MS016675 (gene) Bitter gourd (TR) v1

Overview


Name	MS016675
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	PRA1 family protein
Location	scaffold563: 17105 .. 19535 (-)
RNA-Seq Expression	MS016675
Synteny	MS016675

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTGGGGCAACGTTACTGCGGAGGATCTGATCGATGCGCTTCGAGAGGTTGATTGGTCATCGCCTCCTCGACCTATCTCCGAGTTCTTCTCCAGGTTCACCGTCCCCCGATCTTCCGCCAAGTGGAACAGCCGCCTCAAATGCAATCTCTATTAGTACGATCACTGTCTCCTTCAATTTATTCGAGTTGCTTTATTATCTTTTCTTTGGCACATAAGTTTTGCTGAGAGTCGTGATTGTTAGAGTGACGCTGATTCACACTACGAGGTGCTTCTAATTTCAACTTGTTTTATATTGGTTTAGTTCGATTTTCACGTATCGAGTACGTACTTTGATGCTTTGGTAAGGAGCTATATGCTCTGAAAGCGAAATGGAATATGATTACGCTATATGCAACTTGTCAAAGGAAATACGTGCTCAATCGAGCTATTTTTCTGCCGTGTTTGGGTCGGCTGTTTTGGTTAATTAATTTACTTGTTAGACAGTCATGCTGAAATCTATATCTGCGTTGCTTATTTTATCGTGATTAATGTGTACTCAAAATAAAGGATCGTGGCTAATATGACAACATTCAGATCTCCTTTATATTTTATATCTACCTTTGGTTTGGAGATTTCATACCTTCAATCGTTAATGTGTCATTTCATTTATAAACTGGTTGCTATGCAATGCCTTGTTCAACTTACTAATTTTGAATCTTAATTTCTTGCACTTGCAGTTACCGAACCAACTACTTCATTATGATTGTTTTCATTCTCGGTGAGTGATTAAACTGTCATACATCTGCATCTACATGTGTACCGCGTATGTTTCTTTTTCTTGTTTTAAAATACGTACAGTTTTTATAAAGCGTTGGTTTGTTGATAACAGGATTGGGTTTTCTACGAAGGCCGCTTGCTATTGTTGCTGCTTTTCTGACAGCACTCAGCATTGCTTTTCTGAATGACAGGTGAGCTGTTATACACACTCTGGATAGCAATTAATATCATGAGCCTTTTCTATGATGGGGAATGCTGTTTATTCTTTGGCCTTGAATTTCCTTGTGAGGAATTATATATTTTATTCTTTTTGTGTCCTTTTTTCTTTTATCAAAATACCTGGGAAAGCTAATGGTTGGTTAGATGTAAAGTTGCTCTTTTAACCTTAGCTTGTATAAAGTTTTAATAATTTGTTAACTAAACATCTAGTTAATTACATATTAGAATATTGAATAAAATGTTTGTTTCTCATGCCTTTCCATTTGCTTGCAAGTGGGATTTTCTGGTCCAATCATTTTTTTTTTTGGCTAAATGTCTTGACAAATTCAAGTTTGTAAAAAGGAAAGTGAACTTCAACCCGCAAAAACTTTGTTTTTTCATTAAATAAGGGATTGTTTCTCTGTATCCTCCATTGAGAATAACAGATGGTGCTTATTAATAATTTTAATTTATTAATGAACATGTTAAACTTCATGATTACACTTGTTATTCAGAGTAGTAGGATTTGTAGATACAAAATTATGAATATATTATTATGCTCTTTGTATCTGATGATTGAGGAGTCGCATATTATAATGTAGTGACATGTATGGATCCTTTGTTTGAATCTTATATTAAGTTCGACAGGGGACTGCCTTTTTTTTTCCCTAAATATTTTTTGCCACAGCTTTGCAGGCACTTTCAGTGAGAAAGTAACCAGAACTGTTAGACAGTTCTCCCCACATATGGCTGCAAAGATGAGACCTCCTCTTACGTATGTCTCTCCATAAATGTTTATGGATACACTTATCCACGACTTCTGATTTCATAAATGTCCCTAGGCTGTACTTGTGCCTTAGGGCTTCTTTTGATTTTGAATACAATCTTTTCGTTTCTTATAAAAAAAAAAGATTTTATATGTGTTAAATAATTTTCAGGCCTGTTATCCGTGGACGCCCGTCATCTAAAAGAGCAATATACATATGTGGACGTCCTCGATGGGTTTTTGTCATGGTGTTCGCTTCTGGTAAAAATACTTGTTATTAGTAATTGGTGTACTTTTATATCCCACATTATCTATGCTACATATATTATGTTGGAGTGCACTGTTCCAATTGGACTTCGTATGTCCTTTCGAAATTTTACATTATATATGTCTTCTGCTCTATGTTTTCTGAAAATTTTCTCCCATATTATGTAGTGAGTTTCATTCTCTGGTTCATTTCTTGCGGTCTGTTGACTGTACTTTGGTCGCTTGCCTTTGGACTTCTTGGTATGCAGCTGCTTATAAAGAATTTGTTTGTTTTTCTAAGCTTTTATTTTATGGTTGATTTTCTCACTCACCCCTTCCCCTCCTGATAAATTTCTCAGCCACTTTGCTTCATGCAAGCTTCAGAACACCTAACTTGAAAGCTCGTCTAAACACATTCCGTGAGGAATTCCGTGCTGTTTGGCGCAATTATAGTGAACTG

mRNA sequence

ATGGATTGGGGCAACGTTACTGCGGAGGATCTGATCGATGCGCTTCGAGAGGTTGATTGGTCATCGCCTCCTCGACCTATCTCCGAGTTCTTCTCCAGGTTCACCGTCCCCCGATCTTCCGCCAAGTGGAACAGCCGCCTCAAATGCAATCTCTATTATTACCGAACCAACTACTTCATTATGATTGTTTTCATTCTCGGATTGGGTTTTCTACGAAGGCCGCTTGCTATTGTTGCTGCTTTTCTGACAGCACTCAGCATTGCTTTTCTGAATGACAGCTTTGCAGGCACTTTCAGTGAGAAAGTAACCAGAACTGTTAGACAGTTCTCCCCACATATGGCTGCAAAGATGAGACCTCCTCTTACGCCTGTTATCCGTGGACGCCCGTCATCTAAAAGAGCAATATACATATGTGGACGTCCTCGATGGGTTTTTGTCATGGTGTTCGCTTCTGTGAGTTTCATTCTCTGGTTCATTTCTTGCGGTCTGTTGACTGTACTTTGGTCGCTTGCCTTTGGACTTCTTGCCACTTTGCTTCATGCAAGCTTCAGAACACCTAACTTGAAAGCTCGTCTAAACACATTCCGTGAGGAATTCCGTGCTGTTTGGCGCAATTATAGTGAACTG

Coding sequence (CDS)

ATGGATTGGGGCAACGTTACTGCGGAGGATCTGATCGATGCGCTTCGAGAGGTTGATTGGTCATCGCCTCCTCGACCTATCTCCGAGTTCTTCTCCAGGTTCACCGTCCCCCGATCTTCCGCCAAGTGGAACAGCCGCCTCAAATGCAATCTCTATTATTACCGAACCAACTACTTCATTATGATTGTTTTCATTCTCGGATTGGGTTTTCTACGAAGGCCGCTTGCTATTGTTGCTGCTTTTCTGACAGCACTCAGCATTGCTTTTCTGAATGACAGCTTTGCAGGCACTTTCAGTGAGAAAGTAACCAGAACTGTTAGACAGTTCTCCCCACATATGGCTGCAAAGATGAGACCTCCTCTTACGCCTGTTATCCGTGGACGCCCGTCATCTAAAAGAGCAATATACATATGTGGACGTCCTCGATGGGTTTTTGTCATGGTGTTCGCTTCTGTGAGTTTCATTCTCTGGTTCATTTCTTGCGGTCTGTTGACTGTACTTTGGTCGCTTGCCTTTGGACTTCTTGCCACTTTGCTTCATGCAAGCTTCAGAACACCTAACTTGAAAGCTCGTCTAAACACATTCCGTGAGGAATTCCGTGCTGTTTGGCGCAATTATAGTGAACTG

Protein sequence

MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFIMIVFILGLGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPPLTPVIRGRPSSKRAIYICGRPRWVFVMVFASVSFILWFISCGLLTVLWSLAFGLLATLLHASFRTPNLKARLNTFREEFRAVWRNYSEL

Homology

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BLAST of MS016675 vs. NCBI nr
Match: XP_022145695.1 (PRA1 family protein A1 [Momordica charantia])

HSP 1 Score: 415.6 bits (1067), Expect = 2.5e-112
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFI 60
           MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFI
Sbjct: 1   MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFI 60

Query: 61  MIVFILGLGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP 120
           MIVFILGLGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP
Sbjct: 61  MIVFILGLGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP 120

Query: 121 LTPVIRGRPSSKRAIYICGRPRWVFVMVFASVSFILWFISCGLLTVLWSLAFGLLATLLH 180
           LTPVIRGRPSSKRAIYICGRPRWVFVMVFASVSFILWFISCGLLTVLWSLAFGLLATLLH
Sbjct: 121 LTPVIRGRPSSKRAIYICGRPRWVFVMVFASVSFILWFISCGLLTVLWSLAFGLLATLLH 180

Query: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 210
           ASFRTPNLKARLNTFREEFRAVWRNYSEL
Sbjct: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 209

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BLAST of MS016675 vs. NCBI nr
Match: XP_008442509.1 (PREDICTED: PRA1 family protein A1-like [Cucumis melo] >KAA0044118.1 PRA1 family protein A1-like [Cucumis melo var. makuwa])

HSP 1 Score: 407.1 bits (1045), Expect = 8.9e-110
Identity = 201/209 (96.17%), Postives = 208/209 (99.52%), Query Frame = 0


Query: 1   MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFI 60
           MDWGNVTAEDL+DALREVDWSSPPRPISEFFSRFT+PRSSAKWNSRLKCNLYYYRTNYFI
Sbjct: 1   MDWGNVTAEDLVDALREVDWSSPPRPISEFFSRFTIPRSSAKWNSRLKCNLYYYRTNYFI 60

Query: 61  MIVFILGLGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP 120
           MIVFIL LGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP
Sbjct: 61  MIVFILALGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP 120

Query: 121 LTPVIRGRPSSKRAIYICGRPRWVFVMVFASVSFILWFISCGLLTVLWSLAFGLLATLLH 180
           LTPVIRGRPS+KRAIYICGRPRWVFV+VF+SVSF+LWFISCGLLTVLWSL+FGLLATLLH
Sbjct: 121 LTPVIRGRPSAKRAIYICGRPRWVFVLVFSSVSFLLWFISCGLLTVLWSLSFGLLATLLH 180

Query: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 210
           ASFRTPNLKARLNTFREEFRAVWRNYSEL
Sbjct: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 209

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BLAST of MS016675 vs. NCBI nr
Match: XP_022934951.1 (PRA1 family protein A1-like [Cucurbita moschata] >KAG7027936.1 PRA1 family protein A1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 406.8 bits (1044), Expect = 1.2e-109
Identity = 202/209 (96.65%), Postives = 208/209 (99.52%), Query Frame = 0


Query: 1   MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFI 60
           MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFI
Sbjct: 1   MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFI 60

Query: 61  MIVFILGLGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP 120
           MIVFIL LGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPH+AAKMRPP
Sbjct: 61  MIVFILALGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHLAAKMRPP 120

Query: 121 LTPVIRGRPSSKRAIYICGRPRWVFVMVFASVSFILWFISCGLLTVLWSLAFGLLATLLH 180
           LTPVIRGRPS+KRAIYICGRPRWVFV++F+SVSF+LWFISCGLLTVLWSLAFGLLATLLH
Sbjct: 121 LTPVIRGRPSAKRAIYICGRPRWVFVLMFSSVSFLLWFISCGLLTVLWSLAFGLLATLLH 180

Query: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 210
           ASFRTPNLKARLNTFREEFRAVWRNYSEL
Sbjct: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 209

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BLAST of MS016675 vs. NCBI nr
Match: XP_038906252.1 (PRA1 family protein A1-like [Benincasa hispida])

HSP 1 Score: 406.8 bits (1044), Expect = 1.2e-109
Identity = 202/209 (96.65%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 1   MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFI 60
           MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFT+PRSS+KWNSRLKCNLYYYRTNYFI
Sbjct: 1   MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTIPRSSSKWNSRLKCNLYYYRTNYFI 60

Query: 61  MIVFILGLGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP 120
           MIVFIL LGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP
Sbjct: 61  MIVFILALGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP 120

Query: 121 LTPVIRGRPSSKRAIYICGRPRWVFVMVFASVSFILWFISCGLLTVLWSLAFGLLATLLH 180
           LTPVIRGRPS+KR IYICGRPRWVFV+VF+SVSFILWFISCGLLTVLWSLAFGLLATLLH
Sbjct: 121 LTPVIRGRPSAKRTIYICGRPRWVFVLVFSSVSFILWFISCGLLTVLWSLAFGLLATLLH 180

Query: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 210
           ASFRTPNLKARLNTFREEFRAVWRNYSEL
Sbjct: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 209

[Close]

BLAST of MS016675 vs. NCBI nr
Match: XP_023540053.1 (PRA1 family protein A1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 406.4 bits (1043), Expect = 1.5e-109
Identity = 201/209 (96.17%), Postives = 208/209 (99.52%), Query Frame = 0


Query: 1   MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFI 60
           MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFI
Sbjct: 1   MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFI 60

Query: 61  MIVFILGLGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP 120
           MIVFIL LGFLRRPLA+VAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPH+AAKMRPP
Sbjct: 61  MIVFILALGFLRRPLAVVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHLAAKMRPP 120

Query: 121 LTPVIRGRPSSKRAIYICGRPRWVFVMVFASVSFILWFISCGLLTVLWSLAFGLLATLLH 180
           LTPVIRGRPS+KRAIYICGRPRWVFV++F+SVSF+LWFISCGLLTVLWSLAFGLLATLLH
Sbjct: 121 LTPVIRGRPSAKRAIYICGRPRWVFVLMFSSVSFLLWFISCGLLTVLWSLAFGLLATLLH 180

Query: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 210
           ASFRTPNLKARLNTFREEFRAVWRNYSEL
Sbjct: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 209

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BLAST of MS016675 vs. ExPASy Swiss-Prot
Match: Q9LZM7 (PRA1 family protein A1 OS=Arabidopsis thaliana OX=3702 GN=PRA1A1 PE=2 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 4.8e-90
Identity = 166/209 (79.43%), Postives = 182/209 (87.08%), Query Frame = 0


Query: 1   MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFI 60
           MDWGNVT +DL DALREVDWSSPPRP SEFFSRFTVP+S  KW+SRLKCNLYYYRTNYFI
Sbjct: 1   MDWGNVTVDDLFDALREVDWSSPPRPPSEFFSRFTVPKSVPKWDSRLKCNLYYYRTNYFI 60

Query: 61  MIVFILGLGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP 120
           MIV ILGLG L RPLAI AA LTALS+AFLNDSFAG+FSEK TRTVR+FSP +AAKMRPP
Sbjct: 61  MIVVILGLGVLTRPLAIFAALLTALSLAFLNDSFAGSFSEKATRTVRRFSPQLAAKMRPP 120

Query: 121 LTPVIRGRPSSKRAIYICGRPRWVFVMVFASVSFILWFISCGLLTVLWSLAFGLLATLLH 180
           LTPV RGRPSSKRAI++CG+PRWVFV+  + VSF LW+IS GLL V  +L    LAT+LH
Sbjct: 121 LTPVTRGRPSSKRAIHVCGQPRWVFVLTCSLVSFALWYISSGLLRVSVALLIAHLATILH 180

Query: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 210
           AS RTPNLKAR NTFREEFRAVWRNYSE+
Sbjct: 181 ASLRTPNLKARFNTFREEFRAVWRNYSEI 209

[Close]

BLAST of MS016675 vs. ExPASy Swiss-Prot
Match: Q8GWC3 (PRA1 family protein A2 OS=Arabidopsis thaliana OX=3702 GN=PRA1A2 PE=2 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 7.4e-83
Identity = 145/209 (69.38%), Postives = 174/209 (83.25%), Query Frame = 0


Query: 1   MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFI 60
           MDW NV AED+I+ALREV+WS+PPR   EFFSRF  PRS +KW SRLKCNLYYYRTNYFI
Sbjct: 1   MDWDNVAAEDVIEALREVEWSTPPRSFGEFFSRFAFPRSFSKWKSRLKCNLYYYRTNYFI 60

Query: 61  MIVFILGLGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP 120
           +++F+LGL  + RPLA+V A LTALSIAFLNDSFA +F+EK  RT+R FSPHMAAKMRPP
Sbjct: 61  LVIFVLGLALVTRPLALVGAALTALSIAFLNDSFAASFNEKFIRTIRHFSPHMAAKMRPP 120

Query: 121 LTPVIRGRPSSKRAIYICGRPRWVFVMVFASVSFILWFISCGLLTVLWSLAFGLLATLLH 180
             PVIRGR ++++ +Y+CG+PRWVFV+ F + S ++WF SCGLL VL++L   L   ++H
Sbjct: 121 HMPVIRGRSTARKTVYVCGKPRWVFVITFLTASLVMWFSSCGLLWVLYALLTSLAVIIVH 180

Query: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 210
           AS RTPNLKARLNTFREEFRAVWRNYSEL
Sbjct: 181 ASIRTPNLKARLNTFREEFRAVWRNYSEL 209

[Close]

BLAST of MS016675 vs. ExPASy Swiss-Prot
Match: Q8W115 (PRA1 family protein A3 OS=Arabidopsis thaliana OX=3702 GN=PRA1A3 PE=2 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 3.1e-81
Identity = 147/209 (70.33%), Postives = 176/209 (84.21%), Query Frame = 0


Query: 1   MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFI 60
           MDW +V AED+I+ALREV+WS+ PR ++EFFSRF  PRS +KW SRLKCNLYYYRTNYFI
Sbjct: 1   MDWDSVAAEDVIEALREVEWSASPRSLAEFFSRFAFPRSFSKWMSRLKCNLYYYRTNYFI 60

Query: 61  MIVFILGLGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP 120
           + VF+LGL  + RPLAI+ A LTALS+AFLNDSFA TF+EK+ RT+R FSPH+AAKMRPP
Sbjct: 61  LFVFVLGLALITRPLAILGAALTALSLAFLNDSFAATFNEKMIRTIRHFSPHLAAKMRPP 120

Query: 121 LTPVIRGRPSSKRAIYICGRPRWVFVMVFASVSFILWFISCGLLTVLWSLAFGLLATLLH 180
             PVIRGR ++++ +YICG+PR VFV++  + SF+LWF SCGLL VL++L   LL  LLH
Sbjct: 121 HMPVIRGRSATRKTVYICGQPRLVFVLLGLTASFVLWFTSCGLLWVLYALTTALLMILLH 180

Query: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 210
           AS RTPNLKARLNTFREEFRAVWRNYSEL
Sbjct: 181 ASLRTPNLKARLNTFREEFRAVWRNYSEL 209

[Close]

BLAST of MS016675 vs. ExPASy TrEMBL
Match: A0A6J1CV75 (PRA1 family protein OS=Momordica charantia OX=3673 GN=LOC111015089 PE=3 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.2e-112
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFI 60
           MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFI
Sbjct: 1   MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFI 60

Query: 61  MIVFILGLGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP 120
           MIVFILGLGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP
Sbjct: 61  MIVFILGLGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP 120

Query: 121 LTPVIRGRPSSKRAIYICGRPRWVFVMVFASVSFILWFISCGLLTVLWSLAFGLLATLLH 180
           LTPVIRGRPSSKRAIYICGRPRWVFVMVFASVSFILWFISCGLLTVLWSLAFGLLATLLH
Sbjct: 121 LTPVIRGRPSSKRAIYICGRPRWVFVMVFASVSFILWFISCGLLTVLWSLAFGLLATLLH 180

Query: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 210
           ASFRTPNLKARLNTFREEFRAVWRNYSEL
Sbjct: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 209

[Close]

BLAST of MS016675 vs. ExPASy TrEMBL
Match: A0A5A7TML8 (PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G004700 PE=3 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 4.3e-110
Identity = 201/209 (96.17%), Postives = 208/209 (99.52%), Query Frame = 0


Query: 1   MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFI 60
           MDWGNVTAEDL+DALREVDWSSPPRPISEFFSRFT+PRSSAKWNSRLKCNLYYYRTNYFI
Sbjct: 1   MDWGNVTAEDLVDALREVDWSSPPRPISEFFSRFTIPRSSAKWNSRLKCNLYYYRTNYFI 60

Query: 61  MIVFILGLGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP 120
           MIVFIL LGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP
Sbjct: 61  MIVFILALGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP 120

Query: 121 LTPVIRGRPSSKRAIYICGRPRWVFVMVFASVSFILWFISCGLLTVLWSLAFGLLATLLH 180
           LTPVIRGRPS+KRAIYICGRPRWVFV+VF+SVSF+LWFISCGLLTVLWSL+FGLLATLLH
Sbjct: 121 LTPVIRGRPSAKRAIYICGRPRWVFVLVFSSVSFLLWFISCGLLTVLWSLSFGLLATLLH 180

Query: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 210
           ASFRTPNLKARLNTFREEFRAVWRNYSEL
Sbjct: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 209

[Close]

BLAST of MS016675 vs. ExPASy TrEMBL
Match: A0A1S3B6M0 (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103486359 PE=3 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 4.3e-110
Identity = 201/209 (96.17%), Postives = 208/209 (99.52%), Query Frame = 0


Query: 1   MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFI 60
           MDWGNVTAEDL+DALREVDWSSPPRPISEFFSRFT+PRSSAKWNSRLKCNLYYYRTNYFI
Sbjct: 1   MDWGNVTAEDLVDALREVDWSSPPRPISEFFSRFTIPRSSAKWNSRLKCNLYYYRTNYFI 60

Query: 61  MIVFILGLGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP 120
           MIVFIL LGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP
Sbjct: 61  MIVFILALGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP 120

Query: 121 LTPVIRGRPSSKRAIYICGRPRWVFVMVFASVSFILWFISCGLLTVLWSLAFGLLATLLH 180
           LTPVIRGRPS+KRAIYICGRPRWVFV+VF+SVSF+LWFISCGLLTVLWSL+FGLLATLLH
Sbjct: 121 LTPVIRGRPSAKRAIYICGRPRWVFVLVFSSVSFLLWFISCGLLTVLWSLSFGLLATLLH 180

Query: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 210
           ASFRTPNLKARLNTFREEFRAVWRNYSEL
Sbjct: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 209

[Close]

BLAST of MS016675 vs. ExPASy TrEMBL
Match: A0A6J1F385 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111441962 PE=3 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 5.6e-110
Identity = 202/209 (96.65%), Postives = 208/209 (99.52%), Query Frame = 0


Query: 1   MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFI 60
           MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFI
Sbjct: 1   MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFI 60

Query: 61  MIVFILGLGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP 120
           MIVFIL LGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPH+AAKMRPP
Sbjct: 61  MIVFILALGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHLAAKMRPP 120

Query: 121 LTPVIRGRPSSKRAIYICGRPRWVFVMVFASVSFILWFISCGLLTVLWSLAFGLLATLLH 180
           LTPVIRGRPS+KRAIYICGRPRWVFV++F+SVSF+LWFISCGLLTVLWSLAFGLLATLLH
Sbjct: 121 LTPVIRGRPSAKRAIYICGRPRWVFVLMFSSVSFLLWFISCGLLTVLWSLAFGLLATLLH 180

Query: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 210
           ASFRTPNLKARLNTFREEFRAVWRNYSEL
Sbjct: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 209

[Close]

BLAST of MS016675 vs. ExPASy TrEMBL
Match: A0A0A0LFH8 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_3G733900 PE=3 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 9.6e-110
Identity = 201/209 (96.17%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 1   MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFI 60
           MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFT+PRSSAKWNSRLKCNLYYYRTNYFI
Sbjct: 1   MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTIPRSSAKWNSRLKCNLYYYRTNYFI 60

Query: 61  MIVFILGLGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP 120
           MIVFIL LGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP
Sbjct: 61  MIVFILALGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP 120

Query: 121 LTPVIRGRPSSKRAIYICGRPRWVFVMVFASVSFILWFISCGLLTVLWSLAFGLLATLLH 180
           LTPVIRGRPS+KRAIYICGRPRWVFV+VF+SVSF+ WFISCGLLTVLWSL+FGLLATLLH
Sbjct: 121 LTPVIRGRPSAKRAIYICGRPRWVFVLVFSSVSFLFWFISCGLLTVLWSLSFGLLATLLH 180

Query: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 210
           ASFRTPNLKARLNTFREEFRAVWRNYSEL
Sbjct: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 209

[Close]

BLAST of MS016675 vs. TAIR 10
Match: AT5G02040.1 (prenylated RAB acceptor 1.A1 )

HSP 1 Score: 332.0 bits (850), Expect = 3.4e-91
Identity = 166/209 (79.43%), Postives = 182/209 (87.08%), Query Frame = 0


Query: 1   MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFI 60
           MDWGNVT +DL DALREVDWSSPPRP SEFFSRFTVP+S  KW+SRLKCNLYYYRTNYFI
Sbjct: 1   MDWGNVTVDDLFDALREVDWSSPPRPPSEFFSRFTVPKSVPKWDSRLKCNLYYYRTNYFI 60

Query: 61  MIVFILGLGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP 120
           MIV ILGLG L RPLAI AA LTALS+AFLNDSFAG+FSEK TRTVR+FSP +AAKMRPP
Sbjct: 61  MIVVILGLGVLTRPLAIFAALLTALSLAFLNDSFAGSFSEKATRTVRRFSPQLAAKMRPP 120

Query: 121 LTPVIRGRPSSKRAIYICGRPRWVFVMVFASVSFILWFISCGLLTVLWSLAFGLLATLLH 180
           LTPV RGRPSSKRAI++CG+PRWVFV+  + VSF LW+IS GLL V  +L    LAT+LH
Sbjct: 121 LTPVTRGRPSSKRAIHVCGQPRWVFVLTCSLVSFALWYISSGLLRVSVALLIAHLATILH 180

Query: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 210
           AS RTPNLKAR NTFREEFRAVWRNYSE+
Sbjct: 181 ASLRTPNLKARFNTFREEFRAVWRNYSEI 209

[Close]

BLAST of MS016675 vs. TAIR 10
Match: AT5G02040.2 (prenylated RAB acceptor 1.A1 )

HSP 1 Score: 332.0 bits (850), Expect = 3.4e-91
Identity = 166/209 (79.43%), Postives = 182/209 (87.08%), Query Frame = 0


Query: 1   MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFI 60
           MDWGNVT +DL DALREVDWSSPPRP SEFFSRFTVP+S  KW+SRLKCNLYYYRTNYFI
Sbjct: 1   MDWGNVTVDDLFDALREVDWSSPPRPPSEFFSRFTVPKSVPKWDSRLKCNLYYYRTNYFI 60

Query: 61  MIVFILGLGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP 120
           MIV ILGLG L RPLAI AA LTALS+AFLNDSFAG+FSEK TRTVR+FSP +AAKMRPP
Sbjct: 61  MIVVILGLGVLTRPLAIFAALLTALSLAFLNDSFAGSFSEKATRTVRRFSPQLAAKMRPP 120

Query: 121 LTPVIRGRPSSKRAIYICGRPRWVFVMVFASVSFILWFISCGLLTVLWSLAFGLLATLLH 180
           LTPV RGRPSSKRAI++CG+PRWVFV+  + VSF LW+IS GLL V  +L    LAT+LH
Sbjct: 121 LTPVTRGRPSSKRAIHVCGQPRWVFVLTCSLVSFALWYISSGLLRVSVALLIAHLATILH 180

Query: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 210
           AS RTPNLKAR NTFREEFRAVWRNYSE+
Sbjct: 181 ASLRTPNLKARFNTFREEFRAVWRNYSEI 209

[Close]

BLAST of MS016675 vs. TAIR 10
Match: AT5G05987.1 (prenylated RAB acceptor 1.A2 )

HSP 1 Score: 308.1 bits (788), Expect = 5.2e-84
Identity = 145/209 (69.38%), Postives = 174/209 (83.25%), Query Frame = 0


Query: 1   MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFI 60
           MDW NV AED+I+ALREV+WS+PPR   EFFSRF  PRS +KW SRLKCNLYYYRTNYFI
Sbjct: 1   MDWDNVAAEDVIEALREVEWSTPPRSFGEFFSRFAFPRSFSKWKSRLKCNLYYYRTNYFI 60

Query: 61  MIVFILGLGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP 120
           +++F+LGL  + RPLA+V A LTALSIAFLNDSFA +F+EK  RT+R FSPHMAAKMRPP
Sbjct: 61  LVIFVLGLALVTRPLALVGAALTALSIAFLNDSFAASFNEKFIRTIRHFSPHMAAKMRPP 120

Query: 121 LTPVIRGRPSSKRAIYICGRPRWVFVMVFASVSFILWFISCGLLTVLWSLAFGLLATLLH 180
             PVIRGR ++++ +Y+CG+PRWVFV+ F + S ++WF SCGLL VL++L   L   ++H
Sbjct: 121 HMPVIRGRSTARKTVYVCGKPRWVFVITFLTASLVMWFSSCGLLWVLYALLTSLAVIIVH 180

Query: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 210
           AS RTPNLKARLNTFREEFRAVWRNYSEL
Sbjct: 181 ASIRTPNLKARLNTFREEFRAVWRNYSEL 209

[Close]

BLAST of MS016675 vs. TAIR 10
Match: AT3G11397.1 (prenylated RAB acceptor 1.A3 )

HSP 1 Score: 302.8 bits (774), Expect = 2.2e-82
Identity = 147/209 (70.33%), Postives = 176/209 (84.21%), Query Frame = 0


Query: 1   MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFI 60
           MDW +V AED+I+ALREV+WS+ PR ++EFFSRF  PRS +KW SRLKCNLYYYRTNYFI
Sbjct: 1   MDWDSVAAEDVIEALREVEWSASPRSLAEFFSRFAFPRSFSKWMSRLKCNLYYYRTNYFI 60

Query: 61  MIVFILGLGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP 120
           + VF+LGL  + RPLAI+ A LTALS+AFLNDSFA TF+EK+ RT+R FSPH+AAKMRPP
Sbjct: 61  LFVFVLGLALITRPLAILGAALTALSLAFLNDSFAATFNEKMIRTIRHFSPHLAAKMRPP 120

Query: 121 LTPVIRGRPSSKRAIYICGRPRWVFVMVFASVSFILWFISCGLLTVLWSLAFGLLATLLH 180
             PVIRGR ++++ +YICG+PR VFV++  + SF+LWF SCGLL VL++L   LL  LLH
Sbjct: 121 HMPVIRGRSATRKTVYICGQPRLVFVLLGLTASFVLWFTSCGLLWVLYALTTALLMILLH 180

Query: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 210
           AS RTPNLKARLNTFREEFRAVWRNYSEL
Sbjct: 181 ASLRTPNLKARLNTFREEFRAVWRNYSEL 209

[Close]

BLAST of MS016675 vs. TAIR 10
Match: AT3G11402.2 (Cysteine/Histidine-rich C1 domain family protein )

HSP 1 Score: 302.8 bits (774), Expect = 2.2e-82
Identity = 147/209 (70.33%), Postives = 176/209 (84.21%), Query Frame = 0


Query: 1   MDWGNVTAEDLIDALREVDWSSPPRPISEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFI 60
           MDW +V AED+I+ALREV+WS+ PR ++EFFSRF  PRS +KW SRLKCNLYYYRTNYFI
Sbjct: 702 MDWDSVAAEDVIEALREVEWSASPRSLAEFFSRFAFPRSFSKWMSRLKCNLYYYRTNYFI 761

Query: 61  MIVFILGLGFLRRPLAIVAAFLTALSIAFLNDSFAGTFSEKVTRTVRQFSPHMAAKMRPP 120
           + VF+LGL  + RPLAI+ A LTALS+AFLNDSFA TF+EK+ RT+R FSPH+AAKMRPP
Sbjct: 762 LFVFVLGLALITRPLAILGAALTALSLAFLNDSFAATFNEKMIRTIRHFSPHLAAKMRPP 821

Query: 121 LTPVIRGRPSSKRAIYICGRPRWVFVMVFASVSFILWFISCGLLTVLWSLAFGLLATLLH 180
             PVIRGR ++++ +YICG+PR VFV++  + SF+LWF SCGLL VL++L   LL  LLH
Sbjct: 822 HMPVIRGRSATRKTVYICGQPRLVFVLLGLTASFVLWFTSCGLLWVLYALTTALLMILLH 881

Query: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 210
           AS RTPNLKARLNTFREEFRAVWRNYSEL
Sbjct: 882 ASLRTPNLKARLNTFREEFRAVWRNYSEL 910

The following BLAST results are available for this feature:

BLAST of MS016675 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145695.1	2.5e-112	100.00	PRA1 family protein A1 [Momordica charantia]	[more]
XP_008442509.1	8.9e-110	96.17	PREDICTED: PRA1 family protein A1-like [Cucumis melo] >KAA0044118.1 PRA1 family ...	[more]
XP_022934951.1	1.2e-109	96.65	PRA1 family protein A1-like [Cucurbita moschata] >KAG7027936.1 PRA1 family prote...	[more]
XP_038906252.1	1.2e-109	96.65	PRA1 family protein A1-like [Benincasa hispida]	[more]
XP_023540053.1	1.5e-109	96.17	PRA1 family protein A1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS016675 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZM7	4.8e-90	79.43	PRA1 family protein A1 OS=Arabidopsis thaliana OX=3702 GN=PRA1A1 PE=2 SV=1	[more]
Q8GWC3	7.4e-83	69.38	PRA1 family protein A2 OS=Arabidopsis thaliana OX=3702 GN=PRA1A2 PE=2 SV=1	[more]
Q8W115	3.1e-81	70.33	PRA1 family protein A3 OS=Arabidopsis thaliana OX=3702 GN=PRA1A3 PE=2 SV=1	[more]

BLAST of MS016675 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CV75	1.2e-112	100.00	PRA1 family protein OS=Momordica charantia OX=3673 GN=LOC111015089 PE=3 SV=1	[more]
A0A5A7TML8	4.3e-110	96.17	PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G...	[more]
A0A1S3B6M0	4.3e-110	96.17	PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103486359 PE=3 SV=1	[more]
A0A6J1F385	5.6e-110	96.65	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111441962 PE=3 SV=1	[more]
A0A0A0LFH8	9.6e-110	96.17	PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_3G733900 PE=3 SV=1	[more]

BLAST of MS016675 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02040.1	3.4e-91	79.43	prenylated RAB acceptor 1.A1	[more]
AT5G02040.2	3.4e-91	79.43	prenylated RAB acceptor 1.A1	[more]
AT5G05987.1	5.2e-84	69.38	prenylated RAB acceptor 1.A2	[more]
AT3G11397.1	2.2e-82	70.33	prenylated RAB acceptor 1.A3	[more]
AT3G11402.2	2.2e-82	70.33	Cysteine/Histidine-rich C1 domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 20..192 e-value: 3.9E-44 score: 149.8
IPR004895	Prenylated rab acceptor PRA1	PANTHER	PTHR12859	PRA1 PROTEIN	coord: 1..209
None	No IPR available	PANTHER	PTHR12859:SF9	PRA1 FAMILY PROTEIN	coord: 1..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS016675.1	MS016675.1	mRNA