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MS016440 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGGGTTGTGAATATTGAATCCTTGGAATCGTGGAACTCCTACTTGACCCAACCCACTCATCAGGATTCTCTCGTATGTTTCCTTCTTCAAGCTCATTTCCGTGCTAAAATTTGCTTTCCATCGATGTTTGCTCTGGAGATTTTTTTCAATATTTTTCGAATGTGTTGTTCATTTGCGAATATATTTGATGGATGCTTTTCTGGTTTCCGTTTTGCGCTCTCAATTCAAATTCATCAAACTAAAAAATGTTTGATATGAATGATTACGATATTCCAGATGGGTTGCCTGTATGTGCAGCCCCCATTGAAGTTTTCTCCTGCAAAAGTAATTTTACCCTCTTGTTCGTATTGAAATTGGGGAATAGTTCAGATTGGGTGAAATTGGTTATAAGGTATAATGAAAGATTTGCTTTATTTTGATGGGAAATTTGGTTTCTAGTTCGTTCTCATCAACAAATATAAGTTCCAAGTTTTCATTTGTCTGTTTGATTTTTTGTAGATTGTCGTGCACTTCACTGCTTCTTGGTGCATGCCTTCAGTAGCTATGAATCCATTCTTTGAAGAACTGGCTTTTAACTACCCAGATGTTCTGTTTCTCACAGTCGATGTTGATGAAGTTAAGGTAACAAGACTAGTTCCAATCTGCAAAACCATGATAAGTGTGTATTGCAACTTTTGAAGAATTTGGCACATTATGCTGAAAAACAGATTCTGTTGTTACTCATGTCTAGGAACTTATCCGCTTTACAGACTCCTCATGCTTTCAATTTACTTCTCTAAGTGACGCAAACTATAAATTGTTGTATCATAAGATCATTGTGTTAAGCAACCAACGAGGAAGGAGGTCATTTGTGGTTGCAAATGTTTATGGTAAAATTTCTGAGTTCTTAAGAACGGAGATGGGTTGTCATCAAACTGGATGAAATTATTTCTGAAATTTTTCTGAACCGTGGATTTGAGGAGAAACAGTTGCACATGTTAGCAAACCAGGAGATGAGGCATTAGTCAGACTAGACCAGAAAGTCCTCTGTTTTTTAGTTTCCAGTCCCTAGATTCTGAGTGTTTAATTGCACGTTTATAACATAGGGTTTATAAGGTAGATAAGCAAGCAGTTGGGCTTGTTAGCCATACCCATTTCAACATCTACTCTGAATACTGTTGATAATCATCAAAGTCCTAAAAAAGAGAATCATATTATATAAGTAATGGATGGTACGACAAATTATCGTCCCTGACCGACAGCAGAGAGATTATTTTTGGCTCGAATTTTTTATGCTAGGACGTGGCTGCTAAACTGGAGATAAAGGCAATGCCAACTTTCTTGCTGATGAAGAATGGGATTCAGATTGACAAGTTTGTGGGTGCAAATCCAGAAGAGACAAGGAAAAGGATAGATGCATATGTTGAGACCATACATGCTGCT AGGGTTGTGAATATTGAATCCTTGGAATCGTGGAACTCCTACTTGACCCAACCCACTCATCAGGATTCTCTCATTGTCGTGCACTTCACTGCTTCTTGGTGCATGCCTTCAGTAGCTATGAATCCATTCTTTGAAGAACTGGCTTTTAACTACCCAGATGTTCTGTTTCTCACAGTCGATGTTGATGAAGTTAAGGACGTGGCTGCTAAACTGGAGATAAAGGCAATGCCAACTTTCTTGCTGATGAAGAATGGGATTCAGATTGACAAGTTTGTGGGTGCAAATCCAGAAGAGACAAGGAAAAGGATAGATGCATATGTTGAGACCATACATGCTGCT AGGGTTGTGAATATTGAATCCTTGGAATCGTGGAACTCCTACTTGACCCAACCCACTCATCAGGATTCTCTCATTGTCGTGCACTTCACTGCTTCTTGGTGCATGCCTTCAGTAGCTATGAATCCATTCTTTGAAGAACTGGCTTTTAACTACCCAGATGTTCTGTTTCTCACAGTCGATGTTGATGAAGTTAAGGACGTGGCTGCTAAACTGGAGATAAAGGCAATGCCAACTTTCTTGCTGATGAAGAATGGGATTCAGATTGACAAGTTTGTGGGTGCAAATCCAGAAGAGACAAGGAAAAGGATAGATGCATATGTTGAGACCATACATGCTGCT RVVNIESLESWNSYLTQPTHQDSLIVVHFTASWCMPSVAMNPFFEELAFNYPDVLFLTVDVDEVKDVAAKLEIKAMPTFLLMKNGIQIDKFVGANPEETRKRIDAYVETIHAA Homology
BLAST of MS016440 vs. NCBI nr
Match: XP_022139837.1 (thioredoxin-like protein CXXS1 [Momordica charantia]) HSP 1 Score: 228.8 bits (582), Expect = 2.3e-56 Identity = 112/113 (99.12%), Postives = 112/113 (99.12%), Query Frame = 0
BLAST of MS016440 vs. NCBI nr
Match: XP_038895316.1 (thioredoxin-like protein CXXS1 [Benincasa hispida]) HSP 1 Score: 204.5 bits (519), Expect = 4.7e-49 Identity = 98/113 (86.73%), Postives = 104/113 (92.04%), Query Frame = 0
BLAST of MS016440 vs. NCBI nr
Match: XP_008441601.1 (PREDICTED: thioredoxin-like protein CXXS1 [Cucumis melo] >KAA0056899.1 thioredoxin-like protein CXXS1 [Cucumis melo var. makuwa] >TYJ99402.1 thioredoxin-like protein CXXS1 [Cucumis melo var. makuwa]) HSP 1 Score: 196.1 bits (497), Expect = 1.7e-46 Identity = 95/113 (84.07%), Postives = 100/113 (88.50%), Query Frame = 0
BLAST of MS016440 vs. NCBI nr
Match: XP_022954644.1 (thioredoxin-like protein CXXS1 [Cucurbita moschata] >XP_022994497.1 thioredoxin-like protein CXXS1 [Cucurbita maxima]) HSP 1 Score: 195.7 bits (496), Expect = 2.2e-46 Identity = 95/113 (84.07%), Postives = 101/113 (89.38%), Query Frame = 0
BLAST of MS016440 vs. NCBI nr
Match: XP_023542798.1 (thioredoxin-like protein CXXS1 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023542799.1 thioredoxin-like protein CXXS1 isoform X2 [Cucurbita pepo subsp. pepo] >KAG6573217.1 Thioredoxin-like protein CXXS1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 193.0 bits (489), Expect = 1.4e-45 Identity = 94/113 (83.19%), Postives = 100/113 (88.50%), Query Frame = 0
BLAST of MS016440 vs. ExPASy Swiss-Prot
Match: Q8LDI5 (Thioredoxin-like protein CXXS1 OS=Arabidopsis thaliana OX=3702 GN=CXXS1 PE=2 SV=2) HSP 1 Score: 152.1 bits (383), Expect = 3.7e-36 Identity = 70/109 (64.22%), Postives = 89/109 (81.65%), Query Frame = 0
BLAST of MS016440 vs. ExPASy Swiss-Prot
Match: Q0J9V5 (Thioredoxin-like protein CXXS1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0629500 PE=2 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 1.0e-25 Identity = 53/109 (48.62%), Postives = 81/109 (74.31%), Query Frame = 0
BLAST of MS016440 vs. ExPASy Swiss-Prot
Match: P85801 (Thioredoxin H-type OS=Populus jackii OX=640484 PE=1 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 2.8e-20 Identity = 42/106 (39.62%), Postives = 70/106 (66.04%), Query Frame = 0
BLAST of MS016440 vs. ExPASy Swiss-Prot
Match: P29448 (Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.1e-19 Identity = 47/103 (45.63%), Postives = 66/103 (64.08%), Query Frame = 0
BLAST of MS016440 vs. ExPASy Swiss-Prot
Match: Q07090 (Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 1.8e-19 Identity = 46/113 (40.71%), Postives = 69/113 (61.06%), Query Frame = 0
BLAST of MS016440 vs. ExPASy TrEMBL
Match: A0A6J1CF17 (thioredoxin-like protein CXXS1 OS=Momordica charantia OX=3673 GN=LOC111010651 PE=4 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 1.1e-56 Identity = 112/113 (99.12%), Postives = 112/113 (99.12%), Query Frame = 0
BLAST of MS016440 vs. ExPASy TrEMBL
Match: A0A5A7UTN6 (Thioredoxin-like protein CXXS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G006200 PE=4 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 8.2e-47 Identity = 95/113 (84.07%), Postives = 100/113 (88.50%), Query Frame = 0
BLAST of MS016440 vs. ExPASy TrEMBL
Match: A0A1S3B3B5 (thioredoxin-like protein CXXS1 OS=Cucumis melo OX=3656 GN=LOC103485681 PE=4 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 8.2e-47 Identity = 95/113 (84.07%), Postives = 100/113 (88.50%), Query Frame = 0
BLAST of MS016440 vs. ExPASy TrEMBL
Match: A0A6J1JW03 (thioredoxin-like protein CXXS1 OS=Cucurbita maxima OX=3661 GN=LOC111490202 PE=4 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 1.1e-46 Identity = 95/113 (84.07%), Postives = 101/113 (89.38%), Query Frame = 0
BLAST of MS016440 vs. ExPASy TrEMBL
Match: A0A6J1GTK2 (thioredoxin-like protein CXXS1 OS=Cucurbita moschata OX=3662 GN=LOC111456843 PE=4 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 1.1e-46 Identity = 95/113 (84.07%), Postives = 101/113 (89.38%), Query Frame = 0
BLAST of MS016440 vs. TAIR 10
Match: AT1G11530.1 (C-terminal cysteine residue is changed to a serine 1 ) HSP 1 Score: 152.1 bits (383), Expect = 2.6e-37 Identity = 70/109 (64.22%), Postives = 89/109 (81.65%), Query Frame = 0
BLAST of MS016440 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 ) HSP 1 Score: 97.4 bits (241), Expect = 7.6e-21 Identity = 47/103 (45.63%), Postives = 66/103 (64.08%), Query Frame = 0
BLAST of MS016440 vs. TAIR 10
Match: AT3G08710.1 (thioredoxin H-type 9 ) HSP 1 Score: 95.5 bits (236), Expect = 2.9e-20 Identity = 42/106 (39.62%), Postives = 68/106 (64.15%), Query Frame = 0
BLAST of MS016440 vs. TAIR 10
Match: AT3G08710.2 (thioredoxin H-type 9 ) HSP 1 Score: 95.5 bits (236), Expect = 2.9e-20 Identity = 42/106 (39.62%), Postives = 68/106 (64.15%), Query Frame = 0
BLAST of MS016440 vs. TAIR 10
Match: AT3G56420.1 (Thioredoxin superfamily protein ) HSP 1 Score: 89.0 bits (219), Expect = 2.7e-18 Identity = 37/105 (35.24%), Postives = 66/105 (62.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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