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MS016435 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAACCAAAACATTTCCCAAATGCGAGACTTCTGTGTACATATGGTTTCTGCAGGTTGTAACAGTTCTGGGTCTCACCTCTTTAGCCATATGGGCCAGCATAACCCCCAAGACTCCCACTTTCGCCATCTCCAATTTGGATCTCAAGCCGCATCAAAACGACACCGCTTTTGCCAGCAGCAGCTCTGTTGTAGCCTTGAACGTGACGGTCTCAAATCCCAACAGAATGGCTGGGATCTTCTTTGACGAGGTTAATGTAACCGTGCGTTGCAAAAACGACAGCGTTGGGGCGAAGTCGGTCCCGGGGTTTTATTTGGGCCACGAGAGCAGCGATTGGAAAGAGGTTGAGATGAGTGTGAATTGTGGTGCTGCTGATGGGAGAGTGGATCTGAGGGTTGGGTTGGAGACGAGGGTTAGATATAAGATTTTGAGGTTCAAGTCGAGGAATCGTCGGTTGGTTTTTGAGGATTGTGTGGAAAATGGTCGTGATGGGCAAATGGTGGGAACAAGAGACATGAAATTA AAAACCAAAACATTTCCCAAATGCGAGACTTCTGTGTACATATGGTTTCTGCAGGTTGTAACAGTTCTGGGTCTCACCTCTTTAGCCATATGGGCCAGCATAACCCCCAAGACTCCCACTTTCGCCATCTCCAATTTGGATCTCAAGCCGCATCAAAACGACACCGCTTTTGCCAGCAGCAGCTCTGTTGTAGCCTTGAACGTGACGGTCTCAAATCCCAACAGAATGGCTGGGATCTTCTTTGACGAGGTTAATGTAACCGTGCGTTGCAAAAACGACAGCGTTGGGGCGAAGTCGGTCCCGGGGTTTTATTTGGGCCACGAGAGCAGCGATTGGAAAGAGGTTGAGATGAGTGTGAATTGTGGTGCTGCTGATGGGAGAGTGGATCTGAGGGTTGGGTTGGAGACGAGGGTTAGATATAAGATTTTGAGGTTCAAGTCGAGGAATCGTCGGTTGGTTTTTGAGGATTGTGTGGAAAATGGTCGTGATGGGCAAATGGTGGGAACAAGAGACATGAAATTA AAAACCAAAACATTTCCCAAATGCGAGACTTCTGTGTACATATGGTTTCTGCAGGTTGTAACAGTTCTGGGTCTCACCTCTTTAGCCATATGGGCCAGCATAACCCCCAAGACTCCCACTTTCGCCATCTCCAATTTGGATCTCAAGCCGCATCAAAACGACACCGCTTTTGCCAGCAGCAGCTCTGTTGTAGCCTTGAACGTGACGGTCTCAAATCCCAACAGAATGGCTGGGATCTTCTTTGACGAGGTTAATGTAACCGTGCGTTGCAAAAACGACAGCGTTGGGGCGAAGTCGGTCCCGGGGTTTTATTTGGGCCACGAGAGCAGCGATTGGAAAGAGGTTGAGATGAGTGTGAATTGTGGTGCTGCTGATGGGAGAGTGGATCTGAGGGTTGGGTTGGAGACGAGGGTTAGATATAAGATTTTGAGGTTCAAGTCGAGGAATCGTCGGTTGGTTTTTGAGGATTGTGTGGAAAATGGTCGTGATGGGCAAATGGTGGGAACAAGAGACATGAAATTA KTKTFPKCETSVYIWFLQVVTVLGLTSLAIWASITPKTPTFAISNLDLKPHQNDTAFASSSSVVALNVTVSNPNRMAGIFFDEVNVTVRCKNDSVGAKSVPGFYLGHESSDWKEVEMSVNCGAADGRVDLRVGLETRVRYKILRFKSRNRRLVFEDCVENGRDGQMVGTRDMKL Homology
BLAST of MS016435 vs. NCBI nr
Match: XP_022140153.1 (cysteine-rich receptor-like protein kinase 10 [Momordica charantia]) HSP 1 Score: 319.3 bits (817), Expect = 2.0e-83 Identity = 157/160 (98.12%), Postives = 159/160 (99.38%), Query Frame = 0
BLAST of MS016435 vs. NCBI nr
Match: XP_038895943.1 (uncharacterized protein LOC120084116 [Benincasa hispida]) HSP 1 Score: 210.3 bits (534), Expect = 1.3e-50 Identity = 109/183 (59.56%), Postives = 136/183 (74.32%), Query Frame = 0
BLAST of MS016435 vs. NCBI nr
Match: KAG6573211.1 (NDR1/HIN1-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 197.6 bits (501), Expect = 8.9e-47 Identity = 102/166 (61.45%), Postives = 125/166 (75.30%), Query Frame = 0
BLAST of MS016435 vs. NCBI nr
Match: XP_008441503.1 (PREDICTED: NDR1/HIN1-Like protein 3-like isoform X2 [Cucumis melo] >XP_016899081.1 PREDICTED: NDR1/HIN1-Like protein 3-like isoform X1 [Cucumis melo] >TYJ99389.1 NDR1/HIN1-Like protein 3-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 188.7 bits (478), Expect = 4.1e-44 Identity = 102/176 (57.95%), Postives = 129/176 (73.30%), Query Frame = 0
BLAST of MS016435 vs. NCBI nr
Match: XP_011648423.1 (NDR1/HIN1-like protein 3 [Cucumis sativus] >KGN64555.1 hypothetical protein Csa_014023 [Cucumis sativus]) HSP 1 Score: 176.4 bits (446), Expect = 2.1e-40 Identity = 97/177 (54.80%), Postives = 131/177 (74.01%), Query Frame = 0
BLAST of MS016435 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 5.1e-05 Identity = 26/97 (26.80%), Postives = 54/97 (55.67%), Query Frame = 0
BLAST of MS016435 vs. ExPASy TrEMBL
Match: A0A6J1CHD2 (cysteine-rich receptor-like protein kinase 10 OS=Momordica charantia OX=3673 GN=LOC111010883 PE=4 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 9.8e-84 Identity = 157/160 (98.12%), Postives = 159/160 (99.38%), Query Frame = 0
BLAST of MS016435 vs. ExPASy TrEMBL
Match: A0A1S3B3M5 (NDR1/HIN1-Like protein 3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485604 PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 2.0e-44 Identity = 102/176 (57.95%), Postives = 129/176 (73.30%), Query Frame = 0
BLAST of MS016435 vs. ExPASy TrEMBL
Match: A0A5D3BKC2 (NDR1/HIN1-Like protein 3-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G006070 PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 2.0e-44 Identity = 102/176 (57.95%), Postives = 129/176 (73.30%), Query Frame = 0
BLAST of MS016435 vs. ExPASy TrEMBL
Match: A0A0A0LRN3 (Harpin inducing protein 1-like 9 OS=Cucumis sativus OX=3659 GN=Csa_1G064770 PE=4 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 1.0e-40 Identity = 97/177 (54.80%), Postives = 131/177 (74.01%), Query Frame = 0
BLAST of MS016435 vs. ExPASy TrEMBL
Match: A0A5A7URJ4 (NDR1/HIN1-Like protein 3-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G00550 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 3.3e-31 Identity = 70/114 (61.40%), Postives = 91/114 (79.82%), Query Frame = 0
BLAST of MS016435 vs. TAIR 10
Match: AT4G05220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 58.5 bits (140), Expect = 6.0e-09 Identity = 42/167 (25.15%), Postives = 76/167 (45.51%), Query Frame = 0
BLAST of MS016435 vs. TAIR 10
Match: AT1G61760.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 57.0 bits (136), Expect = 1.8e-08 Identity = 39/177 (22.03%), Postives = 79/177 (44.63%), Query Frame = 0
BLAST of MS016435 vs. TAIR 10
Match: AT2G35460.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 54.3 bits (129), Expect = 1.1e-07 Identity = 39/138 (28.26%), Postives = 69/138 (50.00%), Query Frame = 0
BLAST of MS016435 vs. TAIR 10
Match: AT3G11650.1 (NDR1/HIN1-like 2 ) HSP 1 Score: 49.3 bits (116), Expect = 3.7e-06 Identity = 26/97 (26.80%), Postives = 54/97 (55.67%), Query Frame = 0
BLAST of MS016435 vs. TAIR 10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 42.7 bits (99), Expect = 3.4e-04 Identity = 22/104 (21.15%), Postives = 50/104 (48.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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