MS016629 (gene) Bitter gourd (TR) v1

Overview
NameMS016629
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncysteine-rich receptor-like protein kinase 10
Locationscaffold587: 11785 .. 11946 (+)
RNA-Seq ExpressionMS016629
SyntenyMS016629
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTCATATCCATATCGTAGTTGCTTACCCAACAATTTCACCCAGAATAACAATGATCAGTCTAGCCTCAATCTTCTCTTTTCAAATCTCTCCAACGCCCCTAGAATTAATGATTTCTTCAATACTTTCGGCGGTCGAACCCCAAACAATGACGTTTACGGT

mRNA sequence

GTTTCATATCCATATCGTAGTTGCTTACCCAACAATTTCACCCAGAATAACAATGATCAGTCTAGCCTCAATCTTCTCTTTTCAAATCTCTCCAACGCCCCTAGAATTAATGATTTCTTCAATACTTTCGGCGGTCGAACCCCAAACAATGACGTTTACGGT

Coding sequence (CDS)

GTTTCATATCCATATCGTAGTTGCTTACCCAACAATTTCACCCAGAATAACAATGATCAGTCTAGCCTCAATCTTCTCTTTTCAAATCTCTCCAACGCCCCTAGAATTAATGATTTCTTCAATACTTTCGGCGGTCGAACCCCAAACAATGACGTTTACGGT

Protein sequence

VSYPYRSCLPNNFTQNNNDQSSLNLLFSNLSNAPRINDFFNTFGGRTPNNDVYG
Homology
BLAST of MS016629 vs. NCBI nr
Match: XP_022139941.1 (cysteine-rich receptor-like protein kinase 10 [Momordica charantia])

HSP 1 Score: 80.9 bits (198), Expect = 3.8e-12
Identity = 43/55 (78.18%), Postives = 45/55 (81.82%), Query Frame = 0

Query: 1  VSYPYRSCLPNNFTQNNNDQSSLNLLFSNLS-NAPRINDFFNTFGGRTPNNDVYG 55
          V YPYRSCLP NFTQN+  QSSLNLLFSNLS NAP IN FFNT  GRTPN+ VYG
Sbjct: 25 VPYPYRSCLPANFTQNSTYQSSLNLLFSNLSANAPGINGFFNTSVGRTPNDTVYG 79

BLAST of MS016629 vs. NCBI nr
Match: XP_023001238.1 (cysteine-rich receptor-like protein kinase 10 [Cucurbita maxima])

HSP 1 Score: 73.9 bits (180), Expect = 4.6e-10
Identity = 39/55 (70.91%), Postives = 42/55 (76.36%), Query Frame = 0

Query: 1  VSYPYRSCLPNNFTQNNNDQSSLNLLFSNLS-NAPRINDFFNTFGGRTPNNDVYG 55
          V YPYRSCLP NFTQN+   S+LNLLFSNLS NAP  N FFNT  GR PN+ VYG
Sbjct: 23 VPYPYRSCLPGNFTQNSTYHSNLNLLFSNLSANAPPNNRFFNTSAGRPPNDAVYG 77

BLAST of MS016629 vs. NCBI nr
Match: XP_023519606.1 (cysteine-rich receptor-like protein kinase 10 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 72.4 bits (176), Expect = 1.3e-09
Identity = 38/55 (69.09%), Postives = 42/55 (76.36%), Query Frame = 0

Query: 1  VSYPYRSCLPNNFTQNNNDQSSLNLLFSNLS-NAPRINDFFNTFGGRTPNNDVYG 55
          VSYPYRSCLP NFTQN+   S+L+LLFSNLS N P  N FFNT  GR PN+ VYG
Sbjct: 23 VSYPYRSCLPGNFTQNSTYHSNLDLLFSNLSANGPPKNRFFNTSAGRPPNDAVYG 77

BLAST of MS016629 vs. NCBI nr
Match: XP_022933188.1 (cysteine-rich receptor-like protein kinase 10 [Cucurbita moschata])

HSP 1 Score: 72.4 bits (176), Expect = 1.3e-09
Identity = 38/55 (69.09%), Postives = 42/55 (76.36%), Query Frame = 0

Query: 1  VSYPYRSCLPNNFTQNNNDQSSLNLLFSNLS-NAPRINDFFNTFGGRTPNNDVYG 55
          VSYPYRSCLP NFTQN+   S+L+LLFSNLS N P  N FFNT  GR PN+ VYG
Sbjct: 23 VSYPYRSCLPGNFTQNSTYHSNLDLLFSNLSANGPPKNRFFNTSAGRPPNDAVYG 77

BLAST of MS016629 vs. NCBI nr
Match: KAG6584064.1 (Cysteine-rich receptor-like protein kinase 25, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 72.4 bits (176), Expect = 1.3e-09
Identity = 38/55 (69.09%), Postives = 42/55 (76.36%), Query Frame = 0

Query: 1  VSYPYRSCLPNNFTQNNNDQSSLNLLFSNLS-NAPRINDFFNTFGGRTPNNDVYG 55
          VSYPYRSCLP NFTQN+   S+L+LLFSNLS N P  N FFNT  GR PN+ VYG
Sbjct: 23 VSYPYRSCLPGNFTQNSTYHSNLDLLFSNLSANGPPKNRFFNTSAGRPPNDAVYG 77

BLAST of MS016629 vs. ExPASy TrEMBL
Match: A0A6J1CE69 (cysteine-rich receptor-like protein kinase 10 OS=Momordica charantia OX=3673 GN=LOC111010730 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.8e-12
Identity = 43/55 (78.18%), Postives = 45/55 (81.82%), Query Frame = 0

Query: 1  VSYPYRSCLPNNFTQNNNDQSSLNLLFSNLS-NAPRINDFFNTFGGRTPNNDVYG 55
          V YPYRSCLP NFTQN+  QSSLNLLFSNLS NAP IN FFNT  GRTPN+ VYG
Sbjct: 25 VPYPYRSCLPANFTQNSTYQSSLNLLFSNLSANAPGINGFFNTSVGRTPNDTVYG 79

BLAST of MS016629 vs. ExPASy TrEMBL
Match: A0A6J1KPY4 (cysteine-rich receptor-like protein kinase 10 OS=Cucurbita maxima OX=3661 GN=LOC111495427 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.2e-10
Identity = 39/55 (70.91%), Postives = 42/55 (76.36%), Query Frame = 0

Query: 1  VSYPYRSCLPNNFTQNNNDQSSLNLLFSNLS-NAPRINDFFNTFGGRTPNNDVYG 55
          V YPYRSCLP NFTQN+   S+LNLLFSNLS NAP  N FFNT  GR PN+ VYG
Sbjct: 23 VPYPYRSCLPGNFTQNSTYHSNLNLLFSNLSANAPPNNRFFNTSAGRPPNDAVYG 77

BLAST of MS016629 vs. ExPASy TrEMBL
Match: A0A6J1F417 (cysteine-rich receptor-like protein kinase 10 OS=Cucurbita moschata OX=3662 GN=LOC111440040 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 6.5e-10
Identity = 38/55 (69.09%), Postives = 42/55 (76.36%), Query Frame = 0

Query: 1  VSYPYRSCLPNNFTQNNNDQSSLNLLFSNLS-NAPRINDFFNTFGGRTPNNDVYG 55
          VSYPYRSCLP NFTQN+   S+L+LLFSNLS N P  N FFNT  GR PN+ VYG
Sbjct: 23 VSYPYRSCLPGNFTQNSTYHSNLDLLFSNLSANGPPKNRFFNTSAGRPPNDAVYG 77

BLAST of MS016629 vs. ExPASy TrEMBL
Match: A0A5A7UQH5 (Cysteine-rich receptor-like protein kinase 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G00560 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.6e-08
Identity = 35/54 (64.81%), Postives = 40/54 (74.07%), Query Frame = 0

Query: 2   SYPYRSCLPNNFTQNNNDQSSLNLLFSNLS-NAPRINDFFNTFGGRTPNNDVYG 55
           SYPYR CL  NFTQN+  Q++LNLLFS LS N P  N FFNT  GR+PN+ VYG
Sbjct: 643 SYPYRRCLTGNFTQNSTYQANLNLLFSTLSTNGPPTNRFFNTSVGRSPNDTVYG 696

BLAST of MS016629 vs. ExPASy TrEMBL
Match: A0A5D3BHV8 (Cysteine-rich receptor-like protein kinase 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G006080 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.6e-08
Identity = 35/54 (64.81%), Postives = 40/54 (74.07%), Query Frame = 0

Query: 2   SYPYRSCLPNNFTQNNNDQSSLNLLFSNLS-NAPRINDFFNTFGGRTPNNDVYG 55
           SYPYR CL  NFTQN+  Q++LNLLFS LS N P  N FFNT  GR+PN+ VYG
Sbjct: 675 SYPYRRCLTGNFTQNSTYQANLNLLFSTLSTNGPPTNRFFNTSVGRSPNDTVYG 728

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022139941.13.8e-1278.18cysteine-rich receptor-like protein kinase 10 [Momordica charantia][more]
XP_023001238.14.6e-1070.91cysteine-rich receptor-like protein kinase 10 [Cucurbita maxima][more]
XP_023519606.11.3e-0969.09cysteine-rich receptor-like protein kinase 10 [Cucurbita pepo subsp. pepo][more]
XP_022933188.11.3e-0969.09cysteine-rich receptor-like protein kinase 10 [Cucurbita moschata][more]
KAG6584064.11.3e-0969.09Cysteine-rich receptor-like protein kinase 25, partial [Cucurbita argyrosperma s... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1CE691.8e-1278.18cysteine-rich receptor-like protein kinase 10 OS=Momordica charantia OX=3673 GN=... [more]
A0A6J1KPY42.2e-1070.91cysteine-rich receptor-like protein kinase 10 OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A6J1F4176.5e-1069.09cysteine-rich receptor-like protein kinase 10 OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A5A7UQH53.6e-0864.81Cysteine-rich receptor-like protein kinase 10 OS=Cucumis melo var. makuwa OX=119... [more]
A0A5D3BHV83.6e-0864.81Cysteine-rich receptor-like protein kinase 10 OS=Cucumis melo var. makuwa OX=119... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS016629.1MS016629.1mRNA