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MS016427 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTAACAAATTGAAAGGGATCTACAAAAGTTTCAAGTACATTTCCCAAATCTTCGGTAATGCTTCTGTCTCTTCTCTTTCTCCTCTCTTTTACACCAATTTTCCCCCTAACTTTTCGCTTGGTTCTGGATGATTTGGGACTGATTTGATAAATTGAGACTATTTTAGTGGTGAAAGAGCGAGAGATGGAGATTGGGTATCCGACAGATGTGAAGCATGTGGCACATATTGGGTGGGATGGCCCTTCTGGTACAGCACCCAGTTGGGTACGTTATCACCATCATCTGGTCTCAATATTTTCACTTCCTTATAAAATTTTCTAGTAATGTTCACTTCTTTGCACAATTTAACCATCTGGGTCTCTTTATTTTCCCTTGTTCTGCAGATGAATGAATTCAAATCGGCACCAGAGCATTTCTCAGCCGCATCGTTTGGTGATATTAGTGATAGAAGAGATTCAAGTTCTACGGCTGTAACTGCTCCTACAACATGGTCTTCTCTTGGTACTTTCTGCCATCCTCCATTCTAGCTTCTCTTTCCTTTTAGGATTGCTTCTCTTTGGCAGAAAATACAAGTATAGGATTAGAATAGAAACTGCGGTAGTGGAAAGTGGGAATGCAAGAAATGGTATTGAGAACATGTGCCATTGGAAGGTATTTTCTGTTAGTGGACAAGTGCAAACAGTGGCTTTTCACGGGTTAACCTGTTGAAAACAACAGATAATTTAATGTCTTTTTCATAATTTATTGAATAAAGCTCTATGATATAAGAACAGATTTTGGAGATTCTTTACCCCAGTAGTGGGTTTTTGGCTTTTATGTCACGAGACCACTACTCCTCTGTCTGGGGTAATCTTGGTGCTTATTAGCCTTCGAAAGGAACAAAGTTATATTTTATTTTAAGTTTAAATATTATTTTAGTTCCTTTTAAATTTTGTTCATTTTAGTCCCTATATTTTTAAAACGTCTGTTTTGGTCTCTGTATTGTTTAAAAGTGACTATTTTTGTCCCAAATTTTCATTTTTATCTTATTTATTTCAATCATAATTTTAACCATAGCACTTCACTCCTTAAATTTCTTAAAATATAGCCATAAATTTGTATCAAAGGGTTTCTATTGTGTATAAAATTTGTATTAAAATTTTGCACAAAAAAGACCAAAACGGATGTTAATGAATAAAGTTGGAAGTATAGGGACTGAGATTAACATTTTAGAACTACAAAGACCAAAATGTACCAAAGTCAAAAATACATAAAACAAAATAGGATTTAAACATTTTTTTCAGATGTGGTCCAGGTTCACAATATGATGGCAGATTGATTGCTGGTATGAAAAGACCATGTGGTTGAGTTCAATTGACAAATGTGATATCATCTACCTTTTTCACCTTTTCATGGTTGAATCTACCCAACCCGTGTTAATTAGCCTGATCCACTCCCTAGTCACGTTTTGTCGAGCATGAAATTGCAGTTTAAATACGAAGTTATCGGCCTACTACATCGGAAAATAGTTACTTTAGGTTGAGATGACATTACCATATTCGGGATTTACTCTTTCTTTTCACTTTGCACATTCGACTGTCTATATCTTTTTATCAGCTAGGCATCGATCTCATAATTCTTGGATTTTTTTTGCAAAAAACGCTAAATTTCGATACTGTAATCCTAGTTCTGAACAGTATTTATGGTACTTACTCAGACCTCTTCTTCTCCTCCGGGTCTCCCTTCTAGACGTTGATAGGGGGTTTATAATTTATTGTGAACACTTGATGGAAGTTAGTTGCACATGGTCTGTGATTGGTTTGTTGCTGTGCTGTGCTGTGCCTACATTCTGTTCTGAACTAAAAAAATAATGGTGAATCATTGCTTATCAAGGTTTCTTTATATTTTCGTTTCTGTTAACAGATTTCGATCAAGCAATGTTACGACAACCAGCATCGGACTTGTTTGGCGAACTTCCTCGCACAGAAATTCCCAATCTTCCCACAAAACCAAAGAAGAAGAGTAGAAACTCGTCTCCCAAATCTTCATCATCTTCGTCAAAATCATCTCGAGCATCAAAGACAAAGCATTCCTTCGGCGAAATCAAGATTGCACCCCCCAATTTGCAAGTT ATGTCTAACAAATTGAAAGGGATCTACAAAAGTTTCAAGTACATTTCCCAAATCTTCGTGGTGAAAGAGCGAGAGATGGAGATTGGGTATCCGACAGATGTGAAGCATGTGGCACATATTGGGTGGGATGGCCCTTCTGGTACAGCACCCAGTTGGATGAATGAATTCAAATCGGCACCAGAGCATTTCTCAGCCGCATCGTTTGGTGATATTAGTGATAGAAGAGATTCAAGTTCTACGGCTGTAACTGCTCCTACAACATGGTCTTCTCTTGATTTCGATCAAGCAATGTTACGACAACCAGCATCGGACTTGTTTGGCGAACTTCCTCGCACAGAAATTCCCAATCTTCCCACAAAACCAAAGAAGAAGAGTAGAAACTCGTCTCCCAAATCTTCATCATCTTCGTCAAAATCATCTCGAGCATCAAAGACAAAGCATTCCTTCGGCGAAATCAAGATTGCACCCCCCAATTTGCAAGTT ATGTCTAACAAATTGAAAGGGATCTACAAAAGTTTCAAGTACATTTCCCAAATCTTCGTGGTGAAAGAGCGAGAGATGGAGATTGGGTATCCGACAGATGTGAAGCATGTGGCACATATTGGGTGGGATGGCCCTTCTGGTACAGCACCCAGTTGGATGAATGAATTCAAATCGGCACCAGAGCATTTCTCAGCCGCATCGTTTGGTGATATTAGTGATAGAAGAGATTCAAGTTCTACGGCTGTAACTGCTCCTACAACATGGTCTTCTCTTGATTTCGATCAAGCAATGTTACGACAACCAGCATCGGACTTGTTTGGCGAACTTCCTCGCACAGAAATTCCCAATCTTCCCACAAAACCAAAGAAGAAGAGTAGAAACTCGTCTCCCAAATCTTCATCATCTTCGTCAAAATCATCTCGAGCATCAAAGACAAAGCATTCCTTCGGCGAAATCAAGATTGCACCCCCCAATTTGCAAGTT MSNKLKGIYKSFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGPSGTAPSWMNEFKSAPEHFSAASFGDISDRRDSSSTAVTAPTTWSSLDFDQAMLRQPASDLFGELPRTEIPNLPTKPKKKSRNSSPKSSSSSSKSSRASKTKHSFGEIKIAPPNLQV Homology
BLAST of MS016427 vs. NCBI nr
Match: XP_022140195.1 (CRIB domain-containing protein RIC10-like [Momordica charantia] >XP_022140196.1 CRIB domain-containing protein RIC10-like [Momordica charantia] >XP_022140197.1 CRIB domain-containing protein RIC10-like [Momordica charantia]) HSP 1 Score: 312.4 bits (799), Expect = 2.3e-81 Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0
BLAST of MS016427 vs. NCBI nr
Match: XP_004153657.1 (CRIB domain-containing protein RIC10 isoform X1 [Cucumis sativus] >KGN64546.1 hypothetical protein Csa_013221 [Cucumis sativus]) HSP 1 Score: 275.0 bits (702), Expect = 4.1e-70 Identity = 148/162 (91.36%), Postives = 151/162 (93.21%), Query Frame = 0
BLAST of MS016427 vs. NCBI nr
Match: XP_038893822.1 (CRIB domain-containing protein RIC10-like [Benincasa hispida]) HSP 1 Score: 273.1 bits (697), Expect = 1.5e-69 Identity = 148/162 (91.36%), Postives = 152/162 (93.83%), Query Frame = 0
BLAST of MS016427 vs. NCBI nr
Match: XP_008441384.1 (PREDICTED: CRIB domain-containing protein RIC10-like [Cucumis melo]) HSP 1 Score: 271.9 bits (694), Expect = 3.4e-69 Identity = 146/162 (90.12%), Postives = 150/162 (92.59%), Query Frame = 0
BLAST of MS016427 vs. NCBI nr
Match: XP_023001311.1 (CRIB domain-containing protein RIC10-like isoform X1 [Cucurbita maxima] >XP_023001312.1 CRIB domain-containing protein RIC10-like isoform X1 [Cucurbita maxima] >XP_023001313.1 CRIB domain-containing protein RIC10-like isoform X1 [Cucurbita maxima] >XP_023519033.1 CRIB domain-containing protein RIC10-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023519034.1 CRIB domain-containing protein RIC10-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023519035.1 CRIB domain-containing protein RIC10-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 266.2 bits (679), Expect = 1.9e-67 Identity = 144/162 (88.89%), Postives = 150/162 (92.59%), Query Frame = 0
BLAST of MS016427 vs. ExPASy Swiss-Prot
Match: Q9M0Y9 (CRIB domain-containing protein RIC10 OS=Arabidopsis thaliana OX=3702 GN=RIC10 PE=2 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 1.6e-24 Identity = 79/146 (54.11%), Postives = 93/146 (63.70%), Query Frame = 0
BLAST of MS016427 vs. ExPASy Swiss-Prot
Match: Q0WL69 (CRIB domain-containing protein RIC11 OS=Arabidopsis thaliana OX=3702 GN=RIC11 PE=2 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 5.4e-17 Identity = 70/151 (46.36%), Postives = 91/151 (60.26%), Query Frame = 0
BLAST of MS016427 vs. ExPASy Swiss-Prot
Match: F4J424 (CRIB domain-containing protein RIC5 OS=Arabidopsis thaliana OX=3702 GN=RIC5 PE=1 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 8.7e-15 Identity = 36/58 (62.07%), Postives = 47/58 (81.03%), Query Frame = 0
BLAST of MS016427 vs. ExPASy Swiss-Prot
Match: Q1G3K8 (CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana OX=3702 GN=RIC7 PE=1 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 2.5e-14 Identity = 63/154 (40.91%), Postives = 80/154 (51.95%), Query Frame = 0
BLAST of MS016427 vs. ExPASy Swiss-Prot
Match: Q1PF35 (CRIB domain-containing protein RIC6 OS=Arabidopsis thaliana OX=3702 GN=RIC6 PE=1 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.3e-13 Identity = 61/149 (40.94%), Postives = 73/149 (48.99%), Query Frame = 0
BLAST of MS016427 vs. ExPASy TrEMBL
Match: A0A6J1CG55 (CRIB domain-containing protein RIC10-like OS=Momordica charantia OX=3673 GN=LOC111010922 PE=4 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 1.1e-81 Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0
BLAST of MS016427 vs. ExPASy TrEMBL
Match: A0A0A0LX49 (CRIB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G064680 PE=4 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 2.0e-70 Identity = 148/162 (91.36%), Postives = 151/162 (93.21%), Query Frame = 0
BLAST of MS016427 vs. ExPASy TrEMBL
Match: A0A1S3B2V0 (CRIB domain-containing protein RIC10-like OS=Cucumis melo OX=3656 GN=LOC103485515 PE=4 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 1.7e-69 Identity = 146/162 (90.12%), Postives = 150/162 (92.59%), Query Frame = 0
BLAST of MS016427 vs. ExPASy TrEMBL
Match: A0A6J1KQ58 (CRIB domain-containing protein RIC10-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495480 PE=4 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 9.2e-68 Identity = 144/162 (88.89%), Postives = 150/162 (92.59%), Query Frame = 0
BLAST of MS016427 vs. ExPASy TrEMBL
Match: A0A6J1GSB4 (CRIB domain-containing protein RIC10-like OS=Cucurbita moschata OX=3662 GN=LOC111457070 PE=4 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 1.6e-67 Identity = 141/157 (89.81%), Postives = 148/157 (94.27%), Query Frame = 0
BLAST of MS016427 vs. TAIR 10
Match: AT4G04900.1 (ROP-interactive CRIB motif-containing protein 10 ) HSP 1 Score: 114.0 bits (284), Expect = 1.1e-25 Identity = 79/146 (54.11%), Postives = 93/146 (63.70%), Query Frame = 0
BLAST of MS016427 vs. TAIR 10
Match: AT4G21745.1 (PAK-box/P21-Rho-binding family protein ) HSP 1 Score: 89.0 bits (219), Expect = 3.9e-18 Identity = 70/151 (46.36%), Postives = 91/151 (60.26%), Query Frame = 0
BLAST of MS016427 vs. TAIR 10
Match: AT3G23380.1 (ROP-interactive CRIB motif-containing protein 5 ) HSP 1 Score: 81.6 bits (200), Expect = 6.2e-16 Identity = 36/58 (62.07%), Postives = 47/58 (81.03%), Query Frame = 0
BLAST of MS016427 vs. TAIR 10
Match: AT4G28556.1 (PAK-box/P21-Rho-binding family protein ) HSP 1 Score: 80.1 bits (196), Expect = 1.8e-15 Identity = 63/154 (40.91%), Postives = 80/154 (51.95%), Query Frame = 0
BLAST of MS016427 vs. TAIR 10
Match: AT2G20430.1 (ROP-interactive CRIB motif-containing protein 6 ) HSP 1 Score: 77.8 bits (190), Expect = 8.9e-15 Identity = 61/149 (40.94%), Postives = 73/149 (48.99%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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