGGGGAGMWSFGLSRETRYLPVRFLQSLKARV
Sbjct: 1   MSRKSSKRVSFSPDVNDKPPVVLKHSGSDGGGGAGMWSFGLSRETRYLPVRFLQSLKARV 60

Query: 61  SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS 120
           SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS
Sbjct: 61  SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS 120

Query: 121 GSSY 125
           GSSY
Sbjct: 121 GSSY 124

BLAST of MS016713 vs. NCBI nr
Match: XP_008442460.1 (PREDICTED: josephin-like protein [Cucumis melo] >KAA0044156.1 josephin-like protein [Cucumis melo var. makuwa] >TYK24979.1 josephin-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 213.4 bits (542), Expect = 1.1e-51
Identity = 117/124 (94.35%), Postives = 120/124 (96.77%), Query Frame = 0

Query: 1   MSRKSSKRVSFSPDVNDKPPVVLKHSGSDGGGGAGMWSFGLSRETRYLPVRFLQSLKARV 60
           MSRK+SKRVSFSPDVNDKP VVLKH G+ G GGAGMWSFGLSRETRYLPVRFLQSLKARV
Sbjct: 1   MSRKASKRVSFSPDVNDKPTVVLKH-GNGGDGGAGMWSFGLSRETRYLPVRFLQSLKARV 60

Query: 61  SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS 120
           SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS
Sbjct: 61  SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS 120

Query: 121 GSSY 125
           GS+Y
Sbjct: 121 GSTY 123

BLAST of MS016713 vs. NCBI nr
Match: XP_038903233.1 (josephin-like protein [Benincasa hispida])

HSP 1 Score: 211.5 bits (537), Expect = 4.3e-51
Identity = 115/124 (92.74%), Postives = 119/124 (95.97%), Query Frame = 0

Query: 1   MSRKSSKRVSFSPDVNDKPPVVLKHSGSDGGGGAGMWSFGLSRETRYLPVRFLQSLKARV 60
           MSRK+SKRVSFSPDVNDKP VVLKH G D  GGAG+WSFGLSR+TRYLPVRFLQSLKARV
Sbjct: 1   MSRKASKRVSFSPDVNDKPTVVLKHGGGD--GGAGIWSFGLSRDTRYLPVRFLQSLKARV 60

Query: 61  SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS 120
           SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS
Sbjct: 61  SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS 120

Query: 121 GSSY 125
           GS+Y
Sbjct: 121 GSTY 122

BLAST of MS016713 vs. NCBI nr
Match: XP_004137733.1 (josephin-like protein [Cucumis sativus] >KGN58786.1 hypothetical protein Csa_001490 [Cucumis sativus])

HSP 1 Score: 209.5 bits (532), Expect = 1.6e-50
Identity = 115/124 (92.74%), Postives = 118/124 (95.16%), Query Frame = 0

Query: 1   MSRKSSKRVSFSPDVNDKPPVVLKHSGSDGGGGAGMWSFGLSRETRYLPVRFLQSLKARV 60
           MSRK+SKRVSFSPDVNDKP VVLKH G  G GGAGMWSFGLSRETRYLPVRFLQSLK RV
Sbjct: 1   MSRKASKRVSFSPDVNDKPTVVLKHGGG-GDGGAGMWSFGLSRETRYLPVRFLQSLKNRV 60

Query: 61  SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS 120
           SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSM+SHRAEAIEDCIEFLNHSSSLSRSNSVS
Sbjct: 61  SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMESHRAEAIEDCIEFLNHSSSLSRSNSVS 120

Query: 121 GSSY 125
           GS+Y
Sbjct: 121 GSTY 123

BLAST of MS016713 vs. NCBI nr
Match: KAG6580487.1 (hypothetical protein SDJN03_20489, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 201.4 bits (511), Expect = 4.4e-48
Identity = 112/126 (88.89%), Postives = 118/126 (93.65%), Query Frame = 0

Query: 1   MSRKSSKRVSFSPDVNDKPPVVLKHSGSDGGGGAGMWSFGLSRETRYLPVRFLQSLKARV 60
           MSRK+SKRVSFSPDVNDKP V+LKH G D  GGAG+WSF LSR+TRYLPVRFLQSLKA+V
Sbjct: 1   MSRKASKRVSFSPDVNDKPTVLLKHGGRD--GGAGIWSFSLSRDTRYLPVRFLQSLKAKV 60

Query: 61  SEAIRFVSTRKSSRKVSSA--STFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNS 120
           SEAIRFVSTRKSSRKVSSA  STFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNS
Sbjct: 61  SEAIRFVSTRKSSRKVSSASTSTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNS 120

Query: 121 VSGSSY 125
           VSGS+Y
Sbjct: 121 VSGSTY 124

BLAST of MS016713 vs. ExPASy Swiss-Prot
Match: O82391 (Josephin-like protein OS=Arabidopsis thaliana OX=3702 GN=At2g29640 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 4.1e-04
Identity = 32/89 (35.96%), Postives = 46/89 (51.69%), Query Frame = 0

Query: 41  LSRETRYLPVRFLQSLKARVSEAIRFVSTRKSSRKVSSASTFTRSRSVSD-------SMD 100
           L R+T     R ++ L  +    +R V  RK  +K S       S  +S        + +
Sbjct: 270 LPRKTECTAARLIKDLSCKFVMGLRLVVMRKKKKKRSPPLKKASSSGISQPSVISVVNDN 329

Query: 101 SHRAEAIEDCIEFLNHSSSLSRSNSVSGS 123
           +HR+ AIEDCI+F+N SSS +RSNS  GS
Sbjct: 330 NHRSAAIEDCIQFINSSSSFTRSNSTCGS 358

BLAST of MS016713 vs. ExPASy TrEMBL
Match: A0A6J1CVV1 (josephin-like protein OS=Momordica charantia OX=3673 GN=LOC111015044 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.9e-57
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0

Query: 1   MSRKSSKRVSFSPDVNDKPPVVLKHSGSDGGGGAGMWSFGLSRETRYLPVRFLQSLKARV 60
           MSRKSSKRVSFSPDVNDKPPVVLKHSGSDGGGGAGMWSFGLSRETRYLPVRFLQSLKARV
Sbjct: 1   MSRKSSKRVSFSPDVNDKPPVVLKHSGSDGGGGAGMWSFGLSRETRYLPVRFLQSLKARV 60

Query: 61  SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS 120
           SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS
Sbjct: 61  SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS 120

Query: 121 GSSY 125
           GSSY
Sbjct: 121 GSSY 124

BLAST of MS016713 vs. ExPASy TrEMBL
Match: A0A5D3DNT5 (Josephin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00960 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 5.4e-52
Identity = 117/124 (94.35%), Postives = 120/124 (96.77%), Query Frame = 0

Query: 1   MSRKSSKRVSFSPDVNDKPPVVLKHSGSDGGGGAGMWSFGLSRETRYLPVRFLQSLKARV 60
           MSRK+SKRVSFSPDVNDKP VVLKH G+ G GGAGMWSFGLSRETRYLPVRFLQSLKARV
Sbjct: 1   MSRKASKRVSFSPDVNDKPTVVLKH-GNGGDGGAGMWSFGLSRETRYLPVRFLQSLKARV 60

Query: 61  SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS 120
           SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS
Sbjct: 61  SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS 120

Query: 121 GSSY 125
           GS+Y
Sbjct: 121 GSTY 123

BLAST of MS016713 vs. ExPASy TrEMBL
Match: A0A1S3B5Q5 (josephin-like protein OS=Cucumis melo OX=3656 GN=LOC103486317 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 5.4e-52
Identity = 117/124 (94.35%), Postives = 120/124 (96.77%), Query Frame = 0

Query: 1   MSRKSSKRVSFSPDVNDKPPVVLKHSGSDGGGGAGMWSFGLSRETRYLPVRFLQSLKARV 60
           MSRK+SKRVSFSPDVNDKP VVLKH G+ G GGAGMWSFGLSRETRYLPVRFLQSLKARV
Sbjct: 1   MSRKASKRVSFSPDVNDKPTVVLKH-GNGGDGGAGMWSFGLSRETRYLPVRFLQSLKARV 60

Query: 61  SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS 120
           SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS
Sbjct: 61  SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS 120

Query: 121 GSSY 125
           GS+Y
Sbjct: 121 GSTY 123

BLAST of MS016713 vs. ExPASy TrEMBL
Match: A0A0A0LFD2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G732440 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 7.8e-51
Identity = 115/124 (92.74%), Postives = 118/124 (95.16%), Query Frame = 0

Query: 1   MSRKSSKRVSFSPDVNDKPPVVLKHSGSDGGGGAGMWSFGLSRETRYLPVRFLQSLKARV 60
           MSRK+SKRVSFSPDVNDKP VVLKH G  G GGAGMWSFGLSRETRYLPVRFLQSLK RV
Sbjct: 1   MSRKASKRVSFSPDVNDKPTVVLKHGGG-GDGGAGMWSFGLSRETRYLPVRFLQSLKNRV 60

Query: 61  SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS 120
           SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSM+SHRAEAIEDCIEFLNHSSSLSRSNSVS
Sbjct: 61  SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMESHRAEAIEDCIEFLNHSSSLSRSNSVS 120

Query: 121 GSSY 125
           GS+Y
Sbjct: 121 GSTY 123

BLAST of MS016713 vs. ExPASy TrEMBL
Match: A0A6J1I1K7 (uncharacterized protein LOC111470059 OS=Cucurbita maxima OX=3661 GN=LOC111470059 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.8e-45
Identity = 106/124 (85.48%), Postives = 113/124 (91.13%), Query Frame = 0

Query: 1   MSRKSSKRVSFSPDVNDKPPVVLKHSGSDGGGGAGMWSFGLSRETRYLPVRFLQSLKARV 60
           M+RKSSKRVSFSPDVND P VVLKH G D   GAG+ SFGLSR+TR+LPV FLQS KARV
Sbjct: 1   MTRKSSKRVSFSPDVNDNPTVVLKHGGGD--DGAGILSFGLSRDTRHLPVGFLQSFKARV 60

Query: 61  SEAIRFVSTRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLNHSSSLSRSNSVS 120
           SEAIRFVSTRKSSRKVSSA+TFTRSRSVSDSM+SHRAEAIEDCIEFLNHSSSLSR NSVS
Sbjct: 61  SEAIRFVSTRKSSRKVSSAATFTRSRSVSDSMESHRAEAIEDCIEFLNHSSSLSRLNSVS 120

Query: 121 GSSY 125
           GS+Y
Sbjct: 121 GSTY 122

BLAST of MS016713 vs. TAIR 10
Match: AT5G01225.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09032.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 75.1 bits (183), Expect = 4.4e-14
Identity = 59/132 (44.70%), Postives = 79/132 (59.85%), Query Frame = 0

Query: 1   MSRKSSKRVSFSPDVNDKPPVVL-KHSGSDGGGG---AGMWSFGLSRETRYLPVRFLQSL 60
           MSR++SKRV FSPD      ++   HS S  G      G++SF  S ++     R L+S+
Sbjct: 1   MSRRASKRVRFSPDPEANDELIFPTHSSSRHGRRRVVVGIFSFSFS-DSPATTKRLLRSI 60

Query: 61  KARVSEAIRFVS--------TRKSSRKVSSASTFTRSRSVSDSMDSHRAEAIEDCIEFLN 120
             RV +  R++S        T  SS  VSS+    +S+S++ S +SHRAEAIEDCIEFLN
Sbjct: 61  GDRVGKTFRYISFGRMNTKTTPSSSSNVSSSLYLMKSKSLNGS-ESHRAEAIEDCIEFLN 120

BLAST of MS016713 vs. TAIR 10
Match: AT3G09032.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01225.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 2.4e-12
Identity = 60/146 (41.10%), Postives = 80/146 (54.79%), Query Frame = 0

Query: 1   MSRKSSKRVSFSPDVN-DKPPVVLKHSGSDGGGGA-------GMWSFGLSRETRYLPV-- 60
           MSR++ KRVSF+P+      P+  KH G      +       G+ SFGL    R  P   
Sbjct: 1   MSRRACKRVSFNPNPEATDEPIFPKHDGLSSSHHSRRRVVLVGILSFGL----RSSPAAR 60

Query: 61  RFLQSLKARVSEAIRFVSTRK----------------SSRKVSSASTFTRSRSVSDSMDS 120
           + +Q + AR ++ +RF+S R+                SS   SSA    RS+SV+++ +S
Sbjct: 61  KLIQRIGARFAKTLRFISFRRNTTDRRKTSSFLLPSSSSSSSSSAIYMKRSKSVNET-ES 120

BLAST of MS016713 vs. TAIR 10
Match: AT1G07300.1 (josephin protein-related )

HSP 1 Score: 53.9 bits (128), Expect = 1.1e-07
Identity = 35/84 (41.67%), Postives = 51/84 (60.71%), Query Frame = 0

Query: 41  LSRETRYLPVRFLQSLKARVSEAIRFVSTRKSSR----KVSSASTFTRSRSVSDSMDSHR 100
           L R+T     + ++ L  + ++ +R V  RK  R    KVSS S  ++   +  + DSHR
Sbjct: 45  LPRKTEVTAAKLIKHLGCKFAKGLRLVVMRKKKRSPPSKVSSFSGRSQPPIIPINNDSHR 104

Query: 101 AEAIEDCIEFLNHSSSLSRSNSVS 121
           +EAIEDCI+F+N SSS +RSNS S
Sbjct: 105 SEAIEDCIQFINSSSSFTRSNSTS 128

BLAST of MS016713 vs. TAIR 10
Match: AT2G29640.1 (JOSEPHIN-like protein )

HSP 1 Score: 45.8 bits (107), Expect = 2.9e-05
Identity = 32/89 (35.96%), Postives = 46/89 (51.69%), Query Frame = 0

Query: 41  LSRETRYLPVRFLQSLKARVSEAIRFVSTRKSSRKVSSASTFTRSRSVSD-------SMD 100
           L R+T     R ++ L  +    +R V  RK  +K S       S  +S        + +
Sbjct: 270 LPRKTECTAARLIKDLSCKFVMGLRLVVMRKKKKKRSPPLKKASSSGISQPSVISVVNDN 329

Query: 101 SHRAEAIEDCIEFLNHSSSLSRSNSVSGS 123
           +HR+ AIEDCI+F+N SSS +RSNS  GS
Sbjct: 330 NHRSAAIEDCIQFINSSSSFTRSNSTCGS 358

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022145644.14.0e-57100.00josephin-like protein [Momordica charantia][more]
XP_008442460.11.1e-5194.35PREDICTED: josephin-like protein [Cucumis melo] >KAA0044156.1 josephin-like prot... [more]
XP_038903233.14.3e-5192.74josephin-like protein [Benincasa hispida][more]
XP_004137733.11.6e-5092.74josephin-like protein [Cucumis sativus] >KGN58786.1 hypothetical protein Csa_001... [more]
KAG6580487.14.4e-4888.89hypothetical protein SDJN03_20489, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
O823914.1e-0435.96Josephin-like protein OS=Arabidopsis thaliana OX=3702 GN=At2g29640 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1CVV11.9e-57100.00josephin-like protein OS=Momordica charantia OX=3673 GN=LOC111015044 PE=4 SV=1[more]
A0A5D3DNT55.4e-5294.35Josephin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35... [more]
A0A1S3B5Q55.4e-5294.35josephin-like protein OS=Cucumis melo OX=3656 GN=LOC103486317 PE=4 SV=1[more]
A0A0A0LFD27.8e-5192.74Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G732440 PE=4 SV=1[more]
A0A6J1I1K73.8e-4585.48uncharacterized protein LOC111470059 OS=Cucurbita maxima OX=3661 GN=LOC111470059... [more]
Match NameE-valueIdentityDescription
AT5G01225.14.4e-1444.70unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G09032.12.4e-1241.10unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G07300.11.1e-0741.67josephin protein-related [more]
AT2G29640.12.9e-0535.96JOSEPHIN-like protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availablePANTHERPTHR34355:SF1JOSEPHIN-LIKE PROTEINcoord: 1..123
NoneNo IPR availablePANTHERPTHR34355JOSEPHIN-LIKE PROTEINcoord: 1..123

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS016713.1MS016713.1mRNA