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MS016420 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAACATAGCAAACCCAGCACCACATTCTGCAAATTCCTTGAAGAAATGGCTGCAACTGCTCCTGTGGCCATAGGAACTAGAGGCACTGTGGGCTCACTAGTCAAGAAGGAAATTGACTATTTCGCCAAAATTGAGTTTGAAAGATGCAGCGGCAATGACATGGCTTCTTCAAGCCGCCGCAGCAGTTCCCCGCCAACTTTCTGGCATACAGTAATGTCATGGCGAAGGAAGAAGAAGAGAATCGGCAATCGGTTCATCACGAAGATTTGCTCGGCTTTCGATGTCTCGGGAAGCAATCGGCTGAATAAGATTTCTGGGTTCAATTATACGATCCTTCAGAATGATTTCAACAGCTTGCATATG ATGCAACATAGCAAACCCAGCACCACATTCTGCAAATTCCTTGAAGAAATGGCTGCAACTGCTCCTGTGGCCATAGGAACTAGAGGCACTGTGGGCTCACTAGTCAAGAAGGAAATTGACTATTTCGCCAAAATTGAGTTTGAAAGATGCAGCGGCAATGACATGGCTTCTTCAAGCCGCCGCAGCAGTTCCCCGCCAACTTTCTGGCATACAGTAATGTCATGGCGAAGGAAGAAGAAGAGAATCGGCAATCGGTTCATCACGAAGATTTGCTCGGCTTTCGATGTCTCGGGAAGCAATCGGCTGAATAAGATTTCTGGGTTCAATTATACGATCCTTCAGAATGATTTCAACAGCTTGCATATG ATGCAACATAGCAAACCCAGCACCACATTCTGCAAATTCCTTGAAGAAATGGCTGCAACTGCTCCTGTGGCCATAGGAACTAGAGGCACTGTGGGCTCACTAGTCAAGAAGGAAATTGACTATTTCGCCAAAATTGAGTTTGAAAGATGCAGCGGCAATGACATGGCTTCTTCAAGCCGCCGCAGCAGTTCCCCGCCAACTTTCTGGCATACAGTAATGTCATGGCGAAGGAAGAAGAAGAGAATCGGCAATCGGTTCATCACGAAGATTTGCTCGGCTTTCGATGTCTCGGGAAGCAATCGGCTGAATAAGATTTCTGGGTTCAATTATACGATCCTTCAGAATGATTTCAACAGCTTGCATATG MQHSKPSTTFCKFLEEMAATAPVAIGTRGTVGSLVKKEIDYFAKIEFERCSGNDMASSSRRSSSPPTFWHTVMSWRRKKKRIGNRFITKICSAFDVSGSNRLNKISGFNYTILQNDFNSLHM Homology
BLAST of MS016420 vs. NCBI nr
Match: XP_022140128.1 (uncharacterized protein LOC111010862 [Momordica charantia]) HSP 1 Score: 250.8 bits (639), Expect = 6.2e-63 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of MS016420 vs. NCBI nr
Match: KAG7019678.1 (hypothetical protein SDJN02_18641, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 184.5 bits (467), Expect = 5.5e-43 Identity = 96/131 (73.28%), Postives = 108/131 (82.44%), Query Frame = 0
BLAST of MS016420 vs. NCBI nr
Match: KAG6584077.1 (hypothetical protein SDJN03_20009, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 161.0 bits (406), Expect = 6.5e-36 Identity = 85/115 (73.91%), Postives = 95/115 (82.61%), Query Frame = 0
BLAST of MS016420 vs. NCBI nr
Match: XP_016898893.1 (PREDICTED: uncharacterized protein LOC103485409 [Cucumis melo]) HSP 1 Score: 158.7 bits (400), Expect = 3.2e-35 Identity = 81/112 (72.32%), Postives = 91/112 (81.25%), Query Frame = 0
BLAST of MS016420 vs. NCBI nr
Match: KGN64543.2 (hypothetical protein Csa_013063 [Cucumis sativus]) HSP 1 Score: 154.8 bits (390), Expect = 4.7e-34 Identity = 80/112 (71.43%), Postives = 89/112 (79.46%), Query Frame = 0
BLAST of MS016420 vs. ExPASy TrEMBL
Match: A0A6J1CHB1 (uncharacterized protein LOC111010862 OS=Momordica charantia OX=3673 GN=LOC111010862 PE=4 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 3.0e-63 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of MS016420 vs. ExPASy TrEMBL
Match: A0A0A0LX43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063600 PE=4 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 8.8e-39 Identity = 88/128 (68.75%), Postives = 99/128 (77.34%), Query Frame = 0
BLAST of MS016420 vs. ExPASy TrEMBL
Match: A0A1S4DSE9 (uncharacterized protein LOC103485409 OS=Cucumis melo OX=3656 GN=LOC103485409 PE=4 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 1.6e-35 Identity = 81/112 (72.32%), Postives = 91/112 (81.25%), Query Frame = 0
BLAST of MS016420 vs. ExPASy TrEMBL
Match: A0A5A7UTL1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005900 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 7.2e-33 Identity = 78/113 (69.03%), Postives = 87/113 (76.99%), Query Frame = 0
BLAST of MS016420 vs. ExPASy TrEMBL
Match: A0A5N6QB68 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_000249 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 7.0e-28 Identity = 67/122 (54.92%), Postives = 88/122 (72.13%), Query Frame = 0
BLAST of MS016420 vs. TAIR 10
Match: AT4G21780.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 82.8 bits (203), Expect = 2.1e-16 Identity = 48/109 (44.04%), Postives = 65/109 (59.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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