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MS016428 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGAAGAGAGTGAGATGGTGGGGAGGGCATTTGTGGAACATTATTACCAATTGTTCGACAACGAAAGAGCCTCTGTTTCGTCTCTGTACCAACCAGAGTCGATGCTCACTTTCGAGGGGCAGAAAATCTTAGGCGTTGACGACATCTCCTCCAGGCTCCAGCAATTGCCCTTTGAACGCTGCCGACATGTCGTCAGCACTCTCGACACCCAGCCCTCCGCCGCCACCGGCTCCCTCCTCATCTTCGTCAGCGGCAGCCTTGAGTTGCCCGGTGAAGAACACCAACTCAGATTCAGCCAGGTACTTAAAACTGTTAAATAATGTCTACGTGTCTGGTTTATGTTTACTAAAAAAAAATAGAATTGTACAGTTAAACACTCATAAAAATAGGATTAAATAATATTTTTATTTAGGTAGAAATAAATTGAAAATGAGAATAAGAGAAAAAAAACTTATTTTATTGTTTCTAAAATATTTATAAATTAGAGAAAAAAACTTAAATAGTAGTCACAAATGTTTTTAGATGTTTTAATAAAATTGAAAACAAAAAAACAAGAAAGACATACTTGAGATCTGGTTTAGTAACGCTTCTATTTCTTTATTTTTAGTGGAGAAGAATGAATTGCATGGTTCAAAAGTTCAAAAATTCAATTCAATTCAATTCAAGTATGATCATTTATTTATATTTTGAAAAAATAAGAAATAAGAAACTTGTTTAATTGTCTCGAAAATTTCTATACAATTTAAAAAATGTTCACCACAAATAAAAAAAGAAACATAATTAGTTGTAAAATACCTAAATTTTTTGAGAAAAAAGAAACGGAAATTTTACCCAAGAAGCCTGCTATGATTTTTTATCCCGTCAGTAAATTTATTTGCTAAACCTAATATTGATCATTGCAGATGTTTCACTTGGTGCCGACGTCGCAGGGGAGTCTTTTCGTTCAGAACGACATTTTTCGCCTCAATTACGGT ATGGAAGAAGAGAGTGAGATGGTGGGGAGGGCATTTGTGGAACATTATTACCAATTGTTCGACAACGAAAGAGCCTCTGTTTCGTCTCTGTACCAACCAGAGTCGATGCTCACTTTCGAGGGGCAGAAAATCTTAGGCGTTGACGACATCTCCTCCAGGCTCCAGCAATTGCCCTTTGAACGCTGCCGACATGTCGTCAGCACTCTCGACACCCAGCCCTCCGCCGCCACCGGCTCCCTCCTCATCTTCGTCAGCGGCAGCCTTGAGTTGCCCGGTGAAGAACACCAACTCAGATTCAGCCAGATGTTTCACTTGGTGCCGACGTCGCAGGGGAGTCTTTTCGTTCAGAACGACATTTTTCGCCTCAATTACGGT ATGGAAGAAGAGAGTGAGATGGTGGGGAGGGCATTTGTGGAACATTATTACCAATTGTTCGACAACGAAAGAGCCTCTGTTTCGTCTCTGTACCAACCAGAGTCGATGCTCACTTTCGAGGGGCAGAAAATCTTAGGCGTTGACGACATCTCCTCCAGGCTCCAGCAATTGCCCTTTGAACGCTGCCGACATGTCGTCAGCACTCTCGACACCCAGCCCTCCGCCGCCACCGGCTCCCTCCTCATCTTCGTCAGCGGCAGCCTTGAGTTGCCCGGTGAAGAACACCAACTCAGATTCAGCCAGATGTTTCACTTGGTGCCGACGTCGCAGGGGAGTCTTTTCGTTCAGAACGACATTTTTCGCCTCAATTACGGT MEEESEMVGRAFVEHYYQLFDNERASVSSLYQPESMLTFEGQKILGVDDISSRLQQLPFERCRHVVSTLDTQPSAATGSLLIFVSGSLELPGEEHQLRFSQMFHLVPTSQGSLFVQNDIFRLNYG Homology
BLAST of MS016428 vs. NCBI nr
Match: XP_022139939.1 (nuclear transport factor 2 [Momordica charantia] >XP_022139940.1 nuclear transport factor 2 [Momordica charantia]) HSP 1 Score: 250.4 bits (638), Expect = 8.3e-63 Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0
BLAST of MS016428 vs. NCBI nr
Match: XP_022933198.1 (nuclear transport factor 2B [Cucurbita moschata] >KAG7019672.1 Nuclear transport factor 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 222.6 bits (566), Expect = 1.9e-54 Identity = 107/125 (85.60%), Postives = 119/125 (95.20%), Query Frame = 0
BLAST of MS016428 vs. NCBI nr
Match: XP_023519037.1 (nuclear transport factor 2B [Cucurbita pepo subsp. pepo]) HSP 1 Score: 222.2 bits (565), Expect = 2.4e-54 Identity = 107/125 (85.60%), Postives = 119/125 (95.20%), Query Frame = 0
BLAST of MS016428 vs. NCBI nr
Match: KAG6584071.1 (Nuclear transport factor 2B, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 220.3 bits (560), Expect = 9.2e-54 Identity = 106/124 (85.48%), Postives = 118/124 (95.16%), Query Frame = 0
BLAST of MS016428 vs. NCBI nr
Match: XP_038895004.1 (nuclear transport factor 2B [Benincasa hispida]) HSP 1 Score: 219.2 bits (557), Expect = 2.1e-53 Identity = 104/125 (83.20%), Postives = 119/125 (95.20%), Query Frame = 0
BLAST of MS016428 vs. ExPASy Swiss-Prot
Match: Q9C7F5 (Nuclear transport factor 2B OS=Arabidopsis thaliana OX=3702 GN=NTF2B PE=1 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 7.4e-38 Identity = 72/121 (59.50%), Postives = 91/121 (75.21%), Query Frame = 0
BLAST of MS016428 vs. ExPASy Swiss-Prot
Match: Q9FZK4 (Nuclear transport factor 2A OS=Arabidopsis thaliana OX=3702 GN=NTF2A PE=1 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 5.0e-34 Identity = 68/121 (56.20%), Postives = 92/121 (76.03%), Query Frame = 0
BLAST of MS016428 vs. ExPASy Swiss-Prot
Match: Q9XJ54 (Nuclear transport factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=NTF2 PE=2 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 1.2e-32 Identity = 66/122 (54.10%), Postives = 88/122 (72.13%), Query Frame = 0
BLAST of MS016428 vs. ExPASy Swiss-Prot
Match: Q10100 (Nuclear transport factor 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ntf2 PE=3 SV=2) HSP 1 Score: 120.6 bits (301), Expect = 1.3e-26 Identity = 57/114 (50.00%), Postives = 82/114 (71.93%), Query Frame = 0
BLAST of MS016428 vs. ExPASy Swiss-Prot
Match: Q9P926 (Nuclear transport factor 2 OS=Candida albicans OX=5476 GN=NTF2 PE=3 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 3.2e-25 Identity = 56/124 (45.16%), Postives = 81/124 (65.32%), Query Frame = 0
BLAST of MS016428 vs. ExPASy TrEMBL
Match: A0A6J1CEC9 (nuclear transport factor 2 OS=Momordica charantia OX=3673 GN=LOC111010728 PE=4 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 4.0e-63 Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0
BLAST of MS016428 vs. ExPASy TrEMBL
Match: A0A6J1F427 (nuclear transport factor 2B OS=Cucurbita moschata OX=3662 GN=LOC111440050 PE=4 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 9.0e-55 Identity = 107/125 (85.60%), Postives = 119/125 (95.20%), Query Frame = 0
BLAST of MS016428 vs. ExPASy TrEMBL
Match: A0A6J1KQ62 (nuclear transport factor 2B OS=Cucurbita maxima OX=3661 GN=LOC111495482 PE=4 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 1.0e-53 Identity = 105/125 (84.00%), Postives = 118/125 (94.40%), Query Frame = 0
BLAST of MS016428 vs. ExPASy TrEMBL
Match: A0A0A0LUU9 (NTF2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G064690 PE=4 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 3.8e-53 Identity = 102/125 (81.60%), Postives = 118/125 (94.40%), Query Frame = 0
BLAST of MS016428 vs. ExPASy TrEMBL
Match: A0A1S3B3B7 (nuclear transport factor 2 OS=Cucumis melo OX=3656 GN=LOC103485524 PE=4 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 1.2e-51 Identity = 98/124 (79.03%), Postives = 117/124 (94.35%), Query Frame = 0
BLAST of MS016428 vs. TAIR 10
Match: AT1G11570.2 (NTF2-like ) HSP 1 Score: 169.9 bits (429), Expect = 1.3e-42 Identity = 78/123 (63.41%), Postives = 101/123 (82.11%), Query Frame = 0
BLAST of MS016428 vs. TAIR 10
Match: AT1G27970.1 (nuclear transport factor 2B ) HSP 1 Score: 157.9 bits (398), Expect = 5.2e-39 Identity = 72/121 (59.50%), Postives = 91/121 (75.21%), Query Frame = 0
BLAST of MS016428 vs. TAIR 10
Match: AT1G27970.2 (nuclear transport factor 2B ) HSP 1 Score: 149.4 bits (376), Expect = 1.9e-36 Identity = 68/117 (58.12%), Postives = 87/117 (74.36%), Query Frame = 0
BLAST of MS016428 vs. TAIR 10
Match: AT1G27310.1 (nuclear transport factor 2A ) HSP 1 Score: 145.2 bits (365), Expect = 3.5e-35 Identity = 68/121 (56.20%), Postives = 92/121 (76.03%), Query Frame = 0
BLAST of MS016428 vs. TAIR 10
Match: AT1G11570.1 (NTF2-like ) HSP 1 Score: 132.9 bits (333), Expect = 1.8e-31 Identity = 62/103 (60.19%), Postives = 84/103 (81.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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