MS016680 (gene) Bitter gourd (TR) v1

Overview


Name	MS016680
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Dynein light chain
Location	scaffold563: 55065 .. 56012 (+)
RNA-Seq Expression	MS016680
Synteny	MS016680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGAGGGCAAAGCTGTGGTCCGCGAAACAGACATGCCAGAGGGGATCCAGAGCCATGTCCTTGAGTTGGCTTATAAAGCACTTGATCATCACGAAGTTTCCGACTGTCAATCCATTGCCCGTTTTATCAAACAGGTTTAACATTCAGAATCTTCTTTATGTAGTGATTTATATTTCTATTCTATTAATTAATAGTATCCTCTTTTTCCCTTTTTTTTTTTCAAAAAAAGAAGACGAGTCCTTTCATTGCAATAATAGATTAAAAAGATTCATTTTCCTAACCTGTAAAAGTTGCTGATACCCTTTTAAGATATAAAGAAGATATGCCTCATCATTCACAGTAACCTCATCAATAAACAAAGTTACCTTTCCCTTTTTAAAATATTCGAGTGTATGTCATTTTCAGATACTATAAGTTTCTACACACACAAACATAGATGACCTATGTACACGTCATCCACCAATCTGATCTGATGAGACTAAATCTGGAATATACTTTGTGTGGATGATGTTTGAATCAACTTGTCTGAAAGAGTAAAGGGACATCATTTTGAATGAAATGACTCAGAAGTTCCCATGTTCATCATTTCTTTCTTTTCGCTGGTTTGTGAACCATCTCAGTATAATATGGAGAAAGAGCTGCTGATATCAAATTATATAATATTGAATGGACCAACCCGTGACACTGTTAATGAAAGATTACAAAATAGTATCTGTAATAAACTGCATACTGATATTACTTTGAGCTTTGACAATTAGAGATTTGACGAAGCTTATGGCCCGGCATGGCACTGTGTTGTGGGAAAAGCTTTTGGAGGTTGCATTACACATTTGTGTGGGAGTTTCATCTTCTTCCATGTGGATATAATGGAGTTTCTCATCTTCAAGGACGGAAGAGACTTCTCCAAAAGCATTGAAGAAACCTTAGGAGTGCGCCAGAAAAGT

mRNA sequence

ATGTTGGAGGGCAAAGCTGTGGTCCGCGAAACAGACATGCCAGAGGGGATCCAGAGCCATGTCCTTGAGTTGGCTTATAAAGCACTTGATCATCACGAAGTTTCCGACTGTCAATCCATTGCCCGTTTTATCAAACAGAGATTTGACGAAGCTTATGGCCCGGCATGGCACTGTGTTGTGGGAAAAGCTTTTGGAGGTTGCATTACACATTTGTGTGGGAGTTTCATCTTCTTCCATGTGGATATAATGGAGTTTCTCATCTTCAAGGACGGAAGAGACTTCTCCAAAAGCATTGAAGAAACCTTAGGAGTGCGCCAGAAAAGT

Coding sequence (CDS)

ATGTTGGAGGGCAAAGCTGTGGTCCGCGAAACAGACATGCCAGAGGGGATCCAGAGCCATGTCCTTGAGTTGGCTTATAAAGCACTTGATCATCACGAAGTTTCCGACTGTCAATCCATTGCCCGTTTTATCAAACAGAGATTTGACGAAGCTTATGGCCCGGCATGGCACTGTGTTGTGGGAAAAGCTTTTGGAGGTTGCATTACACATTTGTGTGGGAGTTTCATCTTCTTCCATGTGGATATAATGGAGTTTCTCATCTTCAAGGACGGAAGAGACTTCTCCAAAAGCATTGAAGAAACCTTAGGAGTGCGCCAGAAAAGT

Protein sequence

MLEGKAVVRETDMPEGIQSHVLELAYKALDHHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHLCGSFIFFHVDIMEFLIFKDGRDFSKSIEETLGVRQKS

Homology

[Close]

BLAST of MS016680 vs. NCBI nr
Match: XP_022145583.1 (dynein light chain-like [Momordica charantia])

HSP 1 Score: 225.7 bits (574), Expect = 1.9e-55
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MLEGKAVVRETDMPEGIQSHVLELAYKALDHHEVSDCQSIARFIKQRFDEAYGPAWHCVV 60
           MLEGKA VRETDMPEGIQSHVLELAYKALDHHEVSDCQSIARFIKQRFDEAYGPAWHCVV
Sbjct: 1   MLEGKAAVRETDMPEGIQSHVLELAYKALDHHEVSDCQSIARFIKQRFDEAYGPAWHCVV 60

Query: 61  GKAFGGCITHLCGSFIFFHVDIMEFLIFKDGRDFSKSIEETLGVRQKS 109
           GKAFGGCITHLCGSFIFFHVDIMEFLIFKDGRDFSKSIEETLGVRQKS
Sbjct: 61  GKAFGGCITHLCGSFIFFHVDIMEFLIFKDGRDFSKSIEETLGVRQKS 108

[Close]

BLAST of MS016680 vs. NCBI nr
Match: XP_008442502.1 (PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo])

HSP 1 Score: 206.5 bits (524), Expect = 1.2e-49
Identity = 96/107 (89.72%), Postives = 101/107 (94.39%), Query Frame = 0


Query: 1   MLEGKAVVRETDMPEGIQSHVLELAYKALDHHEVSDCQSIARFIKQRFDEAYGPAWHCVV 60
           MLEGKAVVRETDMP+GIQSHVLELAYKALD HEVSDCQSIA FIKQRFDEAYGPAWHCV 
Sbjct: 1   MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVA 60

Query: 61  GKAFGGCITHLCGSFIFFHVDIMEFLIFKDGRDFSKSIEETLGVRQK 108
           GKAFGGCITHLCGSFIFFHVD MEFL+FKDGRD SKS+EET+GV +K
Sbjct: 61  GKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCSKSVEETVGVCRK 107

[Close]

BLAST of MS016680 vs. NCBI nr
Match: KGN58830.1 (hypothetical protein Csa_001625 [Cucumis sativus])

HSP 1 Score: 203.0 bits (515), Expect = 1.3e-48
Identity = 94/107 (87.85%), Postives = 100/107 (93.46%), Query Frame = 0


Query: 1   MLEGKAVVRETDMPEGIQSHVLELAYKALDHHEVSDCQSIARFIKQRFDEAYGPAWHCVV 60
           MLEGKAVVRETDMP+GIQSHVLELAYKALD HEVSDCQSIA FIKQRFDEAYGPAWHCV 
Sbjct: 1   MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVA 60

Query: 61  GKAFGGCITHLCGSFIFFHVDIMEFLIFKDGRDFSKSIEETLGVRQK 108
           GKAFGGCITHLCGS+IFFHVD MEFL+FKDGRD  KS+EET+GV +K
Sbjct: 61  GKAFGGCITHLCGSYIFFHVDTMEFLVFKDGRDCFKSVEETVGVCRK 107

[Close]

BLAST of MS016680 vs. NCBI nr
Match: PON90790.1 (Dynein light chain [Trema orientale])

HSP 1 Score: 188.7 bits (478), Expect = 2.6e-44
Identity = 85/108 (78.70%), Postives = 100/108 (92.59%), Query Frame = 0


Query: 1   MLEGKAVVRETDMPEGIQSHVLELAYKALDHHEVSDCQSIARFIKQRFDEAYGPAWHCVV 60
           MLEGKAVVRETDMPE +QSHV+ELAYKALD HEVSDCQSIA +IKQ+FDE YGPAW+CVV
Sbjct: 1   MLEGKAVVRETDMPEAMQSHVMELAYKALDLHEVSDCQSIANYIKQKFDEEYGPAWNCVV 60

Query: 61  GKAFGGCITHLCGSFIFFHVDIMEFLIFKDGRDFSKSIEETLGVRQKS 109
           GK FG CITHLCGSFIFFHV++MEFLIFKDG+DF+++++E +GV QK+
Sbjct: 61  GKDFGSCITHLCGSFIFFHVEMMEFLIFKDGKDFNETMDEAIGVLQKA 108

[Close]

BLAST of MS016680 vs. NCBI nr
Match: KAA8518956.1 (hypothetical protein F0562_016270 [Nyssa sinensis])

HSP 1 Score: 185.7 bits (470), Expect = 2.2e-43
Identity = 84/107 (78.50%), Postives = 96/107 (89.72%), Query Frame = 0


Query: 1   MLEGKAVVRETDMPEGIQSHVLELAYKALDHHEVSDCQSIARFIKQRFDEAYGPAWHCVV 60
           MLEGKAV+RETDMPE +QSHV+ELAY+ALD HE SDCQSIA +IKQ+FDEAYGPAWHCVV
Sbjct: 1   MLEGKAVLRETDMPEALQSHVMELAYQALDLHEASDCQSIAHYIKQKFDEAYGPAWHCVV 60

Query: 61  GKAFGGCITHLCGSFIFFHVDIMEFLIFKDGRDFSKSIEETLGVRQK 108
           GK FG CITHLCGSFIFF VD+MEFL+FKDG+D ++S EE +GV QK
Sbjct: 61  GKDFGSCITHLCGSFIFFRVDMMEFLVFKDGKDLTESKEEAIGVLQK 107

[Close]

BLAST of MS016680 vs. ExPASy Swiss-Prot
Match: Q94758 (Dynein light chain OS=Schistosoma mansoni OX=6183 GN=DLC PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.5e-15
Identity = 39/91 (42.86%), Postives = 57/91 (62.64%), Query Frame = 0


Query: 1  MLEGKAVVRETDMPEGIQSHVLELAYKALDHHEVSDCQSIARFIKQRFDEAYGPAWHCVV 60
          M E KAV++  DM E +Q   + +A  A+D H++   + IA  IK+ FD  Y P WHC+V
Sbjct: 1  MSERKAVIKNADMSEEMQEDAIHIAAGAIDKHDLE--KDIAANIKKDFDRKYHPTWHCIV 60

Query: 61 GKAFGGCITHLCGSFIFFHVDIMEFLIFKDG 92
          G+ FG  +TH   +FI+F++D   FL+FK G
Sbjct: 61 GRHFGSYVTHETHNFIYFYLDDRAFLLFKSG 89

[Close]

BLAST of MS016680 vs. ExPASy Swiss-Prot
Match: Q94748 (Probable dynein light chain OS=Schistosoma mansoni OX=6183 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.4e-15
Identity = 39/91 (42.86%), Postives = 55/91 (60.44%), Query Frame = 0


Query: 1  MLEGKAVVRETDMPEGIQSHVLELAYKALDHHEVSDCQSIARFIKQRFDEAYGPAWHCVV 60
          M E KAV++  DM E +Q   +  A  ALD +E+   + +A +IK+ FD  Y P WHC+V
Sbjct: 1  MGERKAVIKNADMHEDMQETAVHTAAAALDKYEIE--KDVAAYIKKEFDRKYNPNWHCIV 60

Query: 61 GKAFGGCITHLCGSFIFFHVDIMEFLIFKDG 92
          GK FG  +TH    FI+F++    FL+FK G
Sbjct: 61 GKHFGSYVTHETQHFIYFYLQERAFLLFKSG 89

[Close]

BLAST of MS016680 vs. ExPASy Swiss-Prot
Match: O02414 (Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=1043166 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 4.4e-15
Identity = 37/91 (40.66%), Postives = 57/91 (62.64%), Query Frame = 0


Query: 1  MLEGKAVVRETDMPEGIQSHVLELAYKALDHHEVSDCQSIARFIKQRFDEAYGPAWHCVV 60
          M E KAV++  DMPE +Q   ++ A +AL+   +   + IA +IK+ FD+ Y P WHC+V
Sbjct: 1  MSERKAVIKNADMPEDMQQDAVDCATQALEKFNIE--KDIAAYIKKEFDKKYNPTWHCIV 60

Query: 61 GKAFGGCITHLCGSFIFFHVDIMEFLIFKDG 92
          G+ FG  +TH    FI+F++  +  L+FK G
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 89

[Close]

BLAST of MS016680 vs. ExPASy Swiss-Prot
Match: O96860 (Dynein light chain 2, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=Cdlc2 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.7e-14
Identity = 36/91 (39.56%), Postives = 57/91 (62.64%), Query Frame = 0


Query: 1  MLEGKAVVRETDMPEGIQSHVLELAYKALDHHEVSDCQSIARFIKQRFDEAYGPAWHCVV 60
          M + KAV++  DM E +Q   ++ A +AL+ + +   + IA FIK+ FD+ Y P WHC+V
Sbjct: 1  MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIE--KDIAAFIKKEFDKKYNPTWHCIV 60

Query: 61 GKAFGGCITHLCGSFIFFHVDIMEFLIFKDG 92
          G+ FG  +TH    FI+F++  +  L+FK G
Sbjct: 61 GRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of MS016680 vs. ExPASy Swiss-Prot
Match: Q22799 (Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.2e-14
Identity = 34/91 (37.36%), Postives = 58/91 (63.74%), Query Frame = 0


Query: 1  MLEGKAVVRETDMPEGIQSHVLELAYKALDHHEVSDCQSIARFIKQRFDEAYGPAWHCVV 60
          M++ KAV++  DM + +Q   ++ A +AL+ + +   + IA +IK+ FD+ Y P WHC+V
Sbjct: 1  MVDRKAVIKNADMSDDMQQDAIDCATQALEKYNIE--KDIAAYIKKEFDKKYNPTWHCIV 60

Query: 61 GKAFGGCITHLCGSFIFFHVDIMEFLIFKDG 92
          G+ FG  +TH    FI+F++  +  L+FK G
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of MS016680 vs. ExPASy TrEMBL
Match: A0A6J1CWC6 (Dynein light chain OS=Momordica charantia OX=3673 GN=LOC111015000 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 9.2e-56
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 1   MLEGKAVVRETDMPEGIQSHVLELAYKALDHHEVSDCQSIARFIKQRFDEAYGPAWHCVV 60
           MLEGKA VRETDMPEGIQSHVLELAYKALDHHEVSDCQSIARFIKQRFDEAYGPAWHCVV
Sbjct: 1   MLEGKAAVRETDMPEGIQSHVLELAYKALDHHEVSDCQSIARFIKQRFDEAYGPAWHCVV 60

Query: 61  GKAFGGCITHLCGSFIFFHVDIMEFLIFKDGRDFSKSIEETLGVRQKS 109
           GKAFGGCITHLCGSFIFFHVDIMEFLIFKDGRDFSKSIEETLGVRQKS
Sbjct: 61  GKAFGGCITHLCGSFIFFHVDIMEFLIFKDGRDFSKSIEETLGVRQKS 108

[Close]

BLAST of MS016680 vs. ExPASy TrEMBL
Match: A0A1S3B5U2 (Dynein light chain OS=Cucumis melo OX=3656 GN=LOC103486353 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 5.8e-50
Identity = 96/107 (89.72%), Postives = 101/107 (94.39%), Query Frame = 0


Query: 1   MLEGKAVVRETDMPEGIQSHVLELAYKALDHHEVSDCQSIARFIKQRFDEAYGPAWHCVV 60
           MLEGKAVVRETDMP+GIQSHVLELAYKALD HEVSDCQSIA FIKQRFDEAYGPAWHCV 
Sbjct: 1   MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVA 60

Query: 61  GKAFGGCITHLCGSFIFFHVDIMEFLIFKDGRDFSKSIEETLGVRQK 108
           GKAFGGCITHLCGSFIFFHVD MEFL+FKDGRD SKS+EET+GV +K
Sbjct: 61  GKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCSKSVEETVGVCRK 107

[Close]

BLAST of MS016680 vs. ExPASy TrEMBL
Match: A0A0A0LA26 (Dynein light chain OS=Cucumis sativus OX=3659 GN=Csa_3G733350 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 6.4e-49
Identity = 94/107 (87.85%), Postives = 100/107 (93.46%), Query Frame = 0


Query: 1   MLEGKAVVRETDMPEGIQSHVLELAYKALDHHEVSDCQSIARFIKQRFDEAYGPAWHCVV 60
           MLEGKAVVRETDMP+GIQSHVLELAYKALD HEVSDCQSIA FIKQRFDEAYGPAWHCV 
Sbjct: 1   MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVA 60

Query: 61  GKAFGGCITHLCGSFIFFHVDIMEFLIFKDGRDFSKSIEETLGVRQK 108
           GKAFGGCITHLCGS+IFFHVD MEFL+FKDGRD  KS+EET+GV +K
Sbjct: 61  GKAFGGCITHLCGSYIFFHVDTMEFLVFKDGRDCFKSVEETVGVCRK 107

[Close]

BLAST of MS016680 vs. ExPASy TrEMBL
Match: A0A2P5EZ32 (Dynein light chain OS=Trema orientale OX=63057 GN=TorRG33x02_134280 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.2e-44
Identity = 85/108 (78.70%), Postives = 100/108 (92.59%), Query Frame = 0


Query: 1   MLEGKAVVRETDMPEGIQSHVLELAYKALDHHEVSDCQSIARFIKQRFDEAYGPAWHCVV 60
           MLEGKAVVRETDMPE +QSHV+ELAYKALD HEVSDCQSIA +IKQ+FDE YGPAW+CVV
Sbjct: 1   MLEGKAVVRETDMPEAMQSHVMELAYKALDLHEVSDCQSIANYIKQKFDEEYGPAWNCVV 60

Query: 61  GKAFGGCITHLCGSFIFFHVDIMEFLIFKDGRDFSKSIEETLGVRQKS 109
           GK FG CITHLCGSFIFFHV++MEFLIFKDG+DF+++++E +GV QK+
Sbjct: 61  GKDFGSCITHLCGSFIFFHVEMMEFLIFKDGKDFNETMDEAIGVLQKA 108

[Close]

BLAST of MS016680 vs. ExPASy TrEMBL
Match: A0A5J4ZMN8 (Dynein light chain OS=Nyssa sinensis OX=561372 GN=F0562_016270 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.1e-43
Identity = 84/107 (78.50%), Postives = 96/107 (89.72%), Query Frame = 0


Query: 1   MLEGKAVVRETDMPEGIQSHVLELAYKALDHHEVSDCQSIARFIKQRFDEAYGPAWHCVV 60
           MLEGKAV+RETDMPE +QSHV+ELAY+ALD HE SDCQSIA +IKQ+FDEAYGPAWHCVV
Sbjct: 1   MLEGKAVLRETDMPEALQSHVMELAYQALDLHEASDCQSIAHYIKQKFDEAYGPAWHCVV 60

Query: 61  GKAFGGCITHLCGSFIFFHVDIMEFLIFKDGRDFSKSIEETLGVRQK 108
           GK FG CITHLCGSFIFF VD+MEFL+FKDG+D ++S EE +GV QK
Sbjct: 61  GKDFGSCITHLCGSFIFFRVDMMEFLVFKDGKDLTESKEEAIGVLQK 107

[Close]

BLAST of MS016680 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 97.1 bits (240), Expect = 9.5e-21
Identity = 46/89 (51.69%), Postives = 61/89 (68.54%), Query Frame = 0


Query: 1  MLEGKAVVRETDMPEGIQSHVLELAYKALDHHEVSDCQSIARFIKQRFDEAYGPAWHCVV 60
          MLEGKA+V ++DMP  +Q   +  A +ALD  +V DC+SIA  IK+ FDE YG  W CVV
Sbjct: 1  MLEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVV 60

Query: 61 GKAFGGCITHLCGSFIFFHVDIMEFLIFK 90
          G  FG   TH  G+FI+F ++ ++FLIFK
Sbjct: 61 GSNFGCFFTHSKGTFIYFQLETLKFLIFK 89

[Close]

BLAST of MS016680 vs. TAIR 10
Match: AT3G16120.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 95.1 bits (235), Expect = 3.6e-20
Identity = 47/89 (52.81%), Postives = 59/89 (66.29%), Query Frame = 0


Query: 1  MLEGKAVVRETDMPEGIQSHVLELAYKALDHHEVSDCQSIARFIKQRFDEAYGPAWHCVV 60
          MLEGKA V ETDMP  +Q   +++A ++LD  +V D  SIA  IK+ FDE YG  W CVV
Sbjct: 1  MLEGKAKVEETDMPVKMQMQAMKIASQSLDLFDVFDSISIAAHIKKEFDERYGSGWQCVV 60

Query: 61 GKAFGGCITHLCGSFIFFHVDIMEFLIFK 90
          G  FG   TH  G+FI+FH+  + FLIFK
Sbjct: 61 GTNFGCFFTHSKGTFIYFHLGTLNFLIFK 89

[Close]

BLAST of MS016680 vs. TAIR 10
Match: AT4G27360.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 91.7 bits (226), Expect = 4.0e-19
Identity = 44/89 (49.44%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 1  MLEGKAVVRETDMPEGIQSHVLELAYKALDHHEVSDCQSIARFIKQRFDEAYGPAWHCVV 60
          MLEGKAV+ +TDM + ++   L LA KALD  +V++   IARFIK+ FD +YG  W C+V
Sbjct: 1  MLEGKAVMGDTDMKQTMKEDALSLASKALDCFDVTEPTQIARFIKKEFDRSYGSGWQCIV 60

Query: 61 GKAFGGCITHLCGSFIFFHVDIMEFLIFK 90
          G  FG  +TH  G FI F V  +  L+FK
Sbjct: 61 GTHFGSFVTHCSGCFIHFSVGSLTILLFK 89

[Close]

BLAST of MS016680 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 76.3 bits (186), Expect = 1.7e-14
Identity = 34/78 (43.59%), Postives = 48/78 (61.54%), Query Frame = 0


Query: 12  DMPEGIQSHVLELAYKALDHHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAFGGCITHL 71
           DMP  +Q+H    A   LD  E    + +A  +K+ FD+ YGPAWHC+VG +FG  +TH 
Sbjct: 123 DMPGFMQAHAFRCARMTLDSLEKFSSKHMAFNLKKEFDKGYGPAWHCIVGSSFGSFVTHS 182

Query: 72  CGSFIFFHVDIMEFLIFK 90
            G FI+F +D +  L+FK
Sbjct: 183 TGCFIYFSMDKLYVLLFK 200

[Close]

BLAST of MS016680 vs. TAIR 10
Match: AT4G15930.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 75.1 bits (183), Expect = 3.9e-14
Identity = 32/87 (36.78%), Postives = 53/87 (60.92%), Query Frame = 0


Query: 5   KAVVRETDMPEGIQSHVLELAYKALDHHEVSDCQSIARFIKQRFDEAYGPAWHCVVGKAF 64
           +AV++  DM + +Q   +E+A  A + + V   + IA  IK+ FD+ +G  WHC+VG+ F
Sbjct: 39  RAVIKSADMKDDMQKEAIEIAISAFEKYSVE--KDIAENIKKEFDKKHGATWHCIVGRNF 98

Query: 65  GGCITHLCGSFIFFHVDIMEFLIFKDG 92
           G  +TH    F++F++D    L+FK G
Sbjct: 99  GSYVTHETNHFVYFYLDQKAVLLFKSG 123

The following BLAST results are available for this feature:

BLAST of MS016680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145583.1	1.9e-55	99.07	dynein light chain-like [Momordica charantia]	[more]
XP_008442502.1	1.2e-49	89.72	PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo]	[more]
KGN58830.1	1.3e-48	87.85	hypothetical protein Csa_001625 [Cucumis sativus]	[more]
PON90790.1	2.6e-44	78.70	Dynein light chain [Trema orientale]	[more]
KAA8518956.1	2.2e-43	78.50	hypothetical protein F0562_016270 [Nyssa sinensis]	[more]

BLAST of MS016680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94758	1.5e-15	42.86	Dynein light chain OS=Schistosoma mansoni OX=6183 GN=DLC PE=1 SV=1	[more]
Q94748	3.4e-15	42.86	Probable dynein light chain OS=Schistosoma mansoni OX=6183 PE=3 SV=1	[more]
O02414	4.4e-15	40.66	Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=10431...	[more]
O96860	1.7e-14	39.56	Dynein light chain 2, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=Cdlc2 PE...	[more]
Q22799	2.2e-14	37.36	Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=...	[more]

BLAST of MS016680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CWC6	9.2e-56	99.07	Dynein light chain OS=Momordica charantia OX=3673 GN=LOC111015000 PE=3 SV=1	[more]
A0A1S3B5U2	5.8e-50	89.72	Dynein light chain OS=Cucumis melo OX=3656 GN=LOC103486353 PE=3 SV=1	[more]
A0A0A0LA26	6.4e-49	87.85	Dynein light chain OS=Cucumis sativus OX=3659 GN=Csa_3G733350 PE=3 SV=1	[more]
A0A2P5EZ32	1.2e-44	78.70	Dynein light chain OS=Trema orientale OX=63057 GN=TorRG33x02_134280 PE=3 SV=1	[more]
A0A5J4ZMN8	1.1e-43	78.50	Dynein light chain OS=Nyssa sinensis OX=561372 GN=F0562_016270 PE=3 SV=1	[more]

BLAST of MS016680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52240.2	9.5e-21	51.69	RHO guanyl-nucleotide exchange factor 11	[more]
AT3G16120.1	3.6e-20	52.81	Dynein light chain type 1 family protein	[more]
AT4G27360.1	4.0e-19	49.44	Dynein light chain type 1 family protein	[more]
AT5G20110.1	1.7e-14	43.59	Dynein light chain type 1 family protein	[more]
AT4G15930.1	3.9e-14	36.78	Dynein light chain type 1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 1..90 e-value: 3.7E-38 score: 142.8
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 5..89 e-value: 8.6E-30 score: 103.0
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 1..107
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10	Protein Inhibitor Of Neuronal Nitric Oxide Synthase;	coord: 2..90 e-value: 5.5E-30 score: 105.2
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 1..90
None	No IPR available	PANTHER	PTHR11886:SF85	DYNEIN LIGHT CHAIN	coord: 1..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS016680.1	MS016680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0030286	dynein complex